View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11389_low_15 (Length: 408)

Name: NF11389_low_15
Description: NF11389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11389_low_15
NF11389_low_15
[»] chr5 (25 HSPs)
chr5 (11-363)||(25562449-25562800)
chr5 (12-155)||(26406632-26406775)
chr5 (12-155)||(25837987-25838130)
chr5 (12-149)||(17841408-17841546)
chr5 (12-133)||(31782616-31782738)
chr5 (12-155)||(2298160-2298305)
chr5 (12-155)||(22672713-22672857)
chr5 (12-155)||(35385611-35385755)
chr5 (12-155)||(40222642-40222786)
chr5 (12-145)||(25452384-25452518)
chr5 (12-137)||(16093450-16093575)
chr5 (12-155)||(1240307-1240451)
chr5 (12-137)||(10627260-10627387)
chr5 (12-145)||(25445381-25445519)
chr5 (12-137)||(11962592-11962717)
chr5 (12-145)||(1170702-1170834)
chr5 (40-149)||(42238188-42238298)
chr5 (12-149)||(28786291-28786427)
chr5 (12-72)||(15445430-15445493)
chr5 (16-68)||(4897792-4897844)
chr5 (57-133)||(35314703-35314779)
chr5 (55-126)||(4754166-4754237)
chr5 (12-47)||(13295823-13295858)
chr5 (12-107)||(13294711-13294812)
chr5 (62-135)||(29748349-29748423)
[»] chr7 (30 HSPs)
chr7 (12-155)||(25351233-25351376)
chr7 (12-155)||(25356927-25357070)
chr7 (12-155)||(25410010-25410153)
chr7 (12-137)||(21369539-21369665)
chr7 (12-137)||(44016820-44016946)
chr7 (12-145)||(8378663-8378797)
chr7 (12-155)||(34547022-34547166)
chr7 (12-144)||(44144025-44144157)
chr7 (12-137)||(44010909-44011035)
chr7 (12-155)||(6067359-6067503)
chr7 (12-149)||(7464677-7464815)
chr7 (12-133)||(42006565-42006686)
chr7 (12-145)||(7069671-7069803)
chr7 (12-145)||(7074678-7074810)
chr7 (12-145)||(15541154-15541286)
chr7 (12-145)||(25405284-25405416)
chr7 (12-133)||(2120800-2120922)
chr7 (12-149)||(44512684-44512822)
chr7 (12-116)||(1099593-1099697)
chr7 (12-133)||(30246872-30246993)
chr7 (12-145)||(3320209-3320341)
chr7 (12-145)||(3324957-3325089)
chr7 (55-134)||(11081520-11081600)
chr7 (12-132)||(45366544-45366656)
chr7 (12-135)||(6048882-6049000)
chr7 (55-107)||(11084417-11084469)
chr7 (36-73)||(1099717-1099754)
chr7 (55-105)||(6332263-6332313)
chr7 (12-77)||(12310175-12310234)
chr7 (65-109)||(13290681-13290725)
[»] chr4 (35 HSPs)
chr4 (12-155)||(16638706-16638850)
chr4 (12-155)||(16489229-16489372)
chr4 (12-155)||(25699629-25699772)
chr4 (12-137)||(47566390-47566516)
chr4 (15-133)||(15312218-15312336)
chr4 (12-137)||(36771293-36771419)
chr4 (12-155)||(15831020-15831164)
chr4 (12-155)||(18586845-18586989)
chr4 (12-155)||(31300303-31300447)
chr4 (12-155)||(4569974-4570117)
chr4 (12-137)||(13072140-13072265)
chr4 (16-133)||(36769380-36769498)
chr4 (12-155)||(4556218-4556362)
chr4 (12-126)||(8529176-8529290)
chr4 (12-137)||(4558208-4558334)
chr4 (12-133)||(15316860-15316981)
chr4 (12-124)||(25614079-25614191)
chr4 (12-145)||(11853440-11853572)
chr4 (12-155)||(4884753-4884897)
chr4 (12-155)||(16689099-16689243)
chr4 (21-109)||(26557664-26557752)
chr4 (12-133)||(55822169-55822288)
chr4 (12-107)||(7050416-7050511)
chr4 (38-133)||(32274087-32274181)
chr4 (12-133)||(4874638-4874759)
chr4 (16-126)||(3982342-3982450)
chr4 (12-126)||(16185995-16186108)
chr4 (12-104)||(5336941-5337035)
chr4 (55-134)||(10112925-10113005)
chr4 (55-135)||(38208880-38208961)
chr4 (55-135)||(9022359-9022440)
chr4 (55-133)||(23001582-23001660)
chr4 (55-133)||(5516453-5516531)
chr4 (55-135)||(52043579-52043660)
chr4 (55-134)||(47151090-47151169)
[»] chr8 (26 HSPs)
chr8 (12-137)||(30423109-30423235)
chr8 (12-155)||(2267182-2267326)
chr8 (12-133)||(28895404-28895525)
chr8 (12-137)||(33032552-33032677)
chr8 (12-155)||(9021266-9021410)
chr8 (12-155)||(21033749-21033893)
chr8 (12-133)||(590696-590817)
chr8 (12-133)||(23179720-23179841)
chr8 (12-155)||(29554944-29555088)
chr8 (12-137)||(17799583-17799708)
chr8 (18-133)||(26268395-26268510)
chr8 (12-145)||(28327799-28327931)
chr8 (12-133)||(16752681-16752800)
chr8 (12-133)||(17847581-17847701)
chr8 (12-133)||(16757426-16757545)
chr8 (14-145)||(4812648-4812778)
chr8 (12-145)||(28332522-28332654)
chr8 (12-145)||(25684534-25684666)
chr8 (12-133)||(15949436-15949557)
chr8 (12-149)||(3276229-3276367)
chr8 (39-133)||(15944775-15944869)
chr8 (12-133)||(28228416-28228537)
chr8 (12-134)||(6376042-6376164)
chr8 (35-125)||(33021079-33021170)
chr8 (55-128)||(31573922-31573995)
chr8 (12-52)||(13985239-13985278)
[»] chr1 (14 HSPs)
chr1 (12-155)||(3091265-3091409)
chr1 (12-137)||(4144842-4144967)
chr1 (12-146)||(14996929-14997063)
chr1 (12-155)||(9526345-9526489)
chr1 (12-155)||(25133951-25134094)
chr1 (12-155)||(21353505-21353649)
chr1 (12-155)||(2393441-2393584)
chr1 (12-145)||(9521604-9521738)
chr1 (12-145)||(2232488-2232620)
chr1 (12-126)||(46783052-46783166)
chr1 (12-100)||(2401380-2401468)
chr1 (55-129)||(14352964-14353038)
chr1 (58-106)||(13785483-13785531)
chr1 (31-134)||(20566847-20566947)
[»] chr6 (25 HSPs)
chr6 (12-137)||(19702021-19702147)
chr6 (12-155)||(17695010-17695154)
chr6 (12-155)||(3577673-3577817)
chr6 (12-155)||(25466058-25466202)
chr6 (12-155)||(22342960-22343104)
chr6 (12-155)||(22352011-22352155)
chr6 (12-155)||(13467622-13467766)
chr6 (12-136)||(26643075-26643199)
chr6 (12-136)||(26749041-26749165)
chr6 (13-133)||(24542834-24542953)
chr6 (12-116)||(17035974-17036078)
chr6 (12-145)||(13878618-13878750)
chr6 (12-145)||(13883366-13883498)
chr6 (12-145)||(16785810-16785942)
chr6 (12-145)||(31248873-31249005)
chr6 (12-145)||(35201485-35201617)
chr6 (12-133)||(26887383-26887502)
chr6 (12-149)||(33215712-33215850)
chr6 (12-155)||(25941524-25941667)
chr6 (12-103)||(12166305-12166397)
chr6 (12-137)||(5165974-5166099)
chr6 (55-135)||(22858150-22858231)
chr6 (12-109)||(7293862-7293958)
chr6 (55-135)||(30445552-30445633)
chr6 (12-124)||(20526855-20526960)
[»] scaffold0004 (1 HSPs)
scaffold0004 (12-155)||(188401-188545)
[»] chr3 (36 HSPs)
chr3 (14-155)||(5858425-5858567)
chr3 (12-155)||(47878330-47878474)
chr3 (12-155)||(47883041-47883184)
chr3 (12-155)||(22626143-22626287)
chr3 (12-155)||(13893341-13893485)
chr3 (12-155)||(27762145-27762287)
chr3 (12-155)||(54193104-54193249)
chr3 (16-155)||(10612941-10613081)
chr3 (12-155)||(10896884-10897028)
chr3 (12-145)||(16462092-16462226)
chr3 (12-145)||(29914112-29914246)
chr3 (12-137)||(38002767-38002892)
chr3 (20-135)||(3329792-3329908)
chr3 (12-155)||(10949419-10949561)
chr3 (12-155)||(11079397-11079540)
chr3 (12-142)||(10595193-10595323)
chr3 (12-155)||(4535493-4535637)
chr3 (12-145)||(6303201-6303333)
chr3 (12-145)||(10094233-10094365)
chr3 (12-145)||(10100250-10100382)
chr3 (12-145)||(10201113-10201245)
chr3 (12-133)||(27544177-27544296)
chr3 (12-130)||(16996780-16996898)
chr3 (12-145)||(10208159-10208291)
chr3 (12-133)||(54188410-54188532)
chr3 (31-133)||(15823788-15823889)
chr3 (12-133)||(26762941-26763061)
chr3 (12-109)||(20031477-20031574)
chr3 (21-133)||(27703338-27703450)
chr3 (22-126)||(46966817-46966921)
chr3 (14-137)||(7417967-7418085)
chr3 (79-155)||(48390445-48390523)
chr3 (35-73)||(42297838-42297876)
chr3 (12-134)||(7768552-7768670)
chr3 (82-134)||(1618882-1618934)
chr3 (55-128)||(13419870-13419943)
[»] chr2 (32 HSPs)
chr2 (12-155)||(22712675-22712819)
chr2 (12-155)||(12781380-12781523)
chr2 (12-155)||(38190877-38191020)
chr2 (12-155)||(30478873-30479017)
chr2 (12-145)||(17932523-17932657)
chr2 (12-133)||(27517798-27517919)
chr2 (12-155)||(20050181-20050325)
chr2 (12-155)||(17943417-17943560)
chr2 (12-145)||(22717384-22717518)
chr2 (12-145)||(33674564-33674698)
chr2 (12-155)||(20054924-20055068)
chr2 (12-155)||(37170911-37171055)
chr2 (34-155)||(35894442-35894564)
chr2 (12-145)||(17462327-17462459)
chr2 (12-145)||(39686874-39687006)
chr2 (12-145)||(45567300-45567432)
chr2 (14-133)||(33603897-33604015)
chr2 (12-145)||(2736096-2736228)
chr2 (12-145)||(2740832-2740964)
chr2 (12-145)||(39679936-39680068)
chr2 (31-133)||(30261951-30262052)
chr2 (12-86)||(45158257-45158331)
chr2 (12-71)||(20589727-20589786)
chr2 (12-59)||(28458988-28459035)
chr2 (55-133)||(26345575-26345653)
chr2 (55-134)||(43139354-43139434)
chr2 (55-107)||(30720820-30720872)
chr2 (55-137)||(27248111-27248193)
chr2 (55-133)||(35028556-35028634)
chr2 (65-137)||(39287183-39287256)
chr2 (61-133)||(10942726-10942798)
chr2 (61-133)||(10948595-10948667)
[»] scaffold0256 (1 HSPs)
scaffold0256 (12-145)||(16214-16348)
[»] scaffold0209 (1 HSPs)
scaffold0209 (12-133)||(17145-17266)
[»] scaffold0131 (1 HSPs)
scaffold0131 (12-145)||(31032-31164)
[»] scaffold0006 (1 HSPs)
scaffold0006 (12-145)||(224710-224842)
[»] scaffold1764 (1 HSPs)
scaffold1764 (81-145)||(1325-1391)


Alignment Details
Target: chr5 (Bit Score: 273; Significance: 1e-152; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 11 - 363
Target Start/End: Original strand, 25562449 - 25562800
Alignment:
Q  11 cagagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgta 110  Q
    |||| ||| |||||||| ||||||||||||||||||||||||||||||||||| |||| | ||||||||||| ||||||||||||||| |||| ||||||    
T  25562449 cagaaactaaatcctaagagtgttttgttcaaggtgaatcaaaacaatctcaatcctaatatttgttcccaaaagaaatttctataaatcctaatttgta 25562548  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgataacatggtgaatacctaactgtgatgtgtcaacgggtgaattatcaaattgtgaca 210  Q
    ||||||||||||| |||| |||||||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  25562549 tgttggtttctaa-ccttattttctacacacgttttcatctgataacatggtgaatgcctaactgtgatgtgtcaacgggtgaataatcaaattgtgaca 25562647  T
Q  211 caagcaagacattgatatgattagaaacaagttcagaaggtgatacgaaacaagttagcttgttgaagcacggatacagggtgctcatacttttcttgaa 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  25562648 caagcaagacattgatatgattagaaacaagttcagaaggtgatatgaaacaagttagcttgttgaagcacagatacagggtgctcatatttttcttgaa 25562747  T
Q  311 tgaaaccagaactagtcctagaagtagttgttaccacctcactgttaccaata 363  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25562748 tgaaaccagaactagtcctagaagtagttgttaccacctcactgttaccaata 25562800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 26406632 - 26406775
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |    
T  26406632 agagactcaatcctaacaatgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttgccaagagaattctctataaaccctagtttgttt 26406731  T
Q  112 gttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||    
T  26406732 gttggtttctaaaccctgttttctacacacattttcatatgata 26406775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 25838130 - 25837987
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    ||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||| |||||| | |    
T  25838130 agagactctctcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttaccaagagaattctctataaaccatagtttcttt 25838031  T
Q  112 gttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    ||||| |||||||||||||||||||| ||| |||||||||||||    
T  25838030 gttggcttctaaaccttgttttctacacacgttttcatatgata 25837987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 17841408 - 17841546
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||  || |||||||||||| ||||||||||||||||||||    
T  17841408 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatctcaaccctagtattgtttgccaagagaaattctctataaaccctagtttgta 17841507  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcat 149  Q
    || ||||||||||||| ||||||||||||||||| ||||    
T  17841508 tgatggtttctaaaccctgttttctacgcactttatcat 17841546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 31782616 - 31782738
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  31782616 agagactcaatcctaacagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattatctataaaccctagtttgta 31782715  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    |||||| ||||||||| ||||||    
T  31782716 tgttggcttctaaaccctgtttt 31782738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 2298160 - 2298305
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| ||||||||||||||||||||    
T  2298160 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgta 2298258  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt-tcatatgata 155  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||    
T  2298259 tgttggtttctaaaccttgtttttctacacacttttatcatatgata 2298305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 22672857 - 22672713
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  22672857 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 22672759  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  22672758 tgttggtttctaaaccctgtttttctacacactttatcatctgata 22672713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 35385611 - 35385755
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||||||||    
T  35385611 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagaaattctctataaaccctagtttgta 35385709  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||| |||||||||| ||| |||||||| |||||| |||| |||||    
T  35385710 tgttagtttctaaactttgtttttctacacactttatcatttgata 35385755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 40222786 - 40222642
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| | |  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  40222786 agagactcaatcctaataatactttgttcaaggtgaatcaaaacaatctcaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 40222688  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| |||||||||||| |||||||| |||||| |||| |||||    
T  40222687 tgttggcttctaaaccttgtttttctacacactttatcatctgata 40222642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 25452518 - 25452384
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| |||| |||| ||| ||| |||||||||||| ||||||||||||||||||||    
T  25452518 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaacgctagagtt-gttgccaagagaaattctctataaaccctagtttgta 25452420  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||||||||||||||| |||||||| |||||||    
T  25452419 tgttggtttctaaaccttgtttttctacacactttt 25452384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 16093450 - 16093575
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||||||| |||||||||||||||||  ||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  16093450 agagactcaatcctaatagtgtttt-ttcaaggtgaatcaaaaagatcccaaccctagtgtttgttgccaagagaaattatctataaaccctagtttgta 16093548  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  16093549 tgttggcttctaaaccctgttttctac 16093575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 1240451 - 1240307
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagag-aaatttctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| | ||||| |||| ||||||||||||||||||||    
T  1240451 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgcaaagagaaaatatctataaaccctagtttgta 1240353  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || |||||||| |||||| |||| |||||    
T  1240352 tgttggcttctaaaccctgtttttctacacactttatcatctgata 1240307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 10627387 - 10627260
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatc-aaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgt 109  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||  |||||||||||||||| | |||||||||| ||||||||| |||||||||    
T  10627387 agagactcaatcctaacagtgttttgttcaaggtgaatcaaaaacaatcctaaccctagtgtttgttgctaagagaaattctctataaacactagtttgt 10627288  T
Q  110 atgttggtttctaaaccttgttttctac 137  Q
    ||||||| ||||||||| ||||||||||    
T  10627287 atgttggcttctaaaccctgttttctac 10627260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 25445519 - 25445381
Alignment:
Q  12 agagactcaatccta----aaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtt 106  Q
    |||||||||||||||    | ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||||    
T  25445519 agagactcaatcctaatagatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagaaattctctataaaccctagtt 25445421  T
Q  107 tgtatgttggtttctaaaccttgttt-tctacgcactttt 145  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  25445420 tgtatgttggtttctaaaccttgtttatctacacactttt 25445381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 11962592 - 11962717
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||| ||||||||| |||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| ||||| |||| |||||||||    
T  11962592 agagacacaatcctaatagtgctttgttcatggtgaatcaaaacaatctcaaccctagtg-ttgttgccaagagaaattctctatgaaccatagtttgta 11962690  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  11962691 tgttggcttctaaaccctgttttctac 11962717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 1170834 - 1170702
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  1170834 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 1170736  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  1170735 tgttgg--tctaaaccttgtttttctacacactttt 1170702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 42238298 - 42238188
Alignment:
Q  40 caaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatgttggtttctaaaccttg-ttttctac 137  Q
    |||||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||    
T  42238298 caaggtgaatcaaaacaatcccaaccctagtgtt-gttgcaaagagaaattctctataaaccctagtttgtatgttggcttctaaaccctgtttttctac 42238200  T
Q  138 gcactttttcat 149  Q
     |||||| ||||    
T  42238199 acactttatcat 42238188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 28786427 - 28786291
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||  ||||||||||| |||||  |||||||| || | ||| |||||| |||||||    
T  28786427 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaattccaaccctagtg-ttgtt-gcaagagaagttctttat-aacccttgtttgta 28786331  T
Q  111 tgttggtttctaaa-ccttgttttctacgcactttttcat 149  Q
    |||||  ||||||| |||  |||||||||||| |||||||    
T  28786330 tgttgccttctaaatcctgtttttctacgcaccttttcat 28786291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 15445430 - 15445493
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtga---atcaaaacaatctcaaccctagtgt 72  Q
    |||||||||||||||| |||||||||||||||||||   |||||||||||||||||||||||||    
T  15445430 agagactcaatcctaacagtgttttgttcaaggtgaaatatcaaaacaatctcaaccctagtgt 15445493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 4897844 - 4897792
Alignment:
Q  16 actcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaacccta 68  Q
    |||||||||||| |||| |||||||||||||||| ||||||||||||||||||    
T  4897844 actcaatcctaacagtgatttgttcaaggtgaatgaaaacaatctcaacccta 4897792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 35314779 - 35314703
Alignment:
Q  57 atctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgtttt 133  Q
    ||||||||||||||||||||| ||||||||||   |||||||| |||||||||   || ||||||||||| ||||||    
T  35314779 atctcaaccctagtgtttgttgccaagagaaacccctataaactctagtttgttgttttgtttctaaaccctgtttt 35314703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 4754237 - 4754166
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaacc 126  Q
    ||||||||||||||||||||||| ||||||| ||  |||| |||||||||| | | |||||| || ||||||    
T  4754237 caatctcaaccctagtgtttgttgccaagagcaaactctacaaaccctagtgtttgtgttggcttttaaacc 4754166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 13295858 - 13295823
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtga 47  Q
    |||||||||||||||||||||||||||||| |||||    
T  13295858 agagactcaatcctaaaagtgttttgttcatggtga 13295823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 13294812 - 13294711
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatca------aaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagt 105  Q
    ||||| |||||||||| ||||||||||||||||| |||||      |  ||||| ||||||||||| ||||| ||||||||| | |||| |||| |||||    
T  13294812 agagaatcaatcctaatagtgttttgttcaaggtaaatcaatggtgattcaatcccaaccctagtgcttgttgccaagagaattctctacaaactctagt 13294713  T
Q  106 tt 107  Q
    ||    
T  13294712 tt 13294711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 29748423 - 29748349
Alignment:
Q  62 aaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttct 135  Q
    ||||||| |||||||| ||||||||| | |||| ||||||||||||   |||||| ||||||| |||||||||||    
T  29748423 aaccctactgtttgttgccaagagaattctctacaaaccctagttttcttgttggcttctaaacccttgttttct 29748349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 25351376 - 25351233
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  25351376 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 25351278  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||||| |||||| |||| |||||    
T  25351277 tgttggcttctaaaccctgttttctacacactttatcatctgata 25351233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 25357070 - 25356927
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  25357070 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 25356972  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||||| |||||| |||| |||||    
T  25356971 tgttggcttctaaaccctgttttctacacactttatcatctgata 25356927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 25410153 - 25410010
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  25410153 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 25410055  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||||| |||||| |||| |||||    
T  25410054 tgttggcttctaaaccctgttttctacacactttatcatctgata 25410010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 21369665 - 21369539
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| || ||||||||||||||||||||    
T  21369665 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctaatgtttgttgccaagagaatttctctataaaccctagtttgta 21369566  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  21369565 tgttggcttctaaaccctgttttctac 21369539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 44016820 - 44016946
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  44016820 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaaccctagtttgta 44016919  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  44016920 tgttggcttctaaaccctgttttctac 44016946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 8378663 - 8378797
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||||||||    
T  8378663 agagactcaatcttaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagaaattctctataaaccctagtttgta 8378761  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||||||||||||||| |||||||| |||||||    
T  8378762 tgttggtttctaaaccttgtttttctacacactttt 8378797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 34547022 - 34547166
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  34547022 agagactcaatcctaatagtgctctgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 34547120  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  34547121 tgttggtttctaaaccctgtttttctacacactttatcatctgata 34547166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 144
Target Start/End: Original strand, 44144025 - 44144157
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||| ||||| |||||| ||||| ||||||||||||||||||||    
T  44144025 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcataaccctagtg-ttgttgccaagaaaaattctctataaaccctagtttgta 44144123  T
Q  111 tgttggtttctaaaccttgttttctacgcacttt 144  Q
    |||||| |||||||||||||||||||| ||||||    
T  44144124 tgttggcttctaaaccttgttttctacacacttt 44144157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 44010909 - 44011035
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||| |||||| ||||| |||||||||| |||||||||    
T  44010909 agagactcaatcctaatagtgctttgttcaaggtggatcaaaacaatcccaaccctagtgtttgttgccaagaaaaattctctataaaccatagtttgta 44011008  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  44011009 tgttggcttctaaaccctgttttctac 44011035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 6067359 - 6067503
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaa-caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgta 110  Q
    ||||||| |||||||  | |||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| | |||||||||||||||||||     
T  6067359 agagactaaatcctatcaatgttttgttcaaggtgaatcaaaaacaatcccaaccctagtgtttgttaccaagagaattctctataaaccctagtttgtt 6067458  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||| | ||| ||||||| |||||    
T  6067459 tgttggcttctaaaccatgttttcttcacacgttttcatctgata 6067503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 7464677 - 7464815
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||  |||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  7464677 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatccaaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 7464775  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcat 149  Q
    |||||| || |||||| || |||||||| |||||| ||||    
T  7464776 tgttggcttttaaaccctgtttttctacacactttatcat 7464815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 42006686 - 42006565
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaa-tttctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || || |||||||||| |||||||||||| ||||||||     
T  42006686 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttcttgccaagagaaattttctataaaccatagtttgtt 42006588  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    |||||| ||||||||| ||||||    
T  42006587 tgttggcttctaaaccctgtttt 42006565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 7069803 - 7069671
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  7069803 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 7069705  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  7069704 tgttgg--tctaaaccttgtttttctacacactttt 7069671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 7074810 - 7074678
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  7074810 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 7074712  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  7074711 tgttgg--tctaaaccttgtttttctacacactttt 7074678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 15541154 - 15541286
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  15541154 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 15541252  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  15541253 tgttgg--tctaaaccttgtttttctacacactttt 15541286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 25405416 - 25405284
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  25405416 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 25405318  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  25405317 tgttgg--tctaaaccttgtttttctacacactttt 25405284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 2120922 - 2120800
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaa-aacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgt 109  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||| ||||||||| ||| ||| |||||||||| | |||||||||||||||||||    
T  2120922 agagactcaatcctaatagtgttttgtccaaggtgaatcaacaacaatcccaaccctagagtt-gttgccaagagaaaatctctataaaccctagtttgt 2120824  T
Q  110 atgttggtttctaaaccttgtttt 133  Q
    ||||||| ||||||||||||||||    
T  2120823 atgttggcttctaaaccttgtttt 2120800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 44512684 - 44512822
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaa-ccctagtgtttgttcccaagagaaatttctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||| |||||||| ||||| | |||| || | ||||||||||||||||||||    
T  44512684 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaacccctagtg-ttgttgcaaagaaaattctctataaaccctagtttgta 44512782  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcat 149  Q
    |||||||||||||||| || |||||||| |||||| ||||    
T  44512783 tgttggtttctaaaccctgtttttctacacactttatcat 44512822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 116
Target Start/End: Original strand, 1099593 - 1099697
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  1099593 agagagtcaatcctaatagtgttttgttcaacgtgaatcaaaacaatttcaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 1099691  T
Q  111 tgttgg 116  Q
    ||||||    
T  1099692 tgttgg 1099697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 30246993 - 30246872
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||| |||||||||||||||||       
T  30246993 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccgtagtg-ttgttgccaagagaaattctctataaaccctagttttgt 30246895  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    |||||| ||||||||| ||||||    
T  30246894 tgttggcttctaaaccctgtttt 30246872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 3320209 - 3320341
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||| ||| ||| |||||||||||||||||||     
T  3320209 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaatagagattctctataaaccctagtttgtt 3320307  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    |||||   ||||||||||| |||||||| |||||||    
T  3320308 tgttg--atctaaaccttgtttttctacacactttt 3320341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 3324957 - 3325089
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||| ||| ||| |||||||||||||||||||     
T  3324957 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaatagagattctctataaaccctagtttgtt 3325055  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    |||||   ||||||||||| |||||||| |||||||    
T  3325056 tgttg--atctaaaccttgtttttctacacactttt 3325089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 11081600 - 11081520
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttc 134  Q
    ||||||||||||||||||||||| ||||||||| | |||| ||||||||||||   |||||| ||||||| ||||||||||    
T  11081600 caatctcaaccctagtgtttgttgccaagagaattctctacaaaccctagttttgttgttggcttctaaacccttgttttc 11081520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 12 - 132
Target Start/End: Complemental strand, 45366656 - 45366544
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||| ||| ||| |||||||||||||||| |||       |||| ||||||||||||||||| |||| |||||  ||||||||| ||||||||| |    
T  45366656 agagactctatcataacagtgttttgttcaaggagaa-------aatcacaaccctagtgtttgttgccaaaagaaaactctataaactctagtttgt-t 45366565  T
Q  112 gttggtttctaaaccttgttt 132  Q
    ||||  |||||||||||||||    
T  45366564 gttgacttctaaaccttgttt 45366544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 6049000 - 6048882
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    ||||| |||||||||| |||||||  |||||||||||||||     || ||| ||||||||||||| ||||||||| | | || ||||||||||||  ||    
T  6049000 agagattcaatcctaatagtgtttc-ttcaaggtgaatcaa-----tcccaaacctagtgtttgttgccaagagaattctttacaaaccctagttttgat 6048907  T
Q  112 gttggtttctaaa-ccttgttttct 135  Q
    ||||| ||||||| |||||||||||    
T  6048906 gttggcttctaaacccttgttttct 6048882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 107
Target Start/End: Complemental strand, 11084469 - 11084417
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagttt 107  Q
    |||||||||||||| |||||||| ||||||||| |||||| ||||||||||||    
T  11084469 caatctcaaccctattgtttgttgccaagagaattttctacaaaccctagttt 11084417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 1099717 - 1099754
Alignment:
Q  36 tgttcaaggtgaatcaaaacaatctcaaccctagtgtt 73  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  1099717 tgttcaacgtgaatcaaaacaatctcaaccctagtgtt 1099754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 105
Target Start/End: Complemental strand, 6332313 - 6332263
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagt 105  Q
    ||||||||| ||||||||||||| ||||||| ||  |||||||||||||||    
T  6332313 caatctcaatcctagtgtttgttgccaagagtaaactctataaaccctagt 6332263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 77
Target Start/End: Original strand, 12310175 - 12310234
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgtt 77  Q
    |||||||||||||||| ||||||| ||||||||||||||||     || |||||||||||||||||    
T  12310175 agagactcaatcctaatagtgttt-gttcaaggtgaatcaa-----tcccaaccctagtgtttgtt 12310234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 109
Target Start/End: Original strand, 13290681 - 13290725
Alignment:
Q  65 cctagtgtttgttcccaagagaaatttctataaaccctagtttgt 109  Q
    ||||||||||||| ||||||||||  |||| ||||||||||||||    
T  13290681 cctagtgtttgttgccaagagaaaactctacaaaccctagtttgt 13290725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 6e-50; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 16638850 - 16638706
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  16638850 agagactcaatcctaacagtgttttgtttaaggtgaatcaaaacaatcccaaccctagtgtttgttgcaaagagaaattctctataaaccctagtttgta 16638751  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||||| ||||||||||| |||||    
T  16638750 tgttggcttctaaaccctgttttctacacactttttcatctgata 16638706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 16489372 - 16489229
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||    
T  16489372 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatctcaaccttagtg-ttgttgccaagagaaattctctataaaccctagtttgta 16489274  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| |||||||||| |||||| |||| |||||    
T  16489273 tgttggtttctaaaccctgttttctacacactttatcatctgata 16489229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 25699772 - 25699629
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  25699772 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 25699674  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| || |||||| |||||||||| |||||| ||||||||||    
T  25699673 tgttggcttttaaaccctgttttctacacactttatcatatgata 25699629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 47566516 - 47566390
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  47566516 agagactcaatcctaatagtgctttgttcaatgtgaatcaaaacaatctcaaccctagtgtttgttgccaagataaattctctataaaccctagtttgta 47566417  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  47566416 tgttggcttctaaaccctgttttctac 47566390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 15312336 - 15312218
Alignment:
Q  15 gactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatgt 113  Q
    ||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  15312336 gactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgtatgt 15312238  T
Q  114 tggtttctaaaccttgtttt 133  Q
    ||||||||||||||||||||    
T  15312237 tggtttctaaaccttgtttt 15312218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 36771419 - 36771293
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||  |||||||||||||||    
T  36771419 agagactcaatcataatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttgccaagagaaattctcttcaaaccctagtttgta 36771320  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| | ||||||||    
T  36771319 tgttggcttctaaaccctattttctac 36771293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 15831164 - 15831020
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaa-tttctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||| ||| ||||||||||||||||||||||    
T  15831164 agagactcaatcctaatagtgatttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagaaaaattttctataaaccctagtttgta 15831066  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  15831065 tgttggtttctaaaccctgtttttctacacactttatcatctgata 15831020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 18586989 - 18586845
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  18586989 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 18586891  T
Q  111 tgttggtttctaaa-ccttgttttctacgcactttttcatatgata 155  Q
    |||||||||||||| |||  |||||||| |||||| |||| |||||    
T  18586890 tgttggtttctaaaccctatttttctacacactttatcatctgata 18586845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 31300447 - 31300303
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| | |||||||||| |||||||||||||||||| |    
T  31300447 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgcaaagagaaattctctataaaccctagtttgaa 31300349  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| ||||||||||    
T  31300348 tgttggtttctaaaccctgtttttctacacactttatcatatgata 31300303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 4570117 - 4569974
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||| ||||||||||||||||||||    
T  4570117 agagactcgatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-atgttgccaagagaaattctctataaaccctagtttgta 4570019  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||  |||||||||| |||||| |||| |||||    
T  4570018 tgttggcttctaaactctgttttctacacactttatcatctgata 4569974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 13072140 - 13072265
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||| ||| |||| |||||||||||||||||||||||||| |||||||||||  |||| |||||||||||| ||||||||||||||||||||    
T  13072140 agagactcaatcataatagtgatttgttcaaggtgaatcaaaacaatcccaaccctagtg-atgttgccaagagaaattctctataaaccctagtttgta 13072238  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||||||||||||||    
T  13072239 tgttggcttctaaaccttgttttctac 13072265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 36769498 - 36769380
Alignment:
Q  16 actcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatgtt 114  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||  |||||||||||||||||||    
T  36769498 actcgatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctcttcaaaccctagtttgtatgtt 36769399  T
Q  115 ggtttctaaaccttgtttt 133  Q
    || ||||||||||||||||    
T  36769398 ggcttctaaaccttgtttt 36769380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 4556218 - 4556362
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  4556218 agagactcaatcctaatagtgctttgttcaaggtgaatcgaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 4556316  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
     ||||||||||||||| || |||||||| |||||| |||| |||||    
T  4556317 agttggtttctaaaccctgtttttctacacactttatcatctgata 4556362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 8529290 - 8529176
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||  |||| |||||||||||| ||||||||||||||||||||    
T  8529290 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-gtgttgccaagagaaattctctataaaccctagtttgta 8529192  T
Q  111 tgttggtttctaaacc 126  Q
    ||||||||||||||||    
T  8529191 tgttggtttctaaacc 8529176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 4558334 - 4558208
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||| ||||||||  | | || |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  4558334 agagactcaatcctaatagtgctttgttcaaggtaaatcaaaaacaacccagccctagtgtttgttgccaagagaaattctctataaaccctagtttgta 4558235  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  4558234 tgttggcttctaaaccctgttttctac 4558208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 15316981 - 15316860
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||| |||||||||||||  |||||||||| ||| | |||||||||||| ||||||||||||||||||||    
T  15316981 agagactcaatcctaatagtgctttgttcaaggtaaatcaaaacaatccgaaccctagtg-ttgctgccaagagaaattctctataaaccctagtttgta 15316883  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    |||||||||||||||| ||||||    
T  15316882 tgttggtttctaaaccctgtttt 15316860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 124
Target Start/End: Original strand, 25614079 - 25614191
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| |||||    
T  25614079 agagactcaattctaacagtgttttgttcaatgtgaatcaaaacaatctcaaccctagtgtttgttaccaagagaaattctctataaaccatag-ttgta 25614177  T
Q  111 tgttggtttctaaa 124  Q
    |||||| |||||||    
T  25614178 tgttggcttctaaa 25614191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 11853572 - 11853440
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||| ||| ||||||||||||||||| |     
T  11853572 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagag-ttgttgccaagagagattctctataaaccctagtttatt 11853474  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  11853473 tgttgg--tctaaaccttgtttttctacacactttt 11853440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 4884897 - 4884753
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| || ||| |||| ||||| | |||||||||| ||||||||||||| ||||||    
T  4884897 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccacccccagtg-ttgttgcaaagagaaattctctataaaccctaatttgta 4884799  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || |||||||| |||||| |||| |||||    
T  4884798 tgttggcttctaaaccctgtttttctacacactttatcatctgata 4884753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 16689099 - 16689243
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||  ||| ||||| | ||||| | |||||||||| |||||||||||||||||| |    
T  16689099 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaattccaaacctagag-ttgttgcaaagagaaattatctataaaccctagtttgaa 16689197  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  16689198 tgttggtttctaaaccctgtttttctacacactttatcatctgata 16689243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 26557752 - 26557664
Alignment:
Q  21 atcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgt 109  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  26557752 atcctaatagtgttttgtttaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaatctctataaaccctagtttgt 26557664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 55822288 - 55822169
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| ||||||||||||| |||||     
T  55822288 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctaatttgtt 55822190  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    ||||||  |||||||||||||||    
T  55822189 tgttgg--tctaaaccttgtttt 55822169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 7050416 - 7050511
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagttt 107  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||| |||||||||||||||||    
T  7050416 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcacaaccttagtg-ttgttgccaagagaaattctctataaaccctagttt 7050511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 32274087 - 32274181
Alignment:
Q  38 ttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgtttt 133  Q
    ||||||||||||||||||||||||||| |||||||||||| |||| |||||| ||||||||| ||||||||| |||||| ||||||||||||||||    
T  32274087 ttcaaggtgaatcaaaacaatctcaactctagtgtttgttgccaatagaaatctctataaactctagtttgt-tgttggcttctaaaccttgtttt 32274181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 4874638 - 4874759
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||| ||| ||| ||||||||| ||||||||||||||||||| | |||| ||||||||||||  | |||||| | ||| |||| |||||||||| |    
T  4874638 agagactctatcttaatagtgttttgatcaaggtgaatcaaaacaaacccaactctagtgtttgttgtctagagaattctctttaaatcctagtttgttt 4874737  T
Q  112 gttggtttctaaaccttgtttt 133  Q
    ||||| ||||||||||||||||    
T  4874738 gttggcttctaaaccttgtttt 4874759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 126
Target Start/End: Original strand, 3982342 - 3982450
Alignment:
Q  16 actcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttg 115  Q
    |||||||||||| |||||||  | |||||||||| ||||||||||||||||||||||||||| |||||||||||  |||| ||||||||||||| ||||     
T  3982342 actcaatcctaatagtgtttc-tccaaggtgaataaaaacaatctcaaccctagtgtttgttgccaagagaaatcactatgaaccctagtttgt-tgttt 3982439  T
Q  116 gtttctaaacc 126  Q
    |||||| ||||    
T  3982440 gtttctgaacc 3982450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 16185995 - 16186108
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| |    |  |||||||| ||| ||||||||||||||| |    
T  16185995 agagactcaatcctaacagtgttttgttcaaggtgaatcaaaacaatcccaaccttagtgtctcccgcttagagaaatctctctaaaccctagtttgt-t 16186093  T
Q  112 gttggtttctaaacc 126  Q
    ||| |||||||||||    
T  16186094 gtttgtttctaaacc 16186108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 104
Target Start/End: Original strand, 5336941 - 5337035
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaacc--ctagtgtttgttcccaagagaaatttctataaaccctag 104  Q
    |||||||||||||||| |||||||| |||||||||| |||||||||||||||||   ||||||||||| |||| |||| | ||||||||||||||    
T  5336941 agagactcaatcctaacagtgttttattcaaggtgagtcaaaacaatctcaaccatatagtgtttgttgccaatagaattctctataaaccctag 5337035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 10113005 - 10112925
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttc 134  Q
    ||||||||||||||||||||||| ||||||| ||  |||| |||||||||||| | |||||| ||||||| ||||||||||    
T  10113005 caatctcaaccctagtgtttgttgccaagagcaaactctacaaaccctagtttttgtgttggcttctaaacccttgttttc 10112925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 38208880 - 38208961
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttct 135  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||| |||| |   ||||||| ||||||| |||||||||||    
T  38208880 caatctcaaccctagtgtttgttgccaagagaattttctacaaacgctagatatgatgttggcttctaaacccttgttttct 38208961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 9022440 - 9022359
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttct 135  Q
    ||||| ||||| ||||||||||| ||||||||| | |||| ||||||||||||  ||||||  ||||||| |||||||||||    
T  9022440 caatcccaaccatagtgtttgttgccaagagaattctctacaaaccctagttttgatgttgacttctaaacccttgttttct 9022359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 23001582 - 23001660
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat-gttggtttctaaaccttgtttt 133  Q
    ||||||||| ||||||| |||||  ||| |||||| ||||||||||||||||| ||| ||||| |||||| |||||||||    
T  23001582 caatctcaatcctagtgattgttgtcaaaagaaatctctataaaccctagttt-tatggttggcttctaatccttgtttt 23001660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 5516453 - 5516531
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgtttt 133  Q
    ||||| ||||||||||||||||| |||| |||||| |||| |||||||| |||   |||||| |||||| | |||||||    
T  5516453 caatcccaaccctagtgtttgttgccaaaagaaatctctacaaaccctatttttgttgttggattctaagctttgtttt 5516531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 52043579 - 52043660
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttct 135  Q
    ||||| ||||||||||||||| |  |||||||||  |||| ||||| ||||||  ||||||| ||||||| |||||||||||    
T  52043579 caatcccaaccctagtgtttgctgacaagagaaaactctacaaaccttagttttgatgttggcttctaaacccttgttttct 52043660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 47151090 - 47151169
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttc 134  Q
    |||| |||||||||||||| ||| ||||||| ||  |||||||||| |||||| | |||||| ||||||| ||||||||||    
T  47151090 caatttcaaccctagtgttggttaccaagagcaaactctataaaccttagttt-tgtgttggcttctaaacccttgttttc 47151169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 1e-48; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 30423235 - 30423109
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||     
T  30423235 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcagccctagtgtttgttgccaagagaaattctctataaaccctagtttgtt 30423136  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  30423135 tgttggcttctaaaccctgttttctac 30423109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 2267182 - 2267326
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  2267182 agagactcaatcctaacagtgttttgttcaacgtgaatcaaaacaatctcaaccgtagtgtttgttgccaagagaaattctctataaaccctagtttgta 2267281  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||||| ||| | ||||| |||||    
T  2267282 tgttggcttctaaaccatgttttctacacacatattcatctgata 2267326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 28895525 - 28895404
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||||||||||    
T  28895525 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagag-ttgttgccaagagaaattctctataaaccctagtttgta 28895427  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    |||||||||||||||||||||||    
T  28895426 tgttggtttctaaaccttgtttt 28895404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 33032677 - 33032552
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  33032677 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatctcaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 33032579  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  33032578 tgttggcttctaaaccatgttttctac 33032552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 9021266 - 9021410
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||| ||||| | |||||||||| ||||||||||||||||||||    
T  9021266 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatccgaaccctagtg-ttgttgcaaagagaaattctctataaaccctagtttgta 9021364  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  9021365 tgttggtttctaaaccctgtttttctacacactttatcatctgata 9021410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 21033893 - 21033749
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  21033893 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaagcctagtg-ttgttgccaagagaaattatctataaaccctagtttgta 21033795  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || |||||||| |||||| |||| |||||    
T  21033794 tgttggcttctaaaccctgtttttctacacactttatcatctgata 21033749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 590817 - 590696
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| |||||| |||| ||||| |||||||||||| ||||||||||||||||||||    
T  590817 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaacccaagtg-ttgttgccaagagaaattctctataaaccctagtttgta 590719  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    |||||||||||||||| ||||||    
T  590718 tgttggtttctaaaccctgtttt 590696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 23179720 - 23179841
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  23179720 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 23179818  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    |||||| ||||||||| ||||||    
T  23179819 tgttggcttctaaaccctgtttt 23179841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 29554944 - 29555088
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||| |||||||||||||||    
T  29554944 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctaaaaaccctagtttgta 29555042  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    || ||||||||||||| || |||||||| |||||| |||| |||||    
T  29555043 tgatggtttctaaaccctgtttttctacacactttatcatctgata 29555088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 17799583 - 17799708
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||||||||||    
T  17799583 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgcctagacaaattctctataaatcctagtttgta 17799681  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  17799682 tgttggcttctaaaccctgttttctac 17799708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 26268395 - 26268510
Alignment:
Q  18 tcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatgttgg 116  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||| ||||||||||||||||||||||| ||    
T  26268395 tcaatcttaatagtgttttgttcaaggtgaatcaaaacaatctcaactctagtg-ttgttgccaagagaaattctctataaaccctagtttgtatgtagg 26268493  T
Q  117 tttctaaaccttgtttt 133  Q
     ||||||||||||||||    
T  26268494 cttctaaaccttgtttt 26268510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 28327931 - 28327799
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  28327931 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 28327833  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  28327832 tgttgg--tctaaaccttgtttttctacacactttt 28327799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 16752681 - 16752800
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  16752681 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 16752779  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    ||||||  |||||||||||||||    
T  16752780 tgttgg--tctaaaccttgtttt 16752800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 17847701 - 17847581
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||| ||||| ||||||||||| || |||||||| |||||||||| |||||||| |    
T  17847701 agagattcaatcctaatagtgtttcgttcaaggtgaatcaaaacaatcccaaccatagtgtttgttgcctagagaaatctctataaaccttagtttgt-t 17847603  T
Q  112 gttggtttctaaaccttgtttt 133  Q
    |||  |||||||||||||||||    
T  17847602 gttcatttctaaaccttgtttt 17847581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 16757426 - 16757545
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||  ||||||| ||| |||||||||||||||||||     
T  16757426 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgtcaagagagattctctataaaccctagtttgtt 16757524  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    ||||||  |||||||||||||||    
T  16757525 tgttgg--tctaaaccttgtttt 16757545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 4812648 - 4812778
Alignment:
Q  14 agactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatg 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| ||||| ||||||||||||| ||    
T  4812648 agactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctatgaaccctagtttgtttg 4812746  T
Q  113 ttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||  ||||||||||| |||||||| |||||||    
T  4812747 ttgg--tctaaaccttgtttttctacacactttt 4812778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 28332654 - 28332522
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| | |||||||||||||||||     
T  28332654 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttaccaagagagattctttataaaccctagtttgtt 28332556  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    | ||||  ||||||||||| |||||||| |||||||    
T  28332555 tattgg--tctaaaccttgtttttctacacactttt 28332522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 25684666 - 25684534
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    ||||| |||||||||| |||| |||||||||||||||||||||||||| ||||||||| | ||||| | |||||| ||| |||||||||||||||||||     
T  25684666 agagattcaatcctaatagtgatttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgctaagagagattctctataaaccctagtttgtt 25684568  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  25684567 tgttgg--tctaaaccttgtttttctacacactttt 25684534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 15949557 - 15949436
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||  ||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||||   ||||||| | ||| ||||||||||||||| |    
T  15949557 agagactatatcctaatagtgttttgttcaaggtgaatccaaacaatcacaaacctagtgtttgttgtaaagagaattctctgtaaaccctagtttgtgt 15949458  T
Q  112 gttggtttctaaaccttgtttt 133  Q
    ||||| || |||||| ||||||    
T  15949457 gttggcttttaaaccctgtttt 15949436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 3276367 - 3276229
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||| ||||||||||||| ||||||| | | ||||| | |||| ||||| ||||||||||||||||| |     
T  3276367 agagactcaatcctaatagtgctttgttcaaggtaaatcaaaacaatcccaaccctggag-ttgttgcaaagaaaaattctctataaaccctagtttttg 3276269  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcat 149  Q
    |||||| ||||||||| || |||||||| |||||| ||||    
T  3276268 tgttggcttctaaaccctgtttttctacacactttatcat 3276229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 133
Target Start/End: Complemental strand, 15944869 - 15944775
Alignment:
Q  39 tcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgtttt 133  Q
    ||||||||||||||| |||||  |||||||||||||||| ||||||||  | ||||||||||||| ||||| |||| | ||||||||| ||||||    
T  15944869 tcaaggtgaatcaaagcaatcagaaccctagtgtttgttgccaagagatttctctataaaccctaatttgtttgttagcttctaaaccctgtttt 15944775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 28228537 - 28228416
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||| ||| ||||||| ||||||||||||||||||||| | |||| |   |||| ||||||||||| |||| |||| | |||||||||| |||||| | |    
T  28228537 agagtctctatcctaatagtgttttgttcaaggtgaataacaacagttctaaccatagtgtttgttgccaaaagaattctctataaaccttagtttattt 28228438  T
Q  112 gttggtttctaaaccttgtttt 133  Q
    ||||  ||||||||| ||||||    
T  28228437 gttgccttctaaaccatgtttt 28228416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 6376164 - 6376042
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||   ||| ||||||| |    |  |||||||| ||| ||||||||||||||| |    
T  6376164 agagactcaatcttaacagtgttttgttcaaggtgaatcaaaacaattcaaactctagtgtctcccgcttagagaaatctctctaaaccctagtttgt-t 6376066  T
Q  112 gttggtttc-taaaccttgttttc 134  Q
    ||| ||||| ||| ||||||||||    
T  6376065 gtttgtttcataacccttgttttc 6376042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 33021079 - 33021170
Alignment:
Q  35 ttgttcaaggtgaatcaaaacaatctcaaccctag---tgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaac 125  Q
    ||||||||||||||||||||||||||||| |||||   |||||||| | ||||||||| | |||||| |||||||||| |||| ||||||||||    
T  33021079 ttgttcaaggtgaatcaaaacaatctcaatcctagtgttgtttgttgctaagagaaatctatataaa-cctagtttgt-tgtttgtttctaaac 33021170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 31573922 - 31573995
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaacctt 128  Q
    ||||| ||||| ||||||||||| ||||||||||  |||| ||| ||||||||   |||||| |||||||||||    
T  31573922 caatcccaaccatagtgtttgttgccaagagaaaactctacaaatcctagttttcgtgttggcttctaaacctt 31573995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 13985239 - 13985278
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaa 52  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  13985239 agagactcaatcctaatagtgtttt-ttcaaggtgaatcaa 13985278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 3091265 - 3091409
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  3091265 agagactcaatcctagcggtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttaccaagagaaattctctataaaccctagtttgta 3091364  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||||| ||| | ||||| |||||    
T  3091365 tgttggcttctaaaccctgttttctacacacatattcatctgata 3091409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 4144842 - 4144967
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  4144842 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgttt-ttgccaagagaaattctctataaaccctagtttgta 4144940  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||| ||||||||||    
T  4144941 tgttggcttctaaaccctgttttctac 4144967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 14997063 - 14996929
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||| || ||||||||| | | ||||||||||||||||| |    
T  14997063 agagactcaatcctaacagtgttttgttcaaggtgaataaaaacaatcccaaccctagtgtttattaccaagagaattctttataaaccctagtttgttt 14996964  T
Q  112 gttggtttctaaaccttgttttctacgcacttttt 146  Q
    ||||| ||||||||| |||||||||| ||||||||    
T  14996963 gttggcttctaaaccctgttttctacacacttttt 14996929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 9526489 - 9526345
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||||||||    
T  9526489 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagaaattctctataaaccctagtttgta 9526391  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  9526390 tgttggtttctaaaccctgtttttctacacactttatcatctgata 9526345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 25134094 - 25133951
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||| ||||||||||||||||||||    
T  25134094 agagactcaatcctaatagtgatttgttcaaggtgaatcaaaacaatcacaaccatagtg-ttgttgccaagagaaattctctataaaccctagtttgta 25133996  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||||| || ||| |||| |||||    
T  25133995 tgttggcttctaaaccctgttttctacacattttatcatctgata 25133951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 21353505 - 21353649
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  21353505 agagactcaatcctaatagtgcgttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttaccaagagaaattctctataaaccctagtttgta 21353603  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || |||||||| |||||| |||| |||||    
T  21353604 tgttggcttctaaaccctgtttttctacacactttatcatctgata 21353649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 2393441 - 2393584
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| || || |||||||||||| |||||||||| ||||||| |    
T  2393441 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttattgccaagagaaattctctataaaccttagtttgca 2393539  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| |||||||||||||||||||| |  |||||||| |||||    
T  2393540 tgttggcttctaaaccttgttttctactctgtttttcatctgata 2393584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 9521738 - 9521604
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||    |||| |||||||||||| ||||||||||||||||||||    
T  9521738 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctag-aaatgttaccaagagaaattctctataaaccctagtttgta 9521640  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||||||||||||||| |||||||| |||||||    
T  9521639 tgttggtttctaaaccttgtttttctacacactttt 9521604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 2232620 - 2232488
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  | ||||| |||||||| ||| |||||||||||||||||||     
T  2232620 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctaaag-ttgttgccaagagagattctctataaaccctagtttgtt 2232522  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  2232521 tgttgg--tctaaaccttgtttttctacacactttt 2232488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 46783166 - 46783052
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||| ||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||| | |||| || | |||||||||| |||||||| |    
T  46783166 agagtctctatcctaacagtgctttgttcaaggtgaatcaaaacgatctcaaccctagtgtttgttgcaaagataattctctataaaccatagtttgttt 46783067  T
Q  112 gttggtttctaaacc 126  Q
    ||||| |||||||||    
T  46783066 gttggcttctaaacc 46783052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 100
Target Start/End: Original strand, 2401380 - 2401468
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaacc 100  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||    
T  2401380 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatctcaaccctagtg-ttgttgccaagagaaattctctataaacc 2401468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 129
Target Start/End: Complemental strand, 14353038 - 14352964
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttg 129  Q
    ||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||   |||||| |||||| |||||    
T  14353038 caatctcaaacctagtgtttgttgccaagagaaatctctacaaaccctagttttgttgttggcttctaatccttg 14352964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 106
Target Start/End: Original strand, 13785483 - 13785531
Alignment:
Q  58 tctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtt 106  Q
    |||||| ||||||||||||| ||||||||||| |||| |||||||||||    
T  13785483 tctcaatcctagtgtttgttgccaagagaaatctctacaaaccctagtt 13785531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 134
Target Start/End: Original strand, 20566847 - 20566947
Alignment:
Q  31 tgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgt 130  Q
    ||||| ||| |||||||||||||| ||||  |||||||||||||||   |||||||||  ||||| |||| |||||||| |||| | ||||||||| |||    
T  20566847 tgtttagtttaaggtgaatcaaaataatcctaaccctagtgtttgtcgtcaagagaaa--tctattaaccttagtttgt-tgtttgcttctaaaccctgt 20566943  T
Q  131 tttc 134  Q
    ||||    
T  20566944 tttc 20566947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 19702021 - 19702147
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  19702021 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaacgctagtttgta 19702120  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||| ||||||||||||||||||||    
T  19702121 tgttggcttctaaaccttgttttctac 19702147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 17695010 - 17695154
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||    
T  17695010 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagt-tttgttgccaagagaaattctctataaaccctagtttgta 17695108  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  17695109 tgttggtttctaaaccctgtttttctacacactttatcatctgata 17695154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 3577673 - 3577817
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| | |||||||||| ||||||||||||||||||||    
T  3577673 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgcaaagagaaattctctataaaccctagtttgta 3577771  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    ||||||||| |||||| || |||||||| |||||| |||| |||||    
T  3577772 tgttggtttttaaaccctgtttttctacacactttatcatctgata 3577817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 25466058 - 25466202
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| | || |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||    
T  25466058 agagactcaatcctaataatgctttgttcaaggtgaatcaaaacaatctcaaccttagtg-ttgttgccaagagaaattctctataaaccctagtttgta 25466156  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  25466157 tgttggtttctaaaccctgtttttctacacactttatcatctgata 25466202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 22342960 - 22343104
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||| ||||||||| |||| |||||||||| ||||||||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||||||||||    
T  22342960 agagacgcaatcctaatagtgctttgttcaagttgaatcaaaacaatctcaaccctagtg-ttgttgccaagagagattctctataaaccctagtttgta 22343058  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || |||||||| |||||| ||||||||||    
T  22343059 tgttggcttctaaaccctgtttttctacacactttatcatatgata 22343104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 22352011 - 22352155
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  22352011 agagactcaatcctaatagtgctttgttcaaggtgattcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 22352109  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || |||||||| |||||| |||| |||||    
T  22352110 tgttggcttctaaaccctgtttttctacacactttatcatctgata 22352155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 13467622 - 13467766
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| | |||| ||||| ||||||||||||||||||||    
T  13467622 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgcaaagataaattctctataaaccctagtttgta 13467720  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || |||||||| |||||| |||| |||||    
T  13467721 tgttggcttctaaaccctgtttttctacacactttatcatttgata 13467766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 26643199 - 26643075
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||| ||||   ||||||||||| ||||||||||||||||||||    
T  26643199 agagactcaatcctaatagtgatttgttcgaggtgaatcaaaacaatcccaaccctagtg-ttgtgggcaagagaaattctctataaaccctagtttgta 26643101  T
Q  111 tgttggtttctaaaccttgttttcta 136  Q
    |||||| |||||||||||||||||||    
T  26643100 tgttggcttctaaaccttgttttcta 26643075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 26749165 - 26749041
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||||| ||||||||||| ||||   ||||||||||| ||||||||||||||||||||    
T  26749165 agagactcaatcctaatagtgatttgttcgaggtgaatcaaaacaatcccaaccctagtg-ttgtgggcaagagaaattctctataaaccctagtttgta 26749067  T
Q  111 tgttggtttctaaaccttgttttcta 136  Q
    |||||| |||||||||||||||||||    
T  26749066 tgttggcttctaaaccttgttttcta 26749041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 13 - 133
Target Start/End: Original strand, 24542834 - 24542953
Alignment:
Q  13 gagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatg 112  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| |||||||  ||    
T  24542834 gagactctatcctaaaagtgttttattcaaggtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaatctctataaaccatagtttg-gtg 24542932  T
Q  113 ttggtttctaaaccttgtttt 133  Q
    |||| ||||||||||| ||||    
T  24542933 ttggcttctaaaccttatttt 24542953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 17036078 - 17035974
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  17036078 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 17035980  T
Q  111 tgttgg 116  Q
    ||||||    
T  17035979 tgttgg 17035974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 13878750 - 13878618
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  13878750 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 13878652  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  13878651 tgttgg--tctaaaccttgtttttctacacactttt 13878618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 13883498 - 13883366
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  13883498 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 13883400  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  13883399 tgttgg--tctaaaccttgtttttctacacactttt 13883366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 16785942 - 16785810
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  16785942 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 16785844  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  16785843 tgttgg--tctaaaccttgtttttctacacactttt 16785810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 31248873 - 31249005
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  31248873 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 31248971  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  31248972 tgttgg--tctaaaccttgtttttctacacactttt 31249005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 35201485 - 35201617
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  35201485 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 35201583  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  35201584 tgttgg--tctaaaccttgtttttctacacactttt 35201617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 26887383 - 26887502
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  26887383 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 26887481  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    ||||||  |||||||||||||||    
T  26887482 tgttgg--tctaaaccttgtttt 26887502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 33215850 - 33215712
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||| ||||| | |||||||||| ||||||||||||||||||||    
T  33215850 agagactcaatcctaatagtgctttattcaaggtgaatcaaaacaatcacaaccctagtg-ttgttgcaaagagaaattctctataaaccctagtttgta 33215752  T
Q  111 tgttggtttctaaac-cttgttttctacgcactttttcat 149  Q
    |||||| |||||||| ||  |||||||| |||||| ||||    
T  33215751 tgttggcttctaaactctgtttttctacacactttatcat 33215712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 25941667 - 25941524
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| | || |||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| ||||| |||||||||||| |    
T  25941667 agagactcaatcctaataatgctttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttaccaagagaaattctctat-aaccctagtttgaa 25941570  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  25941569 tgttggtttctaaaccatgtttttctacacactttatcatctgata 25941524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 12166305 - 12166397
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaacccta 103  Q
    ||||||||||||||||  ||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  12166305 agagactcaatcctaatggtgctttgttcaacgtgaatcaaaacaatcccaaccctagtgtttgttgccaagagaaattctctataaacccta 12166397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 12 - 137
Target Start/End: Original strand, 5165974 - 5166099
Alignment:
Q  12 agagactcaatcctaaa-agtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgt 109  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||  || || ||  |||||||| |||||||||||||| ||||    
T  5165974 agagactcaatcctaaacagtgttttgttcaaagtgaatcaaaac-atcccaaccctagt-attcttgccttgagaaattctctataaaccctagcttgt 5166071  T
Q  110 atgttggtttctaaaccttgttttctac 137  Q
    ||||||| ||||||||| ||||||||||    
T  5166072 atgttggcttctaaaccctgttttctac 5166099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 22858150 - 22858231
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttct 135  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||||| | |||| | ||||||| |||||||||||    
T  22858150 caatctcaaccctagtgtttgttaccaagagaaaattctacaaaccctagtttttgtgttagcttctaaacccttgttttct 22858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 109
Target Start/End: Complemental strand, 7293958 - 7293862
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgt 109  Q
    |||||||| ||| ||| ||||||| |||||||||||   ||||||||  |||||||||||||| || ||||||||||| ||||| |||||||||||||    
T  7293958 agagactctatcttaatagtgttt-gttcaaggtgagcgaaaacaataccaaccctagtgtttcttaccaagagaaatctctatgaaccctagtttgt 7293862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 30445633 - 30445552
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaacc-ttgttttct 135  Q
    ||||||||||| ||||||||||| ||||||||| | |||| ||||||||||||  ||||||| ||||||||| |||||||||    
T  30445633 caatctcaaccgtagtgtttgttgccaagagaattatctacaaaccctagttttaatgttggcttctaaaccattgttttct 30445552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 20526960 - 20526855
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||||||||||| |||||||  | ||||||||||     |||||||||||||||||||||||  |||||| ||  |||| || ||||||||| | |    
T  20526960 agagactcaatcctaatagtgttt--tccaaggtgaat-----caatctcaaccctagtgtttgttgtcaagagcaaactctacaacccctagtttttgt 20526868  T
Q  112 gttggtttctaaa 124  Q
    |||||||||||||    
T  20526867 gttggtttctaaa 20526855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 94; Significance: 9e-46; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 188401 - 188545
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  188401 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 188499  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  188500 tgttggtttctaaaccctgtttttctacacactttatcatctgata 188545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 5858567 - 5858425
Alignment:
Q  14 agactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatg 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||    
T  5858567 agactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgtatg 5858469  T
Q  113 ttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||| || |||||||| |||||| |||| |||||    
T  5858468 ttggtttctaaaccctgtttttctacacactttatcatctgata 5858425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 47878330 - 47878474
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  47878330 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 47878428  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  47878429 tgttggtttctaaaccctgtttttctacacactttatcatctgata 47878474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 47883041 - 47883184
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| ||||| |||||||||||| ||||||||||||||||||||    
T  47883041 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccatagtg-ttgttgccaagagaaattatctataaaccctagtttgta 47883139  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||| | |||||||||| |||||| |||| |||||    
T  47883140 tgttggcttctaaatcctgttttctacacactttatcatctgata 47883184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 22626143 - 22626287
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| || |||||||||||||||||    
T  22626143 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagaaattctccataaaccctagtttgta 22626241  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  22626242 tgttggtttctaaaccctgtttttctacacactttatcatctgata 22626287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 13893485 - 13893341
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaa-caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgta 110  Q
    ||||||||||| ||||  || |||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||| | ||||||||||||||||| ||    
T  13893485 agagactcaattctaacggtattttgttcaaggtgaatcaaaaacaatcccaaccctagtgtttgttgccaagagaattctctataaaccctagttttta 13893386  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||  |||||||||||||||||||| ||||||||||| |||||    
T  13893385 tgttgacttctaaaccttgttttctacacactttttcatttgata 13893341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 27762145 - 27762287
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  27762145 agagactcaatcctaatagtgctttgtttaaggtgaatcaaaacaatctcaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 27762243  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || ||||||| |||||| |||| |||||    
T  27762244 tgttggcttctaaaccctg-tttctacacactttatcatctgata 27762287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 54193249 - 54193104
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaa-caatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgt 109  Q
    |||||||||||||||| |||| ||||||||||||||||||||| ||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  54193249 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgt 54193151  T
Q  110 atgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    ||||||||||||||||| || |||||||| |||||| |||| |||||    
T  54193150 atgttggtttctaaaccctgtttttctacacactttatcatctgata 54193104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 10612941 - 10613081
Alignment:
Q  16 actcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatgtt 114  Q
    |||||||| ||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||    
T  10612941 actcaatcttaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgtatgtt 10613039  T
Q  115 ggtttctaaa-ccttgttttctacgcactttttcatatgata 155  Q
    |||||||||| |||  |||||||| |||||| ||||||||||    
T  10613040 ggtttctaaaccctatttttctacacactttatcatatgata 10613081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 10897028 - 10896884
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    ||||| |||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  10897028 agagaatcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 10896930  T
Q  111 tgttggtttctaaa-ccttgttttctacgcactttttcatatgata 155  Q
    |||||||||||||| |||  |||||||| |||||| |||| |||||    
T  10896929 tgttggtttctaaaccctatttttctacacactttatcatctgata 10896884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 16462226 - 16462092
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |  ||||| | |||||||||| ||| ||||||||||||||||    
T  16462226 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaacccta-tagttgttgctaagagaaattctctgtaaaccctagtttgta 16462128  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||||||||||||||| |||||||| |||||||    
T  16462127 tgttggtttctaaaccttgtttttctacacactttt 16462092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 29914112 - 29914246
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||| |    
T  29914112 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgaa 29914210  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    |||||| ||||||||| || |||||||| |||||||    
T  29914211 tgttggcttctaaaccctgtttttctacacactttt 29914246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 38002892 - 38002767
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  38002892 agagactcaaacctaatggtgttttgttcaaggtgaatcaaaacaatctcaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 38002794  T
Q  111 tgttggtttctaaaccttgttttctac 137  Q
    |||||  ||||||| | ||||||||||    
T  38002793 tgttgacttctaaatcctgttttctac 38002767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 20 - 135
Target Start/End: Complemental strand, 3329908 - 3329792
Alignment:
Q  20 aatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatgttggtt 118  Q
    |||||||| |||| ||||||||||||||||||||||| || |||||||||||||| || |||||||||||| |||||||||||||||||||||||||| |    
T  3329908 aatcctaatagtgctttgttcaaggtgaatcaaaacattcccaaccctagtgtttattgccaagagaaattctctataaaccctagtttgtatgttggct 3329809  T
Q  119 tctaaaccttgttttct 135  Q
    |||||||| ||||||||    
T  3329808 tctaaaccctgttttct 3329792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 10949419 - 10949561
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||  ||||||||||||||||||||||||||  |||||||| ||| ||| |||||||||||| ||||||||||||||||||||    
T  10949419 agagactcaatcctaatagtactttgttcaaggtgaatcaaaacaatcg-aaccctagagtt-gttgccaagagaaattctctataaaccctagtttgta 10949516  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||||| |||||| |||| |||||    
T  10949517 tgttggcttctaaaccctgttttctacacactttatcatctgata 10949561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 11079540 - 11079397
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  11079540 agagactcaatcctgatagtgttttgttcaagatgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 11079442  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || | | ||| |||||| |||| |||||    
T  11079441 tgttggcttctaaaccctgctatatacacactttatcatctgata 11079397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 10595193 - 10595323
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    ||||||| |||||||| |||| |||||||| |||||||||||||||||  |||||||||||| ||| |||||| ||||| ||||||||||||||||||||    
T  10595193 agagacttaatcctaatagtgctttgttcatggtgaatcaaaacaatccaaaccctagtgtt-gttgccaagataaattctctataaaccctagtttgta 10595291  T
Q  111 tgttggtttctaaaccttgttttctacgcact 142  Q
    |||||||||||||||||| |||||||| ||||    
T  10595292 tgttggtttctaaacctttttttctacacact 10595323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 4535637 - 4535493
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||| | ||||||||||| ||||| |||||||||||| ||||| ||||||||||||||    
T  4535637 agagactcaatcctaacggtgttttgttcaaagtgaatcaaaacaaacccaaccctagtg-ttgttgccaagagaaattctctatgaaccctagtttgta 4535539  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || |||||||| |||||| |||| |||||    
T  4535538 tgttggcttctaaaccctgtttttctacacactttatcatctgata 4535493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 6303333 - 6303201
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  6303333 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 6303235  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  6303234 tgttgg--tctaaaccttgtttttctacacactttt 6303201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 10094233 - 10094365
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  10094233 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 10094331  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  10094332 tgttgg--tctaaaccttgtttttctacacactttt 10094365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 10100250 - 10100382
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  10100250 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 10100348  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  10100349 tgttgg--tctaaaccttgtttttctacacactttt 10100382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 10201113 - 10201245
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  10201113 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 10201211  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  10201212 tgttgg--tctaaaccttgtttttctacacactttt 10201245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 27544296 - 27544177
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  27544296 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 27544198  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    ||||||  |||||||||||||||    
T  27544197 tgttgg--tctaaaccttgtttt 27544177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 16996898 - 16996780
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||||||||||| |||||||| ||| ||||||||||||||| |  |||||||||||||| || ||||||||| | ||||||||||||||||||| |    
T  16996898 agagactcaatcctaacagtgttttattctaggtgaatcaaaacatttccaaccctagtgtttattaccaagagaattctctataaaccctagtttgttt 16996799  T
Q  112 gttggtttctaaaccttgt 130  Q
    ||||| |||||||||||||    
T  16996798 gttggcttctaaaccttgt 16996780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 10208159 - 10208291
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  10208159 agagactcaatcgtaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 10208257  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  10208258 tgttgg--tctaaaccttgtttttctacacactttt 10208291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 54188532 - 54188410
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaa-caatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgt 109  Q
    ||||||||||| |||| |||| ||||||||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  54188532 agagactcaattctaatagtgctttgttcaaggtgaatcaaaaacaatcccaaacctagtgtt-gttgccaagagaaattctctataaaccttagtttgt 54188434  T
Q  110 atgttggtttctaaaccttgtttt 133  Q
    ||||||||||||||||| ||||||    
T  54188433 atgttggtttctaaaccctgtttt 54188410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 15823788 - 15823889
Alignment:
Q  31 tgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgt 130  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||  ||||||||||||||||||| |||||| ||| |||||||||    
T  15823788 tgttttgttcaaggtgaatcaaaacaatctcagccctagtgtttgtttcaaagagaaaactctataaaccctagtttgt-tgttggcttccaaaccttgt 15823886  T
Q  131 ttt 133  Q
    |||    
T  15823887 ttt 15823889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 133
Target Start/End: Complemental strand, 26763061 - 26762941
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtat 111  Q
    |||||||  ||||||| | |||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||| |||||||| |||||||||| |    
T  26763061 agagactttatcctaataatgttttgtccaaggtgaatcaaatcaatcacaaccctagtgtttgttcccaggagaaatctctataaatcctagtttgt-t 26762963  T
Q  112 gttggtttctaaaccttgtttt 133  Q
    ||| ||||||||||| ||||||    
T  26762962 gttcgtttctaaaccctgtttt 26762941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 109
Target Start/End: Original strand, 20031477 - 20031574
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgt 109  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||| ||||||||||    
T  20031477 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaagcctagtttgt 20031574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 27703338 - 27703450
Alignment:
Q  21 atcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttcta-taaaccctagtttgtatgttggttt 119  Q
    ||||||| | |||||||||||||||||||||||||||||  || ||||||||||| | ||||||||||| ||||  |||||||||||| | |||| | ||    
T  27703338 atcctaacaatgttttgttcaaggtgaatcaaaacaatccaaatcctagtgtttgatgccaagagaaatctctacaaaaccctagtttct-tgtttgctt 27703436  T
Q  120 ctaaaccttgtttt 133  Q
    ||||||||||||||    
T  27703437 ctaaaccttgtttt 27703450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Original strand, 46966817 - 46966921
Alignment:
Q  22 tcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttct 121  Q
    |||||| | ||||||||| ||| |||||| |||||||||||||||||||||||||| ||||||| ||| |||||||||| || |||   |||||| ||||    
T  46966817 tcctaacattgttttgtttaagatgaatcgaaacaatctcaaccctagtgtttgttgccaagaggaatctctataaaccttaattttgttgttggcttct 46966916  T
Q  122 aaacc 126  Q
    |||||    
T  46966917 aaacc 46966921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 7418085 - 7417967
Alignment:
Q  14 agactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatg 112  Q
    |||||||||| |||  |||||||||||||||||||| |||||||||     | |||||||  || |||||||||||| | ||||||||||||||| ||||    
T  7418085 agactcaatcataatggtgttttgttcaaggtgaattaaaacaatc-----cttagtgtta-ttgccaagagaaattctttataaaccctagtttttatg 7417992  T
Q  113 ttggtttctaaaccttgttttctac 137  Q
    |||| |||||||||  |||||||||    
T  7417991 ttggcttctaaaccccgttttctac 7417967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 48390445 - 48390523
Alignment:
Q  79 ccaagagaaatt-tctataaaccctagtttgtatgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||||| || |||||||| |||||| |||| |||||    
T  48390445 ccaagagaaattctctataaaccctagtttgtatgtcggcttctaaaccctgtttttctacacactttatcatctgata 48390523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 42297838 - 42297876
Alignment:
Q  35 ttgttcaaggtgaatcaaaacaatctcaaccctagtgtt 73  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  42297838 ttgttcaaggtgaatcaaaacaatctcaatcctagtgtt 42297876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 134
Target Start/End: Complemental strand, 7768670 - 7768552
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctag--tgtttgttcccaagagaaatttctataaaccctagtttgt 109  Q
    |||||||||||||||| |||||||  | ||||||||||     ||||||||||| |||  |||||||| ||||||||| | |||| ||||| ||||||      
T  7768670 agagactcaatcctaatagtgttt--tccaaggtgaat-----caatctcaaccttagtttgtttgttgccaagagaattctctacaaaccttagttttg 7768578  T
Q  110 atgttggtttctaaa-ccttgttttc 134  Q
    ||||||| ||||||| ||||||||||    
T  7768577 atgttggcttctaaacccttgttttc 7768552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 1618882 - 1618934
Alignment:
Q  82 agagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttc 134  Q
    |||||||| ||||||||||||||||||| |||| ||||||||| ||||||||||    
T  1618882 agagaaatctctataaaccctagtttgt-tgtttgtttctaaacccttgttttc 1618934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 13419943 - 13419870
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaacctt 128  Q
    ||||| ||||||||||||||||| ||||||| ||  |||| ||||||||||||   |||||| || ||||||||    
T  13419943 caatcccaaccctagtgtttgttgccaagagcaaactctacaaaccctagttttcttgttggcttttaaacctt 13419870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 22712675 - 22712819
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||||||| ||||||||||||||||||||    
T  22712675 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagaaattctctataaaccctagtttgta 22712773  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| || |||||||| |||||| |||| |||||    
T  22712774 tgttggtttctaaaccctgtttttctacacactttatcatctgata 22712819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 12781380 - 12781523
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||| |    
T  12781380 agagactcaatcctaatagtgctttgtttaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgaa 12781478  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||||||||||||| |||||||||| |||||| |||| |||||    
T  12781479 tgttggtttctaaaccctgttttctacacactttatcatctgata 12781523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 38191020 - 38190877
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| | ||||||||||||||||||    
T  38191020 agagactcaatcttaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattatttataaaccctagtttgta 38190922  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| |||||||||| |||||| |||| |||||    
T  38190921 tgttggcttctaaaccctgttttctacacactttatcatctgata 38190877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 30479017 - 30478873
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  30479017 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 30478919  T
Q  111 tgttggtttctaaac-cttgttttctacgcactttttcatatgata 155  Q
    ||||||||||||||| ||  |||||||| |||||| |||| |||||    
T  30478918 tgttggtttctaaactctgtttttctacacactttatcatctgata 30478873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 17932657 - 17932523
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  17932657 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 17932559  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||||| |||||| || |||||||| |||||||    
T  17932558 tgttggtttataaaccctgtttttctacacactttt 17932523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 27517798 - 27517919
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| | |||||||||| ||||||||||||||||||||    
T  27517798 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgcaaagagaaattctctataaaccctagtttgta 27517896  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    |||||||||||||||| ||||||    
T  27517897 tgttggtttctaaaccctgtttt 27517919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 20050181 - 20050325
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaa-tttctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| | |||||||| ||||||||||||||||||||||    
T  20050181 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgcaaagagaaattttctataaaccctagtttgta 20050279  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||| ||| || |||||||| |||||| |||| |||||    
T  20050280 tgttggtttctataccctgtttttctacacactttatcatctgata 20050325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 12 - 155
Target Start/End: Complemental strand, 17943560 - 17943417
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||| |||||||||    
T  17943560 agagactcaatcctaatagtgatttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccatagtttgta 17943462  T
Q  111 tgttggtttctaaaccttgttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| | |||||||| ||| || |||| |||||    
T  17943461 tgttggcttctaaaccctattttctacacaccttatcatctgata 17943417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 22717384 - 22717518
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |  ||||| | |||||||||| ||| ||||||||||||||||    
T  22717384 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaacccta-tagttgttgctaagagaaattctctgtaaaccctagtttgta 22717482  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||||||||||||||| |||||||| |||||||    
T  22717483 tgttggtttctaaaccttgtttttctacacactttt 22717518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 33674564 - 33674698
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||| |||||| ||    
T  33674564 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccatagtttata 33674662  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    |||||||||||||||| || |||||||| |||||||    
T  33674663 tgttggtttctaaaccctgtttttctacacactttt 33674698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 20054924 - 20055068
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| | |||||||||| |||||||||| |||||||||    
T  20054924 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgcaaagagaaattctctataaaccttagtttgta 20055022  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||||||||| ||| || |||||||| |||||| |||| |||||    
T  20055023 tgttggtttctataccctgtttttctacacactttatcatctgata 20055068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 155
Target Start/End: Original strand, 37170911 - 37171055
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||||| ||||||| ||| ||||| |||||||||||| ||||||||||||||||||||    
T  37170911 agagactcaatcctaatagtgctttgttcaaggtgattcaaaacaatcccaaccctggtg-ttgttgccaagagaaattctctataaaccctagtttgta 37171009  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttttcatatgata 155  Q
    |||||| ||||||||| || |||||||| |||||| |||| |||||    
T  37171010 tgttggcttctaaaccctgtttttctacacactttatcatctgata 37171055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 34 - 155
Target Start/End: Original strand, 35894442 - 35894564
Alignment:
Q  34 tttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgtatgttggtttctaaaccttg-tt 131  Q
    |||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||| || ||    
T  35894442 tttgttcaaggtgaatcaaaacaatcccaaccctagtgtt-gttgccaagagaaattctctataaaccctagtttgtatgttggtttctaaaccctgttt 35894540  T
Q  132 ttctacgcactttttcatatgata 155  Q
    |||||| |||||| |||| |||||    
T  35894541 ttctacacactttatcatctgata 35894564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 17462459 - 17462327
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  17462459 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 17462361  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  17462360 tgttgg--tctaaaccttgtttttctacacactttt 17462327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 39687006 - 39686874
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  39687006 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 39686908  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  39686907 tgttgg--tctaaaccttgtttttctacacactttt 39686874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 45567432 - 45567300
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  45567432 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 45567334  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  45567333 tgttgg--tctaaaccttgtttttctacacactttt 45567300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 33604015 - 33603897
Alignment:
Q  14 agactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgt 113  Q
    |||||||||  ||| ||||||||||||||||||||||||||||||| |||||||| |||||||| |||| |||||| ||||||||||||||||||| |||    
T  33604015 agactcaattataatagtgttttgttcaaggtgaatcaaaacaatcccaaccctaatgtttgttgccaaaagaaatctctataaaccctagtttgt-tgt 33603917  T
Q  114 tggtttctaaaccttgtttt 133  Q
    | ||||||||||| ||||||    
T  33603916 ttgtttctaaaccatgtttt 33603897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 2736228 - 2736096
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  2736228 agagactcaatcctaatagtgttttgttcaatgtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 2736130  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  2736129 tgttgg--tctaaaccttgtttttctacacactttt 2736096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 2740964 - 2740832
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  2740964 agagactcaatcctaatagtgttttgttcaatgtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 2740866  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  2740865 tgttgg--tctaaaccttgtttttctacacactttt 2740832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 39680068 - 39679936
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||| ||| ||| |||||||||||||||||||     
T  39680068 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaaaagagattctctataaaccctagtttgtt 39679970  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||||  ||||||||| |||||||| |||||||    
T  39679969 tgttggtt--taaaccttgtttttctacacactttt 39679936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 31 - 133
Target Start/End: Original strand, 30261951 - 30262052
Alignment:
Q  31 tgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgt 130  Q
    |||||||||  ||||||||||||||||||||||||||||||||| || ||||||||||  |||||||||| |||||||| |||||| ||||||||| |||    
T  30261951 tgttttgtttcaggtgaatcaaaacaatctcaaccctagtgtttattgccaagagaaaactctataaaccgtagtttgt-tgttggcttctaaaccatgt 30262049  T
Q  131 ttt 133  Q
    |||    
T  30262050 ttt 30262052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 45158331 - 45158257
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagaga 86  Q
    |||||||  ||||||| |||||||||| |||| |||||||||||||||||||||||| |||||||| ||||||||    
T  45158331 agagactatatcctaacagtgttttgtgcaagatgaatcaaaacaatctcaaccctaatgtttgtttccaagaga 45158257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 20589786 - 20589727
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtg 71  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| ||||| |||||    
T  20589786 agagactcaatcctaacagtgttttgttcaaggtgaaccaaaacaatcacaaccatagtg 20589727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 28458988 - 28459035
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatc 59  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  28458988 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatc 28459035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 26345653 - 26345575
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgtttt 133  Q
    |||||||||||||| |||||||| ||||||||||| |||| ||| ||||||||   |||||| |||||| |||||||||    
T  26345653 caatctcaaccctaatgtttgttaccaagagaaatctctacaaatcctagttttgttgttggcttctaatccttgtttt 26345575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 55 - 134
Target Start/End: Complemental strand, 43139434 - 43139354
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttc 134  Q
    ||||||||||||||||||||||| ||||||| ||  |||| |||||| ||||| | |||||| ||||||| ||||||||||    
T  43139434 caatctcaaccctagtgtttgttgccaagagcaaactctacaaacccaagtttttgtgttggcttctaaacccttgttttc 43139354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 107
Target Start/End: Original strand, 30720820 - 30720872
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagttt 107  Q
    ||||||||||||||||||||| | ||||||||| | |||| ||||||||||||    
T  30720820 caatctcaaccctagtgtttggtgccaagagaattctctacaaaccctagttt 30720872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 27248111 - 27248193
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctag-tttgtatgttggtttctaaaccttgttttctac 137  Q
    |||||||| || ||||||||||| ||||||||| | |||| ||||| ||| ||||| |||||| |||||| |||||||||||||    
T  27248111 caatctcacccgtagtgtttgttgccaagagaattatctacaaaccttagctttgt-tgttggcttctaatccttgttttctac 27248193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 35028634 - 35028556
Alignment:
Q  55 caatctcaaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgtttt 133  Q
    ||||||||||||||||||||||| ||||||| ||  |||| |||||| | |||   |||||| ||||||||| ||||||    
T  35028634 caatctcaaccctagtgtttgttaccaagagcaaactctacaaacccaaattttattgttggattctaaaccctgtttt 35028556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 39287256 - 39287183
Alignment:
Q  65 cctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaa-ccttgttttctac 137  Q
    ||||||||||||| | ||||||| | |||| ||||||||||||   |||||| ||||||| |||||||||||||    
T  39287256 cctagtgtttgttgctaagagaattctctacaaaccctagttttcttgttggcttctaaacccttgttttctac 39287183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 10942726 - 10942798
Alignment:
Q  61 caaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgtttt 133  Q
    ||||||||||||||||| ||||||||| | |||| || ||||||| |   |||||| |||||| |||||||||    
T  10942726 caaccctagtgtttgttgccaagagaattctctacaatccctagtattattgttggcttctaatccttgtttt 10942798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 10948595 - 10948667
Alignment:
Q  61 caaccctagtgtttgttcccaagagaaatttctataaaccctagtttgtatgttggtttctaaaccttgtttt 133  Q
    ||||||||||||||||| ||||||||| | |||| || ||||||| |   |||||| |||||| |||||||||    
T  10948595 caaccctagtgtttgttgccaagagaattctctacaatccctagtattattgttggcttctaatccttgtttt 10948667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 16348 - 16214
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||| |    
T  16348 agagactcaatcctaatagtgctttgttcaaggtgaatcaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgaa 16250  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    |||||| ||||||||| || |||||||| |||||||    
T  16249 tgttggcttctaaaccctgtttttctacacactttt 16214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 12 - 133
Target Start/End: Original strand, 17145 - 17266
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| |||| |||||||||| |||| |||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  17145 agagactcaatcctaatagtgctttgttcaagatgaaacaaaacaatcccaaccctagtg-ttgttgccaagagaaattctctataaaccctagtttgta 17243  T
Q  111 tgttggtttctaaaccttgtttt 133  Q
    |||||||||||||||| ||||||    
T  17244 tgttggtttctaaaccctgtttt 17266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 31164 - 31032
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  31164 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 31066  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  31065 tgttgg--tctaaaccttgtttttctacacactttt 31032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 224842 - 224710
Alignment:
Q  12 agagactcaatcctaaaagtgttttgttcaaggtgaatcaaaacaatctcaaccctagtgtttgttcccaagagaaatt-tctataaaccctagtttgta 110  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| ||| |||||||||||||||||||     
T  224842 agagactcaatcctaatagtgttttgttcaaggtgaatcaaaacaatcccaaccctagag-ttgttgccaagagagattctctataaaccctagtttgtt 224744  T
Q  111 tgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    ||||||  ||||||||||| |||||||| |||||||    
T  224743 tgttgg--tctaaaccttgtttttctacacactttt 224710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1764 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1764
Description:

Target: scaffold1764; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 1391 - 1325
Alignment:
Q  81 aagagaaatt-tctataaaccctagtttgtatgttggtttctaaaccttg-ttttctacgcactttt 145  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  1391 aagagaaattctctataaaccctagtttgtatgttggtttctaaaccttgtttttctacacactttt 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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