View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11389_low_11 (Length: 470)

Name: NF11389_low_11
Description: NF11389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11389_low_11
NF11389_low_11
[»] chr4 (58 HSPs)
chr4 (20-318)||(18745918-18746215)
chr4 (333-456)||(9516865-9516988)
chr4 (333-456)||(31090316-31090439)
chr4 (335-456)||(9618982-9619103)
chr4 (333-456)||(46046679-46046801)
chr4 (336-456)||(38574223-38574343)
chr4 (334-448)||(9516611-9516725)
chr4 (336-456)||(3018014-3018135)
chr4 (333-442)||(26252506-26252615)
chr4 (333-447)||(48259823-48259938)
chr4 (333-442)||(9396968-9397076)
chr4 (343-456)||(15640726-15640838)
chr4 (333-456)||(3273621-3273745)
chr4 (333-456)||(31943950-31944073)
chr4 (334-448)||(34063983-34064097)
chr4 (334-456)||(35376164-35376285)
chr4 (333-442)||(9619248-9619357)
chr4 (336-456)||(9396702-9396822)
chr4 (336-448)||(35376391-35376502)
chr4 (333-456)||(37012962-37013084)
chr4 (338-456)||(48580121-48580239)
chr4 (336-456)||(7819018-7819137)
chr4 (333-389)||(31218303-31218359)
chr4 (333-448)||(38573969-38574083)
chr4 (402-456)||(26252337-26252391)
chr4 (333-454)||(3273877-3273996)
chr4 (333-442)||(12904747-12904855)
chr4 (333-385)||(41947180-41947232)
chr4 (333-456)||(13132196-13132317)
chr4 (333-388)||(41946965-41947020)
chr4 (333-447)||(3018276-3018388)
chr4 (335-441)||(48260021-48260126)
chr4 (334-442)||(15640984-15641093)
chr4 (399-456)||(34064237-34064294)
chr4 (338-447)||(37012712-37012821)
chr4 (333-441)||(46046430-46046532)
chr4 (333-389)||(20069620-20069676)
chr4 (333-448)||(31090060-31090176)
chr4 (399-456)||(18713026-18713083)
chr4 (333-442)||(31083366-31083475)
chr4 (333-380)||(7819351-7819398)
chr4 (333-380)||(18667621-18667668)
chr4 (333-440)||(31944221-31944328)
chr4 (338-432)||(48579871-48579965)
chr4 (403-448)||(7819277-7819322)
chr4 (399-447)||(18713224-18713272)
chr4 (333-389)||(36887680-36887736)
chr4 (336-454)||(13131943-13132062)
chr4 (333-448)||(31082185-31082299)
chr4 (400-439)||(36699496-36699535)
chr4 (342-389)||(51029095-51029142)
chr4 (338-380)||(4356211-4356253)
chr4 (402-455)||(41947112-41947165)
chr4 (333-374)||(50462733-50462774)
chr4 (400-440)||(36888951-36888991)
chr4 (345-389)||(43313533-43313577)
chr4 (333-385)||(46934071-46934123)
chr4 (333-389)||(53896446-53896502)
[»] chr7 (43 HSPs)
chr7 (333-456)||(28218418-28218541)
chr7 (333-456)||(25772586-25772709)
chr7 (333-456)||(41600213-41600336)
chr7 (333-456)||(20419791-20419915)
chr7 (333-456)||(12006795-12006918)
chr7 (333-456)||(48672534-48672657)
chr7 (333-448)||(28218178-28218294)
chr7 (333-456)||(23704662-23704784)
chr7 (337-456)||(1250461-1250580)
chr7 (333-448)||(20419536-20419651)
chr7 (333-448)||(23704924-23705038)
chr7 (333-456)||(6465855-6465977)
chr7 (333-452)||(20458950-20459068)
chr7 (333-456)||(23383755-23383878)
chr7 (333-441)||(12006541-12006648)
chr7 (333-456)||(20963750-20963871)
chr7 (333-454)||(38879981-38880099)
chr7 (333-442)||(16995200-16995308)
chr7 (333-448)||(38879723-38879839)
chr7 (333-448)||(20458692-20458806)
chr7 (333-441)||(10409644-10409751)
chr7 (333-448)||(20963494-20963610)
chr7 (333-433)||(41599958-41600058)
chr7 (334-429)||(48648263-48648357)
chr7 (399-456)||(10409440-10409497)
chr7 (333-441)||(25772364-25772471)
chr7 (334-448)||(44816832-44816950)
chr7 (334-456)||(7658224-7658342)
chr7 (338-389)||(23258246-23258297)
chr7 (333-441)||(48672277-48672387)
chr7 (402-456)||(31851494-31851548)
chr7 (333-373)||(24195210-24195250)
chr7 (336-456)||(7657972-7658094)
chr7 (333-387)||(23383499-23383553)
chr7 (399-447)||(24194929-24194978)
chr7 (399-448)||(24195059-24195108)
chr7 (399-456)||(48648484-48648541)
chr7 (333-389)||(6466127-6466183)
chr7 (333-385)||(33162862-33162914)
chr7 (346-389)||(14646972-14647015)
chr7 (333-380)||(31852161-31852208)
chr7 (401-433)||(14800934-14800966)
chr7 (401-433)||(15247926-15247958)
[»] chr8 (38 HSPs)
chr8 (333-456)||(10108370-10108493)
chr8 (333-456)||(14820295-14820417)
chr8 (333-441)||(43851665-43851772)
chr8 (333-456)||(5554869-5554992)
chr8 (333-456)||(30789762-30789885)
chr8 (333-447)||(10108634-10108748)
chr8 (333-447)||(14820558-14820672)
chr8 (333-441)||(7689793-7689901)
chr8 (333-448)||(10171406-10171521)
chr8 (333-447)||(21147936-21148051)
chr8 (343-447)||(5555133-5555237)
chr8 (333-456)||(2583320-2583443)
chr8 (333-456)||(7689524-7689646)
chr8 (333-456)||(21148191-21148314)
chr8 (333-442)||(42606022-42606131)
chr8 (338-454)||(30789513-30789628)
chr8 (333-456)||(26136685-26136808)
chr8 (343-454)||(42112995-42113105)
chr8 (333-442)||(43481583-43481693)
chr8 (336-456)||(17623142-17623261)
chr8 (333-385)||(18044153-18044205)
chr8 (333-448)||(17622890-17623002)
chr8 (333-442)||(2583589-2583699)
chr8 (402-448)||(26136948-26136994)
chr8 (399-447)||(14767573-14767621)
chr8 (333-389)||(35367410-35367466)
chr8 (333-456)||(42113239-42113359)
chr8 (333-387)||(20877069-20877123)
chr8 (402-452)||(42605822-42605872)
chr8 (399-448)||(22494647-22494696)
chr8 (333-387)||(26137008-26137062)
chr8 (399-441)||(26532849-26532891)
chr8 (401-439)||(38726755-38726793)
chr8 (333-433)||(14767785-14767882)
chr8 (402-431)||(35367480-35367509)
chr8 (401-442)||(44162731-44162772)
chr8 (333-389)||(1949652-1949708)
chr8 (345-389)||(40487736-40487780)
[»] chr6 (29 HSPs)
chr6 (333-456)||(32017759-32017881)
chr6 (333-456)||(9481182-9481305)
chr6 (333-456)||(24731935-24732061)
chr6 (334-456)||(19284130-19284252)
chr6 (333-448)||(18500315-18500429)
chr6 (336-456)||(26385529-26385649)
chr6 (333-448)||(26385278-26385393)
chr6 (333-448)||(24732201-24732315)
chr6 (338-442)||(9154884-9154989)
chr6 (333-389)||(2299635-2299691)
chr6 (344-388)||(10321744-10321788)
chr6 (333-385)||(18500655-18500707)
chr6 (344-448)||(33714494-33714602)
chr6 (403-456)||(2299564-2299617)
chr6 (333-389)||(2299340-2299396)
chr6 (399-447)||(9481446-9481494)
chr6 (400-452)||(30618029-30618081)
chr6 (399-455)||(33637625-33637681)
chr6 (334-389)||(34884558-34884613)
chr6 (400-454)||(9854144-9854198)
chr6 (333-373)||(30617967-30618007)
chr6 (400-440)||(30618232-30618272)
chr6 (346-389)||(21069527-21069570)
chr6 (341-380)||(30459230-30459269)
chr6 (333-367)||(3229960-3229994)
chr6 (410-456)||(10321986-10322032)
chr6 (400-442)||(17142744-17142786)
chr6 (399-440)||(30458967-30459008)
chr6 (344-380)||(30458911-30458947)
[»] chr2 (46 HSPs)
chr2 (344-456)||(26135828-26135940)
chr2 (333-456)||(26236127-26236250)
chr2 (333-456)||(15106067-15106190)
chr2 (333-456)||(17850841-17850964)
chr2 (333-456)||(19251471-19251593)
chr2 (333-448)||(23806215-23806330)
chr2 (333-442)||(23854688-23854797)
chr2 (333-441)||(17463361-17463469)
chr2 (333-456)||(42670974-42671097)
chr2 (333-456)||(22263446-22263571)
chr2 (333-448)||(26236358-26236472)
chr2 (333-447)||(26560556-26560668)
chr2 (333-439)||(44098894-44099000)
chr2 (333-441)||(15106337-15106443)
chr2 (333-441)||(17850587-17850694)
chr2 (333-456)||(13254497-13254620)
chr2 (337-448)||(30390463-30390574)
chr2 (336-389)||(13254758-13254811)
chr2 (333-454)||(19251727-19251847)
chr2 (333-381)||(23855024-23855072)
chr2 (333-456)||(17463092-17463214)
chr2 (333-452)||(20498747-20498864)
chr2 (333-456)||(39878103-39878225)
chr2 (333-439)||(23046707-23046813)
chr2 (333-389)||(42670717-42670773)
chr2 (333-456)||(34548574-34548696)
chr2 (333-442)||(20499014-20499123)
chr2 (403-456)||(23806022-23806075)
chr2 (399-447)||(22263257-22263305)
chr2 (333-389)||(23047904-23047960)
chr2 (400-456)||(23854921-23854977)
chr2 (334-386)||(26560880-26560932)
chr2 (333-389)||(39878395-39878450)
chr2 (345-387)||(12419046-12419088)
chr2 (345-387)||(12431106-12431148)
chr2 (345-389)||(13284735-13284779)
chr2 (333-385)||(26136143-26136195)
chr2 (345-389)||(30958696-30958740)
chr2 (345-385)||(30959997-30960037)
chr2 (335-379)||(44999354-44999398)
chr2 (346-389)||(33290062-33290105)
chr2 (402-456)||(26560809-26560863)
chr2 (403-448)||(13284671-13284716)
chr2 (402-447)||(42670788-42670833)
chr2 (333-389)||(44097738-44097795)
chr2 (345-389)||(33290369-33290413)
[»] chr5 (36 HSPs)
chr5 (333-456)||(24837424-24837547)
chr5 (333-454)||(23979158-23979279)
chr5 (333-456)||(14411697-14411820)
chr5 (333-456)||(7126172-7126295)
chr5 (333-456)||(14143902-14144024)
chr5 (337-456)||(29444810-29444929)
chr5 (333-447)||(31799640-31799754)
chr5 (334-456)||(41001608-41001729)
chr5 (333-456)||(18336467-18336591)
chr5 (333-441)||(18336726-18336833)
chr5 (333-452)||(17762283-17762401)
chr5 (333-456)||(24074303-24074426)
chr5 (333-448)||(24837169-24837284)
chr5 (333-448)||(17762545-17762660)
chr5 (334-456)||(4919245-4919366)
chr5 (333-447)||(29445070-29445183)
chr5 (333-448)||(30512288-30512402)
chr5 (333-448)||(30552628-30552742)
chr5 (333-454)||(6817123-6817243)
chr5 (333-456)||(24650954-24651077)
chr5 (337-456)||(31799895-31800013)
chr5 (333-447)||(14144165-14144279)
chr5 (338-447)||(7125923-7126031)
chr5 (333-452)||(994005-994123)
chr5 (333-448)||(4918989-4919105)
chr5 (400-456)||(6817376-6817432)
chr5 (347-442)||(41001370-41001462)
chr5 (334-389)||(993751-993806)
chr5 (333-456)||(20709467-20709589)
chr5 (338-456)||(27159212-27159327)
chr5 (333-447)||(27158991-27159104)
chr5 (333-448)||(14411929-14412043)
chr5 (399-454)||(20709278-20709333)
chr5 (335-442)||(24650704-24650809)
chr5 (333-447)||(24074566-24074682)
chr5 (400-442)||(20959360-20959402)
[»] chr3 (54 HSPs)
chr3 (333-456)||(14171841-14171964)
chr3 (333-456)||(19113020-19113143)
chr3 (333-456)||(33372406-33372529)
chr3 (333-448)||(9266975-9267090)
chr3 (333-456)||(14262291-14262414)
chr3 (333-456)||(20853951-20854073)
chr3 (333-456)||(45969915-45970038)
chr3 (333-433)||(19720333-19720433)
chr3 (333-456)||(49986527-49986651)
chr3 (333-456)||(5800605-5800728)
chr3 (333-456)||(14161871-14161994)
chr3 (333-456)||(16721991-16722114)
chr3 (333-456)||(43572389-43572512)
chr3 (333-456)||(45003496-45003619)
chr3 (333-447)||(14262036-14262150)
chr3 (333-456)||(9267230-9267352)
chr3 (333-456)||(30500296-30500418)
chr3 (333-448)||(35995678-35995793)
chr3 (333-447)||(16722255-16722369)
chr3 (333-456)||(11003732-11003855)
chr3 (333-447)||(14162135-14162248)
chr3 (334-456)||(52552943-52553065)
chr3 (333-441)||(33372674-33372782)
chr3 (333-447)||(19112764-19112879)
chr3 (333-448)||(21633159-21633274)
chr3 (333-447)||(5800869-5800982)
chr3 (333-442)||(45970184-45970294)
chr3 (333-456)||(21632901-21633019)
chr3 (333-447)||(30500043-30500155)
chr3 (333-448)||(20853695-20853811)
chr3 (333-389)||(27946187-27946243)
chr3 (333-456)||(35995933-35996053)
chr3 (336-456)||(38283553-38283673)
chr3 (333-448)||(45003759-45003873)
chr3 (333-454)||(4204709-4204829)
chr3 (333-454)||(43572648-43572768)
chr3 (333-441)||(14171587-14171694)
chr3 (336-452)||(17649269-17649384)
chr3 (333-456)||(17465622-17465745)
chr3 (333-388)||(24490242-24490297)
chr3 (338-389)||(27946114-27946165)
chr3 (399-441)||(52552758-52552800)
chr3 (333-389)||(3424774-3424830)
chr3 (399-447)||(15328724-15328772)
chr3 (345-440)||(35740829-35740922)
chr3 (333-389)||(49986850-49986906)
chr3 (345-440)||(36990931-36991025)
chr3 (345-440)||(37016371-37016465)
chr3 (402-456)||(47575527-47575581)
chr3 (333-386)||(3425973-3426026)
chr3 (400-441)||(38283820-38283861)
chr3 (345-389)||(35741906-35741950)
chr3 (399-433)||(45058769-45058803)
chr3 (333-433)||(15328463-15328560)
[»] chr1 (45 HSPs)
chr1 (333-456)||(4907217-4907340)
chr1 (333-456)||(18462286-18462408)
chr1 (333-456)||(24467629-24467751)
chr1 (333-456)||(52058263-52058386)
chr1 (333-442)||(39826315-39826424)
chr1 (333-448)||(39711335-39711450)
chr1 (333-447)||(17606572-17606684)
chr1 (333-448)||(4906962-4907077)
chr1 (333-456)||(8292804-8292927)
chr1 (333-448)||(33628690-33628805)
chr1 (333-452)||(33628949-33629068)
chr1 (333-441)||(39826050-39826158)
chr1 (333-454)||(24467884-24468002)
chr1 (333-456)||(29696565-29696687)
chr1 (333-456)||(30299232-30299354)
chr1 (333-452)||(39711074-39711191)
chr1 (333-456)||(48071961-48072084)
chr1 (333-454)||(52058011-52058132)
chr1 (333-456)||(39970900-39971024)
chr1 (336-456)||(17606307-17606431)
chr1 (333-448)||(30299494-30299609)
chr1 (333-452)||(34749364-34749483)
chr1 (337-442)||(18462553-18462658)
chr1 (335-456)||(43539349-43539470)
chr1 (333-448)||(8293070-8293186)
chr1 (333-442)||(48072230-48072339)
chr1 (333-389)||(18342339-18342395)
chr1 (333-389)||(20995698-20995754)
chr1 (333-448)||(29696821-29696935)
chr1 (333-448)||(34749138-34749252)
chr1 (352-454)||(42510034-42510135)
chr1 (338-387)||(37236723-37236772)
chr1 (333-385)||(27039638-27039690)
chr1 (333-389)||(43539669-43539725)
chr1 (333-440)||(17502001-17502107)
chr1 (333-447)||(20995932-20996045)
chr1 (399-448)||(39970712-39970761)
chr1 (345-385)||(42510341-42510381)
chr1 (333-389)||(43400753-43400809)
chr1 (333-380)||(13230063-13230110)
chr1 (346-389)||(17500782-17500825)
chr1 (338-389)||(26266420-26266471)
chr1 (411-448)||(33628849-33628886)
chr1 (400-432)||(215191-215223)
chr1 (333-389)||(26271207-26271263)
[»] scaffold0117 (1 HSPs)
scaffold0117 (338-456)||(12237-12355)
[»] scaffold0449 (2 HSPs)
scaffold0449 (333-456)||(7454-7578)
scaffold0449 (334-448)||(7227-7341)
[»] scaffold0185 (1 HSPs)
scaffold0185 (333-442)||(3869-3978)
[»] scaffold0361 (2 HSPs)
scaffold0361 (333-452)||(4562-4682)
scaffold0361 (333-448)||(4826-4940)
[»] scaffold0809 (2 HSPs)
scaffold0809 (333-456)||(1411-1533)
scaffold0809 (333-448)||(1673-1784)
[»] scaffold0141 (2 HSPs)
scaffold0141 (333-456)||(8325-8446)
scaffold0141 (345-448)||(8585-8688)
[»] scaffold0176 (2 HSPs)
scaffold0176 (333-389)||(15950-16006)
scaffold0176 (404-456)||(15887-15939)
[»] scaffold0352 (2 HSPs)
scaffold0352 (333-447)||(4667-4781)
scaffold0352 (333-441)||(5948-6057)
[»] scaffold0477 (2 HSPs)
scaffold0477 (345-448)||(5011-5113)
scaffold0477 (333-385)||(4880-4932)
[»] scaffold0881 (3 HSPs)
scaffold0881 (333-380)||(219-266)
scaffold0881 (399-448)||(286-335)
scaffold0881 (411-448)||(379-416)


Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 20 - 318
Target Start/End: Complemental strand, 18746215 - 18745918
Alignment:
Q  20 cttttgtatagtcatatgatatgattcatggtatccatttcactaggaaatgtaccgattgaaattgagaagcaaaattcatgctaatggatcataagga 119  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  18746215 cttttgtatcgtcatatgatatgattcatggtatgcatttcactaggaaatttaccgattgaaattgagaagcaaa-ttcatgctaatggattataagga 18746117  T
Q  120 tgagacaaatatatgtttgatcgacagttcctacttcccccaaatgctgttaaatgcaccaactgataaacattgtcaaccacttataccaacattctct 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18746116 tgagacaaatatatgtttgatcgacagttcctacttcccccaaatgctgctaaatgcaccaactgataaacattgtcaaccacttataccaacattctct 18746017  T
Q  220 tttatagaatccaccaattgaacttatgaatttaagannnnnnnagaagaaaaattatcatgtacatctttgcagttatcaagattcacttgccaaatt 318  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  18746016 tttatagaatccaccaattgaacttatgaatttaagcttttttgagaagaaaaattatcatttacatttttgcagttatcaagattcacttgccaaatt 18745918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 9516988 - 9516865
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||         ||||||||||||||||||||||||||||||||||    
T  9516988 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 9516889  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    |||||||||| |||||||||||||    
T  9516888 ctacttttggtccctcctttcatc 9516865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 31090439 - 31090316
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||||||||||||||||||| || |||| ||||||||          | |||||||||||||||||||||||||||||||    
T  31090439 gggtaaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattctt 31090340  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    |||||||||| |||||||||||||    
T  31090339 ctacttttggtccctcctttcatc 31090316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 335 - 456
Target Start/End: Original strand, 9618982 - 9619103
Alignment:
Q  335 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttct 434  Q
    ||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||||||||||||     
T  9618982 gtaaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttcc 9619081  T
Q  435 acttttggcccctcctttcatc 456  Q
    |||||||| |||||||||||||    
T  9619082 acttttggtccctcctttcatc 9619103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 46046801 - 46046679
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  46046801 gggtaaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 46046703  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||  |||||||||||||    
T  46046702 ccacttttgatccctcctttcatc 46046679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 336 - 456
Target Start/End: Complemental strand, 38574343 - 38574223
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttcta 435  Q
    |||||| || |||||||||||||||||||||||||||| |||||| ||||||||         ||||||||||||||||||||||||||| ||||||| |    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcca 38574244  T
Q  436 cttttggcccctcctttcatc 456  Q
    ||||||| |||||||||||||    
T  38574243 cttttggtccctcctttcatc 38574223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 334 - 448
Target Start/End: Original strand, 9516611 - 9516725
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||         |||||||||||||||| |||||||||| |||||||    
T  9516611 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttc 9516710  T
Q  434 tacttttggcccctc 448  Q
     |||||||| |||||    
T  9516711 cacttttggtccctc 9516725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 3018014 - 3018135
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattcttct 434  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||          ||||||||||||||||||||||||||| |||||||     
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 3018113  T
Q  435 acttttggcccctcctttcatc 456  Q
    |||||||| |||||||||||||    
T  3018114 acttttggtccctcctttcatc 3018135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 26252615 - 26252506
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || |||||         ||||||||||||||||||||||||||| ||||||    
T  26252615 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 26252516  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  26252515 ccacttttgg 26252506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 48259823 - 48259938
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagatt-ct 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||         |||||||||||||||| |||||||||||||| ||    
T  48259823 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagattcct 48259922  T
Q  432 tctacttttggcccct 447  Q
     |||||||||| ||||    
T  48259923 cctacttttggtccct 48259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 9397076 - 9396968
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  9397076 gggtaaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcagattctt 9396978  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  9396977 ccacttttgg 9396968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 343 - 456
Target Start/End: Original strand, 15640726 - 15640838
Alignment:
Q  343 ctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctacttttgg 442  Q
    |||||||||||||||||||||||||||||||||||||| || |||||        | |||||||||||||||||||||||||| ||||||  ||||||||    
T  15640726 ctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaag-atttagattttgtccctgtaatttcatattctttcacttttgg 15640824  T
Q  443 cccctcctttcatc 456  Q
     |||||||||||||    
T  15640825 tccctcctttcatc 15640838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 3273621 - 3273745
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatt-tagattttgtccctgtaatttcagattct 431  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||           || ||||||||||||||||||||||| |||||    
T  3273621 gggtaaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatattct 3273720  T
Q  432 tctacttttggcccctcctttcatc 456  Q
    || |||||||| |||||||||||||    
T  3273721 tccacttttggtccctcctttcatc 3273745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 31943950 - 31944073
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || |||||          ||||||||||||||||||||||||||| |||||    
T  31943950 gggtaaata-ctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattct 31944048  T
Q  432 tctacttttggcccctcctttcatc 456  Q
    || |||||||| | |||||||||||    
T  31944049 tccacttttggtctctcctttcatc 31944073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 334 - 448
Target Start/End: Original strand, 34063983 - 34064097
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    |||||||| ||||||||||||||||||||||| |||||||  ||||| ||||||||         ||||||||||||||| |||||||||||||||||||    
T  34063983 ggtaaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttc 34064082  T
Q  434 tacttttggcccctc 448  Q
     |||||||| |||||    
T  34064083 cacttttggtccctc 34064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 334 - 456
Target Start/End: Original strand, 35376164 - 35376285
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    |||||||| || |||||||||||||||||||||||||||| |||||| ||||||||         ||||||||||||||| ||||||||| |||||||||    
T  35376164 ggtaaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaa-gatttagattttgtctctgtaattttagattcttc 35376262  T
Q  434 tacttttggcccctcctttcatc 456  Q
     |||||||| | |||||||||||    
T  35376263 cacttttggtctctcctttcatc 35376285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 9619357 - 9619248
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||         |||||||||||||||| |||||||||| ||||||    
T  9619357 gggtaaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattctt 9619258  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  9619257 ccacttttgg 9619248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 9396702 - 9396822
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttcta 435  Q
    |||||| |||||||||||||||||||||||||||||| || |||| ||| ||||         |||||||||||||||||| |||||||| ||| ||| |    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttcca 9396801  T
Q  436 cttttggcccctcctttcatc 456  Q
    ||||||| |||||||||||||    
T  9396802 cttttggtccctcctttcatc 9396822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 448
Target Start/End: Complemental strand, 35376502 - 35376391
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttcta 435  Q
    |||||||||||||||||||||||||||||||| |||||| ||||| ||||||||         |||||| |||||||||||||||||||||| ||||| |    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaa-gatttaaattttgtccctgtaatttcagaatcttcca 35376404  T
Q  436 cttttggcccctc 448  Q
    ||||||| |||||    
T  35376403 cttttggtccctc 35376391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 37013084 - 37012962
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||| ||||||||||||||||||||||||||| |||||| ||||||||          | |||||||||||||||||||||||| ||||||    
T  37013084 gggtaaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaa-aaattagattttgtccctgtaatttcatattctt 37012986  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| | |||||||||||    
T  37012985 ccacttttggtcactcctttcatc 37012962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 338 - 456
Target Start/End: Complemental strand, 48580239 - 48580121
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctact 437  Q
    |||| ||||||||||||||||||||||||||||||||||||||  |||   |         ||||||||||||||||||||||||||| ||| ||| |||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttcatattgttccact 48580140  T
Q  438 tttggcccctcctttcatc 456  Q
    ||||| |||||||||||||    
T  48580139 tttggtccctcctttcatc 48580121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 7819018 - 7819137
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttcta 435  Q
    |||||| ||||||||| || | ||||||||||||||||||||||| |||  |||         ||||||||||||||||||||||||||||||||||| |    
T  7819018 taaatacctcttttcgaccatataatattagcgaattccggttttagtca-tgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 7819116  T
Q  436 cttttggcccctcctttcatc 456  Q
    |||||||  ||||||||||||    
T  7819117 cttttggttcctcctttcatc 7819137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 31218359 - 31218303
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  31218359 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 38573969 - 38574083
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| ||||||||||| |||||||| ||||  |||||||        | |||||||||||||||||||||||||| ||||||    
T  38573969 gggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaag-atttagattttgtccctgtaatttcatattctt 38574067  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  38574068 ccacttttggtccctc 38574083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 402 - 456
Target Start/End: Original strand, 26252337 - 26252391
Alignment:
Q  402 ttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  26252337 ttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatc 26252391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 3273996 - 3273877
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||| |||||| |        | ||||||||||| |||||||||||||||||||||    
T  3273996 gggtaaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctataaaaaaaag-atttagattttatccctgtaatttcagattctt 3273899  T
Q  433 ctacttttggcccctcctttca 454  Q
    | |||||||  ||||| |||||    
T  3273898 ccacttttgatccctcatttca 3273877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 442
Target Start/End: Original strand, 12904747 - 12904855
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||| ||||||||          ||||||||||||||| | |||||||||||||||    
T  12904747 gggtaaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaa-aatttagattttgtccttataatttcagattctt 12904845  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  12904846 ccacttttgg 12904855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 41947232 - 41947180
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  41947232 gggtaaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 13132317 - 13132196
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| || ||||||||||||||||||||||||||| || |||| |||| |||        | ||||||||| |||||||||||||||| ||||||    
T  13132317 gggtaaatacctattttcgtccctgtaatattagcgaatttcgattttagtcc-tgtaaaaaaaag-atttagattctgtccctgtaatttcatattctt 13132220  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||| ||||||||    
T  13132219 ccacttttggtcccttctttcatc 13132196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 388
Target Start/End: Original strand, 41946965 - 41947020
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctg 388  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||    
T  41946965 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 3018388 - 3018276
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||||||||||||||||||||||||||| |||||| ||||||| ||||||||         |||||||| ||||||| ||||||||||||||||     
T  3018388 gggttaatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaa-gatttaga-tttgtccgtgtaatttcagattcta 3018291  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  3018290 ccacttttggtccct 3018276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 335 - 441
Target Start/End: Complemental strand, 48260126 - 48260021
Alignment:
Q  335 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttct 434  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||  || ||||         ||||||||||||||||||||||||||| |||||||     
T  48260126 gtaaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaaaaaa-gatttagattttgtccctgtaatttcaaattcttcc 48260028  T
Q  435 acttttg 441  Q
    |||||||    
T  48260027 acttttg 48260021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 442
Target Start/End: Complemental strand, 15641093 - 15640984
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||| |||||||||||| ||||||||||| |||||||||||||  | |||||          |||||||||| |||||||||||||||||||||||    
T  15641093 ggtaaatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattctt 15640994  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  15640993 ccacttttgg 15640984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 456
Target Start/End: Complemental strand, 34064294 - 34064237
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    ||||||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttggtcccttctttcatc 34064237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 37012712 - 37012821
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctact 437  Q
    |||| |||||||||||| ||||||||||||||||||   |||  |||| |||         ||||||||||||||||||||||||||||||||||| |||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 37012811  T
Q  438 tttggcccct 447  Q
    ||||| ||||    
T  37012812 tttggtccct 37012821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 46046430 - 46046532
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| || |||||||||||||||||||||||||||||| |||| ||||||||          |  ||||||||||||||||||||||| ||||||    
T  46046430 gggtaaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa------aaatagattttgtccctgtaatttcatattctt 46046523  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  46046524 ccacttttg 46046532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 20069676 - 20069620
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||    
T  20069676 gggtaaatatcccttttcgtccctgtaatatgagcgaattccagttttggtccctgt 20069620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 31090060 - 31090176
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattct 431  Q
    |||||||||  |||||| |||||||||||||||| ||||| || |||| ||||||||          ||||||||||||||||||||||||||| |||||    
T  31090060 gggtaaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 31090159  T
Q  432 tctacttttggcccctc 448  Q
    || |||||||| |||||    
T  31090160 tccacttttggtccctc 31090176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 456
Target Start/End: Original strand, 18713026 - 18713083
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    ||||||||||||||||||||||||||| ||| ||| | |||||| |||||||||||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctcctttcatc 18713083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 31083475 - 31083366
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||| || || ||          ||||||||||||||||| | |||| ||||||||    
T  31083475 gggtaaatgtcccttttcgtccctgtaatatgagcgaattccggttttggttccagtaaaaaataaaatttagattttgtccctatcatttgagattctt 31083376  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  31083375 ccacttttgg 31083366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 7819398 - 7819351
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggtttt 380  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||||    
T  7819398 gggtaaatatcttttttcgtcccggtaatattagcgaatttcggtttt 7819351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 18667668 - 18667621
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggtttt 380  Q
    |||| |||| |||||||||||||||||||||||||||||||| |||||    
T  18667668 gggttaatacctcttttcgtccctgtaatattagcgaattccagtttt 18667621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 440
Target Start/End: Complemental strand, 31944328 - 31944221
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  ||||||||||| ||||||||||||||||| ||||||| ||| ||||          | ||||||||||||| |||||||||| ||||||    
T  31944328 gggtaaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattctt 31944229  T
Q  433 ctactttt 440  Q
    | ||||||    
T  31944228 ccactttt 31944221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 338 - 432
Target Start/End: Original strand, 48579871 - 48579965
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| ||||||||||||||||||||||| |||| | ||||||| |||  |||         ||||||||||||||| ||||||||||||||||||    
T  48579871 aatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattctt 48579965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 7819322 - 7819277
Alignment:
Q  403 tagattttgtccctgtaatttcagattcttctacttttggcccctc 448  Q
    ||||||||||||||||||| ||||||||||| |||||||| |||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctc 7819277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 18713272 - 18713224
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccct 447  Q
    ||||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  18713272 gatttagattttgtctctgtaatttcagattcttccagttttggtccct 18713224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 36887680 - 36887736
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||| ||||||| ||||||||||||||||||||||  |||||| ||||||||    
T  36887680 gggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgt 36887736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 336 - 454
Target Start/End: Original strand, 13131943 - 13132062
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattcttct 434  Q
    |||||| |||||||||||| |||||||||| |||||| | ||||| ||||||||          |||||||||| ||| | ||||||||||||||||||     
T  13131943 taaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattcttcc 13132042  T
Q  435 acttttggcccctcctttca 454  Q
    |||||||  ||||| |||||    
T  13132043 acttttgatccctcatttca 13132062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 31082185 - 31082299
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| | |||||||||||| |||||| |||||||||| | ||| ||||||||         | |||||||| ||||||| | |||| ||||||||    
T  31082185 gggtaaataccccttttcgtccctataatatgagcgaattccaggtttggtccctgtaaaaaaaaag-tttagattctgtccctatcatttgagattctt 31082283  T
Q  433 ctacttttggcccctc 448  Q
    | ||||||||||||||    
T  31082284 ccacttttggcccctc 31082299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 400 - 439
Target Start/End: Complemental strand, 36699535 - 36699496
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctacttt 439  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  36699535 atttagattatgtccctgtaattttagattcttctacttt 36699496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 389
Target Start/End: Complemental strand, 51029142 - 51029095
Alignment:
Q  342 tctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||||||| ||||||||||||| |||||||| ||||||| ||||||||    
T  51029142 tctcttttggtccctgtaatatgagcgaatttcggttttagtccctgt 51029095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 380
Target Start/End: Complemental strand, 4356253 - 4356211
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggtttt 380  Q
    |||| |||||||| ||||||||||||||||||||| |||||||    
T  4356253 aatacctcttttcatccctgtaatattagcgaatttcggtttt 4356211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 455
Target Start/End: Complemental strand, 41947165 - 41947112
Alignment:
Q  402 ttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcat 455  Q
    ||||||||||||| |||||||||| ||| ||| |||||||| |||| |||||||    
T  41947165 ttagattttgtccttgtaatttcatatttttccacttttggtccctgctttcat 41947112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 374
Target Start/End: Complemental strand, 50462774 - 50462733
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattcc 374  Q
    |||| |||| ||||||| ||||||||||||||||||||||||    
T  50462774 gggttaatacctcttttggtccctgtaatattagcgaattcc 50462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 36888991 - 36888951
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctactttt 440  Q
    ||||||||| ||||||||||||||||||||| || ||||||    
T  36888991 atttagattatgtccctgtaatttcagattcctccactttt 36888951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 43313577 - 43313533
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||| ||| ||||||||||||||||||| |||||| ||||||||    
T  43313577 cttttggtctctgtaatattagcgaattctggttttagtccctgt 43313533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 46934071 - 46934123
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    |||| |||||| ||||| ||||||||||||||| | |||||||||||| ||||    
T  46934071 gggttaatatcacttttggtccctgtaatattaacaaattccggttttagtcc 46934123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 53896446 - 53896502
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||| |||||||  || ||||||||| |||||||||||||||| ||||||||    
T  53896446 gggttaatacctcttttgatcgctgtaatatgagcgaattccggttttagtccctgt 53896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 28218541 - 28218418
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  28218541 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 28218442  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  28218441 ccacttttggtccctcctttcatc 28218418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 25772709 - 25772586
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  25772709 gggtaaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 25772610  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    |||||||||| |||||||||||||    
T  25772609 ctacttttggtccctcctttcatc 25772586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 41600336 - 41600213
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  41600336 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 41600237  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  41600236 ccacttttggtccctcctttcatc 41600213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 20419915 - 20419791
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||||          |||||||||||||||||||||||||||||||||    
T  20419915 gggtaaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 20419816  T
Q  432 tctacttttggcccctcctttcatc 456  Q
    ||||||||||| |||||||||||||    
T  20419815 tctacttttggtccctcctttcatc 20419791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 12006918 - 12006795
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||| | |||||||||||||||||||| |||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  12006918 gggtaaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 12006819  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  12006818 ccacttttggtccctcctttcatc 12006795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 48672657 - 48672534
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||| ||||||||         |||||||||||| |||||||||||||||||||||    
T  48672657 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattctt 48672558  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  48672557 ccacttttggtccctcctttcatc 48672534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 28218178 - 28218294
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||||||||||||    
T  28218178 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 28218277  T
Q  432 tctacttttggcccctc 448  Q
    || |||||||| |||||    
T  28218278 tccacttttggtccctc 28218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 23704662 - 23704784
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||  || ||||        | ||||| |||||||||||||||||||||||||||    
T  23704662 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgtaaaaaaaag-atttacattttgtccctgtaatttcagattctt 23704760  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  23704761 ccacttttggtccctcctttcatc 23704784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 337 - 456
Target Start/End: Complemental strand, 1250580 - 1250461
Alignment:
Q  337 aaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctac 436  Q
    |||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||         |||||||||||||||||| |||||||| ||||||| ||    
T  1250580 aaatatctcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccac 1250481  T
Q  437 ttttggcccctcctttcatc 456  Q
    |||||| |||||||||||||    
T  1250480 ttttggtccctcctttcatc 1250461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 20419536 - 20419651
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  20419536 gggtaaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 20419635  T
Q  433 ctacttttggcccctc 448  Q
    | | |||||| |||||    
T  20419636 ccatttttggtccctc 20419651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 23705038 - 23704924
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  23705038 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctt 23704940  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  23704939 ccacttttggtccctc 23704924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 6465855 - 6465977
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||          ||||||||| ||| | |||||||||||||||||    
T  6465855 gggtaaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaa-tatttagattatgttcttgtaatttcagattctt 6465953  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  6465954 ccacttttggtccctcctttcatc 6465977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 20459068 - 20458950
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||  || |||||         ||||||||||||||| ||||||||||||||||||    
T  20459068 gggtaaatacctcttttcgtccctgtaatattagggaattccggttta-gtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattctt 20458970  T
Q  433 ctacttttggcccctccttt 452  Q
    | |||||||| |||||||||    
T  20458969 ccacttttggtccctccttt 20458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 23383878 - 23383755
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||| |||||| | |||| |||||||          ||||||||||||||||||||||||||| ||||||    
T  23383878 gggtaaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23383779  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | || ||||| |||||||||||||    
T  23383778 ccacctttggtccctcctttcatc 23383755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 12006541 - 12006648
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||          | |||||||||||||||||||||||||||||||    
T  12006541 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-aaattagattttgtccctgtaatttcagattctt 12006639  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  12006640 ccacttttg 12006648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 20963871 - 20963750
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||          |||||||||| ||||||||||||||||||||||    
T  20963871 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataa-aatttagatttagtccctgtaatttcagattctt 20963773  T
Q  433 ctacttttggcccctcctttcatc 456  Q
      ||||||||  ||||||||||||    
T  20963772 tcacttttgg-tcctcctttcatc 20963750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 38880099 - 38879981
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||| |||    |          |||||||||||||||||||||||||||||||||    
T  38880099 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttagtct---ttaaaaaaaaaatttagattttgtccctgtaatttcagattctt 38880003  T
Q  433 ctacttttggcccctcctttca 454  Q
    | |||||||| |||||||||||    
T  38880002 ccacttttggtccctcctttca 38879981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 442
Target Start/End: Original strand, 16995200 - 16995308
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||| |||||||||||||||||| ||||||| || |||||          |||||||||||||||||||||||||||||||||    
T  16995200 gggtaaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaat-atttagattttgtccctgtaatttcagattctt 16995298  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  16995299 ccacttttgg 16995308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 38879723 - 38879839
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||| || |||||          ||||||||||||||||||||||||||| |||||    
T  38879723 gggtaaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 38879822  T
Q  432 tctacttttggcccctc 448  Q
    || |||||||| |||||    
T  38879823 tccacttttggtccctc 38879839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 20458692 - 20458806
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  | |||||||||||||||||||| |||||||||||||| ||||||||          |||||||||||||| ||||||||||||||||||    
T  20458692 gggtaaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaa-aatttagattttgtcgctgtaatttcagattctt 20458790  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  20458791 ccacttttggtccctc 20458806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 10409751 - 10409644
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||| ||| |||||||||||||||||||| |||| ||||||||         ||||||||||||||| ||||||||| ||||||||    
T  10409751 gggtaaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtctctgtaattttagattctt 10409653  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  10409652 ccacttttg 10409644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 20963494 - 20963610
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    |||||||||||| ||||||||||||||||||||| ||||||  ||||| ||||||||          ||||||||||| ||||||||||||| |||||||    
T  20963494 gggtaaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattct 20963593  T
Q  432 tctacttttggcccctc 448  Q
    || |||||||| |||||    
T  20963594 tccacttttggtccctc 20963610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 433
Target Start/End: Original strand, 41599958 - 41600058
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||| |||| | |          |||||||||||||||||||||||||||||||||    
T  41599958 gggtaaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattctt 41600057  T
Q  433 c 433  Q
    |    
T  41600058 c 41600058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 334 - 429
Target Start/End: Original strand, 48648263 - 48648357
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagatt 429  Q
    |||||||||||||||||||||||||||||| |||||||| || |||| |||| |||         |||||||||||||||||||||||||||||||    
T  48648263 ggtaaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgtaagaaaaa-gatttagattttgtccctgtaatttcagatt 48648357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 456
Target Start/End: Original strand, 10409440 - 10409497
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    |||||||||||||||| ||||||||||||||||||||||||| | |||| ||||||||    
T  10409440 gatttagattttgtccttgtaatttcagattcttctacttttagtcccttctttcatc 10409497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 25772364 - 25772471
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||| || |||| ||  ||||         |||||||||||||||| |||||||||| ||||||    
T  25772364 gggtaaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgtaaaaaaaa-gatttagattttgtccttgtaatttcatattctt 25772462  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  25772463 ccacttttg 25772471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 448
Target Start/End: Original strand, 44816832 - 44816950
Alignment:
Q  334 ggtaaatatctcttttc--gtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng--gatttagattttgtccctgtaatttcagatt 429  Q
    |||||||| ||||||||  |||||||||||||||||||||| ||||||| ||| ||||           ||||| |||||||||||||||||||||||||    
T  44816832 ggtaaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagatt 44816931  T
Q  430 cttctacttttggcccctc 448  Q
    |||| |||||||| |||||    
T  44816932 cttccacttttggtccctc 44816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 456
Target Start/End: Complemental strand, 7658342 - 7658224
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    |||||||| ||||||||||||||||||||||| |||||| ||||||| ||| ||||          |   |||||||||||||||||||| |||||||||    
T  7658342 ggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgtaaaaaa----aaaaagattttgtccctgtaatttaagattcttc 7658247  T
Q  434 tacttttggcccctcctttcatc 456  Q
     |||||||| | |||||||||||    
T  7658246 cacttttggtctctcctttcatc 7658224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 389
Target Start/End: Complemental strand, 23258297 - 23258246
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  23258297 aatatctcttttggtctctgtaatattagcgaattccggttttggtccctgt 23258246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 48672277 - 48672387
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt--nnnnnnnnggatttagattttgtccctgtaatttcagattc 430  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||||| ||| ||||           ||||||||||| ||| ||||||||||||||||    
T  48672277 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcagattc 48672376  T
Q  431 ttctacttttg 441  Q
    ||| |||||||    
T  48672377 ttccacttttg 48672387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 402 - 456
Target Start/End: Complemental strand, 31851548 - 31851494
Alignment:
Q  402 ttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    |||||||||||||||||||||||| ||||||| |||||||| | |||||||||||    
T  31851548 ttagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatc 31851494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 373
Target Start/End: Complemental strand, 24195250 - 24195210
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattc 373  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  24195250 gggtaaatacctcttttcgtccctgtaatattagcgaattc 24195210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 7657972 - 7658094
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt--nnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||  |||||||           |||||||||| ||||| |||||||||| ||||||     
T  7657972 taaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgtaaaaaaaaaaagatttagattatgtccatgtaatttcaaattctta 7658071  T
Q  434 tacttttggcccctcctttcatc 456  Q
     |||||||| || ||||||||||    
T  7658072 cacttttggtccatcctttcatc 7658094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 387
Target Start/End: Original strand, 23383499 - 23383553
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccct 387  Q
    |||||||||  |||||||||| |||||||||||| ||||||||||||| ||||||    
T  23383499 gggtaaatacttcttttcgtctctgtaatattagtgaattccggttttagtccct 23383553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 24194929 - 24194978
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttct-acttttggcccct 447  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  24194929 gatttagattttgtccctgtaatttcagattcctctcacttttggtccct 24194978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 24195108 - 24195059
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctc 448  Q
    |||||||||||||||| |||||||||| ||||||| |||||||| |||||    
T  24195108 gatttagattttgtccttgtaatttcatattcttccacttttggtccctc 24195059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 456
Target Start/End: Complemental strand, 48648541 - 48648484
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    |||||||||||||||  |||||||| ||||||||| |||| ||| |||||||||||||    
T  48648541 gatttagattttgtctatgtaattttagattcttccacttctggtccctcctttcatc 48648484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 6466183 - 6466127
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||||||||||| ||  |||||||||||||||||| ||||||| ||| ||||    
T  6466183 gggtaaatatctctttttgtatctgtaatattagcgaatttcggttttagtctctgt 6466127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 33162914 - 33162862
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    ||||||||| ||||||||||| |||||||||||||||||| | ||||| ||||    
T  33162914 gggtaaatacctcttttcgtctctgtaatattagcgaatttctgttttagtcc 33162862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 389
Target Start/End: Complemental strand, 14647015 - 14646972
Alignment:
Q  346 ttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||    
T  14647015 ttttagtccctgtaatatgagcgaattccggttttagtccctgt 14646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 31852208 - 31852161
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggtttt 380  Q
    |||| |||| ||||||||||||||||||||||| |||||| |||||||    
T  31852208 gggttaatacctcttttcgtccctgtaatattaacgaatttcggtttt 31852161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 433
Target Start/End: Complemental strand, 14800966 - 14800934
Alignment:
Q  401 tttagattttgtccctgtaatttcagattcttc 433  Q
    |||||||||||||||||| ||||||||||||||    
T  14800966 tttagattttgtccctgtcatttcagattcttc 14800934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 401 - 433
Target Start/End: Complemental strand, 15247958 - 15247926
Alignment:
Q  401 tttagattttgtccctgtaatttcagattcttc 433  Q
    |||||||||||||||||| ||||||||||||||    
T  15247958 tttagattttgtccctgtcatttcagattcttc 15247926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 6e-35; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 10108370 - 10108493
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  10108370 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108469  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  10108470 ccacttttggtccctcctttcatc 10108493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 14820295 - 14820417
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| || |||||        | |||||||||||||||||||||||||| ||||||    
T  14820295 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaaaaaaag-atttagattttgtccctgtaatttcatattctt 14820393  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  14820394 ccacttttggtccctcctttcatc 14820417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 43851665 - 43851772
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  43851665 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaacaaaa-gatttagattttgtccctgtaatttcagattctt 43851763  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  43851764 ccacttttg 43851772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 5554869 - 5554992
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         |||| ||||||||||||| |||||||| ||||||    
T  5554869 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattctt 5554968  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||| ||||||||    
T  5554969 ccacttttggtcccttctttcatc 5554992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 30789885 - 30789762
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  30789885 gggtaaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 30789786  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| || || |||||||    
T  30789785 ccacttttggtccatcgtttcatc 30789762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 10108748 - 10108634
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  10108748 gggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 10108649  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  10108648 ccacttttggtccct 10108634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 14820672 - 14820558
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  14820672 gggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 14820573  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  14820572 ccacttttggtccct 14820558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 7689901 - 7689793
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| |||| |||         |||||| |||||||||||||||||||||||||||    
T  7689901 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattctt 7689802  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  7689801 ccacttttg 7689793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 10171521 - 10171406
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||| ||||||||    
T  10171521 gggtaaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattctt 10171422  T
Q  433 ctacttttggcccctc 448  Q
      |||||||| |||||    
T  10171421 tcacttttggtccctc 10171406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 21147936 - 21148051
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||||||||||||    
T  21147936 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 21148035  T
Q  432 tctacttttggcccct 447  Q
    || |||||||| ||||    
T  21148036 tccacttttggtccct 21148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 447
Target Start/End: Complemental strand, 5555237 - 5555133
Alignment:
Q  343 ctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctacttttgg 442  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||         ||||||||||||||||||||||||||| ||||||| ||||||||    
T  5555237 ctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttgg 5555138  T
Q  443 cccct 447  Q
     ||||    
T  5555137 tccct 5555133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 2583320 - 2583443
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||| | ||||||||||||||||||| || |||| || | |||         |||||||||||||||||||||||||| |||||||    
T  2583320 gggtaaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattctt 2583419  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    |||||||||  |||||||||||||    
T  2583420 ctacttttgatccctcctttcatc 2583443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 7689524 - 7689646
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||| |||| |||         |||||||| ||||||| |||||||||||||||||    
T  7689524 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttaga-tttgtccttgtaatttcagattctt 7689622  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| ||||| |||||||    
T  7689623 ccacttttggtccctcttttcatc 7689646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 21148314 - 21148191
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||          | ||||||||||||| |||||||||| ||||||    
T  21148314 gggtaaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattctt 21148215  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||| | |||||||||||||    
T  21148214 ccacttttagtccctcctttcatc 21148191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 42606131 - 42606022
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||| |||  |||         ||||||||||||||||| ||||||||| ||||||    
T  42606131 gggtaaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattctt 42606032  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  42606031 ccacttttgg 42606022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 338 - 454
Target Start/End: Original strand, 30789513 - 30789628
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctact 437  Q
    ||||| |||||||||||||||||||||||||||||||| |||| ||||||||         ||||||||||||||| |||||||||||||||| || |||    
T  30789513 aatatgtcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattttgtctctgtaatttcagattcctccact 30789611  T
Q  438 tttggcccctcctttca 454  Q
    ||||  ||||| |||||    
T  30789612 tttgatccctcatttca 30789628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 26136685 - 26136808
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| |||||||||| ||||||||||||||||||||| ||||| ||||||||          ||||||||||||||| |||||||||||||||||    
T  26136685 gggtgaatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattctt 26136784  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | | |||||   ||||||||||||    
T  26136785 ccaattttgattcctcctttcatc 26136808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 454
Target Start/End: Original strand, 42112995 - 42113105
Alignment:
Q  343 ctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctacttttgg 442  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||         |||||||||| |||||||||||||| ||||||||  ||||||||    
T  42112995 ctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaa-gatttagattatgtccctgtaatttaagattctttcacttttgg 42113093  T
Q  443 cccctcctttca 454  Q
     ||||| |||||    
T  42113094 tccctcatttca 42113105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 43481693 - 43481583
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||          |||||| |||||||||||||||||||| |||||    
T  43481693 gggtaaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattct 43481594  T
Q  432 tctacttttgg 442  Q
    || ||| ||||    
T  43481593 tccactcttgg 43481583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 456
Target Start/End: Complemental strand, 17623261 - 17623142
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttcta 435  Q
    |||||| |||||||| |||||||||||||||| ||||| |||||| || |||||        | ||||||||||||||| |||||||||| ||||||| |    
T  17623261 taaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgtaaaaaaaag-atttagattttgtccttgtaatttcaaattcttcca 17623163  T
Q  436 cttttggcccctcctttcatc 456  Q
    ||||||| | |||||||||||    
T  17623162 cttttggtcactcctttcatc 17623142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 18044205 - 18044153
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  18044205 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 18044153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 17622890 - 17623002
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| ||||||||||||||||| | ||||| ||||||||         ||||||||||||||  ||||||||| ||||||||    
T  17622890 gggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgtaaaaaaa--gatttagattttgt-tctgtaattttagattctt 17622986  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  17622987 ccacttttggtccctc 17623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 2583699 - 2583589
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||||||||||||||||  |||||||||||||||||  ||||| | ||||||          |||||| ||||||||||| ||||||||||||||    
T  2583699 gggtaaatatctcttttcgtcctcgtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagattct 2583600  T
Q  432 tctacttttgg 442  Q
    || ||||||||    
T  2583599 tccacttttgg 2583589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 26136994 - 26136948
Alignment:
Q  402 ttagattttgtccctgtaatttcagattcttctacttttggcccctc 448  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||    
T  26136994 ttagattttgtccctgtaatttcagattcttccacttttggtccctc 26136948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 14767573 - 14767621
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccct 447  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  14767573 gatttagattttgtccctgtaatttcagatttttccacttttggtccct 14767621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 35367410 - 35367466
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||||||||  |||||||    
T  35367410 gggtaaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgt 35367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 42113359 - 42113239
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  |||||||||||||||||||||| |||||| ||||||| || |||||          | ||||||| ||||||| |||||||| ||||||    
T  42113359 gggtaaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgtaaaaaaa---aattagattatgtccctttaatttcaaattctt 42113263  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||  |||||||||||||    
T  42113262 ccacttttgatccctcctttcatc 42113239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 20877123 - 20877069
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccct 387  Q
    |||| |||| ||||||| ||||||||||||| |||||||||||||||| ||||||    
T  20877123 gggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 452
Target Start/End: Original strand, 42605822 - 42605872
Alignment:
Q  402 ttagattttgtccctgtaatttcagattcttctacttttggcccctccttt 452  Q
    ||||||||| |||||||||||||| ||||||| |||||||| |||||||||    
T  42605822 ttagattttatccctgtaatttcatattcttccacttttggtccctccttt 42605872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 22494696 - 22494647
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctc 448  Q
    |||||||| |||||||||||||||||| ||||||| |||||||| |||||    
T  22494696 gatttagaatttgtccctgtaatttcaaattcttccacttttggtccctc 22494647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 387
Target Start/End: Complemental strand, 26137062 - 26137008
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccct 387  Q
    ||||||||| | |||||||||||||||||||||| ||||| | ||||| ||||||    
T  26137062 gggtaaataccacttttcgtccctgtaatattagtgaatttcagttttagtccct 26137008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 441
Target Start/End: Original strand, 26532849 - 26532891
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttg 441  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||    
T  26532849 gatttagattttgtccctgtaatttcaaatttttccacttttg 26532891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 439
Target Start/End: Original strand, 38726755 - 38726793
Alignment:
Q  401 tttagattttgtccctgtaatttcagattcttctacttt 439  Q
    |||||||||||||| |||||||||||||||||| |||||    
T  38726755 tttagattttgtccttgtaatttcagattcttccacttt 38726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 433
Target Start/End: Complemental strand, 14767882 - 14767785
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||| |||||||||||||  |||| || |||| ||||||||          | |||||||||||||||||||||||| ||||||    
T  14767882 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcatattctt 14767786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 431
Target Start/End: Original strand, 35367480 - 35367509
Alignment:
Q  402 ttagattttgtccctgtaatttcagattct 431  Q
    ||||||||||||||||||||||||||||||    
T  35367480 ttagattttgtccctgtaatttcagattct 35367509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 442
Target Start/End: Original strand, 44162731 - 44162772
Alignment:
Q  401 tttagattttgtccctgtaatttcagattcttctacttttgg 442  Q
    |||| ||||||| ||||| |||||||||||||||||||||||    
T  44162731 tttacattttgttcctgtcatttcagattcttctacttttgg 44162772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 1949652 - 1949708
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||| ||||||| ||||||||||||| | |||||||||||||| || |||||    
T  1949652 gggttaatacctcttttggtccctgtaatatgatcgaattccggttttagtgcctgt 1949708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 40487780 - 40487736
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||| |||| ||||||||||||||||||| ||||| ||||||||    
T  40487780 cttttggtccttgtaatattagcgaattccagttttagtccctgt 40487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 6e-35; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 32017881 - 32017759
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  32017881 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctt 32017783  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  32017782 ccacttttggtccctcctttcatc 32017759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 9481182 - 9481305
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||        ||||||||||| |||||||||||||||| ||||||    
T  9481182 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 9481281  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | | |||||| |||||||||||||    
T  9481282 ccaattttggtccctcctttcatc 9481305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 24731935 - 24732061
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggat---ttagattttgtccctgtaatttcagatt 429  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||          |    ||||||||||||||||||||||||||||    
T  24731935 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcagatt 24732034  T
Q  430 cttctacttttggcccctcctttcatc 456  Q
    ||||||||||||| |||||||||||||    
T  24732035 cttctacttttggtccctcctttcatc 24732061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 334 - 456
Target Start/End: Original strand, 19284130 - 19284252
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    |||||||| |||||||||| | ||||||||||||||||||| ||||| ||||  ||         |||||||||||||||||||||||||||||||||||    
T  19284130 ggtaaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttc 19284229  T
Q  434 tacttttggcccctcctttcatc 456  Q
     |||||||| |||||||||||||    
T  19284230 cacttttggtccctcctttcatc 19284252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 18500315 - 18500429
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  18500315 gggtaaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgtaagaaaaa-gatttagattttgtccctgtaatttcatattctt 18500413  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  18500414 ccacttttggtccctc 18500429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 336 - 456
Target Start/End: Complemental strand, 26385649 - 26385529
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttcta 435  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| ||||||||         ||||||||| |||| |||| ||||||| ||||||| |    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttcca 26385550  T
Q  436 cttttggcccctcctttcatc 456  Q
    ||||||| | |||||||||||    
T  26385549 cttttggtctctcctttcatc 26385529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 26385278 - 26385393
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||| |||| |||         ||||||||||||||||||||||||| | ||||||    
T  26385278 gggtaaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattctt 26385377  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  26385378 ccacttttggtccctc 26385393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 24732315 - 24732201
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||||||||||   ||| ||||||||         |||||||||||||||| |||||||||| ||||||    
T  24732315 gggtaaatacctcttttcgtccctgtaatattagcgaattcc-aatttagtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattctt 24732217  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  24732216 ccacttttggtccctc 24732201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 442
Target Start/End: Original strand, 9154884 - 9154989
Alignment:
Q  338 aatatctcttttcgtccctgtaatatt-agcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctac 436  Q
    |||| |||||||| ||||||||||||| ||||||||||| |||| ||||||||         ||||||||||||||||||||||||||||||||||| |     
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccag 9154983  T
Q  437 ttttgg 442  Q
    ||||||    
T  9154984 ttttgg 9154989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 2299691 - 2299635
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||    
T  2299691 gggtaaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 10321744 - 10321788
Alignment:
Q  344 tcttttcgtccctgtaatattagcgaattccggttttcgtccctg 388  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  10321744 tcttttcgtccctgtaatattagcgaattccggttttagtccctg 10321788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 18500707 - 18500655
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||    
T  18500707 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 344 - 448
Target Start/End: Original strand, 33714494 - 33714602
Alignment:
Q  344 tcttttcgtccctgtaatattagcgaattccggttt--tcgtccctgt--nnnnnnnnggatttagattttgtccctgtaatttcagattcttctacttt 439  Q
    ||||||||||||||||||||||||||||||||||||  | ||||||||           |||||||||||||||| |||||||||| ||||||| |||||    
T  33714494 tcttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttt 33714593  T
Q  440 tggcccctc 448  Q
    ||| |||||    
T  33714594 tggtccctc 33714602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 2299617 - 2299564
Alignment:
Q  403 tagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    ||||||||||||||||||||||||||||||| ||||||   |||||||||||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttttatccctcctttcatc 2299564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 2299340 - 2299396
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||||||||| | ||||||||  ||||||||||||||||||||||||| ||||||||    
T  2299340 gggtaaatattttttttcgtctatgtaatattagcgaattccggttttagtccctgt 2299396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 9481494 - 9481446
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccct 447  Q
    |||||||||||||||| |||||||||||||||||| |||||||| ||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttggtccct 9481446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 452
Target Start/End: Original strand, 30618029 - 30618081
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctacttttggcccctccttt 452  Q
    |||||||||||||||||||||||||| ||| ||| |||||||| |||||||||    
T  30618029 atttagattttgtccctgtaatttcatattgttccacttttggtccctccttt 30618081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 455
Target Start/End: Original strand, 33637625 - 33637681
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcat 455  Q
    |||||||||||||| | |||||||| ||||||||| |||||||| ||||||||||||    
T  33637625 gatttagattttgttcttgtaattttagattcttccacttttggtccctcctttcat 33637681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 34884558 - 34884613
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||  |||||||    
T  34884558 ggtaaatatctcttttcgtccttgtaatattagtgaatttcggttttaatccctgt 34884613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 9854198 - 9854144
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctacttttggcccctcctttca 454  Q
    ||||||||||||||| |||||||||| ||||||| |||||||| ||||| |||||    
T  9854198 atttagattttgtccttgtaatttcatattcttccacttttggtccctcatttca 9854144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 373
Target Start/End: Original strand, 30617967 - 30618007
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattc 373  Q
    ||||||||| |||||||||||||||||||||||| ||||||    
T  30617967 gggtaaatacctcttttcgtccctgtaatattagtgaattc 30618007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 400 - 440
Target Start/End: Complemental strand, 30618272 - 30618232
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctactttt 440  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  30618272 atttagattttgtccctgtaattttagattcttccactttt 30618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 389
Target Start/End: Original strand, 21069527 - 21069570
Alignment:
Q  346 ttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| ||||||||||||| |||||||||||||||| ||||||||    
T  21069527 ttttagtccctgtaatatgagcgaattccggttttagtccctgt 21069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 341 - 380
Target Start/End: Complemental strand, 30459269 - 30459230
Alignment:
Q  341 atctcttttcgtccctgtaatattagcgaattccggtttt 380  Q
    |||||||||||| ||||||||||||||||||| |||||||    
T  30459269 atctcttttcgttcctgtaatattagcgaatttcggtttt 30459230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 367
Target Start/End: Original strand, 3229960 - 3229994
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagc 367  Q
    ||||||||||||||||| |||||||||||||||||    
T  3229960 gggtaaatatctctttttgtccctgtaatattagc 3229994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 456
Target Start/End: Complemental strand, 10322032 - 10321986
Alignment:
Q  410 tgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    |||||||||||||||||||||||  |||||||| || ||||||||||    
T  10322032 tgtccctgtaatttcagattctttcacttttggtccttcctttcatc 10321986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 442
Target Start/End: Original strand, 17142744 - 17142786
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctacttttgg 442  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttgg 17142786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Original strand, 30458967 - 30459008
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctactttt 440  Q
    |||||||||| |||| ||||||||||||||||||| ||||||    
T  30458967 gatttagattatgtcactgtaatttcagattcttcaactttt 30459008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 344 - 380
Target Start/End: Original strand, 30458911 - 30458947
Alignment:
Q  344 tcttttcgtccctgtaatattagcgaattccggtttt 380  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  30458911 tcttttcgtccctgtaatattagtgaatttcggtttt 30458947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 344 - 456
Target Start/End: Original strand, 26135828 - 26135940
Alignment:
Q  344 tcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctacttttggc 443  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||         ||||||||||||||||||||||||||||||||||||||||||||     
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggt 26135927  T
Q  444 ccctcctttcatc 456  Q
    |||||||||||||    
T  26135928 ccctcctttcatc 26135940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 26236127 - 26236250
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||         |||||| |||||||||||||||||||||||||||    
T  26236127 gggtaaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattctt 26236226  T
Q  433 ctacttttggcccctcctttcatc 456  Q
      |||||||| |||||||||||||    
T  26236227 tcacttttggtccctcctttcatc 26236250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 15106067 - 15106190
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||  |||||||         ||||||||||||||||||||||||| ||||| ||    
T  15106067 gggtaaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattatt 15106166  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  15106167 ccacttttggtccctcctttcatc 15106190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 17850964 - 17850841
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||         | ||||||||||||||||||||||||||||||||    
T  17850964 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattctt 17850865  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| ||||| |||||||    
T  17850864 ccacttttggtccctcttttcatc 17850841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 19251471 - 19251593
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||| ||||||||        | |||||||||||||||||||||||||| ||||||    
T  19251471 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaag-atttagattttgtccctgtaatttcatattctt 19251569  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  19251570 ccacttttggtccctcctttcatc 19251593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 23806330 - 23806215
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  23806330 gggtaaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23806231  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  23806230 ccacttttggtccctc 23806215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 333 - 442
Target Start/End: Original strand, 23854688 - 23854797
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| |||||||||||||||||||||||||||||| ||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  23854688 gggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 23854787  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  23854788 ccacttttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 17463469 - 17463361
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||| || ||||||    
T  17463469 gggtaaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattctt 17463370  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  17463369 ccacttttg 17463361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 42671097 - 42670974
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||| ||||||||| |||||||||||| | ||||| ||||||||        ||||||||||| |||||||||||||||| ||| ||    
T  42671097 gggtaaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattttt 42670998  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  42670997 ccacttttggtccctcctttcatc 42670974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 22263571 - 22263446
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng--gatttagattttgtccctgtaatttcagattc 430  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| ||| ||||           |||| |||||||||||||||||||||| ||||    
T  22263571 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattc 22263472  T
Q  431 ttctacttttggcccctcctttcatc 456  Q
    ||| |||||||| |||||||||||||    
T  22263471 ttccacttttggtccctcctttcatc 22263446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 26236472 - 26236358
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| |||| ||          ||||||||||||||||||||||||||||||||||    
T  26236472 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttg-gaaaaaaaagatttagattttgtccctgtaatttcagattctt 26236374  T
Q  433 ctacttttggcccctc 448  Q
    | | |||||| |||||    
T  26236373 ccatttttggtccctc 26236358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 26560556 - 26560668
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||||||||||||||||||||||||||| |||||| || |||| ||||||||         ||||||||||| ||||||||||||||||||||||    
T  26560556 gggttaatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaa--gatttagatttagtccctgtaatttcagattctt 26560653  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  26560654 ccacttttggtccct 26560668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 333 - 439
Target Start/End: Complemental strand, 44099000 - 44098894
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| || |||||          ||||||||| |||||||||||||||||||||||    
T  44099000 gggtaaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattctt 44098901  T
Q  433 ctacttt 439  Q
    | |||||    
T  44098900 ccacttt 44098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 15106443 - 15106337
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||| |||||||||||||||| || |||| ||||||||          |||||||||||||||||||||||||||||||||    
T  15106443 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcagattctt 15106346  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  15106345 ccacttttg 15106337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 17850587 - 17850694
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| |         ||||||||||||||| ||||||||| ||||||||    
T  17850587 gggtaaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctataaaaaaaa-gatttagattttgtctctgtaatttaagattctt 17850685  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  17850686 ccacttttg 17850694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 13254497 - 13254620
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||| ||| |||||||||||||||||||  ||||||  |||||||         |||||||||||||||| |||||||||||||||||    
T  13254497 gggtaaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattctt 13254596  T
Q  433 ctacttttggcccctcctttcatc 456  Q
      ||||||||  ||||||||||||    
T  13254597 tcacttttggttcctcctttcatc 13254620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 337 - 448
Target Start/End: Original strand, 30390463 - 30390574
Alignment:
Q  337 aaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctac 436  Q
    |||||||||||||||||| |||||||||||||||||||| ||||  |||||||          | |||||||||||||||||||||||| ||||||| ||    
T  30390463 aaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccac 30390562  T
Q  437 ttttggcccctc 448  Q
    |||||| |||||    
T  30390563 ttttggtccctc 30390574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 336 - 389
Target Start/End: Complemental strand, 13254811 - 13254758
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgt 13254758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 19251847 - 19251727
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||         |||||||||| ||||| |||||||||| ||||||    
T  19251847 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaa-gatttagattctgtccttgtaatttcatattctt 19251749  T
Q  433 ctacttttggcccctcctttca 454  Q
    | ||||| || ||||| |||||    
T  19251748 ccactttcggtccctcatttca 19251727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 381
Target Start/End: Complemental strand, 23855072 - 23855024
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttc 381  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23855072 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttc 23855024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 17463092 - 17463214
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  ||||||||||||| ||||||||||||||||||||||| ||| ||||          | ||||||||||||||||||||||||| ||||     
T  17463092 gggtaaatagttcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaa-aaattagattttgtccctgtaatttcaggttctc 17463190  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| ||||| |||||||    
T  17463191 ccacttttggtccctcatttcatc 17463214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 452
Target Start/End: Original strand, 20498747 - 20498864
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||  ||||||||||||||||| ||||||| ||||||||          ||||||||| ||||||||| |||||||||||||    
T  20498747 gggtaaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgtaaaaaaaa-tatttagattatgtccctgt-atttcagattctt 20498844  T
Q  433 ctacttttggcccctccttt 452  Q
    | |||||||| |||||||||    
T  20498845 ccacttttggtccctccttt 20498864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 39878103 - 39878225
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| || |||| |||| ||||||||||||||||||||||||| ||||||||          ||||||||| |||  ||||||||||||||||||    
T  39878103 gggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagattctt 39878201  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| | |||||||||||    
T  39878202 ccacttttggtcactcctttcatc 39878225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 439
Target Start/End: Original strand, 23046707 - 23046813
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| |||||||| |||||||||||||||| ||| || |          ||||||||| |||||||||||||||||||||||    
T  23046707 gggtaaatacctcttttcgtccttgtaatatgagcgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattctt 23046806  T
Q  433 ctacttt 439  Q
    | |||||    
T  23046807 ccacttt 23046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 42670717 - 42670773
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||| ||||||||    
T  42670717 gggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgt 42670773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 34548574 - 34548696
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  ||||||||||||||||||||||| |||||  |||||| ||||||||         |||||||||||||||| |||||||||| ||| ||    
T  34548574 gggtaaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgtaaaaaaaa-gatttagattttgtccatgtaatttcatattgtt 34548672  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | || ||||| | |||||||||||    
T  34548673 ccacctttggtcactcctttcatc 34548696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 20499123 - 20499014
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| || ||||| || ||| ||||||| | |||||||||||| ||| ||||         ||||||||||||||||||||||||||||||||||    
T  20499123 gggtaaatacctattttcatctctgaaatattaacaaattccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 20499024  T
Q  433 ctacttttgg 442  Q
      ||||||||    
T  20499023 tcacttttgg 20499014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 23806022 - 23806075
Alignment:
Q  403 tagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    ||||||||| ||||||||||| ||||||||| |||||||| |||||||||||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttcatc 23806075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 22263257 - 22263305
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccct 447  Q
    ||||||||||||||||||||||||||| ||||||| |||||||| ||||    
T  22263257 gatttagattttgtccctgtaatttcatattcttccacttttggtccct 22263305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 23047960 - 23047904
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||  |||||||    
T  23047960 gggtaaatacctattttcgtccctgtaatatgagcgaattccggttttgctccctgt 23047904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 23854977 - 23854921
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    |||||||||||||| ||||||||| | ||||||| |||||||| |||||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctcctttcatc 23854921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 386
Target Start/End: Complemental strand, 26560932 - 26560880
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccc 386  Q
    |||||||| |||||||||||| |||||||||||||||||||| |||| |||||    
T  26560932 ggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 39878450 - 39878395
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||| ||||||| |||| ||||||||||||||||||| ||||||||||||||    
T  39878450 gggtaaatacctctttttgtcc-tgtaatattagcgaattccagttttcgtccctgt 39878395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 387
Target Start/End: Complemental strand, 12419088 - 12419046
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccct 387  Q
    ||||| |||||||||||||||||||||||||||||| ||||||    
T  12419088 cttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 387
Target Start/End: Complemental strand, 12431148 - 12431106
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccct 387  Q
    ||||| |||||||||||||||||||||||||||||| ||||||    
T  12431148 cttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 13284779 - 13284735
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||    
T  13284779 cttttggtccctgtaatattagcgaatttcggttttagtccctgt 13284735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 385
Target Start/End: Complemental strand, 26136195 - 26136143
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    ||||||||| |||||||||||| |||||||||| |||||| ||||||| ||||    
T  26136195 gggtaaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 389
Target Start/End: Original strand, 30958696 - 30958740
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||    
T  30958696 cttttggtccctgtaatattagcgaatttcggttttagtccctgt 30958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 30960037 - 30959997
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  30960037 cttttggtccctgtaatattagcgaattccggttttagtcc 30959997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 44999354 - 44999398
Alignment:
Q  335 gtaaatatctcttttcgtccctgtaatattagcgaattccggttt 379  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||    
T  44999354 gtaaatatatcttttcgtccatgtaatattagcgaattctggttt 44999398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 389
Target Start/End: Original strand, 33290062 - 33290105
Alignment:
Q  346 ttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||    
T  33290062 ttttggtccctgtaatattagcgaattccagttttagtccctgt 33290105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 402 - 456
Target Start/End: Complemental strand, 26560863 - 26560809
Alignment:
Q  402 ttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    ||||||||||||| | |||||||| ||||||| |||||||| | |||||||||||    
T  26560863 ttagattttgtccatataatttcatattcttccacttttggtctctcctttcatc 26560809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 13284716 - 13284671
Alignment:
Q  403 tagattttgtccctgtaatttcagattcttctacttttggcccctc 448  Q
    |||||||||||| ||||||||||||||| || |||||||| |||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctc 13284671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 42670788 - 42670833
Alignment:
Q  402 ttagattttgtccctgtaatttcagattcttctacttttggcccct 447  Q
    ||||||||||||| |||||||||| ||||||| |||||||| ||||    
T  42670788 ttagattttgtccttgtaatttcatattcttccacttttggtccct 42670833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 44097738 - 44097795
Alignment:
Q  333 gggtaaatatctctttt-cgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||||||||||| |||| |||||||||||||  ||||||||||||||||  |||||||    
T  44097738 gggtaaatatctatttttcgtccctgtaataagagcgaattccggttttgatccctgt 44097795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 33290413 - 33290369
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||| ||||||||||||||||||||||| ||||||  |||||||    
T  33290413 cttttggtccctgtaatattagcgaattctggttttaatccctgt 33290369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 24837547 - 24837424
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  24837547 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 24837448  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    |||||||||  |||||||||||||    
T  24837447 ctacttttgctccctcctttcatc 24837424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 23979279 - 23979158
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  23979279 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 23979180  T
Q  433 ctacttttggcccctcctttca 454  Q
    | |||||||| ||||| |||||    
T  23979179 ccacttttggtccctcatttca 23979158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 14411697 - 14411820
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         |||||| ||||||||  |||||||||||||||||    
T  14411697 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagattctt 14411796  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  14411797 ccacttttggtccctcctttcatc 14411820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 7126295 - 7126172
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||| |||  |||         ||||||||||||||||||||||||||| ||||||    
T  7126295 gggtaaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 7126196  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  7126195 ccacttttggtccctcctttcatc 7126172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 14143902 - 14144024
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  14143902 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattctt 14144000  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | ||||||||  |||| |||||||    
T  14144001 ccacttttggtacctcatttcatc 14144024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 337 - 456
Target Start/End: Original strand, 29444810 - 29444929
Alignment:
Q  337 aaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctac 436  Q
    ||||||||||||||||||||||||||||| ||||||| | |||| ||||||||        ||||||||||| ||||| |||||||||| ||||||||||    
T  29444810 aaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattcttctac 29444909  T
Q  437 ttttggcccctcctttcatc 456  Q
    |||||| |||||||||||||    
T  29444910 ttttggtccctcctttcatc 29444929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 31799640 - 31799754
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||  ||||||||         ||||||||||||||||||||||||||||||||||    
T  31799640 gggtaaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 31799739  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  31799740 ccacttttggtccct 31799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 334 - 456
Target Start/End: Complemental strand, 41001729 - 41001608
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    |||||||| || ||||||||||||||||||||||||||||||||||| |||| |||        | ||||||||||||||||| ||||||||||||||||    
T  41001729 ggtaaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaag-atttagattttgtccctataatttcagattcttc 41001631  T
Q  434 tacttttggcccctcctttcatc 456  Q
     |||||||| |||||||||||||    
T  41001630 cacttttggtccctcctttcatc 41001608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 18336467 - 18336591
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||          |||||||||||||||||||||||||||||||||    
T  18336467 gggtaaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 18336566  T
Q  432 tctacttttggcccctcctttcatc 456  Q
    ||  ||||||  |||||||||||||    
T  18336567 tccgcttttgatccctcctttcatc 18336591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 18336833 - 18336726
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  18336833 gggtaaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 18336735  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  18336734 ccacttttg 18336726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 452
Target Start/End: Original strand, 17762283 - 17762401
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||         |||||| ||||||| |||||||||||||||||||    
T  17762283 gggtaaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttatattttgttcctgtaatttcagattctt 17762381  T
Q  433 ctacttttggcccctccttt 452  Q
    | |||||||| |||||||||    
T  17762382 ccacttttggtccctccttt 17762401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 24074303 - 24074426
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||          |||||||||||||| ||||||||||| ||||||    
T  24074303 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattctt 24074402  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  24074403 ccacttttggtccctcctttcatc 24074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 24837169 - 24837284
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||         |||||||||||||||| |||||||||| ||||||    
T  24837169 gggtaaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 24837268  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  24837269 ccacttttggtccctc 24837284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 17762660 - 17762545
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||         |||||||||||||||||  |||||||||||||||    
T  17762660 gggtaaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagattctt 17762561  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  17762560 ccacttttggtccctc 17762545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 334 - 456
Target Start/End: Complemental strand, 4919366 - 4919245
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||||| || |||||          ||| ||||||||||||||||||||||||||||||    
T  4919366 ggtaaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgtaaaaaaaaaaatt-agattttgtccctgtaatttcagattcttc 4919268  T
Q  434 tacttttggcccctcctttcatc 456  Q
    ||||||||  |||||||||||||    
T  4919267 tacttttgatccctcctttcatc 4919245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 29445183 - 29445070
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| || |||||         |||||||||||||||| |||||||||||||||||    
T  29445183 gggttaatatctcttttcgtccctgtaatattagcgaattccagttttagt-cctgtaaaaaaaaagatttagattttgtccttgtaatttcagattctt 29445085  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  29445084 ccacttttggtccct 29445070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 30512288 - 30512402
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||        |||||||||||| ||||||||||||||||||| ||    
T  30512288 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaggatttagatttggtccctgtaatttcagattttt 30512386  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  30512387 ccacttttggtccctc 30512402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 30552628 - 30552742
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||||||||||||| |||||  |||||| ||||||||        |||||||||||| ||||||||||||||||||| ||    
T  30552628 gggtaaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaggatttagatttggtccctgtaatttcagattttt 30552726  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  30552727 ccacttttggtccctc 30552742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 6817123 - 6817243
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| ||||||||||| ||||||||||||| ||||||||         |||||||||| ||||| |||||||||||||||||    
T  6817123 gggtaaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgtaaaaaaaa-gatttagattatgtccatgtaatttcagattctt 6817221  T
Q  433 ctacttttggcccctcctttca 454  Q
    | |||||||| ||||| |||||    
T  6817222 ccacttttggtccctcatttca 6817243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 24651077 - 24650954
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||| |||| |||          || |||||||| |||||||||||| ||||||||    
T  24651077 gggtaaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattctt 24650978  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||  |||||||||||||    
T  24650977 ccacttttgatccctcctttcatc 24650954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 337 - 456
Target Start/End: Complemental strand, 31800013 - 31799895
Alignment:
Q  337 aaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctac 436  Q
    ||||| |||||||||||||| ||||||||||||||||||||||| |||| |||         |||||||||||||||| ||||||||||||||||||  |    
T  31800013 aaatacctcttttcgtccctataatattagcgaattccggttttagtcc-tgtaaaaaaaaagatttagattttgtccatgtaatttcagattcttcctc 31799915  T
Q  437 ttttggcccctcctttcatc 456  Q
    |||||  |||||||||||||    
T  31799914 ttttgatccctcctttcatc 31799895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 14144279 - 14144165
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| ||||||||||| ||||||||||| ||||||||| |||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  14144279 gggttaatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattctt 14144180  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  14144179 ccacttttggtccct 14144165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 7125923 - 7126031
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctact 437  Q
    |||| |||||||||| |||||||||||||||||||||| |||| ||||||||        | ||||||||||||||||| |||||||||||||||| |||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgtaaaaaaaag-atttagattttgtccctataatttcagattcttccact 7126021  T
Q  438 tttggcccct 447  Q
    ||||| ||||    
T  7126022 tttggtccct 7126031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 994123 - 994005
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| || |||| ||||| |||||| ||||||||| ||||||| ||||||||         |||||||||||||||||||||||| |||||||||    
T  994123 gggtaaatacctttttt-gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattctt 994025  T
Q  433 ctacttttggcccctccttt 452  Q
    | |||||||| |||||||||    
T  994024 ccacttttggtccctccttt 994005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 4918989 - 4919105
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||| || |||||||||||||||||| ||||||| || |||||          ||||||||||||||||||||||||||| |||||    
T  4918989 gggtaaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 4919088  T
Q  432 tctacttttggcccctc 448  Q
    || |||||||| |||||    
T  4919089 tccacttttggtccctc 4919105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 400 - 456
Target Start/End: Complemental strand, 6817432 - 6817376
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    |||||||||||||||||||||||||| ||||||| |||||||| | |||||||||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtcactcctttcatc 6817376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 347 - 442
Target Start/End: Original strand, 41001370 - 41001462
Alignment:
Q  347 tttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctacttttgg 442  Q
    |||||||||||||||||||||||||| ||||||| ||||||||          | |||||||||||||||||||||||| ||||||| ||||||||    
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcatattcttccacttttgg 41001462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 993751 - 993806
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||  |||||||||| |||||||||||||||||||||||||| ||||||||    
T  993751 ggtaaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgt 993806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 20709589 - 20709467
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| |||||||||||| |||||||||| ||||||  |||||| ||||||||        | ||||||||||||||| |||||||||| ||||||    
T  20709589 gggttaatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgtaaaaaaaag-atttagattttgtccatgtaatttcatattctt 20709491  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||| | || ||||||||||    
T  20709490 ccactttttgtccttcctttcatc 20709467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 456
Target Start/End: Complemental strand, 27159327 - 27159212
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctact 437  Q
    |||| |||||||||||| ||||||||||||||||| ||||||| |||| |||          |||||||||||||||||||||||| | ||||||| | |    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa---atttagattttgtccctgtaattttatattcttccatt 27159231  T
Q  438 tttggcccctcctttcatc 456  Q
    ||||| |||| ||||||||    
T  27159230 tttggtcccttctttcatc 27159212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 27158991 - 27159104
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| |||||||||||| ||||||||||||||||| | ||||| ||| | ||        | ||||| |||||||||||||||||||||||||||    
T  27158991 gggttaatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaaaaaag-atttaaattttgtccctgtaatttcagattctt 27159089  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  27159090 ccacttttggtccct 27159104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 14412043 - 14411929
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||| || || |||||||| |||||| ||||||| ||||||||          ||||||||||||||| |||||||||||||||||    
T  14412043 gggtaaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaa-atttagattttgtccttgtaatttcagattctt 14411945  T
Q  433 ctacttttggcccctc 448  Q
    | || ||||| |||||    
T  14411944 ccacgtttggtccctc 14411929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 399 - 454
Target Start/End: Original strand, 20709278 - 20709333
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctcctttca 454  Q
    |||||||||| |||||||||||||||| ||||||| |||||||| ||||| |||||    
T  20709278 gatttagattctgtccctgtaatttcaaattcttccacttttggtccctcatttca 20709333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 442
Target Start/End: Original strand, 24650704 - 24650809
Alignment:
Q  335 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttct 434  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||  ||  |||         |||||||||||||| |||||||||||| |||||||     
T  24650704 gtaaatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgtaaaaaaa--gatttagattttgttcctgtaatttcatattcttcc 24650801  T
Q  435 acttttgg 442  Q
    ||||||||    
T  24650802 acttttgg 24650809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 24074682 - 24074566
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatatta--gcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattc 430  Q
    |||| ||| ||||||||| | | ||||||||||  |||||||||||||||  |||||||         |||||||||||||||| |||||||||| ||||    
T  24074682 gggttaatttctcttttcattcttgtaatattatagcgaattccggttttaatccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattc 24074583  T
Q  431 ttctacttttggcccct 447  Q
    ||| |||||||| ||||    
T  24074582 ttccacttttggtccct 24074566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 442
Target Start/End: Complemental strand, 20959402 - 20959360
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctacttttgg 442  Q
    |||||||||||||||||| |||||||||||| || ||||||||    
T  20959402 atttagattttgtccctgcaatttcagattcctccacttttgg 20959360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 14171964 - 14171841
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         |||||||||||||||||||||||||| |||||||    
T  14171964 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattctt 14171865  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| || ||||||||||    
T  14171864 ccacttttggtccttcctttcatc 14171841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 19113143 - 19113020
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||| |||||||| |||||||||||||| ||||||||         |||||||||||| |||||||||||||||||||||    
T  19113143 gggtaaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 19113044  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    |||||||||| |||||||||||||    
T  19113043 ctacttttggtccctcctttcatc 19113020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 33372406 - 33372529
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| || |||||         ||||||||||||||||||||||||||||||| ||    
T  33372406 gggtaaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagattatt 33372505  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  33372506 ccacttttggtccctcctttcatc 33372529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 9266975 - 9267090
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  9266975 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 9267074  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  9267075 ccacttttggtccctc 9267090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 14262414 - 14262291
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||| ||    
T  14262414 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgtt 14262315  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||| | |||||||||||||    
T  14262314 ccacttttagtccctcctttcatc 14262291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 20854073 - 20853951
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||| |||| |||         ||||||||||||||||||||||||||||||||||    
T  20854073 gggtaaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 20853975  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  20853974 ccacttttggtccctcctttcatc 20853951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 45969915 - 45970038
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  45969915 gggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 45970014  T
Q  433 ctacttttggcccctcctttcatc 456  Q
      |||||||| | |||||||||||    
T  45970015 tcacttttggtctctcctttcatc 45970038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 333 - 433
Target Start/End: Original strand, 19720333 - 19720433
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  19720333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 19720432  T
Q  433 c 433  Q
    |    
T  19720433 c 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 49986527 - 49986651
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||| ||| ||||          |||||||||||||||||||||||||||||||||    
T  49986527 gggtaaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 49986626  T
Q  432 tctacttttggcccctcctttcatc 456  Q
    ||||||||||| | |||||||||||    
T  49986627 tctacttttggtctctcctttcatc 49986651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 5800605 - 5800728
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||||| ||||||||        ||||||||||| |||||||||||||||| ||||||    
T  5800605 gggtaaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattctt 5800704  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | | |||||| |||||||||||||    
T  5800705 ccatttttggtccctcctttcatc 5800728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 14161871 - 14161994
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| || ||| |         |||||||||| |||||||||||||||| ||||||    
T  14161871 gggtaaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattctt 14161970  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  14161971 ccacttttggtccctcctttcatc 14161994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 16721991 - 16722114
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||          ||||||||||||||| |||||||||||||||||    
T  16721991 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattctt 16722090  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||| ||||||||    
T  16722091 ccacttttggtcccttctttcatc 16722114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 43572389 - 43572512
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  ||||||||| ||||||||||||||||||| ||||||| ||||||||          |||||||||||||||||||||||||||||||||    
T  43572389 gggtaaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattctt 43572488  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  43572489 ccacttttggtccctcctttcatc 43572512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 45003496 - 45003619
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||  |||||| |         ||||||||||||||||||||||||||||||||||    
T  45003496 gggtaaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattctt 45003595  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||| | |||||||||||||    
T  45003596 ccactttttgtccctcctttcatc 45003619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 14262036 - 14262150
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||          |||||||||||||||||||||||||||||||||    
T  14262036 gggttaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattctt 14262135  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  14262136 ccacttttggtccct 14262150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 9267352 - 9267230
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||| ||||||||           ||||||||||||||||||||| ||||||||||    
T  9267352 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtatataaattt-tttagattttgtccctgtaatatcagattctt 9267254  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    |||||||||| |||||||||||||    
T  9267253 ctacttttggtccctcctttcatc 9267230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 30500418 - 30500296
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||          |||||||||||||||||||||||||| ||| ||    
T  30500418 gggtaaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaa-aatttagattttgtccctgtaatttcatattgtt 30500320  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  30500319 ccacttttggtccctcctttcatc 30500296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 35995678 - 35995793
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||           ||||||||||||||||||||||||||||||||    
T  35995678 gggtaaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattctt 35995777  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  35995778 ccacttttggtccctc 35995793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 16722369 - 16722255
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  16722369 gggtaaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattctt 16722270  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  16722269 ccacttttggtccct 16722255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 11003732 - 11003855
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||| |||| |||||||||| |||||||||||||| ||||||||         || ||||||||||||| |||||||||||||||||    
T  11003732 gggtaaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattctt 11003831  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| || ||||||||||    
T  11003832 ccacttttggtccatcctttcatc 11003855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 14162248 - 14162135
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||| ||||||||         |||||||||||||||| |||||||||||||||||    
T  14162248 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaga-gatttagattttgtccttgtaatttcagattctt 14162150  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  14162149 ccacttttggtccct 14162135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 334 - 456
Target Start/End: Complemental strand, 52553065 - 52552943
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    ||||||||  ||||||||||| ||||||||||||||||||  ||||| ||||||||         ||||||||||||||| ||||||||||| |||||||    
T  52553065 ggtaaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttc 52552966  T
Q  434 tacttttggcccctcctttcatc 456  Q
     |||||||| |||||||||||||    
T  52552965 cacttttggtccctcctttcatc 52552943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 33372782 - 33372674
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||| |||||||||||||||| || |||| || |||||         ||||||||||||||||||||||||||||||||||    
T  33372782 gggtaaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattctt 33372683  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  33372682 ccacttttg 33372674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 19112764 - 19112879
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||          ||||||||||||||||||| ||||||| |||||    
T  19112764 gggtaaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattct 19112863  T
Q  432 tctacttttggcccct 447  Q
    || |||||||| ||||    
T  19112864 tccacttttggtccct 19112879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 21633274 - 21633159
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| || || |||||||||||||||||||||||| | ||||| |||||| |         ||||||||||||||||||||||||||||||||||    
T  21633274 gggtaaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattctt 21633175  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  21633174 ccacttttggtccctc 21633159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 5800982 - 5800869
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||         |||||||||||||||| |||||||||| ||||||    
T  5800982 gggttaatacctcttttcgtccctgtaatattagcgaattccgg-tttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattctt 5800884  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  5800883 ccacttttggtccct 5800869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 45970294 - 45970184
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||||||| ||||||||          |||||| ||||||||||||||||||||||||||    
T  45970294 gggtaaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattct 45970195  T
Q  432 tctacttttgg 442  Q
    || ||||||||    
T  45970194 tccacttttgg 45970184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 21632901 - 21633019
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||||||||     ||| ||||||||         ||| ||||| ||||||||||||||||||||||||    
T  21632901 gggtaaatacctcttttcgtccctgtaatattagcgaatt-----tttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcagattctt 21632995  T
Q  433 ctacttttggcccctcctttcatc 456  Q
      |||||||| |||||||||||||    
T  21632996 tcacttttggtccctcctttcatc 21633019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 30500043 - 30500155
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| |||||||| ||||||||||||||||||||| ||||||| ||||||||          |||||||||||||||||||||||||| ||||||    
T  30500043 gggttaatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcatattctt 30500140  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  30500141 ccacttttggtccct 30500155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 20853695 - 20853811
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt-nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||   ||||||          |||||||||||||||||| |||||||| |||||    
T  20853695 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattct 20853794  T
Q  432 tctacttttggcccctc 448  Q
    || |||||||| |||||    
T  20853795 tccacttttggtccctc 20853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 27946243 - 27946187
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||    
T  27946243 gggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 35996053 - 35995933
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  |||||||||||||||||||||||||||||||| |||| ||||||||          | ||||| |||||| | ||||||||||||||||    
T  35996053 gggtaaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaa---aattagaatttgtctcagtaatttcagattctt 35995957  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||| ||||||||    
T  35995956 ccacttttggtcccttctttcatc 35995933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 38283553 - 38283673
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttcta 435  Q
    ||||||||||||||| |||||||||||||| |||||||||||||| |||| |||          ||||||||||||| ||| |||||||| ||| ||| |    
T  38283553 taaatatctcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatattgttcca 38283652  T
Q  436 cttttggcccctcctttcatc 456  Q
    ||||||  |||||||||||||    
T  38283653 cttttgatccctcctttcatc 38283673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 45003873 - 45003759
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||| || |||||||||||||||||||||||||| ||||||| || |||||         ||||||||||| |||||| |||||||| ||||||    
T  45003873 gggtaaatatatcgtttcgtccctgtaatattagcgaatttcggttttagttcctgtaaaaaaaa-gatttagatttagtccctataatttcatattctt 45003775  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  45003774 ccacttttggtccctc 45003759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 4204709 - 4204829
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||| | |||||||||||||||||||||||  ||||| | ||||| || |||||        | ||||||||| |||||||||||||||||||||||    
T  4204709 gggtaaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaag-atttagattatgtccctgtaatttcagattctt 4204807  T
Q  433 ctacttttggcccctcctttca 454  Q
    | |||||||| ||||| |||||    
T  4204808 ccacttttggtccctcatttca 4204829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 43572768 - 43572648
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||| |||||||||||||  | |||||||||||| || |||||          ||||||||| |||||||||||||||||||||||    
T  43572768 gggtaaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaa-atttagattctgtccctgtaatttcagattctt 43572670  T
Q  433 ctacttttggcccctcctttca 454  Q
    | |||||||| ||||| |||||    
T  43572669 ccacttttggtccctcatttca 43572648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 14171587 - 14171694
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| | ||||||||||||||||||||||||||||||| ||||  |  ||||         ||||||||||||||||||||||||||| ||||||    
T  14171587 gggtaaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgtaaaaaaaa-gatttagattttgtccctgtaatttcaaattctt 14171685  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  14171686 ccacttttg 14171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 452
Target Start/End: Complemental strand, 17649384 - 17649269
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttcta 435  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||| || ||||         | |||||||||||||||||||||||||||||| ||| |    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctggaaaaaaaag-atttagattttgtccctgtaatttcagattattcca 17649286  T
Q  436 cttttggcccctccttt 452  Q
    | ||||| | |||||||    
T  17649285 catttggtctctccttt 17649269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 17465745 - 17465622
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| ||||||||||||||||| | |||||  || ||||          ||||| ||||||||||||||| || ||||||||    
T  17465745 gggtaaatacctcttttcgtccttgtaatattagcgaatttcagttttaatctctgtaaaataaaatatttaaattttgtccctgtaactttagattctt 17465646  T
Q  433 ctacttttggcccctcctttcatc 456  Q
      |||||||| |||||||||||||    
T  17465645 tcacttttggtccctcctttcatc 17465622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 388
Target Start/End: Complemental strand, 24490297 - 24490242
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctg 388  Q
    |||||||||||| ||||| ||||||||||||||| ||||||||||||| |||||||    
T  24490297 gggtaaatatcttttttcctccctgtaatattagtgaattccggttttagtccctg 24490242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||||||||||||||||||||||||||||| ||||||| ||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 399 - 441
Target Start/End: Original strand, 52552758 - 52552800
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttg 441  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  52552758 gatttagattttgtccctgtaatttcagattcttccacttttg 52552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 3424774 - 3424830
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||| ||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  3424774 gggttaatacctcttttggtccctgtaatattagcgatttccggttttggtccctgt 3424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 15328772 - 15328724
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccct 447  Q
    ||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  15328772 gatttagattttgtccctgtaatttcagatttttccacttttggtccct 15328724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 440
Target Start/End: Original strand, 35740829 - 35740922
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctactttt 440  Q
    ||||| |||||||||||||||||||||||||||||| ||||| ||        |  ||||||||||||||||||||||| | ||||||| ||||||    
T  35740829 cttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaaaag--tttagattttgtccctgtaattttaaattcttccactttt 35740922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 49986906 - 49986850
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||| ||||||||||||| |||||||||||||||| ||||||| || |||||    
T  49986906 gggtaaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgt 49986850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 440
Target Start/End: Complemental strand, 36991025 - 36990931
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctactttt 440  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||         | |||||||| |||||||||||||| ||||||||| ||||||    
T  36991025 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattcttccactttt 36990931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 440
Target Start/End: Complemental strand, 37016465 - 37016371
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctactttt 440  Q
    ||||| |||||||||||||||||||||| ||||||| ||||||||         | |||||||| |||||||||||||| ||||||||| ||||||    
T  37016465 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattcttccactttt 37016371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 456
Target Start/End: Complemental strand, 47575581 - 47575527
Alignment:
Q  402 ttagattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    |||||||||||| ||||||||||||||| ||| |||||||| | |||||||||||    
T  47575581 ttagattttgtctctgtaatttcagatttttcaacttttggtctctcctttcatc 47575527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 3426026 - 3425973
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccc 386  Q
    |||| |||| ||||||| | |||||||||||||||||||||||||||| |||||    
T  3426026 gggttaatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 441
Target Start/End: Complemental strand, 38283861 - 38283820
Alignment:
Q  400 atttagattttgtccctgtaatttcagattcttctacttttg 441  Q
    ||||||||||||||||| |||||||||||||||| |||||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttg 38283820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 35741950 - 35741906
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||    
T  35741950 cttttggtccctgtaatattagcgaattccagttttagtccctgt 35741906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 45058803 - 45058769
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttc 433  Q
    ||||||||||||||| |||||||||||||||||||    
T  45058803 gatttagattttgtctctgtaatttcagattcttc 45058769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 433
Target Start/End: Original strand, 15328463 - 15328560
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||| |||||||||||||  |||| || |||| ||||||||          | |||||||||||||||||||||||| ||||||    
T  15328463 gggtaaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcatattctt 15328559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 4907340 - 4907217
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  4907340 gggtaaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattctt 4907241  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  4907240 ccacttttggtccctcctttcatc 4907217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 18462286 - 18462408
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  18462286 gggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcagattctt 18462384  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | | |||||| |||||||||||||    
T  18462385 ccatttttggtccctcctttcatc 18462408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 24467629 - 24467751
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  |||||||||||||||||||||||||||||||  |||| ||||||||        | |||||||||||||||||||||||||||||||||    
T  24467629 gggtaaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaag-atttagattttgtccctgtaatttcagattctt 24467727  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  24467728 ccacttttggtccctcctttcatc 24467751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 52058386 - 52058263
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||||||||  |||||| || |||||         |||||||||| |||||||||||||||||||||||    
T  52058386 gggtaaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattctt 52058287  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  52058286 ccacttttggtccctcctttcatc 52058263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 39826424 - 39826315
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| ||||||||||||||||| ||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  39826424 gggtaaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattctt 39826325  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  39826324 ccacttttgg 39826315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 39711450 - 39711335
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||         ||||||||||||||||| ||||||||| ||||||    
T  39711450 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattctt 39711351  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  39711350 ccacttttggtccctc 39711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 17606684 - 17606572
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||         |||||||||||||||| |||||||||||||||||    
T  17606684 gggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaa--gatttagattttgtccttgtaatttcagattctt 17606587  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  17606586 ccacttttggtccct 17606572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 4906962 - 4907077
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||| ||||||  ||||| ||||||||         ||||||||||||||||||||||||||| ||||||    
T  4906962 gggtaaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattctt 4907061  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  4907062 ccacttttggtccctc 4907077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 8292804 - 8292927
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||         ||||||||||||||||||| ||||||| ||||||    
T  8292804 gggtaaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattctt 8292903  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | ||||||||  |||| |||||||    
T  8292904 ccacttttggttcctcttttcatc 8292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 33628690 - 33628805
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||| ||||| ||         ||||||||||||||||| ||||||||||||||||    
T  33628690 gggtaaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattctt 33628789  T
Q  433 ctacttttggcccctc 448  Q
      |||||||| |||||    
T  33628790 tcacttttggtccctc 33628805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 33629068 - 33628949
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| ||||||| |||||||||||||||||||||||||||||| ||||||||          | || ||||||||||||||||||||||||||||    
T  33629068 gggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattctt 33628969  T
Q  433 ctacttttggcccctccttt 452  Q
    | |||||||| |||||||||    
T  33628968 ccacttttggtccctccttt 33628949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 441
Target Start/End: Original strand, 39826050 - 39826158
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| | ||||||||||||||| || |||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  39826050 gggtaaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 39826149  T
Q  433 ctacttttg 441  Q
    | |||||||    
T  39826150 ccacttttg 39826158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 454
Target Start/End: Complemental strand, 24468002 - 24467884
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||   | ||||||||||| ||||||||||||| ||||||||         ||||||||||||||||||||||||||||||||||    
T  24468002 gggtaaatacctcttttc---catgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctt 24467906  T
Q  433 ctacttttggcccctcctttca 454  Q
    | |||||||| ||||| |||||    
T  24467905 ccacttttggtccctcatttca 24467884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 29696565 - 29696687
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| ||| ||||         ||||||||||||||||| ||||||||| ||||||    
T  29696565 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaa-gatttagattttgtccccgtaatttcatattctt 29696663  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||| | | |||||||||||    
T  29696664 ccactttttgtcactcctttcatc 29696687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 30299232 - 30299354
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||| | || |||| |||| |||         ||||||||||||||||||||||||||| ||||||    
T  30299232 gggtaaatacctcttttcgtccctgtaatattagcgaacttcgattttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcatattctt 30299330  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| | |||||||||||    
T  30299331 ccacttttggtctctcctttcatc 30299354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 452
Target Start/End: Original strand, 39711074 - 39711191
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||        | ||||||||||||||| |||||||||| ||||||    
T  39711074 gggtaaatacctcttttcgtct-tgtaatattagcgaattccggttttagtccctgtaaaaaaaag-atttagattttgtccttgtaatttcatattctt 39711171  T
Q  433 ctacttttggcccctccttt 452  Q
    | |||||||| |||||||||    
T  39711172 ccacttttggtccctccttt 39711191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 48071961 - 48072084
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| ||||||||||||||| | |||||||||||||||||| |||||| || |||||         ||||||||||||||||||||||||||| ||| ||    
T  48071961 gggttaatatctcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttcatattatt 48072060  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||  |||||||||||||    
T  48072061 ccacttttgctccctcctttcatc 48072084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 333 - 454
Target Start/End: Original strand, 52058011 - 52058132
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||| |||||||||| |||||||||||||| ||  ||||         |||||||| | |||||||||||||||||||||||    
T  52058011 gggtaaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattctt 52058110  T
Q  433 ctacttttggcccctcctttca 454  Q
    | |||||||| ||||| |||||    
T  52058111 ccacttttggtccctcatttca 52058132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 39971024 - 39970900
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||||||| |||||||||| |||||| ||||||| ||||||||          ||||||||||||||||||||||||| |||| ||    
T  39971024 gggtaaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatcct 39970925  T
Q  432 tctacttttggcccctcctttcatc 456  Q
    || |||||||| |||| ||||||||    
T  39970924 tccacttttggtcccttctttcatc 39970900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 336 - 456
Target Start/End: Original strand, 17606307 - 17606431
Alignment:
Q  336 taaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt----nnnnnnnnggatttagattttgtccctgtaatttcagattct 431  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| ||||||||             |||||||||||||| |||||||||||| |||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  432 tctacttttggcccctcctttcatc 456  Q
    || |||||||| ||||| |||||||    
T  17606407 tccacttttggtccctcatttcatc 17606431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 30299609 - 30299494
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| || |||||||| ||||||||||||| |||| ||||||| || |||||         ||||||||||||||||||||||||| ||||||||    
T  30299609 gggtaaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattctt 30299510  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  30299509 ccacttttggtccctc 30299494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 34749483 - 34749364
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||| ||| ||||||||||| ||||||||| |||| |||| |||         |||||||||||| |||||||||||||||||||||    
T  34749483 gggtaaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattctt 34749384  T
Q  433 ctacttttggcccctccttt 452  Q
    | ||||||||  ||||||||    
T  34749383 ccacttttggtacctccttt 34749364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 337 - 442
Target Start/End: Complemental strand, 18462658 - 18462553
Alignment:
Q  337 aaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctac 436  Q
    ||||| |||||||| |||||||||||||||| |||||||||||| || | |||         ||||||||||||||||| ||||||||||||||||| ||    
T  18462658 aaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattcttccac 18462559  T
Q  437 ttttgg 442  Q
    ||||||    
T  18462558 ttttgg 18462553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 335 - 456
Target Start/End: Original strand, 43539349 - 43539470
Alignment:
Q  335 gtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttct 434  Q
    |||||||||||||||| ||| ||||| |||||| ||||||| |||| |||| |||         ||||||||||||||||||||||||| | ||| |||     
T  43539349 gtaaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattgttcc 43539448  T
Q  435 acttttggcccctcctttcatc 456  Q
    |||||||| |||||||||||||    
T  43539449 acttttggtccctcctttcatc 43539470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 8293186 - 8293070
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||||||||| |||||||| |||||||  ||||| ||||||||          ||||||||||||||||||||||||||| |||||    
T  8293186 gggtaaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattct 8293087  T
Q  432 tctacttttggcccctc 448  Q
    || |||||||| |||||    
T  8293086 tccacttttggtccctc 8293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 333 - 442
Target Start/End: Complemental strand, 48072339 - 48072230
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||  ||||||||||| ||||||||||||| |||| |||          ||||||||| |||||||||||||||| ||||||    
T  48072339 gggtaaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattctt 48072240  T
Q  433 ctacttttgg 442  Q
    | ||||||||    
T  48072239 ccacttttgg 48072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 18342395 - 18342339
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||||| ||||||||    
T  18342395 gggtaaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgt 18342339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 20995698 - 20995754
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    ||||||||| |||||||| || |||||||||||||||||||||||||| ||||||||    
T  20995698 gggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 29696935 - 29696821
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||   ||||||||||||||||||||||||| ||| ||||          ||| ||||||||||| |||||||||||||||||    
T  29696935 gggtaaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatt-agattttgtccatgtaatttcagattctt 29696837  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  29696836 ccacttttggtccctc 29696821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 448
Target Start/End: Original strand, 34749138 - 34749252
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||  ||||||| |||||||||||||||||||||| | |||| |||||| |        | |||||||||||||||| ||||||||| ||||||    
T  34749138 gggtaaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaaaag-atttagattttgtccccgtaatttcatattctt 34749236  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  34749237 ccacttttggtccctc 34749252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 454
Target Start/End: Original strand, 42510034 - 42510135
Alignment:
Q  352 tccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctacttttggcccctcctt 451  Q
    |||||||||||||||||||||||||||||  |||||||          |||||||||||||||||||||||||| ||||||| |||||| | ||||| ||    
T  42510034 tccctgtaatattagcgaattccggttttaatccctgtaaaaaaata-atttagattttgtccctgtaatttcatattcttccacttttagtccctcatt 42510132  T
Q  452 tca 454  Q
    |||    
T  42510133 tca 42510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 387
Target Start/End: Original strand, 37236723 - 37236772
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccct 387  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  37236723 aatatctcttttggtccctgtaatatgagcgaattccggttttagtccct 37236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 27039638 - 27039690
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  27039638 gggttaatacctcttttcgtccctgtaatatgagcgaattccggttttggtcc 27039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 43539725 - 43539669
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||| || |||||    
T  43539725 gggttaatagctcttttcgtccctgtaatattagcaaattccggttttagttcctgt 43539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 333 - 440
Target Start/End: Complemental strand, 17502107 - 17502001
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||||| ||||| |||| ||||||||||||||||||||||||| |||||| |         | |||||||| ||||||||||||||||||||| |    
T  17502107 gggttaatatcacttttggtccttgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccctgtaatttcagattcct 17502009  T
Q  433 ctactttt 440  Q
    | ||||||    
T  17502008 ccactttt 17502001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 447
Target Start/End: Complemental strand, 20996045 - 20995932
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||| |||| ||||||| ||||||||||||||||||||||   ||||| |||| |||        | |||||||||||||| ||||||||||| ||||||    
T  20996045 gggttaatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaag-atttagattttgtctctgtaatttcatattctt 20995947  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  20995946 ccacttttggtccct 20995932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 39970712 - 39970761
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctc 448  Q
    |||||||||||||||  |||||||||||||||||| |||||||| |||||    
T  39970712 gatttagattttgtctatgtaatttcagattcttccacttttggtccctc 39970761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 345 - 385
Target Start/End: Complemental strand, 42510381 - 42510341
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    ||||| |||||||||||||||||||||||||||||| ||||    
T  42510381 cttttggtccctgtaatattagcgaattccggttttagtcc 42510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 389
Target Start/End: Original strand, 43400753 - 43400809
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||| ||||||||||| || |||||| |||||||||||||||| ||||||||    
T  43400753 gggttaatacctcttttcgtctctataatatgagcgaattccggttttggtccctgt 43400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Complemental strand, 13230110 - 13230063
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggtttt 380  Q
    ||||||||| ||||||||||| ||| |||||||||||||| |||||||    
T  13230110 gggtaaatacctcttttcgtctctgaaatattagcgaatttcggtttt 13230063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 389
Target Start/End: Original strand, 17500782 - 17500825
Alignment:
Q  346 ttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||    
T  17500782 ttttggtccctgtaatattagcgaattccggttttagtctctgt 17500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 389
Target Start/End: Original strand, 26266420 - 26266471
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||||||||||| |||||||||||||||||||| | ||||||| ||| ||||    
T  26266420 aatatctcttttagtccctgtaatattagcgaaattcggtttttgtctctgt 26266471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 33628886 - 33628849
Alignment:
Q  411 gtccctgtaatttcagattcttctacttttggcccctc 448  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  33628886 gtccctgtaatttcagattcctctacttttggtccctc 33628849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 400 - 432
Target Start/End: Complemental strand, 215223 - 215191
Alignment:
Q  400 atttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||||||||| |||||||||||||||||    
T  215223 atttagattttgtccttgtaatttcagattctt 215191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 26271263 - 26271207
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||| |||| ||||||| ||||| |||||||||||||| | ||||||| ||||||||    
T  26271263 gggttaatacctcttttagtcccagtaatattagcgaaattcggttttggtccctgt 26271207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 338 - 456
Target Start/End: Complemental strand, 12355 - 12237
Alignment:
Q  338 aatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctact 437  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||| |         ||||||||||||||||||||||||||||||||||| |||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  438 tttggcccctcctttcatc 456  Q
    ||||| || ||||||||||    
T  12255 tttggtccatcctttcatc 12237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 333 - 456
Target Start/End: Complemental strand, 7578 - 7454
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||          |||||||||||||||||||||||||||||||||    
T  7578 gggtaaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattct 7479  T
Q  432 tctacttttggcccctcctttcatc 456  Q
    ||||||||||| |  ||||||||||    
T  7478 tctacttttggtctatcctttcatc 7454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 334 - 448
Target Start/End: Original strand, 7227 - 7341
Alignment:
Q  334 ggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttc 433  Q
    |||||||| |||||||||||| |||||||||||||||||| ||| || || |||||         ||||||||||||||||||||||||||| |||||||    
T  7227 ggtaaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 7326  T
Q  434 tacttttggcccctc 448  Q
     ||||| || |||||    
T  7327 cactttcggtccctc 7341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 333 - 442
Target Start/End: Original strand, 3869 - 3978
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||         |||||||||| |||||||||||||||| ||||||    
T  3869 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattctt 3968  T
Q  433 ctacttttgg 442  Q
    | ||| ||||    
T  3969 ccactgttgg 3978  T

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Target: scaffold0361 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 452
Target Start/End: Original strand, 4562 - 4682
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnng-gatttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||| ||||||||          |||||| |||||||||||||||||| |||||||    
T  4562 gggtaaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattct 4661  T
Q  432 tctacttttggcccctccttt 452  Q
    ||||||||||| |||||||||    
T  4662 tctacttttggtccctccttt 4682  T

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Target: scaffold0361; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 4940 - 4826
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||  |||||||         |||||||||||||||| |||||||||| ||||||    
T  4940 gggtaaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgtaaaaataa-gatttagattttgtccttgtaatttcatattctt 4842  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  4841 ccacttttggtccctc 4826  T

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Target: scaffold0809 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 1411 - 1533
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||||| ||| |||||||| ||||||| || |||| ||||||||        | ||||||||| |||||||||||||||||||||||    
T  1411 gggtaaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaag-atttagattatgtccctgtaatttcagattctt 1509  T
Q  433 ctacttttggcccctcctttcatc 456  Q
    | |||||||| |||||||||||||    
T  1510 ccacttttggtccctcctttcatc 1533  T

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Target: scaffold0809; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 333 - 448
Target Start/End: Complemental strand, 1784 - 1673
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||  ||||||||||||||||||||||| |||||||||||||| |||||| |          | ||||||| ||||| |||||||||||||||||    
T  1784 gggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctataaaaaa----aattagattatgtccttgtaatttcagattctt 1689  T
Q  433 ctacttttggcccctc 448  Q
    | |||||||| |||||    
T  1688 ccacttttggtccctc 1673  T

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Target: scaffold0141 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 333 - 456
Target Start/End: Original strand, 8325 - 8446
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||| ||         ||||||||||||||||| ||||  ||||||||||    
T  8325 gggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccccgtaaataaaaagatttagattttgtcccagtaa--tcagattctt 8422  T
Q  433 ctacttttggcccctcctttcatc 456  Q
      |||||||| | |||||||||||    
T  8423 tcacttttggtctctcctttcatc 8446  T

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Target: scaffold0141; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 8688 - 8585
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctacttttggcc 444  Q
    ||||| || |||| |||||||||||||||||||||| |||||| |         ||||||||||||||||||||||||| ||||||||| |||||||| |    
T  8688 ctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattcttccacttttggtc 8589  T
Q  445 cctc 448  Q
    ||||    
T  8588 cctc 8585  T

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Target: scaffold0176 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 333 - 389
Target Start/End: Complemental strand, 16006 - 15950
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgt 389  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||    
T  16006 gggtaaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgt 15950  T

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Target: scaffold0176; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 15939 - 15887
Alignment:
Q  404 agattttgtccctgtaatttcagattcttctacttttggcccctcctttcatc 456  Q
    |||||||||||||||||||||| ||||||  |||||||| | |||||||||||    
T  15939 agattttgtccctgtaatttcatattctttcacttttggtctctcctttcatc 15887  T

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Target: scaffold0352 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 333 - 447
Target Start/End: Original strand, 4667 - 4781
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattctt 432  Q
    ||||||||| ||||||| ||||||| |||||||||||||||| ||||| |||||| |           |||||||| ||||||||||||||||||||| |    
T  4667 gggtaaatacctcttttagtccctgcaatattagcgaattccagttttagtccctataaaaaaaaaagtttagattctgtccctgtaatttcagattcct 4766  T
Q  433 ctacttttggcccct 447  Q
    | |||||||| ||||    
T  4767 ccacttttggtccct 4781  T

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Target: scaffold0352; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 333 - 441
Target Start/End: Complemental strand, 6057 - 5948
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnngga-tttagattttgtccctgtaatttcagattct 431  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||| |||| ||||||||          | |||||||| |||||||||||||||||||||     
T  6057 gggtaaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatttcagattcc 5958  T
Q  432 tctacttttg 441  Q
    || |||||||    
T  5957 tccacttttg 5948  T

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Target: scaffold0477 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 448
Target Start/End: Complemental strand, 5113 - 5011
Alignment:
Q  345 cttttcgtccctgtaatattagcgaattccggttttcgtccctgtnnnnnnnnggatttagattttgtccctgtaatttcagattcttctacttttggcc 444  Q
    |||||||||| ||||||||||||||||||||||||| ||||  ||          |||||||||| ||||||||||||| ||||||||| |||||||| |    
T  5113 cttttcgtccatgtaatattagcgaattccggtttttgtcctagtaaaaaaaat-atttagatttagtccctgtaattttagattcttccacttttggtc 5015  T
Q  445 cctc 448  Q
    ||||    
T  5014 cctc 5011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 333 - 385
Target Start/End: Original strand, 4880 - 4932
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggttttcgtcc 385  Q
    ||||||||| ||||||| || ||||||||||||||||||| ||||||| ||||    
T  4880 gggtaaatacctctttttgttcctgtaatattagcgaatttcggttttagtcc 4932  T

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Target: scaffold0881 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 380
Target Start/End: Original strand, 219 - 266
Alignment:
Q  333 gggtaaatatctcttttcgtccctgtaatattagcgaattccggtttt 380  Q
    ||||| ||||||||||| |||||||||| |||||||||||| ||||||    
T  219 gggtagatatctctttttgtccctgtaaaattagcgaattctggtttt 266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 286 - 335
Alignment:
Q  399 gatttagattttgtccctgtaatttcagattcttctacttttggcccctc 448  Q
    |||||||||||| ||||  |||||||||||||||| |||||||| |||||    
T  286 gatttagattttctccccataatttcagattcttccacttttggtccctc 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 416 - 379
Alignment:
Q  411 gtccctgtaatttcagattcttctacttttggcccctc 448  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  416 gtccctgtaatttcagattcctctacttttggtccctc 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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