View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11387_high_8 (Length: 241)
Name: NF11387_high_8
Description: NF11387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11387_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 10313224 - 10312984
Alignment:
| Q |
1 |
gtattaaatccatttttaaataatgaaatgatacaattttattcctctcaaaagaatcttatgaagcactacatggttattcccataaaacaaatagggt |
100 |
Q |
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| T |
10313224 |
gtattaaacccatttttaaataatgaaatgatacaattttattcctctcaaaagaatcttatgaagcactacaaggttattcccataaaacaaatagggt |
10313125 |
T |
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| Q |
101 |
tgggtttggatttcatatgcaaaaggaaaaatacttaagtgccgttgtttccaagcaagtacccttataataccgttgtgtgttaaacccaaatatataa |
200 |
Q |
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||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
10313124 |
tgggtttggatttcatatgcaaacgggaaaatacttaagtgccgttgtttccaagcaagtacccttataataccgttgagtgttaaacccaaatatataa |
10313025 |
T |
|
| Q |
201 |
acct-acacactcactcacttgttacaaatacagttcatct |
240 |
Q |
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|||| || ||||||||||||||||||||||||||||||||| |
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| T |
10313024 |
acctaactcactcactcacttgttacaaatacagttcatct |
10312984 |
T |
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