View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11386_low_45 (Length: 274)
Name: NF11386_low_45
Description: NF11386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11386_low_45 |
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Alignment Details
Target: chr3 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 44 - 257
Target Start/End: Original strand, 15994264 - 15994478
Alignment:
| Q |
44 |
atgagtgtagcaataaccactctatagagcatacattaagcaattaaagaatagactatactgcaaaaattatgcagaaagttaatcaccaaatgcctcc |
143 |
Q |
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| T |
15994264 |
atgagtgtagcaataaccattttatagagcaaacattaagcaattaaagaatagactatactgcaaaaattatgcagaaagttaatcaccaaatgccttc |
15994363 |
T |
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| Q |
144 |
aagattaaatagcctttgggaaatacattaacatagacatcctcctgacattgcaatcaaaaaca-actccaatacctcaagtgcacatcctcctcggct |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||| ||||||||||| ||||||||||||| ||| |
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| T |
15994364 |
aagattaaatagcctttgggaaatacattaacatagacatcgtcctggcgttgcaatcaaaaacacactcgaatacctcaagcgcacatcctcctcagct |
15994463 |
T |
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| Q |
243 |
acatcaatacccaac |
257 |
Q |
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||||||||||||||| |
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| T |
15994464 |
acatcaatacccaac |
15994478 |
T |
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