View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11389_low_9 (Length: 474)

Name: NF11389_low_9
Description: NF11389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11389_low_9
NF11389_low_9
[»] chr8 (48 HSPs)
chr8 (9-461)||(29776804-29777252)
chr8 (1-212)||(33895911-33896123)
chr8 (1-230)||(11196703-11196930)
chr8 (1-226)||(44577853-44578077)
chr8 (1-225)||(44099977-44100200)
chr8 (1-235)||(9072523-9072759)
chr8 (1-235)||(19876023-19876252)
chr8 (9-216)||(35580282-35580490)
chr8 (1-193)||(34611652-34611845)
chr8 (9-212)||(11725511-11725714)
chr8 (1-229)||(9619400-9619630)
chr8 (7-213)||(42448076-42448284)
chr8 (7-219)||(9498648-9498863)
chr8 (1-229)||(14906966-14907196)
chr8 (1-175)||(4808830-4809005)
chr8 (9-222)||(43890175-43890390)
chr8 (1-175)||(2655735-2655911)
chr8 (1-226)||(32724524-32724759)
chr8 (1-209)||(11464004-11464212)
chr8 (24-203)||(17949085-17949265)
chr8 (1-209)||(28239665-28239874)
chr8 (1-123)||(43192389-43192510)
chr8 (6-225)||(33342255-33342473)
chr8 (7-157)||(37565928-37566079)
chr8 (1-214)||(15046719-15046935)
chr8 (11-209)||(15597220-15597419)
chr8 (10-225)||(16794110-16794324)
chr8 (9-217)||(27747164-27747372)
chr8 (11-111)||(33298787-33298886)
chr8 (11-149)||(39153195-39153336)
chr8 (88-175)||(12173369-12173455)
chr8 (88-175)||(12417797-12417883)
chr8 (50-162)||(24853530-24853643)
chr8 (8-135)||(36532805-36532931)
chr8 (1-203)||(18733858-18734061)
chr8 (36-120)||(17430944-17431030)
chr8 (6-105)||(37971199-37971297)
chr8 (65-120)||(17427325-17427380)
chr8 (6-60)||(7883316-7883370)
chr8 (65-162)||(12184168-12184262)
chr8 (65-162)||(12428596-12428690)
chr8 (6-60)||(23230603-23230657)
chr8 (78-164)||(18890861-18890949)
chr8 (1-56)||(8443584-8443639)
chr8 (6-69)||(20553316-20553379)
chr8 (8-60)||(3673401-3673453)
chr8 (77-157)||(26469351-26469430)
chr8 (1-29)||(29617347-29617375)
[»] chr1 (53 HSPs)
chr1 (9-236)||(51871667-51871893)
chr1 (1-209)||(51868688-51868897)
chr1 (1-236)||(7342524-7342760)
chr1 (6-226)||(50166147-50166367)
chr1 (1-219)||(9172307-9172528)
chr1 (1-219)||(9180289-9180510)
chr1 (1-212)||(25406327-25406539)
chr1 (1-218)||(14545340-14545557)
chr1 (1-162)||(28035016-28035177)
chr1 (1-213)||(40881055-40881271)
chr1 (1-219)||(35584661-35584883)
chr1 (8-225)||(5324608-5324825)
chr1 (1-229)||(5701066-5701297)
chr1 (12-229)||(27872552-27872765)
chr1 (36-230)||(40646496-40646692)
chr1 (1-200)||(11453773-11453973)
chr1 (12-225)||(18569364-18569576)
chr1 (8-225)||(33291468-33291687)
chr1 (11-200)||(30818399-30818588)
chr1 (1-225)||(45426109-45426331)
chr1 (16-207)||(38520592-38520784)
chr1 (1-196)||(19723176-19723371)
chr1 (11-165)||(20266176-20266330)
chr1 (1-229)||(19715938-19716168)
chr1 (1-175)||(50272183-50272358)
chr1 (1-164)||(7997662-7997827)
chr1 (17-228)||(45805875-45806081)
chr1 (1-118)||(34519054-34519170)
chr1 (1-125)||(9919303-9919427)
chr1 (9-175)||(30878938-30879106)
chr1 (1-162)||(3871285-3871446)
chr1 (24-209)||(50148201-50148389)
chr1 (65-228)||(25728066-25728227)
chr1 (9-223)||(44637235-44637451)
chr1 (1-229)||(41081747-41081980)
chr1 (11-226)||(7312153-7312370)
chr1 (8-100)||(31836745-31836838)
chr1 (1-116)||(9687247-9687375)
chr1 (1-231)||(39927597-39927827)
chr1 (1-125)||(39987304-39987427)
chr1 (38-117)||(30558736-30558813)
chr1 (7-164)||(51916739-51916898)
chr1 (65-138)||(18649989-18650062)
chr1 (182-229)||(31836675-31836722)
chr1 (10-77)||(48365817-48365883)
chr1 (182-226)||(9919238-9919282)
chr1 (6-60)||(5983797-5983851)
chr1 (9-60)||(7836876-7836927)
chr1 (10-60)||(7337744-7337794)
chr1 (6-60)||(11462525-11462579)
chr1 (10-60)||(45415519-45415569)
chr1 (147-225)||(48217443-48217520)
chr1 (94-163)||(48365887-48365956)
[»] chr6 (37 HSPs)
chr6 (1-236)||(16418957-16419192)
chr6 (1-236)||(23947361-23947596)
chr6 (1-225)||(12652749-12652978)
chr6 (1-229)||(25064040-25064270)
chr6 (1-225)||(10228493-10228713)
chr6 (1-225)||(8196450-8196675)
chr6 (1-216)||(17237328-17237543)
chr6 (1-229)||(8496770-8497001)
chr6 (1-176)||(33740621-33740797)
chr6 (1-218)||(12165657-12165874)
chr6 (1-229)||(8028161-8028390)
chr6 (1-229)||(4088264-4088494)
chr6 (8-203)||(4984617-4984823)
chr6 (9-219)||(7876095-7876300)
chr6 (42-219)||(33109649-33109826)
chr6 (1-219)||(7881145-7881358)
chr6 (1-230)||(17334581-17334812)
chr6 (1-119)||(35001506-35001624)
chr6 (1-229)||(4468372-4468592)
chr6 (9-221)||(34489061-34489276)
chr6 (1-176)||(33543663-33543839)
chr6 (8-106)||(25337499-25337597)
chr6 (12-163)||(28635175-28635327)
chr6 (61-150)||(25398451-25398540)
chr6 (12-58)||(7027811-7027857)
chr6 (14-140)||(4352052-4352183)
chr6 (94-134)||(3108468-3108508)
chr6 (71-117)||(13436705-13436751)
chr6 (166-219)||(8520878-8520931)
chr6 (87-125)||(8266545-8266583)
chr6 (6-60)||(23128577-23128631)
chr6 (6-60)||(32059868-32059922)
chr6 (6-60)||(32327294-32327348)
chr6 (6-60)||(33053245-33053299)
chr6 (11-60)||(34018519-34018568)
chr6 (65-125)||(5582759-5582819)
chr6 (1-29)||(14801810-14801838)
[»] chr5 (57 HSPs)
chr5 (1-236)||(19280988-19281223)
chr5 (6-219)||(7246776-7246990)
chr5 (6-219)||(7241600-7241814)
chr5 (1-222)||(27266902-27267125)
chr5 (1-208)||(7150378-7150586)
chr5 (11-211)||(18677518-18677720)
chr5 (1-229)||(30371532-30371762)
chr5 (12-234)||(7886992-7887214)
chr5 (1-225)||(36344534-36344757)
chr5 (1-229)||(34881518-34881754)
chr5 (9-234)||(26578053-26578280)
chr5 (8-234)||(43261869-43262094)
chr5 (7-189)||(16981138-16981320)
chr5 (8-229)||(19259861-19260080)
chr5 (7-218)||(21060331-21060542)
chr5 (1-163)||(781264-781425)
chr5 (8-161)||(43148607-43148760)
chr5 (1-195)||(28235427-28235621)
chr5 (1-147)||(2057881-2058027)
chr5 (1-214)||(3271445-3271663)
chr5 (9-229)||(42579685-42579916)
chr5 (1-116)||(30298130-30298244)
chr5 (1-225)||(41184483-41184712)
chr5 (4-235)||(27751716-27751959)
chr5 (1-164)||(35475380-35475542)
chr5 (12-198)||(11767645-11767834)
chr5 (9-212)||(20257745-20257948)
chr5 (57-173)||(10649317-10649434)
chr5 (1-125)||(42886392-42886514)
chr5 (8-143)||(15570804-15570939)
chr5 (9-125)||(27576401-27576516)
chr5 (10-116)||(7613110-7613214)
chr5 (12-225)||(11192178-11192392)
chr5 (50-125)||(42432813-42432887)
chr5 (15-113)||(1696923-1697021)
chr5 (6-107)||(14082450-14082556)
chr5 (1-63)||(10649621-10649680)
chr5 (130-212)||(4953905-4953990)
chr5 (50-164)||(6445810-6445923)
chr5 (1-117)||(19983398-19983516)
chr5 (1-163)||(14211076-14211236)
chr5 (50-165)||(28097026-28097140)
chr5 (6-60)||(6012215-6012269)
chr5 (38-117)||(19100721-19100800)
chr5 (1-117)||(1582166-1582280)
chr5 (1-117)||(1602535-1602649)
chr5 (62-164)||(2979454-2979558)
chr5 (8-101)||(13421850-13421942)
chr5 (11-60)||(24229866-24229915)
chr5 (35-138)||(3166259-3166363)
chr5 (77-164)||(7036070-7036160)
chr5 (9-60)||(14726541-14726592)
chr5 (6-60)||(9113802-9113856)
chr5 (6-60)||(13007186-13007240)
chr5 (106-203)||(35676224-35676321)
chr5 (6-60)||(38597754-38597808)
chr5 (70-106)||(10148730-10148766)
[»] chr2 (59 HSPs)
chr2 (1-229)||(45128014-45128242)
chr2 (17-202)||(32680640-32680826)
chr2 (1-229)||(34598796-34599025)
chr2 (1-229)||(2808515-2808742)
chr2 (1-225)||(6173445-6173670)
chr2 (1-224)||(20047125-20047348)
chr2 (1-230)||(36233813-36234046)
chr2 (11-225)||(21570460-21570676)
chr2 (1-222)||(9986385-9986612)
chr2 (1-229)||(30420486-30420716)
chr2 (1-229)||(3270272-3270500)
chr2 (1-206)||(8971670-8971877)
chr2 (1-227)||(27249194-27249421)
chr2 (8-214)||(40626078-40626284)
chr2 (1-212)||(40659975-40660183)
chr2 (1-164)||(32913117-32913279)
chr2 (14-225)||(41712821-41713033)
chr2 (1-175)||(7015754-7015928)
chr2 (1-206)||(3725013-3725218)
chr2 (9-235)||(25086839-25087067)
chr2 (1-138)||(41430929-41431066)
chr2 (1-160)||(4228011-4228171)
chr2 (1-236)||(26025453-26025689)
chr2 (11-161)||(4192717-4192866)
chr2 (12-228)||(459328-459545)
chr2 (8-116)||(22421659-22421766)
chr2 (1-235)||(27476958-27477186)
chr2 (1-225)||(17319139-17319360)
chr2 (9-117)||(8805789-8805896)
chr2 (1-189)||(27949272-27949464)
chr2 (9-150)||(39641909-39642051)
chr2 (46-229)||(31581808-31581974)
chr2 (1-97)||(3269154-3269251)
chr2 (1-97)||(3269713-3269810)
chr2 (58-176)||(42949576-42949696)
chr2 (7-150)||(32197844-32197986)
chr2 (6-165)||(30923520-30923679)
chr2 (99-229)||(33229129-33229260)
chr2 (1-55)||(31580632-31580686)
chr2 (9-176)||(9374607-9374768)
chr2 (73-164)||(18694922-18695014)
chr2 (1-117)||(8308097-8308209)
chr2 (6-60)||(18763436-18763490)
chr2 (10-60)||(39310934-39310984)
chr2 (1-57)||(12647996-12648052)
chr2 (14-110)||(10248077-10248171)
chr2 (70-135)||(38293450-38293514)
chr2 (10-105)||(10237305-10237398)
chr2 (77-117)||(23933778-23933818)
chr2 (50-117)||(36323781-36323847)
chr2 (6-69)||(36943199-36943262)
chr2 (10-60)||(1421644-1421694)
chr2 (6-60)||(7677951-7678005)
chr2 (65-135)||(9418326-9418395)
chr2 (62-107)||(3308851-3308896)
chr2 (70-119)||(10548141-10548190)
chr2 (41-137)||(23903294-23903391)
chr2 (7-60)||(37876685-37876738)
chr2 (6-58)||(7646443-7646495)
[»] chr7 (56 HSPs)
chr7 (1-225)||(22927913-22928138)
chr7 (1-224)||(1485300-1485521)
chr7 (7-229)||(23085327-23085549)
chr7 (1-229)||(26583519-26583748)
chr7 (1-229)||(42311085-42311314)
chr7 (1-208)||(35496218-35496426)
chr7 (1-211)||(433734-433944)
chr7 (9-231)||(20116386-20116608)
chr7 (1-227)||(26492172-26492399)
chr7 (1-230)||(46821818-46822049)
chr7 (1-226)||(1448873-1449098)
chr7 (6-236)||(35667280-35667509)
chr7 (17-229)||(2843288-2843499)
chr7 (1-218)||(48207720-48207935)
chr7 (1-164)||(23425415-23425577)
chr7 (9-229)||(21266197-21266416)
chr7 (1-160)||(42408237-42408396)
chr7 (1-204)||(45199075-45199278)
chr7 (1-175)||(46338912-46339088)
chr7 (1-163)||(42067104-42067265)
chr7 (1-216)||(14627922-14628139)
chr7 (1-209)||(31235835-31236044)
chr7 (51-229)||(32684488-32684671)
chr7 (1-198)||(6001856-6002055)
chr7 (1-225)||(32521970-32522198)
chr7 (6-96)||(17223047-17223136)
chr7 (12-94)||(6558817-6558900)
chr7 (130-229)||(12539127-12539227)
chr7 (1-104)||(23786508-23786609)
chr7 (25-178)||(36143722-36143875)
chr7 (9-217)||(17499710-17499906)
chr7 (9-217)||(17553308-17553504)
chr7 (25-226)||(20083139-20083343)
chr7 (15-158)||(35261174-35261319)
chr7 (1-104)||(7640815-7640928)
chr7 (38-125)||(3860862-3860947)
chr7 (1-92)||(34773653-34773745)
chr7 (8-164)||(17611002-17611152)
chr7 (50-117)||(5546277-5546344)
chr7 (6-60)||(37837535-37837589)
chr7 (35-136)||(1575153-1575254)
chr7 (47-162)||(1100856-1100969)
chr7 (9-105)||(24770161-24770257)
chr7 (7-105)||(1749232-1749328)
chr7 (6-60)||(8001623-8001677)
chr7 (6-60)||(9450214-9450268)
chr7 (53-126)||(1097698-1097771)
chr7 (39-116)||(7740559-7740635)
chr7 (1-164)||(35132796-35132959)
chr7 (6-60)||(19296830-19296884)
chr7 (6-60)||(30756896-30756950)
chr7 (6-60)||(34899684-34899738)
chr7 (10-60)||(39171671-39171721)
chr7 (6-60)||(42978570-42978624)
chr7 (7-60)||(12141386-12141439)
chr7 (11-63)||(3394428-3394480)
[»] chr4 (71 HSPs)
chr4 (1-236)||(10389797-10390032)
chr4 (1-225)||(56194417-56194647)
chr4 (1-236)||(6972620-6972856)
chr4 (1-229)||(9528920-9529150)
chr4 (1-224)||(9645592-9645816)
chr4 (1-226)||(25273695-25273929)
chr4 (1-227)||(1531725-1531954)
chr4 (1-221)||(43444218-43444439)
chr4 (1-225)||(867978-868208)
chr4 (1-219)||(4643683-4643904)
chr4 (1-198)||(38706753-38706951)
chr4 (1-229)||(9283728-9283957)
chr4 (1-229)||(31381715-31381943)
chr4 (1-212)||(37188637-37188847)
chr4 (8-229)||(10359597-10359819)
chr4 (7-197)||(51317834-51318025)
chr4 (1-218)||(53616693-53616912)
chr4 (12-228)||(34024491-34024707)
chr4 (12-203)||(21089995-21090187)
chr4 (19-229)||(50766570-50766783)
chr4 (9-229)||(2115638-2115859)
chr4 (8-229)||(20569069-20569294)
chr4 (6-225)||(2624318-2624537)
chr4 (1-229)||(43154057-43154292)
chr4 (1-125)||(8009404-8009526)
chr4 (87-236)||(5333660-5333807)
chr4 (1-198)||(35261036-35261237)
chr4 (1-219)||(44947230-44947458)
chr4 (1-196)||(35965018-35965214)
chr4 (1-116)||(29965565-29965681)
chr4 (9-120)||(14183730-14183841)
chr4 (1-198)||(12265302-12265500)
chr4 (1-225)||(18138956-18139180)
chr4 (50-228)||(47416703-47416881)
chr4 (1-225)||(49126169-49126393)
chr4 (11-125)||(49680459-49680577)
chr4 (8-125)||(32952798-32952913)
chr4 (1-115)||(46991173-46991287)
chr4 (12-217)||(1931770-1931963)
chr4 (72-212)||(27593952-27594091)
chr4 (154-228)||(29965493-29965568)
chr4 (8-106)||(3336207-3336304)
chr4 (87-157)||(5333588-5333658)
chr4 (122-219)||(50179598-50179696)
chr4 (52-143)||(1008199-1008289)
chr4 (47-143)||(35351250-35351345)
chr4 (1-52)||(47417657-47417708)
chr4 (50-220)||(21554901-21555075)
chr4 (74-123)||(21405437-21405486)
chr4 (11-135)||(43353611-43353735)
chr4 (111-188)||(3338816-3338894)
chr4 (6-60)||(32766492-32766546)
chr4 (1-60)||(28857377-28857436)
chr4 (7-54)||(29961002-29961049)
chr4 (8-43)||(45228091-45228126)
chr4 (74-117)||(49072873-49072916)
chr4 (6-60)||(4142832-4142886)
chr4 (10-60)||(11300072-11300122)
chr4 (6-60)||(22611161-22611215)
chr4 (9-63)||(27593878-27593932)
chr4 (6-60)||(35348285-35348339)
chr4 (6-60)||(53811006-53811060)
chr4 (6-60)||(56040723-56040777)
chr4 (6-60)||(56156719-56156773)
chr4 (6-60)||(2520755-2520811)
chr4 (41-137)||(21365178-21365275)
chr4 (7-60)||(26633749-26633802)
chr4 (1-38)||(49410232-49410269)
chr4 (65-117)||(26123193-26123245)
chr4 (20-60)||(47158205-47158245)
chr4 (31-161)||(52097992-52098123)
[»] chr3 (59 HSPs)
chr3 (8-229)||(4172369-4172591)
chr3 (1-229)||(4178367-4178596)
chr3 (8-236)||(46934438-46934666)
chr3 (1-226)||(25162242-25162467)
chr3 (1-226)||(36905927-36906153)
chr3 (1-203)||(25631569-25631773)
chr3 (1-218)||(29503275-29503493)
chr3 (1-228)||(32607271-32607500)
chr3 (12-225)||(39917451-39917664)
chr3 (9-229)||(44907449-44907670)
chr3 (1-165)||(17237670-17237836)
chr3 (1-229)||(38855079-38855308)
chr3 (1-228)||(51202297-51202520)
chr3 (14-229)||(38440634-38440844)
chr3 (1-203)||(49552267-49552469)
chr3 (59-236)||(3850556-3850731)
chr3 (1-229)||(2342295-2342523)
chr3 (1-227)||(12115898-12116129)
chr3 (6-229)||(50611465-50611689)
chr3 (1-225)||(35499241-35499470)
chr3 (1-147)||(42719406-42719548)
chr3 (1-167)||(22802887-22803053)
chr3 (8-99)||(30648769-30648860)
chr3 (1-163)||(14464377-14464541)
chr3 (10-162)||(46178447-46178599)
chr3 (136-229)||(30648917-30649010)
chr3 (6-209)||(47980711-47980919)
chr3 (6-209)||(47989998-47990206)
chr3 (6-209)||(47999285-47999493)
chr3 (6-209)||(48008572-48008780)
chr3 (71-151)||(21487993-21488073)
chr3 (1-203)||(37169062-37169262)
chr3 (1-58)||(3848962-3849019)
chr3 (71-229)||(25849624-25849782)
chr3 (1-192)||(31793920-31794102)
chr3 (87-194)||(36735281-36735389)
chr3 (11-115)||(30829892-30829995)
chr3 (9-135)||(54378798-54378923)
chr3 (1-68)||(36734735-36734802)
chr3 (6-60)||(20465047-20465101)
chr3 (6-60)||(43488667-43488721)
chr3 (9-57)||(6910754-6910802)
chr3 (1-45)||(21488078-21488122)
chr3 (1-57)||(29239300-29239356)
chr3 (6-105)||(51923634-51923731)
chr3 (6-60)||(9998424-9998478)
chr3 (6-60)||(10108193-10108247)
chr3 (6-60)||(10233027-10233081)
chr3 (6-60)||(12050725-12050779)
chr3 (7-105)||(20608977-20609074)
chr3 (6-60)||(36461508-36461562)
chr3 (6-60)||(38860197-38860251)
chr3 (6-60)||(40487282-40487336)
chr3 (182-227)||(26970331-26970376)
chr3 (7-60)||(31271885-31271938)
chr3 (1-29)||(8914693-8914721)
chr3 (65-105)||(33579772-33579812)
chr3 (6-58)||(40556671-40556723)
chr3 (89-157)||(53706416-53706484)
[»] scaffold0495 (1 HSPs)
scaffold0495 (1-225)||(5212-5432)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-165)||(16363-16529)
[»] scaffold0311 (1 HSPs)
scaffold0311 (23-198)||(8556-8731)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-229)||(361842-362066)
[»] scaffold0426 (2 HSPs)
scaffold0426 (78-229)||(6144-6295)
scaffold0426 (7-47)||(6293-6333)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-120)||(201415-201533)
[»] scaffold0264 (1 HSPs)
scaffold0264 (9-189)||(20447-20624)
[»] scaffold0608 (1 HSPs)
scaffold0608 (122-219)||(57-155)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-68)||(83500-83545)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-117)||(453851-453966)
[»] scaffold0127 (1 HSPs)
scaffold0127 (6-60)||(15449-15503)
[»] scaffold0017 (1 HSPs)
scaffold0017 (6-60)||(32824-32878)
[»] scaffold0888 (1 HSPs)
scaffold0888 (1-105)||(1757-1859)
[»] scaffold0372 (1 HSPs)
scaffold0372 (41-137)||(9702-9799)


Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 9 - 461
Target Start/End: Complemental strand, 29777252 - 29776804
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||          | |||||||||||||||||||    
T  29777252 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatct----------cgcttatttagattgaaatag 29777163  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagagagaaaattag 207  Q
    |||||||||||| |||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||| ||||||||||||||||||||||||||||||    
T  29777162 agagaaaaagatgaagaggagtgatttcatgtcaataattgacccaaaaccactcaccaatgaagaaacaggatgagaaaacctagagagagaaaattag 29777063  T
Q  208 ggccgacttgttggagagggaggggaagattnnnnnnnnnnnnnnnnttcaatttcatgcgttgtcaaagaaattgaatgcattcaagatttttctaata 307  Q
    ||||||||||||||||||||||||||||| |                 ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29777062 ggccgacttgttggagagggaggggaagagtaaaaaaaaaaaa-----tcaatttcatgagttgtcaaagaaattgaatgcattcaagatttttctaata 29776968  T
Q  308 ttcggagaatgtaaatttcaattttcatggtcaatggtcaaatacac-----------aattaataaatacagatatgagataactcaccaataaccaat 396  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||    
T  29776967 ttcggagaatgtaaatttcaa-tttcatggtcaatggtcaaatacacaattaaggcataattaataaatacagatatgagataactcaccaataaccaat 29776869  T
Q  397 tctcaaccgttagagaaggactgactatatattttgaaaactcctacatgcatttagctccattc 461  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29776868 tctcaaccgttagagaaggactgacaatatattttgaaaactcctacatgcatttagctccattc 29776804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 33896123 - 33895911
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  33896123 aacaacgccgcacaagaagacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaagtcacttatttaga 33896024  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    || |||||||||||||||||| |||| |  ||| || || ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||    
T  33896023 tttaaatagagagaaaaagatgaagaggggtgactttagatcaagaattgacccaaaaccacccccaatgaagaaacgcgaagagaaaacctagagagag 33895924  T
Q  200 aaaattagggccg 212  Q
    |||||||||||||    
T  33895923 aaaattagggccg 33895911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 11196930 - 11196703
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  11196930 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaagaa-aaaacctagatctatgtgaaaatcacttatttagat 11196832  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||  |||||||||||| |||||| |||||||||||||||||||||||| ||||||||||| ||| ||||||||  || ||||||| ||||||||||    
T  11196831 tgaaat--agagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaaccacccctcaacgaagaaactagaagagaaaaactagagagag 11196734  T
Q  200 aaaattagggccgacttgttggagagggagg 230  Q
    |||| |||||||  |||||||||||||||||    
T  11196733 aaaactagggccagcttgttggagagggagg 11196703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 44578077 - 44577853
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| || ||||||| ||||||    
T  44578077 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaattacaaagaaaaaaacctagatctatgtgtaaatcacttagttagat 44577978  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||| || |||||| ||||||| |||||||| ||||||||||| |||||||||||| | | ||||||||||  ||||||    
T  44577977 tgaaatagagagaaaaagatgaagaggagtgattttaggtcaaaaattgacccaaaaccacccctcaatgaagaaacagtaagagaaaacct--agagag 44577880  T
Q  200 aaaattagggccgacttgttggagagg 226  Q
    |||| ||||||||  ||||||||||||    
T  44577879 aaaactagggccgtattgttggagagg 44577853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 44099977 - 44100200
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||| | ||||||||||||    
T  44099977 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgat-aaatcacaaagaa-aaaacttagatctatgtgaaaataacttatttagat 44100074  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||||||| |||| |  |||||| ||||||||||| |||| ||||||||||| |||||||||||| | | ||||||||||||||||||    
T  44100075 tgaaatatagagaaaaagatgaagaggggtgattttaggtcaagaatcgacccaaaaccacccctcaatgaagaaaccgaaagagaaaacctagagagag 44100174  T
Q  200 aaaattagggccgacttgttggagag 225  Q
    |||| |||||||| ||||||||||||    
T  44100175 aaaactagggccggcttgttggagag 44100200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 9072759 - 9072523
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||||||||||||||| |    
T  9072759 aacaacgccgcacaagatgaagaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaatctagatttatgtgaaagtcacttatttaaa 9072660  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac-ccccaatgaagaaacgggatgagaaaacctagagaga 198  Q
    ||||||||||||||||||||| |||| |  |||||||| ||||| |||||||| |||||||| |||||||||||||||| |||||||||| |||||||||    
T  9072659 ttgaaatagagagaaaaagatgaagaggggtgatttcaagtcaaaaattgacccaaaaccaccccccaatgaagaaacgagatgagaaaatctagagaga 9072560  T
Q  199 gaaaattagggccgacttgttggagagggaggggaag 235  Q
    ||||||||||| ||  ||| |||| |||||| |||||    
T  9072559 gaaaattagggtcggtttgctggaaagggagaggaag 9072523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 19876252 - 19876023
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||    
T  19876252 aacaacgccgcacaagacgacgaacaacaaaccactacacttagatgatgaaatcacaaagaa-aaaaccttgatctatgtgaaaatcacttatttagat 19876154  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||  ||||||||||| ||||||| | ||||||||||||||||||||| ||||||||||| ||||  | || |   | ||||||||||  ||||||    
T  19876153 tgaaatattgagaaaaagatgaagatgagtaatttcaggtcaagaattgacccaaaaccacccctcaatagaaaatc---aagagaaaacct--agagag 19876059  T
Q  200 aaaattagggccgacttgttggagagggaggggaag 235  Q
    ||||||||||||| ||||||||||||||||||||||    
T  19876058 aaaattagggccggcttgttggagagggaggggaag 19876023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 9 - 216
Target Start/End: Complemental strand, 35580490 - 35580282
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  35580490 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacgaagaa-aaaacctagatctatgtgaaaatcacttatttaaattgaaatag 35580392  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc--cccaatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
    |||||||||||| ||||||| |||||| | ||||| |||||||| |||||||||  | |||||||||||  ||| || |||||||| ||||| |||||||    
T  35580391 agagaaaaagatgaagatgagtgattttatgtcaaaaattgacccaaaaccaccctctcaatgaagaaattggaagaaaaaacctaaagagaaaaaatta 35580292  T
Q  207 gggccgactt 216  Q
    ||||||||||    
T  35580291 gggccgactt 35580282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 34611845 - 34611652
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||     
T  34611845 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatttatgtgaaaatcacttatttagac 34611746  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctag 193  Q
    ||||||||| ||||||| || ||||||| ||||||||||||||||||||||| ||||||||||| | |||||||||| | | ||||||| ||||    
T  34611745 tgaaatagaaagaaaaatatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcgatgaagaaactgtaagagaaaaactag 34611652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 9 - 212
Target Start/End: Complemental strand, 11725714 - 11725511
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||||     
T  11725714 cgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcaaaaagaa-aaaacctagatctatgtgaaaaacacttatttagattgaaataa 11725616  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattag 207  Q
    |||||||||||  |||| |  ||||||||||||||||||||||| ||||||||||| |||||||||||| | | ||||||| |||||||||||||| |||    
T  11725615 agagaaaaagacgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgaaagagaaaatctagagagagaaaactag 11725516  T
Q  208 ggccg 212  Q
    |||||    
T  11725515 ggccg 11725511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9619400 - 9619630
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||| |||||||| ||||||||||||| |||| ||| ||||  ||| |||||||||||| |||||||||||||    
T  9619400 aacaacgccgcacaagacgacgaacaacaaatcaccacacgtagatgatgaaattacaatgaaaaaaaatctaaatctatgtgaaaatcacttatttaga 9619499  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| |||||||||||| |||| |  ||||||||||||||||||||||| ||||||||||| |||||||||||  | | ||||||| |||||||||    
T  9619500 ttgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagagaaaatctagagaga 9619599  T
Q  199 gaaaattagggccgacttgttggagagggag 229  Q
    ||||| ||| |||| ||||||||||||||||    
T  9619600 gaaaactagagccggcttgttggagagggag 9619630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 42448076 - 42448284
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaag-aaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||| || || |||||||||||||||||||    
T  42448076 gccgcacaagacgacgaacaacaaacctccacacttagatgatgaaatcacaaagaaacaaaacctagatctatatgtaaatcacttatttagattgaaa 42448175  T
Q  106 tagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaat 204  Q
    ||||||||||||||| |||| |  ||||||||||||||||||| ||| ||||||||||| ||||||  |||| | | || |||||||||||||||||||     
T  42448176 tagagagaaaaagatgaagaggggtgatttcaggtcaagaattaacccaaaaccacccctcaatgacaaaactgtaagacaaaacctagagagagaaaac 42448275  T
Q  205 tagggccga 213  Q
    |||||||||    
T  42448276 tagggccga 42448284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 9498648 - 9498863
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag---aagaaaacctagatctatgtgaaagtcacttatttagattga 103  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||| ||||||   || |||||||| |||||||||||| |||||||||||||||||    
T  9498648 gccgcacaagacaacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaaaacctaaatctatgtgaaaatcacttatttagattga 9498747  T
Q  104 aatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaa 202  Q
    |||| ||| |||||||| |||| |  ||||||||||| ||||||||||| ||||||||||| |||||||||||  | | |||||||||||||||||||||    
T  9498748 aataaagataaaaagatgaagaggggtgatttcaggt-aagaattgacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaa 9498846  T
Q  203 attagggccgacttgtt 219  Q
    | |||||||||||||||    
T  9498847 actagggccgacttgtt 9498863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 14906966 - 14907196
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaa-aacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||| ||||||||| ||||||| || ||||||||||| |||||||| || ||||||||||||||||||| |||||||||||||    
T  14906966 aacaacgccgcacaagacgacaaacaacaaatcaccacattttgatgatgaaattacaaagaaaaagaacctagatctatgtgaaaatcacttatttaga 14907065  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| |||||||||||| ||||||  ||||||||||||||||||||| | |||| || ||| |||||||||||  | | |||||||||||||||||    
T  14907066 ttgaaataaagagaaaaagatgaagatgggtgatttcaggtcaagaattgatccaaaatcatccctcaatgaagaaattgtaagagaaaacctagagaga 14907165  T
Q  199 gaaaattagggccgacttgttggagagggag 229  Q
    ||||| ||||| || ||| || |||||||||    
T  14907166 gaaaactagggtcggcttattagagagggag 14907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 4809005 - 4808830
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||| ||    
T  4809005 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaagctagatctatgtgaaaatcacttatttacat 4808906  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaa 175  Q
    ||||||| ||| |||||||| |||| |  | ||||||||||||||||||||| ||||||||||| |||||||||||    
T  4808905 tgaaataaagaaaaaaagatgaagaggggtaatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaa 4808830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 43890175 - 43890390
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||| ||||  |||||||||||| ||| |||||||||||||||||| ||    
T  43890175 cgcacaagacgacgaacaacaaatcaccatacttagatgatgaaattacaaagaaaaaaaatctagatctatgtcaaaatcacttatttagattgaatta 43890274  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
     |||||||||||| |||| |  |||||||||||||| || ||| | ||||||||||| |||||||||||  | | |||||||||||||||||||||| ||    
T  43890275 aagagaaaaagatgaagaggggtgatttcaggtcaaaaaatgatccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaaacta 43890374  T
Q  207 gggccgacttgttgga 222  Q
    |||||||||| |||||    
T  43890375 gggccgacttattgga 43890390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 2655911 - 2655735
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttaga 99  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||  |||||||||||||||| |||||||||||||    
T  2655911 aacaacgctgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttatttaga 2655812  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaa 175  Q
    |||||||| |||||||||||| ||||||  ||||| ||||||||||||||||| ||||||||| | |||||||||||    
T  2655811 ttgaaataaagagaaaaagatgaagatgggtgattgcaggtcaagaattgacccaaaaccaccgctcaatgaagaaa 2655735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 32724524 - 32724759
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaa--------acctagatctatgtgaaagtcactt 92  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||        | |||||||||||||||| ||||||    
T  32724524 aacaacgccgcacaagacgacgaacaacaaaccaccacagttagatgatgaaatcataaagaaaaaacaaaaaaaatctagatctatgtgaaaatcactt 32724623  T
Q  93 atttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaa-ttgacctaaaaccacccc--caatgaagaaacgggatgagaaaac 189  Q
    |||||||||||||||||||| ||||||| ||||  | |||||||||||||| || |||||| |||||||||||  ||||| |||||| | | ||||||||    
T  32724624 atttagattgaaatagagag-aaaagatgaagagaagtgatttcaggtcaataatttgacccaaaaccaccccctcaatggagaaactgtaagagaaaac 32724722  T
Q  190 ctagagagagaaaattagggccgacttgttggagagg 226  Q
    | |||||||||||| ||||| ||||||||||||||||    
T  32724723 ccagagagagaaaactagggtcgacttgttggagagg 32724759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 11464212 - 11464004
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||| || |||| |||||||||||||||| ||||||||| | |    
T  11464212 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttattcaaa 11464113  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| |||||| |  || |||| |  |||||||||||||||||||||||||||||||||||  ||||||||||  | | ||||||||  | |||||    
T  11464112 ttgaaataaagagaaga--atgaagaggggtgatttcaggtcaagaattgacctaaaaccaccccttaatgaagaaattgtaagagaaaactcaaagaga 11464015  T
Q  199 gaaaattaggg 209  Q
    |||||||||||    
T  11464014 gaaaattaggg 11464004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 24 - 203
Target Start/End: Complemental strand, 17949265 - 17949085
Alignment:
Q  24 acaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaa 123  Q
    ||||||||||| ||||||||||||||||||||||||| || |||| | |||||||||||||| || ||||||||||||||||||||||||||||| | ||    
T  17949265 acaacaaaccatcacacttagatgatgaaatcacaaataaaaaaatcaagatctatgtgaaaatcgcttatttagattgaaatagagagaaaaaggtgaa 17949166  T
Q  124 gatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagagagaaaa 203  Q
    || |  |||||||||||||| |||||||| |||| |||||  |||||||||||| | | |||| |||||||||||||||||    
T  17949165 gaggggtgatttcaggtcaataattgacccaaaatcacccatcaatgaagaaactgtaagagacaacctagagagagaaaa 17949085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 28239874 - 28239665
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtg-aaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||||| ||||||| | |||| |||||| |  || |||||||||||||||||||| |||  ||||||||||||    
T  28239874 aacaacgccgcacaagacgacgaacaacaaaccgccacactcaaatgacgaaatcgcgtag-agaaaacctagatctatgtgaaaaaacacttatttaga 28239776  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||||||||||||||||| ||||    |||||||||||||| |||||||| |||| ||||||  |||||||||||  ||| ||||||||||||||||    
T  28239775 ttgaaatagagagaaaaagatgaagagaggtgatttcaggtcaaaaattgacccaaaatcaccccctcaatgaagaaaatggaagagaaaacctagagag 28239676  T
Q  198 agaaaattaggg 209  Q
    | ||||||||||    
T  28239675 a-aaaattaggg 28239665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 43192389 - 43192510
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||  |||||||||||||    
T  43192389 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacgaagaa-aaaacctagatctatgtaaaaaccacttatttagat 43192487  T
Q  101 tgaaatagagagaaaaagataaa 123  Q
    |||||||||||||||| ||||||    
T  43192488 tgaaatagagagaaaatgataaa 43192510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 6 - 225
Target Start/End: Complemental strand, 33342473 - 33342255
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttagattgaa 104  Q
    ||||||| ||||||| |||||||| |||||||||||| | ||| |||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||    
T  33342473 cgccgcataagacgaagaacaacacaccaccacacttgggtgacgaaatcacgaagaa-aaaacctagatctatgtgaaaaatcacttatttagattgaa 33342375  T
Q  105 atagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaa 203  Q
     |||||| |||| ||| |||| |  ||||||||||| || |||||||| ||||||||||| ||||||||||||  || || |||||||  ||||||||||    
T  33342374 ttagagaaaaaaggatgaagaggggtgatttcaggttaaaaattgacccaaaaccacccctcaatgaagaaactcgaagaaaaaacct--agagagaaaa 33342277  T
Q  204 ttagggccgacttgttggagag 225  Q
     |||||||| |||||| |||||    
T  33342276 ctagggccggcttgttagagag 33342255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 7 - 157
Target Start/End: Original strand, 37565928 - 37566079
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||| ||| ||||||||||||||||    
T  37565928 gccgcacaagacgacgaataacaaaccaccacacttagatgatgaaatctcaaagaaaaaaacctaaatctatgtgaaaatcaattatttagattgaaat 37566027  T
Q  107 agaga-gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaa 157  Q
    |||||  ||||| || |||| |  ||||||||| |||| |||||||| ||||    
T  37566028 agagataaaaaaaatgaagaagggtgatttcagatcaataattgacccaaaa 37566079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15046935 - 15046719
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||| |||||||||||||||||||||| |||||||||||  ||||| |||||||| ||||| ||||||||||||||||||||| ||||||| ||  ||    
T  15046935 aacagcaccgcacaagacgacgaacaacacaccaccacactcggatgacgaaatcacgaagaaaaaaacctagatctatgtgaaaatcacttacttgaat 15046836  T
Q  101 tgaaataga-gagaaaaagataaagatgaatgatttcaggtcaagaattga-cctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    |||||| ||  |||||||||| ||||    ||||||||  |||| |||||| || |||| |||||| ||||||||||||  || ||||||| ||| ||||    
T  15046835 tgaaatggactagaaaaagatgaagagaggtgatttcatatcaaaaattgaccccaaaatcacccctcaatgaagaaacttgaagagaaaatctaaagag 15046736  T
Q  198 agaaaattagggccgac 214  Q
    | |||| ||||||||||    
T  15046735 aaaaaaatagggccgac 15046719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 11 - 209
Target Start/End: Original strand, 15597220 - 15597419
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaataga- 109  Q
    ||||||||||| ||||||| ||||| |||||  ||||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||||||||| ||     
T  15597220 cacaagacgacaaacaacacaccactacactcggatgacgaaatcatgaagaa-aaaacctagatctatgtgaaaatcacttatttagattgaaatggac 15597318  T
Q  110 gagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagg 208  Q
     |||||||||| |||| |  |||||||||||||| |||||||  ||||||||||| |||| || | || ||| ||||||||||| ||||| |||| ||||    
T  15597319 tagaaaaagatgaagaggggtgatttcaggtcaaaaattgactgaaaaccacccctcaataaaaatactggaagagaaaacctatagagaaaaaactagg 15597418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 225
Target Start/End: Complemental strand, 16794324 - 16794110
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttagattgaaatag 108  Q
    |||||||||||||||||||| | |||||| ||  |||||||||||||| |||||  |||||||||| |||||||||  |||||||||||||||||| |||    
T  16794324 gcacaagacgacgaacaacataacaccactctcggatgatgaaatcacgaagaa--aaacctagatttatgtgaaaaatcacttatttagattgaattag 16794227  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagagaaaattagg 208  Q
    |||||||||||| ||||||  |||||||| ||||| ||||||   |||||||||  |||| ||||||| | |  |||||| ||||||| | |||| |||     
T  16794226 agagaaaaagatgaagatgggtgatttcaagtcaaaaattgattaaaaaccaccttcaataaagaaactgaaaaagaaaatctagagacaaaaaactagc 16794127  T
Q  209 gccgacttgttggagag 225  Q
     ||| ||| ||||||||    
T  16794126 accggctttttggagag 16794110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 27747164 - 27747372
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    ||||||||| ||||||||||| ||||||||||  ||||| ||||||||| ||||| ||||| || || ||||||||| | ||||||||| |||||||| |    
T  27747164 cgcacaagatgacgaacaacacaccaccacacccagatggtgaaatcacgaagaa-aaaacttatatttatgtgaaaattacttatttaaattgaaatgg 27747262  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattag 207  Q
    ||| |||||||| ||||    |||||||| ||||| |||||||| ||||| |||||  |||||||||   ||| ||||||||||||||||| |||| |||    
T  27747263 agataaaaagatgaagaatggtgatttcaagtcaaaaattgacccaaaactaccccttaatgaagaagttggaagagaaaacctagagagaaaaaaatag 27747362  T
Q  208 ggccgacttg 217  Q
    | || |||||    
T  27747363 gtccaacttg 27747372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 111
Target Start/End: Complemental strand, 33298886 - 33298787
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 110  Q
    |||||||||| |||||||| ||||| | |||| ||||| ||||||||||||   ||||||||||||||||||||| |||||||||||||||||| |||||    
T  33298886 cacaagacgatgaacaacacaccactagacttggatgacgaaatcacaaaggt-aaaacctagatctatgtgaaaatcacttatttagattgaattagag 33298788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 149
Target Start/End: Original strand, 39153195 - 39153336
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaa---acctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||||||||||||||| |||||||||||  ||||| |||||||| ||||| |||   ||||| |||||||||||| ||||||||||| ||||||||     
T  39153195 cacaagacgacgaacaacacaccaccacactcggatgacgaaatcacgaagaaaaaaaatacctaaatctatgtgaaaatcacttatttaaattgaaatt 39153294  T
Q  108 ga-gagaaaaagataaagatgaatgatttcaggtcaagaattg 149  Q
    ||  ||| |||||| ||||||| ||||||| |||||| |||||    
T  39153295 gactagacaaagatgaagatgagtgatttc-ggtcaaaaattg 39153336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 12173455 - 12173369
Alignment:
Q  88 cacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaa 175  Q
    ||||||||| |||||||||||||| |||||||||||||||  |||||||||||||| | |||||| |||||||||| | |||||||||    
T  12173455 cacttattttgattgaaatagaga-aaaaagataaagatgggtgatttcaggtcaaaagttgacccaaaaccaccctcgatgaagaaa 12173369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Complemental strand, 12417883 - 12417797
Alignment:
Q  88 cacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaa 175  Q
    ||||||||| |||||||||||||| |||||||||||||||  |||||||||||||| | |||||| |||||||||| | |||||||||    
T  12417883 cacttattttgattgaaatagaga-aaaaagataaagatgggtgatttcaggtcaaaagttgacccaaaaccaccctcgatgaagaaa 12417797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 24853530 - 24853643
Alignment:
Q  50 gaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattg 149  Q
    ||||| || |||||||||||  | ||||||||| || ||||||||||| ||| ||||||| |||||||||  ||||||| ||||||| |||||| |||||    
T  24853530 gaaataacgaagaagaaaactcatatctatgtgcaaatcacttatttacattaaaatagaaagaaaaagacgaagatgagtgatttcgggtcaataattg 24853629  T
Q  150 -acctaaaaccacc 162  Q
     |||||||||||||    
T  24853630 aacctaaaaccacc 24853643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 36532931 - 36532805
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    |||||||||||||||||||||| | |||||||| |||| ||| ||| | | ||||| |||||||| || |||||||||    |||||||| |||||||||    
T  36532931 ccgcacaagacgacgaacaacacaacaccacacctagacgataaaacctcgaagaa-aaaacctaaatatatgtgaaaactccttatttaaattgaaata 36532833  T
Q  108 gagagaaaaagataaagatgaatgattt 135  Q
    |||| ||||| || |||||| |||||||    
T  36532832 gagataaaaaaattaagatggatgattt 36532805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 18734061 - 18733858
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||| ||||||||| | |  |||| | ||| ||||| ||||| ||||| |||| | |||||||| | ||| ||| ||||||| ||    
T  18734061 aacatcgccgcacaagacggcgaacaacacatcgtcacattgagacgatgatatcacgaagaaaaaaaaccagatctatttaaaa-tcaattatttaaat 18733963  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac--ccccaatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||||||||||||||| ||||  | ||||||| | | || | |||||| | ||||||  || |||| ||||||  ||| ||||  |||||||||||    
T  18733962 tgaaatagagagaaaaagatgaagaatactgatttcggttaaaaatttgacccacaaccacctcctcaataaagaaaatggaagagaggacctagagaga 18733863  T
Q  199 gaaaa 203  Q
    |||||    
T  18733862 gaaaa 18733858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 17430944 - 17431030
Alignment:
Q  36 cacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagat 120  Q
    |||||| |||||| ||||| || ||||||||||  ||||||||||| |||||  |||||||||||||||| ||||||||| ||||||    
T  17430944 cacactcagatgacgaaataacgaagaagaaaaaacctagatctatctgaaaagcacttatttagattgacatagagagagaaagat 17431030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 105
Target Start/End: Complemental strand, 37971297 - 37971199
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    |||||||||||||||||||||||||| | || |||||||| || ||||||||||| | ||| | || | |  |||||||| |||||||||||||||||||    
T  37971297 cgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaa-aggaacaacttggtagatgtgaaaatcacttatttagattgaaa 37971199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 120
Target Start/End: Original strand, 17427325 - 17427380
Alignment:
Q  65 aaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagat 120  Q
    ||||||||||||||| |||||  |||||||||| | ||||||||||||||||||||    
T  17427325 aaaacctagatctatttgaaaagcacttatttacactgaaatagagagaaaaagat 17427380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 7883316 - 7883370
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || ||||||||||| |||||||||||    
T  7883316 cgccgcacaagacgacgaacaacacaacgccgcacttagatgacgaaatcacaaa 7883370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 12184262 - 12184168
Alignment:
Q  65 aaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc 162  Q
    |||| ||||| ||||||||||  ||||||||||||||||||||  |||||||||||||  | || ||||||| |||||| | |||||| |||||||||    
T  12184262 aaaaactagagctatgtgaaaaacacttatttagattgaaata--gagaaaaagataatta-gagtgatttcgggtcaaaagttgacccaaaaccacc 12184168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 162
Target Start/End: Complemental strand, 12428690 - 12428596
Alignment:
Q  65 aaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc 162  Q
    |||| ||||| ||||||||||  ||||||||||||||||||||  |||||||||||||  | || ||||||| |||||| | |||||| |||||||||    
T  12428690 aaaaactagagctatgtgaaaaacacttatttagattgaaata--gagaaaaagataatta-gagtgatttcgggtcaaaagttgacccaaaaccacc 12428596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 23230657 - 23230603
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||||| | || |||||||| || |||||||||||    
T  23230657 cgccgcacaagacgacgaacaacaaatcgccgcacttagacgacgaaatcacaaa 23230603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 18890861 - 18890949
Alignment:
Q  78 atgtgaaagtcacttatttagattgaaatagagag--aaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    |||||||| ||||||||||||||||||| | || |  ||||||||  |||||| |||||  ||||||| ||||||||||||| ||||||    
T  18890861 atgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgcagatgagtgattctaggtcaaaaattgacctaaaatcacccc 18890949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8443584 - 8443639
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatca 56  Q
    |||| |||||||||||||||||||||||| | |||| |||||||| || |||||||    
T  8443584 aacaacgccgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatca 8443639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 20553316 - 20553379
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac 69  Q
    ||||||| |||||||||||||||||| | || |||||||| || ||||||||||| || |||||    
T  20553316 cgccgcataagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaaaaaaaaaac 20553379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 3673453 - 3673401
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||| |||||||||||||||| | |||| |||||||| || |||||||||||    
T  3673453 ccgcataagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaa 3673401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 26469351 - 26469430
Alignment:
Q  77 tatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaa 157  Q
    ||||||||| ||||||||||||||||||| |||  |||||| ||  ||||| ||||||  ||||||| || ||||||||||    
T  26469351 tatgtgaaaatcacttatttagattgaaa-agaaggaaaaaaattcagatggatgattctaggtcaaaaaatgacctaaaa 26469430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 29617347 - 29617375
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaaca 29  Q
    |||||||||||||||||||||||||||||    
T  29617347 aacagcgccgcacaagacgacgaacaaca 29617375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 180; Significance: 5e-97; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 9 - 236
Target Start/End: Complemental strand, 51871893 - 51871667
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  51871893 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaagctagatctatgtgaaagtcacttatttagattgaaatag 51871795  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagagaaaattagg 208  Q
    |||||||||||| |||| |  |||||| |||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  51871794 agagaaaaagatgaagaggggtgattttaggtcaagaattgacccaaaaccacccccaatgaagaaacgagaagagaaaacctagagagagaaaattagg 51871695  T
Q  209 gccgacttgttggagagggaggggaaga 236  Q
    ||||||||||||||||||||| ||||||    
T  51871694 gccgacttgttggagagggagaggaaga 51871667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 51868688 - 51868897
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  51868688 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagat 51868787  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||| |  ||||||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  51868788 tgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattaacccaaaaccaccccccaatgaagaaacgggaagagaaaacctaaagagag 51868887  T
Q  200 aaaattaggg 209  Q
    ||||||||||    
T  51868888 aaaattaggg 51868897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 7342760 - 7342524
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||||||    
T  7342760 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacatagatctacgtaaaagtcacttatttagat 7342661  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac-ccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||||| | ||||| || |||| |  |||||||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  7342660 tgaaatagataaaaaaatatgaagaggggtgatttcaggtcaaaaattgacccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagag 7342561  T
Q  200 aaaattagggccgacttgttggagagggaggggaaga 236  Q
    ||||||||||||| ||| |||||||||||| ||||||    
T  7342560 aaaattagggccggcttattggagagggagaggaaga 7342524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 50166147 - 50166367
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| |||||||||||| |||||||||||||||||||    
T  50166147 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacatagaaaaaaacctaaatctatgtgaaattcacttatttagattgaaa 50166246  T
Q  106 tagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagagaaaatt 205  Q
    |||| ||||||||||||||| |    |||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50166247 tagatagaaaaagataaagaggggcaatttcaggtcaataattgacccaaaaccacccccaatgaagaaacgggaagagaaaacctagagagagaaaatt 50166346  T
Q  206 agggccgacttgttggagagg 226  Q
    | || || |||||||||||||    
T  50166347 atgggcggcttgttggagagg 50166367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 9172528 - 9172307
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaca--aagaagaaaacctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  9172528 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgataaaatcacacaaagaaaaaaacctagatctatgtgaaagtcacttatttag 9172429  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac-ccccaatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||||||||| ||||| || |||| |  ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||| |||    
T  9172428 attgaaatagagaaaaaaatatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccccccaatgaagaaatgggatgagaaaacttagtgag 9172329  T
Q  198 agaaaattagggccgacttgtt 219  Q
    ||||||||||||||| ||||||    
T  9172328 agaaaattagggccggcttgtt 9172307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 9180510 - 9180289
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaca--aagaagaaaacctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  9180510 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgataaaatcacacaaagaaaaaaacctagatctatgtgaaagtcacttatttag 9180411  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac-ccccaatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||||||||| ||||| || |||| |  ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||| ||| |||    
T  9180410 attgaaatagagaaaaaaatatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccccccaatgaagaaatgggatgagaaaacttagtgag 9180311  T
Q  198 agaaaattagggccgacttgtt 219  Q
    ||||||||||||||| ||||||    
T  9180310 agaaaattagggccggcttgtt 9180289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 25406327 - 25406539
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25406327 aacaacgccacacaagacgacgaacaataaaccaccacacttagatgacgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagat 25406426  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||| |  ||||||||||||||||||||||| |||| || |||||||||||||||||||| || ||||| |||||| ||    
T  25406427 tgaaatagagagaaaaagatgaagaggtgtgatttcaggtcaagaattgacccaaaatcaccccccaatgaagaaacgggaagaaaaaacttagagaaag 25406526  T
Q  200 aaaattagggccg 212  Q
    ||||||| |||||    
T  25406527 aaaattaaggccg 25406539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 14545557 - 14545340
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  14545557 aacagcgtcgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaatcacttatttagat 14545459  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||||||| ||||||| ||||||||||||||||||||||  ||||||||| | | ||| | || |  || ||||||||||||||||||    
T  14545458 tgaaatatagagaaaaagatgaagatgagtgatttcaggtcaagaattgacacaaaaccaccgctcgatggaaaatctagaagagaaaacctagagagag 14545359  T
Q  200 aaaattagggccgacttgt 218  Q
    |||| |||||||| |||||    
T  14545358 aaaactagggccggcttgt 14545340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 28035177 - 28035016
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  28035177 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagat 28035078  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc 162  Q
    |||||||||||||||||||| ||||||| |||||||||||||| |||||||| |||||||||    
T  28035077 tgaaatagagagaaaaagatgaagatgagtgatttcaggtcaataattgacccaaaaccacc 28035016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 40881055 - 40881271
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||| |||||||||| |||||| ||||| |||||||    
T  40881055 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatctcaaaaaaaaaaaacctagatctaagtgaaaatcactcatttaga 40881154  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagag--a 196  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||||||| ||| |||||||||||||| | ||||||||||||||  |    
T  40881155 ttgaaatagagagaaaaagatgaagatgagtgattttaggtcaagaattgacccaaaaccatccctcaatgaagaaacggtaagagaaaacctagagaga 40881254  T
Q  197 gagaaaattagggccga 213  Q
    |||||||||||| ||||    
T  40881255 gagaaaattaggaccga 40881271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 35584661 - 35584883
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa---cctagatctatgtgaaagtcacttattta 97  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| || |||| |||||||| ||||   ||||||||||||||||| |||||||||||    
T  35584661 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagattataaaattacaaagaaaaaaaaaacctagatctatgtgaaaatcacttattta 35584760  T
Q  98 gattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagaga 196  Q
    |||||||||| |||||||||||| ||||||| ||||||||||| ||||||||||| |||| |||||| |||||||||||  | | |||||||||||||||    
T  35584761 gattgaaataaagagaaaaagatgaagatgagtgatttcaggttaagaattgacccaaaatcacccctcaatgaagaaattgtaagagaaaacctagaga 35584860  T
Q  197 gagaaaattagggccgacttgtt 219  Q
     |||||| |||||| ||||||||    
T  35584861 aagaaaactagggcggacttgtt 35584883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 5324608 - 5324825
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || || || |||||| |||||||||||||||||||||    
T  5324608 ccgcacaagacggcgaacaacaaaccaccacacttagatgatgaaatcacaaagga-aaaacttaaatttacgtgaaaatcacttatttagattgaaata 5324706  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
    ||||||||||||| ||||    ||||| ||||||||||||||||| |||| || ||| ||||||||||||  || ||||||| |||||||||||||||||    
T  5324707 gagagaaaaagatgaagagaggtgattccaggtcaagaattgacccaaaatcatccctcaatgaagaaacttgaagagaaaatctagagagagaaaatta 5324806  T
Q  207 gggccgacttgttggagag 225  Q
    |||| ||||||||||||||    
T  5324807 gggctgacttgttggagag 5324825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 5701297 - 5701066
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||     
T  5701297 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttaa 5701198  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||||| |||||||||||| |||| |  ||||||||||||||| ||||||| |||  |||||| |||| ||||||  | | |||||||| |||||||    
T  5701197 attgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagtattgacccaaagtcacccctcaataaagaaattgtaagagaaaacttagagag 5701098  T
Q  198 agaaaattagggccgacttgttggagagggag 229  Q
    |||||| |||||||| ||| ||||||||||||    
T  5701097 agaaaactagggccggcttattggagagggag 5701066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 12 - 229
Target Start/End: Complemental strand, 27872765 - 27872552
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 111  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||||||     
T  27872765 acaagacgacgaacaacaaaccaccacacttagatgatgcaatcacgaagaa-aaaacttagatctatgtgaaaatcacttatttagattgaaatagagc 27872667  T
Q  112 gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctag--agagagaaaattaggg 209  Q
    ||||||||| ||||||  |||||||| ||||| |||||||| ||||||||||     ||||||||  || ||||||||||||  ||||| ||||||||||    
T  27872666 gaaaaagatgaagatgggtgatttcatgtcaaaaattgacccaaaaccaccc-----gaagaaactagaagagaaaacctagaaagagaaaaaattaggg 27872572  T
Q  210 ccgacttgttggagagggag 229  Q
    |||||||||| |||||||||    
T  27872571 ccgacttgttagagagggag 27872552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 36 - 230
Target Start/End: Complemental strand, 40646692 - 40646496
Alignment:
Q  36 cacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatt 134  Q
    ||||||||||||||||||| |||||||| |||| |||||||||| |||||| ||||||||||||||||||||| | |||||||||| ||||||| |||||    
T  40646692 cacacttagatgatgaaattacaaagaaaaaaaacctagatctacgtgaaaatcacttatttagattgaaataaatagaaaaagatgaagatgagtgatt 40646593  T
Q  135 tcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagagggagg 230  Q
    | |||||||||||||||| ||||||||||| |||||||||||  | | |||||||||||||||||||||| |||||||| |||||||||||||||||    
T  40646592 ttaggtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccggcttgttggagagggagg 40646496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 11453973 - 11453773
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||    
T  11453973 aacagcgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaaccacttatttagat 11453875  T
Q  101 tgaaat--agagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||  |||||||||||||| |||| || |||||||| ||||| ||||||||  |||||| ||| |||||||||||| | | ||||||||||||||||    
T  11453874 tgaaatagagagagaaaaagatgaaga-gagtgatttcaagtcaaaaattgaccagaaaccatccctcaatgaagaaactgaaagagaaaacctagagag 11453776  T
Q  198 aga 200  Q
    |||    
T  11453775 aga 11453773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 12 - 225
Target Start/End: Original strand, 18569364 - 18569576
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 111  Q
    |||||| ||||||||||| ||||||||||| | |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  18569364 acaagatgacgaacaacacaccaccacactcaaatgacgaaatcacgaagaagaaaacctagatctatgtgaaaatcacttatttagattgaaatagaga 18569463  T
Q  112 gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggc 210  Q
    ||||||||| ||||    |||||||  ||||| |||||||| ||||||||||| |||||||||||| ||| ||||||||||  ||||||||||||||| |    
T  18569464 gaaaaagatgaagacaggtgatttcttgtcaaaaattgacccaaaaccacccctcaatgaagaaactggaagagaaaacct--agagagaaaattaggac 18569561  T
Q  211 cgacttgttggagag 225  Q
    || ||||||||||||    
T  18569562 cggcttgttggagag 18569576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 8 - 225
Target Start/End: Original strand, 33291468 - 33291687
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||||||||| |||||||||    
T  33291468 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacatagatttatgtgaaaatcacttatttatattgaaata 33291567  T
Q  108 gagag-aaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaatt 205  Q
    || || ||||| || |||| |  ||||||||||||||||||||||| ||||||||||| ||||||| ||||   | || |||| ||||||| |||||| |    
T  33291568 gaaagaaaaaaaatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaaaaactataagaaaaaatctagagaaagaaaact 33291667  T
Q  206 agggccgacttgttggagag 225  Q
    ||||||||||||||| ||||    
T  33291668 agggccgacttgttgaagag 33291687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 30818399 - 30818588
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| ||||||||| ||||||||||||||||||||||||    
T  30818399 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaaaaaaaaaac-tagatttatgtgaaaatcacttatttagattgaaatagag 30818497  T
Q  111 agaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagaga 200  Q
    |||||||||| ||||||  |||||||||||||| |||||||| ||||| ||||| |||||||||||| | |  ||||||| ||||||||||    
T  30818498 agaaaaagatgaagatgggtgatttcaggtcaataattgacccaaaactacccctcaatgaagaaactgtaaaagaaaacttagagagaga 30818588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 45426109 - 45426331
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||| ||||||||||||||| ||||||||||||||    
T  45426109 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa----aaaacttagatctatgtgaaaatcacttatttagat 45426204  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagaga 198  Q
    | |||||||||||||||||| || ||   ||||||||  ||||||||||||| |||||||||||  |||||||||||| |||  ||||||||||||||||    
T  45426205 ttaaatagagagaaaaagatgaaaataggtgatttcaaatcaagaattgacccaaaaccaccccctcaatgaagaaactggaaaagaaaacctagagaga 45426304  T
Q  199 gaaaattagggccgacttgttggagag 225  Q
     ||||  ||||||| ||| || |||||    
T  45426305 aaaaaccagggccggctttttcgagag 45426331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 38520592 - 38520784
Alignment:
Q  16 gacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaa 115  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  38520592 gacgacgaacaacaaaccaccactcttagatgatgaaatcacgaagaa-aaaacatagatctatgtgaaaatcacttatttagatcgaaatagagagaaa 38520690  T
Q  116 aagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc--aatgaagaaacgggatgagaaaacctagagagagaaaattag 207  Q
    ||||| ||||||| ||||||||||| || |||||| | ||||||||||||  ||||||||||| | | ||||||||||||||| | ||||||||    
T  38520691 aagatgaagatgagtgatttcaggtaaaaaattgatccaaaaccacccccttaatgaagaaactgaaagagaaaacctagagaaaaaaaattag 38520784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 19723371 - 19723176
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  19723371 aacaacgccgcagaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagat 19723272  T
Q  101 tgaaatagagagaaaaag-ataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagaga 196  Q
    |||| ||||||||||||  || ||||    |||||||| ||||| |||||||| |||||||||| ||||||||||||   | |||||||||||||||    
T  19723271 tgaa-tagagagaaaaaatatgaagagaggtgatttcaagtcaataattgacccaaaaccaccctcaatgaagaaactataagagaaaacctagaga 19723176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 20266330 - 20266176
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||| |||||||||||||||| ||||||||||||||||||||| ||    
T  20266330 cacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaagctagatctatgtgaaaatcacttatttagattgaaataaag 20266231  T
Q  111 agaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc 165  Q
    |||||||||| ||||||  |||||| || ||||||||||||| ||||||||||||    
T  20266230 agaaaaagatgaagatgggtgattttagatcaagaattgacccaaaaccaccccc 20266176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 19715938 - 19716168
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa---cctagatctatgtgaaagtcacttattta 97  Q
    |||| ||| ||||||||||||||||||||| | ||||||||||||||||||||| |||| ||| ||||   |||| |||||||||||| |||||||||||    
T  19715938 aacaacgctgcacaagacgacgaacaacaatc-accacacttagatgatgaaattacaatgaaaaaaaaaacctaaatctatgtgaaaatcacttattta 19716036  T
Q  98 gattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagaga 196  Q
    |||||||||| |||||||||||| |||| |  ||||||||| ||||||||||||| ||||||||| | |||||||||||  | | || |||||||| |||    
T  19716037 gattgaaataaagagaaaaagatgaaga-gggtgatttcagatcaagaattgacccaaaaccacctctcaatgaagaaattgtaagaaaaaacctaaaga 19716135  T
Q  197 gagaaaattagggccgacttgttggagagggag 229  Q
    ||||||| |||||||||||||||| ||||||||    
T  19716136 gagaaaactagggccgacttgttgaagagggag 19716168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 50272183 - 50272358
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||| ||||||||||||||| ||||| ||||||| ||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||    
T  50272183 aacaacgccgcacaaaacgacgaacaacaaatcaccaaacttagaagatgaaatcacaaagaaaaaaacttagatctatgtgaaaattacttatttagat 50272282  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaa 175  Q
    ||||||| |||||||||||| || | |  ||||||||||||||||||||||| ||||||||||  |||||||||||    
T  50272283 tgaaataaagagaaaaagatgaataggggtgatttcaggtcaagaattgacccaaaaccacccttcaatgaagaaa 50272358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 7997827 - 7997662
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||  ||||||||||||||||| |||||||||||     
T  7997827 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttat 7997728  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    ||||||||| |||||||||||| |||| |  ||||||||| |||| |||| ||| |||||||||||    
T  7997727 attgaaataaagagaaaaagatgaagaagggtgatttcagatcaaaaattaacccaaaaccacccc 7997662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 17 - 228
Target Start/End: Original strand, 45805875 - 45806081
Alignment:
Q  17 acgacgaacaacaaaccaccacacttagatgatgaaa-tcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaa 115  Q
    ||||||||||||||||||||||||||||||||||||| ||||  |          ||||| |||||||||||||||||||||||||||||||||||||||    
T  45805875 acgacgaacaacaaaccaccacacttagatgatgaaagtcacttatt--------tagatttatgtgaaagtcacttatttagattgaaatagagagaaa 45805966  T
Q  116 aagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc--aatgaagaaacgggatgagaaaacctagagagagaaaattagggccga 213  Q
    ||||  ||||    ||||||||| |||| |||||||| ||||||||||||  ||| ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  45805967 aagaggaagaaaggtgatttcagatcaaaaattgacccaaaaccacccccccaataaagaaacgggaagagaaaatctagagagagaaaattaggaccga 45806066  T
Q  214 cttgttggagaggga 228  Q
    |||||||||||||||    
T  45806067 cttgttggagaggga 45806081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 34519170 - 34519054
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  34519170 aacaacgccgcacaaaacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaagaa-aaaacctagatctatgtgaaaatcacttatttagat 34519072  T
Q  101 tgaaatagagagaaaaag 118  Q
    ||||||||||||||||||    
T  34519071 tgaaatagagagaaaaag 34519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9919427 - 9919303
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| ||| ||||||||||||||    
T  9919427 aacaacgccgtacaagacgacgaacaacaaaccaccacacttagatggtgaaatcacaaagaaaaaaacatagatctatgtaaaaatcacttatttagat 9919328  T
Q  101 tgaaatagagagaaaaagataaaga 125  Q
    |||||||||||||||||||| ||||    
T  9919327 tgaaatagagagaaaaagatgaaga 9919303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 9 - 175
Target Start/End: Complemental strand, 30879106 - 30878938
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacc-tagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| |||| | ||||||||||||||| ||||||||||||||| |||||    
T  30879106 cgcacaagacgacgaacaacaaatcaccacacttaaatgatgaaattacaaagaaaaaaaacatagatctatgtgaaaatcacttatttagattaaaata 30879007  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaa 175  Q
     |||||||||||| ||||   ||||| ||||||||| |||||||| ||||||||||| |||||||||||    
T  30879006 aagagaaaaagatgaagagagatgatctcaggtcaaaaattgacccaaaaccacccctcaatgaagaaa 30878938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 3871446 - 3871285
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  3871446 aacaacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacttagatctatgtgaaaatcacttatttagat 3871348  T
Q  101 tgaaatagagagaaaaagat-aaagatgaatgatttcaggtcaagaattgacctaaaaccacc 162  Q
    |||||| |||||| |||||| |||   |  ||||||||| ||||||||| ||| |||||||||    
T  3871347 tgaaattgagagagaaagatgaaaagggggtgatttcagatcaagaattaacccaaaaccacc 3871285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 24 - 209
Target Start/End: Complemental strand, 50148389 - 50148201
Alignment:
Q  24 acaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagata 121  Q
    |||||||| ||||||||||||| |||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||| ||||| |||||||| |||     
T  50148389 acaacaaatcaccacacttagaagatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagaaaaggatg 50148290  T
Q  122 aagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattaggg 209  Q
    |||||| |||||||||| || |||||||||| ||||||||||| |||||||||||    | ||||||| |||||||||||||| |||||    
T  50148289 aagatggatgatttcagatctagaattgacccaaaaccacccctcaatgaagaaattataagagaaaatctagagagagaaaactaggg 50148201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 65 - 228
Target Start/End: Original strand, 25728066 - 25728227
Alignment:
Q  65 aaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc- 163  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||||||| ||||||||||     
T  25728066 aaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggagtgatttcaggtcaagaattgacccaaaaccacccg 25728165  T
Q  164 ccaatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagaggga 228  Q
     || ||||||||  | | |||   | ||||||| ||||||||||| |||||||||||||||||||    
T  25728166 tcattgaagaaattgtaagag---atctagagaaagaaaattaggaccgacttgttggagaggga 25728227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 9 - 223
Target Start/End: Complemental strand, 44637451 - 44637235
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    |||||||||| |||||||||| | ||||||| |||||||| |||||||||||||||||| | |||||||| |||||| |||||||||||||||||||||     
T  44637451 cgcacaagactacgaacaacacatcaccacatttagatgacgaaatcacaaagaagaaa-cttagatctacgtgaaaatcacttatttagattgaaataa 44637353  T
Q  109 agagaaaaa-gataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc--aatgaagaaacgggatgagaaaacctagagagagaaaa-t 204  Q
    ||| ||||| ||| ||||    |||||| | ||||| |||||||| ||||||||||||  |||||||||||  || ||||||| ||| ||||| |||| |    
T  44637352 agataaaaaagatgaagagaggtgattttatgtcaa-aattgacccaaaaccacccccttaatgaagaaactagaagagaaaatctaaagagaaaaaaat 44637254  T
Q  205 tagggccgacttgttggag 223  Q
    ||||||||| |||||||||    
T  44637253 tagggccgatttgttggag 44637235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 41081747 - 41081980
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||| ||| |||||||| |||||||||||  ||||| ||| |||| | ||| |||||||||||||||| | || |||||||| |||||    
T  41081747 aacaacgccgcacaagccgatgaacaacacaccaccacactcggatgacgaagtcacgatgaa-aaaacctagatctatgcgcaaatcacttatatagat 41081845  T
Q  101 tgaaatagag-agaaaaagataaagatgaatgatttcaggtcaagaattga-cctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    |||||| ||  |||||||||| ||||||| |||||||||||||| |||||| || |||||||||||  || ||||||||  ||||| ||||| |||||||    
T  41081846 tgaaatggactagaaaaagatgaagatgagtgatttcaggtcaaaaattgaccccaaaaccaccccataacgaagaaactagatgaaaaaacttagagag 41081945  T
Q  198 agaaaattagggccgac---ttgttggagagggag 229  Q
    | |||| || |||||||   |||||||||||||||    
T  41081946 aaaaaactaaggccgacttattgttggagagggag 41081980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 226
Target Start/End: Original strand, 7312153 - 7312370
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 110  Q
    |||||||| | |||||||| |||||||||||||||| | |||||||| ||||| |||||||||||||| |||||| ||| |||||||  |||||||||||    
T  7312153 cacaagacaatgaacaacacaccaccacacttagat-acgaaatcacgaagaa-aaaacctagatctacgtgaaaatcatttatttaatttgaaatagag 7312250  T
Q  111 agaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacggg---atgagaaaacctagagagagaaaatta 206  Q
    |||||||||| ||||  | | |||| ||||||| |||||||| ||||| ||||| |||||||||||| ||   |  | |||||||||||||| |||||||    
T  7312251 agaaaaagatgaagagaagtaattttaggtcaaaaattgacccaaaactacccctcaatgaagaaactggaaaaaaaaaaaacctagagagaaaaaatta 7312350  T
Q  207 gggccgacttgttggagagg 226  Q
     | |||  ||||||||||||    
T  7312351 agaccggtttgttggagagg 7312370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 31836838 - 31836745
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||| ||||||||||||||    
T  31836838 ccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagat 31836745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 9687247 - 9687375
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag---------aagaaaacctagatctatgtgaaagtcact 91  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||         || |||||||| |||||||||||| |||||    
T  9687247 aacaacgccgcacaagatgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaataaaaacaaaaaaacctatatctatgtgaaaatcact 9687346  T
Q  92 tatttag----attgaaatagagagaaaa 116  Q
    |||||||    ||||||||||||||||||    
T  9687347 tatttagattaattgaaatagagagaaaa 9687375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 39927597 - 39927827
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||| ||||||||||||||||||| |||||||||||  ||||| |||||||| ||||| |||| |||||||||| ||||| | | ||||||||||    
T  39927597 aacaacgccacacaagacgacgaacaacacaccaccacactcggatgacgaaatcacgaagaaaaaaatctagatctatctgaaaattatttatttagat 39927696  T
Q  101 tgaaataga-gagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||  | || ||||| ||||  | |||||||| || || |||||||| ||||| || | | ||||| |||| ||| ||||||||||| ||||      
T  39927697 tgaaatagactataacaagatgaagagaagtgatttcatgttaaaaattgaccaaaaactacactc-atgaaaaaactggaagagaaaacctaaagagta 39927795  T
Q  200 aaaattagggccgacttgttggagagggaggg 231  Q
    |||| ||   ||| ||| ||||||||||||||    
T  39927796 aaaactaaaaccggcttattggagagggaggg 39927827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 39987427 - 39987304
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtg-aaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||| | |||||||||||  |||| ||||||||| ||||  |||| |||||||||| || ||| |||||||||||||    
T  39987427 aacaacgccgcacaagacgacgaacaatacaccaccacactcggatggtgaaatcacgaaga--aaaaactagatctatatgaaaaatcacttatttaga 39987330  T
Q  100 ttgaaatagagagaaaaagataaaga 125  Q
    |||||  |||||||||||||| ||||    
T  39987329 ttgaatcagagagaaaaagatgaaga 39987304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 30558736 - 30558813
Alignment:
Q  38 cacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaa 117  Q
    |||| |||||||||||||| |||||| ||||||||||||| ||||||| |||||| |||||||||||||||| |||||||    
T  30558736 cactcagatgatgaaatcataaagaa-aaaacctagatctgtgtgaaa-tcacttttttagattgaaatagaaagaaaaa 30558813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 51916739 - 51916898
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattga--- 103  Q
    ||||||||||||||| ||||||| | ||||  | ||||| |||||||||||||| | ||||| || ||| ||| |||||  ||||||||||||||||       
T  51916739 gccgcacaagacgactaacaacataacaccgtaattagacgatgaaatcacaaa-aggaaaaacttgatttatttgaaaaccacttatttagattgaaag 51916837  T
Q  104 aatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    || ||||| ||||||||  |||||| |||||| ||||||| || |  ||||||||||||||    
T  51916838 aaaagagaaaaaaagatgtagatgagtgattttaggtcaaaaaatagcctaaaaccacccc 51916898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 138
Target Start/End: Original strand, 18649989 - 18650062
Alignment:
Q  65 aaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcag 138  Q
    |||||||| || ||||||||| | |||||||||||| ||||||||||| ||||||||||| || ||||||||||    
T  18649989 aaaacctatatttatgtgaaaattacttatttagatcgaaatagagaggaaaagataaagctgcatgatttcag 18650062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 31836722 - 31836675
Alignment:
Q  182 gagaaaacctagagagagaaaattagggccgacttgttggagagggag 229  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||    
T  31836722 gagaaaacctagagagagaaaactagggccggcttgttggagagggag 31836675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 77
Target Start/End: Original strand, 48365817 - 48365883
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatct 77  Q
    |||||||| ||||||||||| ||||||||||| |||||| |||||||| ||||| |||||||||||||    
T  48365817 gcacaagatgacgaacaacacaccaccacactcagatgacgaaatcacgaagaa-aaaacctagatct 48365883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 9919282 - 9919238
Alignment:
Q  182 gagaaaacctagagagagaaaattagggccgacttgttggagagg 226  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  9919282 gagaaaatctagagagagaaaattagggccggcttgttggagagg 9919238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 5983851 - 5983797
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||||| | || |||||||| || |||||||||||    
T  5983851 cgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaa 5983797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 7836876 - 7836927
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||||||||||||| | | || |||||||| ||||||||||||||    
T  7836876 cgcacaagacgacgaacaacacaacgccgcacttagacgatgaaatcacaaa 7836927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 7337744 - 7337794
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||| | | || |||||||| ||||||||||||||    
T  7337744 gcacaagacgacgaacaacacaacgccgcacttagacgatgaaatcacaaa 7337794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 11462525 - 11462579
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||||||||||||||||||   ||  |||||||||| |||||||||||    
T  11462525 cgccgcacaagacgacgaacaacaaaatgccggacttagatgacgaaatcacaaa 11462579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 45415569 - 45415519
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||| | || |||||||| || |||||||||||    
T  45415569 gcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaa 45415519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 48217520 - 48217443
Alignment:
Q  147 ttgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagag 225  Q
    |||||| |||||||||  | |||||||||| | | ||||||||||||||| | |||| |||| ||||||||||||||||    
T  48217520 ttgacccaaaaccaccatcgatgaagaaactgtaagagaaaacctagaga-aaaaaactaggaccgacttgttggagag 48217443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 48365887 - 48365956
Alignment:
Q  94 tttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc 163  Q
    ||||| |||||| |||||||||||||| |||||   ||||||||  |||| |||||||| ||||||||||    
T  48365887 tttagtttgaaacagagagaaaaagatgaagataggtgatttcatttcaaaaattgacccaaaaccaccc 48365956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 176; Significance: 1e-94; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 16419192 - 16418957
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  16419192 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacaaagatctatgtgaaagtcacttatttagat 16419093  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagaga 200  Q
    |||||||||||||||||||| ||||||  |||||| |||| ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||    
T  16419092 tgaaatagagagaaaaagatgaagatgggtgattttaggttaagaattgactcaaaaccaccccaaatgaagaaacgggatgagaaaacctagagagaga 16418993  T
Q  201 aaattagggccgacttgttggagagggaggggaaga 236  Q
    |||||| ||||| |||||||||||||||| ||||||    
T  16418992 aaattaaggccggcttgttggagagggagaggaaga 16418957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 23947361 - 23947596
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  23947361 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaagaa-aaaacctagatctatgtgaaaatcacttatttagat 23947459  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||| ||| ||||||  ||||||||||||||||||||||| ||||||||||| ||||||||||||  || || |||||||||||||||    
T  23947460 tgaaatagagagaaaacgatgaagatgggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactagaagaaaaaacctagagagag 23947559  T
Q  200 aaaattagggccgacttgttggagagggaggggaaga 236  Q
    |||| ||||| || ||||||||| ||||||| |||||    
T  23947560 aaaactagggtcggcttgttggatagggaggagaaga 23947596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 12652978 - 12652749
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag----aagaaaacctagatctatgtgaaagtcacttattt 96  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    || |||| |||||||||||||||| ||||||||||    
T  12652978 aacaacgccgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcacaaaggaaaaaaaaaatctagatctatgtgaaaatcacttattt 12652879  T
Q  97 agattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagag 195  Q
    |||||||||||||||||||||||| |||| |  ||||||||||||||||||||||| ||||||||||| |||||||||||| |   ||||||||||||||    
T  12652878 agattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtgagagaaaacctagag 12652779  T
Q  196 agagaaaattagggccgacttgttggagag 225  Q
    |||||||| |||||||||||||||||||||    
T  12652778 agagaaaactagggccgacttgttggagag 12652749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 25064270 - 25064040
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||    
T  25064270 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttaga 25064171  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| |||||||||||| ||||    ||||||||||||||||||||||| ||||||||||| |||||||||||  | | |||||||||||||||||    
T  25064170 ttgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagaga 25064071  T
Q  199 gaaaattagggccgacttgttggagagggag 229  Q
    ||||| |||||||| ||||||||||||||||    
T  25064070 gaaaactagggccggcttgttggagagggag 25064040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 10228713 - 10228493
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||    
T  10228713 aacaacgccgcacaagacgacgaacaacaaaccatcacacttaaatgatgaaatcacaaagaaaaaaacatagatatatgtaaaagtcacttatttagat 10228614  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagaga 200  Q
    |||| |||||||| |||||| |||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    ||||    
T  10228613 tgaagtagagagagaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccccaatgaagaaacgggaagagaaaaccta----gaga 10228518  T
Q  201 aaattagggccgacttgttggagag 225  Q
    | |||||||||| ||||||||||||    
T  10228517 agattagggccggcttgttggagag 10228493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 8196450 - 8196675
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  8196450 aacaacgccgcacaagacgacgaacaacaaaccaccacacttatatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagat 8196549  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagaga 200  Q
    |||||||||||||||||||| || | |  |||||| |||||||||| ||| | |||||||||| |||||||||||| | |  |||||| |||||||||||    
T  8196550 tgaaatagagagaaaaagatgaatacgggtgattttaggtcaagaactgatccaaaaccaccctcaatgaagaaactgtaccagaaaatctagagagaga 8196649  T
Q  201 -aaattagggccgacttgttggagag 225  Q
     ||| || ||||| ||||||||||||    
T  8196650 gaaactaaggccggcttgttggagag 8196675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 17237328 - 17237543
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  17237328 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgctgaaatcacaaagaa-aaaacctagatctatgtgaaaataacttatttagat 17237426  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||||||| |||| |  |||||||| |||||||||||||| ||||||||||| ||||| | || |  ||  ||||||| |||||||||    
T  17237427 tgaaatatagagaaaaagatgaagaggggtgatttcatgtcaagaattgacccaaaaccacccctcaatggaaaatctagaaaagaaaacatagagagag 17237526  T
Q  200 aaaattagggccgactt 216  Q
    |||| ||||||||||||    
T  17237527 aaaactagggccgactt 17237543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 8497001 - 8496770
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||||||| ||||||||||||| |||| |||||| |||||||||  |||||||| ||||  ||||||||||||||||| ||||||||||||    
T  8497001 aacaacgccgcacaagatgacgaacaacaaatcaccgcacttaaatgatgaaactacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttag 8496902  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||||| |||||||||||| |||| |  ||||||||||||||||||||||  ||||||||||| |||||||||||  | | ||||||||||||||||    
T  8496901 attgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaattgtaagagaaaacctagagag 8496802  T
Q  198 agaaaattagggccgacttgttggagagggag 229  Q
    |||||| |||| ||||||| ||||||||||||    
T  8496801 agaaaactaggaccgacttattggagagggag 8496770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 33740621 - 33740797
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||    
T  33740621 aacaacgccgcacaaaacgacgaacaacaaaccgccacacttagatgatgaaatcacaaagaaaaaaacctaaatctatgtgaaaatcacttatttagat 33740720  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaac 176  Q
    |||||||||||||||||||| |||| |  |||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  33740721 tgaaatagagagaaaaagatgaagaggggtgattttaggtcaagaattgaccaaaaaccacccctcaatgaagaaac 33740797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 12165874 - 12165657
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||| |||||||||||| ||||||||||||||    
T  12165874 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgataaaaccacaaagaa-aaaacctaaatctatgtgaaaatcacttatttagat 12165776  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac-ccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||||  | |||||||| |||| || |||||||||||||| |||||||| ||||  || || |||||||||||| ||| ||||||||| ||||||||    
T  12165775 tgaaataggcataaaaagatgaagaggagtgatttcaggtcaataattgacccaaaataactcctcaatgaagaaactggaagagaaaaccgagagagag 12165676  T
Q  200 aaaattagggccgacttgt 218  Q
     |||||||| ||| |||||    
T  12165675 taaattaggaccggcttgt 12165657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 8028161 - 8028390
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||    
T  8028161 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcataaagaaaaaaacttagatctatgtgaaaatcacttatttagat 8028260  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||| |||||||||||||| |||  |  ||||| ||| |||| |||||||| |||| |||| | |||||||||||| | |  |||||||||| ||||||    
T  8028261 tgaaacagagagaaaaagatgaagtggggtgattccagatcaataattgacccaaaatcacctctcaatgaagaaactgtactagaaaacctaaagagag 8028360  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    ||| ||| || || ||||||| ||||||||    
T  8028361 aaagttaaggtcggcttgttgaagagggag 8028390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 4088494 - 4088264
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||| ||||||||||||||    
T  4088494 aacaacgccgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcaaaaagaaaaaaaactagatctatgtgaaaatcacttatttagat 4088395  T
Q  101 tgaaatagaga-gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    || ||||||||  ||||| || ||||||  ||||||||||||||||||||||| ||||||||||| |||| ||||| | | |  ||||||||||||||      
T  4088394 tgtaatagagataaaaaaaatgaagatgggtgatttcaggtcaagaattgacccaaaaccacccctcaataaagaacctgtaaaagaaaacctagagatg 4088295  T
Q  199 gaaaattagggccgacttgttggagagggag 229  Q
     ||||||| | |||| || ||||||||||||    
T  4088294 aaaaattaagaccgatttattggagagggag 4088264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 8 - 203
Target Start/End: Original strand, 4984617 - 4984823
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-------aagaaaacctagatctat----gtgaaagtcacttattt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||    |||||| ||||||||||    
T  4984617 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaaggaaaaacaaaaaaacctagatctatatatgtgaaaatcacttattt 4984716  T
Q  97 agattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagag 195  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||| | | ||||||||||| ||    
T  4984717 agattgaaatagagagaaaa-gatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaacctaaag 4984815  T
Q  196 agagaaaa 203  Q
    ||| ||||    
T  4984816 agataaaa 4984823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 9 - 219
Target Start/End: Original strand, 7876095 - 7876300
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||  |||||||||||||||| |||||||||||||||||||||    
T  7876095 cgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattgcaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaata 7876194  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
     |||||||||||| ||||||  |||||| ||||||| |||||| | ||||||||||| ||||||||||||       |||||||||||||||||||| ||    
T  7876195 aagagaaaaagatgaagatgggtgattttaggtcaataattgatccaaaaccacccctcaatgaagaaac-------gaaaacctagagagagaaaacta 7876287  T
Q  207 gggccgacttgtt 219  Q
    | || ||||||||    
T  7876288 gagctgacttgtt 7876300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 42 - 219
Target Start/End: Complemental strand, 33109826 - 33109649
Alignment:
Q  42 tagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtc 141  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| | ||||| |||||    
T  33109826 tagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatggacgattttaggtc 33109728  T
Q  142 aagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgtt 219  Q
    || |||||||| ||||||||||  |||||||||||| ||| ||||||||||| | |||||||| |||||||| ||||||    
T  33109727 aaaaattgacccaaaaccacccgtcaatgaagaaactggaagagaaaacctaaaaagagaaaactagggccggcttgtt 33109649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 7881145 - 7881358
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| || |||| |||||||||||||||| |||||||||||||    
T  7881145 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattgcaaagaaaaaaaatctagatctatgtgaaaatcacttatttaga 7881244  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| |||||||||||| ||||    |||||||| ||||| |||||| | ||||||||||| ||||||||||||       |||||||||||||||    
T  7881245 ttgaaataaagagaaaaagatgaagaaaggtgatttcaagtcaataattgatccaaaaccacccctcaatgaagaaac-------gaaaacctagagaga 7881337  T
Q  199 gaaaattagggccgacttgtt 219  Q
    ||||| ||| || ||||||||    
T  7881338 gaaaactagagctgacttgtt 7881358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 17334812 - 17334581
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa---cctagatctatgtgaaagtcacttattta 97  Q
    |||| ||||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||| ||||   | ||||||||||||||| |||||||||||    
T  17334812 aacaacgccgcacaagacgacgtacaacaaatcaccacacttagattatgaaattacaaagaaaaaaaaaacttagatctatgtgaaaatcacttattta 17334713  T
Q  98 gattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagag 197  Q
    |||||||||| | |||||||||| |||||   ||||||||| |||||||| || | |||||||||| |||||||||||  | | ||||||| ||||||||    
T  17334712 gattgaaataaacagaaaaagatgaagattggtgatttcagatcaagaatcgatccaaaaccaccctcaatgaagaaattgtaagagaaaatctagagag 17334613  T
Q  198 agaaaattagggccgacttgttggagagggagg 230  Q
    |||||| ||||| ||  || |||||||||||||    
T  17334612 agaaaa-tagggtcggtttattggagagggagg 17334581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 35001624 - 35001506
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||    
T  35001624 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacatagatctatgtaaaagtcacttatttagat 35001525  T
Q  101 tgaaatagagagaaaaaga 119  Q
    | |||||||||||||||||    
T  35001524 taaaatagagagaaaaaga 35001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 4468592 - 4468372
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  4468592 aacaacgctgcacaagacgacgaataacaaaccaccacacttatatgatgaaatcacaaagaa-aaaacctagatctatatgaaaatcacttatttagat 4468494  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagaga 200  Q
    |||||||||||||| ||||| |||| |  ||| |||| |||||||||||||| |||| |        ||||||||| | | || ||||||||||||| ||    
T  4468493 tgaaatagagagaacaagatgaagaggggtgacttcatgtcaagaattgacccaaaatc-------gtgaagaaactgtaagaaaaaacctagagagtga 4468401  T
Q  201 aaattagggccgacttgttggagagggag 229  Q
    ||| ||| |||| ||||||||| ||||||    
T  4468400 aaactagagccggcttgttggatagggag 4468372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 9 - 221
Target Start/End: Complemental strand, 34489276 - 34489061
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtg-aaagtcacttatt--tagattgaaa 105  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||| ||||| |||||||||||||||||| ||| |||||||||  || ||||||     
T  34489276 cgcacaagacgacgaacaacacaccaccacactcggatgatgaaatcacgaagaa-aaaacctagatctatgtgaaaaatcacttatttatatattgaat 34489178  T
Q  106 tagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaat 204  Q
    ||||||||||||||| |||| |  |||||| | ||||| |||||| | ||||||||||| ||   ||||||  | | ||||||||||||||||| ||||     
T  34489177 tagagagaaaaagatgaagaggggtgattttaagtcaaaaattgatcaaaaaccacccctcatccaagaaaatgaaagagaaaacctagagagaaaaaac 34489078  T
Q  205 tagggccgacttgttgg 221  Q
    ||||| |||||||||||    
T  34489077 tagggtcgacttgttgg 34489061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 33543663 - 33543839
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtg-aaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||| ||||||| | | |||||| |||||||| ||||  ||||| || ||||||||| ||| | |||||||||||    
T  33543663 aacaacgccgcacaagacgacgaacaacacaccaccataatcagatgacgaaatcacgaaga--aaaacttaaatctatgtgaaaaattacttatttaga 33543760  T
Q  100 ttgaaatagagagaaaaagat-aaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaac 176  Q
    |||||||| |||||||||||| |||||||| |||||||||||||| || ||||  ||||||||||| ||| ||||||||    
T  33543761 ttgaaatatagagaaaaagatgaaagatgagtgatttcaggtcaaaaactgactcaaaaccacccctcaacgaagaaac 33543839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 25337597 - 25337499
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    |||| ||||||||||||||||| |||||||||||  ||||| |||||||| ||||| ||||||||||| ||||||||| ||| ||||||||||||||||    
T  25337597 ccgcgcaagacgacgaacaacacaccaccacactcggatgacgaaatcacgaagaaaaaaacctagatttatgtgaaaatcatttatttagattgaaat 25337499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 28635175 - 28635327
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag--tcacttatttagattgaaataga 109  Q
    |||||||||||||||||||||| ||||||| | |||| ||||||||  |||| ||||| ||||||||||| ||||  ||||||||||| ||||||||| |    
T  28635175 acaagacgacgaacaacaaaccgccacactcaaatgacgaaatcacgtagaa-aaaacttagatctatgtaaaagaatcacttatttaaattgaaataaa 28635273  T
Q  110 gagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc 163  Q
     ||||||| || |||| | ||||||| ||||||| ||||| || |||| |||||    
T  28635274 aagaaaaatatgaagagggatgatttgaggtcaaaaattgtcccaaaatcaccc 28635327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 25398540 - 25398451
Alignment:
Q  61 gaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattga 150  Q
    |||||||||||||||||| || ||| ||||||||||||||||| | | ||| |||||||| |||||||| |||||| |||||| ||||||    
T  25398540 gaagaaaacctagatctacgttaaaatcacttatttagattgagacaaagataaaaagatgaagatgaacgatttcgggtcaaaaattga 25398451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 7027857 - 7027811
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcaca 58  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||    
T  7027857 acaagacgacgaacaacaaaccaccacacttaaatgatgaaatcaca 7027811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 140
Target Start/End: Original strand, 4352052 - 4352183
Alignment:
Q  14 aagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaag----aaaacctagatctatgtgaaagtcacttatttagattgaaataga 109  Q
    |||||||||||||||| | |||||||||  ||||| |||||||| ||||||    |||| ||| |||||| ||||| |||||||||| ||||||||| ||    
T  4352052 aagacgacgaacaacacatcaccacactcggatgacgaaatcacgaagaagacaaaaaaactaaatctatatgaaaatcacttatttggattgaaattga 4352151  T
Q  110 -gagaaaaagataaagatgaatgatttcaggt 140  Q
      ||||||| || ||||||  |||||||||||    
T  4352152 ctagaaaaatatgaagatgggtgatttcaggt 4352183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 3108508 - 3108468
Alignment:
Q  94 tttagattgaaatagagagaaaaagataaagatgaatgatt 134  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  3108508 tttagattgaaatagagagaaaaagataaagatgagtgatt 3108468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 13436751 - 13436705
Alignment:
Q  71 tagatctatgtgaaagtcacttatttagattgaaatagagagaaaaa 117  Q
    ||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  13436751 tagatttatgtgaaaatcacttatttaaattgaaatagagagaaaaa 13436705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 8520878 - 8520931
Alignment:
Q  166 aatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgtt 219  Q
    |||||||||||  || ||||||||||||| |||||||| |||||||||||||||    
T  8520878 aatgaagaaactcgaagagaaaacctagaaagagaaaactagggccgacttgtt 8520931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 125
Target Start/End: Complemental strand, 8266583 - 8266545
Alignment:
Q  87 tcacttatttagattgaaatagagagaaaaagataaaga 125  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  8266583 tcacttatttagattgaagtagagagaaaaagatgaaga 8266545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 23128631 - 23128577
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||| ||||||||||||||||||| | | || |||||||| ||||||||||||||    
T  23128631 cgccacacaagacgacgaacaacacaacgccgcacttagacgatgaaatcacaaa 23128577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 32059922 - 32059868
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | |  |||||||||| || |||||||||||    
T  32059922 cgccgcacaagacgacgaacaacacaacgtcacacttagacgaagaaatcacaaa 32059868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 32327294 - 32327348
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || ||||||||  |||||||||||||    
T  32327294 cgccgcacaagacgacgaacaacacaacgccgcacttagactatgaaatcacaaa 32327348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 33053245 - 33053299
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  33053245 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 33053299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 60
Target Start/End: Complemental strand, 34018568 - 34018519
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||||||||||| | | ||||||||||| || |||||||||||    
T  34018568 cacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaa 34018519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 5582759 - 5582819
Alignment:
Q  65 aaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaaga 125  Q
    ||||| ||||||||| ||||| ||| ||||||||||| ||||| | |||||||||| ||||    
T  5582759 aaaacttagatctatttgaaaatcatttatttagattaaaatataaagaaaaagatgaaga 5582819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 14801838 - 14801810
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaaca 29  Q
    |||||||||||||||||||||||||||||    
T  14801838 aacagcgccgcacaagacgacgaacaaca 14801810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 173; Significance: 8e-93; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 19280988 - 19281223
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||    
T  19280988 aacaacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacctagatatgtgtgaaagtcacttatttagat 19281086  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| ||||||  ||||||| |||||| |||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  19281087 tgaaatagagagaaaaagatgaagatgggtgatttccggtcaaaaatttacccaaaaccaccccccaatgaagaaacgggatgagaaaacctagagagag 19281186  T
Q  200 aaaattagggccgacttgttggagagggaggggaaga 236  Q
    |||||||||||||||||||||||||||||| ||||||    
T  19281187 aaaattagggccgacttgttggagagggagaggaaga 19281223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 6 - 219
Target Start/End: Complemental strand, 7246990 - 7246776
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7246990 cgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaa 7246891  T
Q  106 tagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac-ccccaatgaagaaacgggatgagaaaacctagagagagaaaat 204  Q
    ||||||||||||||| |||| |  || |||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  7246890 tagagagaaaaagatgaagaggggtggtttcaggttaagaattgacccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagagaaaat 7246791  T
Q  205 tagggccgacttgtt 219  Q
    |||||||| ||||||    
T  7246790 tagggccggcttgtt 7246776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 6 - 219
Target Start/End: Complemental strand, 7241814 - 7241600
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7241814 cgccgcacaagacgacgaacaacaaatcaccacaattagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaa 7241715  T
Q  106 tagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac-ccccaatgaagaaacgggatgagaaaacctagagagagaaaat 204  Q
    ||||||||||||||| |||| |  || |||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  7241714 tagagagaaaaagatgaagaggggtggtttcaggttaagaattgacccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagagaaaat 7241615  T
Q  205 tagggccgacttgtt 219  Q
    |||||||| ||||||    
T  7241614 tagggccggcttgtt 7241600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 27266902 - 27267125
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttaga 99  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  27266902 aacagtgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttaga 27267001  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||||||||||||| || |||| |  ||||||||||||||||||||||| ||||||||||  |  ||||||||||||| |||||||||||||||||    
T  27267002 ttgaaatagagagaaaaatatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccttcggtgaagaaacgggaagagaaaacctagagaga 27267101  T
Q  199 gaaaattagggccgacttgttgga 222  Q
    ||||| ||||||||||||||||||    
T  27267102 gaaaactagggccgacttgttgga 27267125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 7150378 - 7150586
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  7150378 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaagcacaaagaaaaaaacttagatctatgtgaaagtcacttatttagat 7150477  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||| |  |||||||||||||| |||| | | ||||||| |||| ||||||||||||||| ||||||||||||||||||    
T  7150478 tgaaatagagagaaaaagatgaagaggggtgatttcaggtcaaaaattaatccaaaaccatccccgaatgaagaaacgggaagagaaaacctagagagag 7150577  T
Q  200 aaaattagg 208  Q
    |||| ||||    
T  7150578 aaaactagg 7150586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 11 - 211
Target Start/End: Original strand, 18677518 - 18677720
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttagattgaaataga 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| |||||||    
T  18677518 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattaaaataga 18677617  T
Q  110 gagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagg 208  Q
    ||||||||||| |||| | |||||||||| |||| |||||||| ||||||||||| |||||||||||||| |  ||||||||||||| ||||||||||||    
T  18677618 gagaaaaagatgaagagggatgatttcagatcaataattgacccaaaaccacccctcaatgaagaaacggtaaaagaaaacctagagggagaaaattagg 18677717  T
Q  209 gcc 211  Q
    |||    
T  18677718 gcc 18677720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 30371762 - 30371532
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |||||||||||||    
T  30371762 aacaacgccgcacaagatgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttaga 30371663  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| |||||||||||| |||| |  ||||||||||||||  ||||||| ||||||||||| |||||||||||  | | ||||||||||||| |||    
T  30371662 ttgaaataaagagaaaaagatgaagaggggtgatttcaggtcaaatattgacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagataga 30371563  T
Q  199 gaaaattagggccgacttgttggagagggag 229  Q
    ||||| |||||||||||||||||||||||||    
T  30371562 gaaaactagggccgacttgttggagagggag 30371532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 12 - 234
Target Start/End: Original strand, 7886992 - 7887214
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||| ||||||||| ||||||||||||||| |||||||||    
T  7886992 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaagaa-aaaacatagatttatgtgaaaatcacttatttagattaaaatagaga 7887090  T
Q  112 gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggc 210  Q
    | ||||||  |||| | ||||||||||||||||||| |||| ||||||||||| | |||||||||| ||| |||||||  |||| |||||||| ||||||    
T  7887091 ggaaaagacgaagagggatgatttcaggtcaagaatggacccaaaaccacccctcgatgaagaaactggaagagaaaagttagaaagagaaaactagggc 7887190  T
Q  211 cgacttgttggagagggaggggaa 234  Q
    || |||||||||||||||||||||    
T  7887191 cggcttgttggagagggaggggaa 7887214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 36344534 - 36344757
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||| | ||||||||||||    
T  36344534 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgat-aaatcacaaagaa-aaaacttagatccatgtgaaaataacttatttagat 36344631  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||||||| |||| |  |||||| ||||||||||| |||  ||||||||||| |||||||||||  ||| ||||||| |||||||||     
T  36344632 tgaaatatagagaaaaagatgaagaggggtgattttaggtcaagaatcgactcaaaaccacccctcaatgaagaaattggaagagaaaatctagagagaa 36344731  T
Q  200 aaaattagggccgacttgttggagag 225  Q
    ||||||||||||||||||||||||||    
T  36344732 aaaattagggccgacttgttggagag 36344757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 34881754 - 34881518
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac--------ctagatctatgtgaaagtcactt 92  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||         |||||||||||||||| ||||||    
T  34881754 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaagaaaaaaactagatctatgtgaaaatcactt 34881655  T
Q  93 atttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacct 191  Q
    |||||||||||||||||||| ||||||| ||||    ||||||||||||||||||||||| | ||||||||| ||||| |||||| | | ||||||||||    
T  34881654 atttagattgaaatagagag-aaaagatgaagagaggtgatttcaggtcaagaattgacccagaaccacccctcaatggagaaactgtaagagaaaacct 34881556  T
Q  192 agagagagaaaattagggccgacttgttggagagggag 229  Q
     ||||||||||| |||||||||||||||||||||||||    
T  34881555 ggagagagaaaactagggccgacttgttggagagggag 34881518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 9 - 234
Target Start/End: Complemental strand, 26578280 - 26578053
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||| |||||||| ||||  ||||||||||||||||| ||||||||||||||||||||    
T  26578280 cgcacaagacgacgaacaacaaatcactacatttagatgatgaaattacaaagaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaat 26578181  T
Q  107 agagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagagaaaatt 205  Q
    | |||||||||||| ||||||| ||||||||||||||||||||||| ||||||| ||  |||| ||||||  | | ||||||| || ||||||||||| |    
T  26578180 aaagagaaaaagatgaagatgagtgatttcaggtcaagaattgaccaaaaaccatccatcaataaagaaattgtaagagaaaatctggagagagaaaact 26578081  T
Q  206 agggccgacttgttggagagggaggggaa 234  Q
    |||| || |||||||||||||||| ||||    
T  26578080 agggtcg-cttgttggagagggagtggaa 26578053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 8 - 234
Target Start/End: Original strand, 43261869 - 43262094
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  43261869 ccgcataagacgacgaacaacaaaccaccacacttagatgataaaatcacaaag--gaaaacctagatctatgtgaaaatcacttatttagattgaaata 43261966  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
    |||| |||||||| ||||||  ||||||||||| ||||||||||  |||| |||| | ||||||| |||  |   | |||||||||||||||||||| ||    
T  43261967 gagataaaaagatgaagatgggtgatttcaggttaagaattgactcaaaatcacctctcaatgaaaaaattgatagtgaaaacctagagagagaaaacta 43262066  T
Q  207 gggccgacttgttggagagggaggggaa 234  Q
    || ||| |||||| ||||||||| ||||    
T  43262067 ggaccggcttgttagagagggagaggaa 43262094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 16981320 - 16981138
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||| || ||||||||||||||||||||    
T  16981320 gccgcacaagacgacgaacaacaaaccaccgcacttagatgatgaaatcacaaagaa-aaaacctagatatatgtgtaaatcacttatttagattgaaat 16981222  T
Q  107 agagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaac 189  Q
    ||||||||||| || |||| || ||||||||||||||||||||| | || |||||||| |||||||||||  ||| ||||||||    
T  16981221 agagagaaaaatatgaagaggagtgatttcaggtcaagaattgatccaataccacccctcaatgaagaaaatggaagagaaaac 16981138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 8 - 229
Target Start/End: Original strand, 19259861 - 19260080
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtg-aaagtcacttatttagattgaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||| ||| |||||||||||||||||||    
T  19259861 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacagagaaaaaaaacttagatctatgtgaaaaatcacttatttagattgaaa 19259960  T
Q  106 tagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaat 204  Q
    |||||||||||||   ||   |  ||||||||||||||||||||||| ||||||||||| ||| |||||||| | | ||||||||||  |||||||||||    
T  19259961 tagagagaaaaag---aattggggtgatttcaggtcaagaattgacccaaaaccacccctcaacgaagaaaccgtaagagaaaacct--agagagaaaat 19260055  T
Q  205 tagggccgacttgttggagagggag 229  Q
    |||||||| |||||||||| |||||    
T  19260056 tagggccggcttgttggagtgggag 19260080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 7 - 218
Target Start/End: Original strand, 21060331 - 21060542
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  21060331 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgacatcacgaagaa-aaaacctacatctatgtgaaaatcacttatttagattgaaat 21060429  T
Q  107 agagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagagagaaaatt 205  Q
    | |||||||||||| ||||    ||||||||| ||||||||||||| ||||||||| | | ||||| || |  || |||||||||||||||||||||| |    
T  21060430 atagagaaaaagatgaagagtggtgatttcagatcaagaattgacccaaaaccaccactcgatgaaaaatctagaagagaaaacctagagagagaaaact 21060529  T
Q  206 agggccgacttgt 218  Q
    |||| || |||||    
T  21060530 agggtcgccttgt 21060542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 781425 - 781264
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    ||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||    
T  781425 aacagtgccgcacatgacgacgaacaacaaaccaccatacttagatgatgaaatcacaaagaa-aaaccctagatctatctgaaaatcacttatttagat 781327  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc 163  Q
    ||||||| |||||||||||| ||||||  ||||||||||||||||||||| | ||||||||||    
T  781326 tgaaatatagagaaaaagatgaagatgggtgatttcaggtcaagaattgaaccaaaaccaccc 781264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 43148760 - 43148607
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| || |||||||||||||||||||||||| ||||||    
T  43148760 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaatctaaatatatgtgaaagtcacttatttagatcgaaata 43148661  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac 161  Q
    ||||||||| ||| || |||||| |||| | |||||||||||||| ||||||||    
T  43148660 gagagaaaaggatgaaaatgaataattttaagtcaagaattgacccaaaaccac 43148607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 28235621 - 28235427
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  28235621 aacaacgccgcacaagacgacagacaacaaaccatcacacttagatgatgaaatcacaaagaa-aaaatctagatctatgtgaaaatcacttatttagat 28235523  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagag 195  Q
     |||||||| |||||||||| |||| |  ||||||||||||||  ||||||| ||||||||||| |||| ||||||| ||| ||||||| ||||||    
T  28235522 cgaaatagaaagaaaaagatgaagaggggtgatttcaggtcaatgattgacccaaaaccacccctcaataaagaaactggaagagaaaatctagag 28235427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 2057881 - 2058027
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  2057881 aacaacgccgcgcaagacgacgaacaacaaaccaccacacttagatgatgaaatcataaagaaaaaaacctagatctatgtgaaaatcacttatttagat 2057980  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaat 147  Q
    ||||||| |||||||||||| |||| |  |||||| |||||||||||    
T  2057981 tgaaataaagagaaaaagatgaagaggggtgattttaggtcaagaat 2058027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 3271445 - 3271663
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaa------acctagatctatgtgaaagtcacttat 94  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||      |  |||| |||||||||| ||||||||    
T  3271445 aacaacgctgcacaagacgacgaataacaaaccaccacacttagatgatgaaatcacaaagaaaaaacaaaaaaattagacctatgtgaaaatcacttat 3271544  T
Q  95 ttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctaga 194  Q
    ||||||||||| |||||||||| ||| |||| || |||||||| ||||||||||||||||||| ||||| ||||||||||||   | || ||||  ||||    
T  3271545 ttagattgaaacagagagaaaa-gatgaagaggagtgatttcatgtcaagaattgacctaaaatcaccctcaatgaagaaactataagaaaaaatttaga 3271643  T
Q  195 gagagaaaattagggccgac 214  Q
    ||||||||||||||||||||    
T  3271644 gagagaaaattagggccgac 3271663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 42579916 - 42579685
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaa-------acctagatctatgtgaaagtcacttatttagatt 101  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||       ||||| |||||||||||| |||||||||||||||    
T  42579916 cgcacaagacgacgaacaacaaatcaccacacttagatgatgaaatcacaaagaaaaaacaaaaaaacctaaatctatgtgaaaatcacttatttagatt 42579817  T
Q  102 gaaatagagagaaaaagataaagatgaa---tgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    |||||||| ||||||| | || ||  |    |||||||| ||||| |||||||| ||||||||||| ||||| |||||| | | ||||||||||||||||    
T  42579816 gaaatagaaagaaaaaaaaaatgaaaaggggtgatttcatgtcaataattgacccaaaaccacccctcaatggagaaactgtaagagaaaacctagagag 42579717  T
Q  198 agaaaattagggccgacttgttggagagggag 229  Q
    |||||| |||||| | ||||||||||||||||    
T  42579716 agaaaactagggcgggcttgttggagagggag 42579685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 30298244 - 30298130
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  30298244 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcataaagaa-aaaacctagatctatgtgaaaatcacttatttagat 30298146  T
Q  101 tgaaatagagagaaaa 116  Q
    ||||||| ||||||||    
T  30298145 tgaaatatagagaaaa 30298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 41184483 - 41184712
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaa---------acctagatctatgtgaaagtcact 91  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||| |        
T  41184483 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaacaaaaaaaaacctagatctatgtgaaaat---- 41184578  T
Q  92 tatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacc 190  Q
    ||||||||||||||||||||||||| ||| ||||    |||||||| ||||| |||||||| |||| || ||| ||||| |||||| | | |||||||||    
T  41184579 tatttagattgaaatagagagaaaa-gatgaagaatggtgatttcatgtcaaaaattgacccaaaatcatccctcaatggagaaactgtaagagaaaacc 41184677  T
Q  191 tagagagagaaaattagggccgacttgttggagag 225  Q
    |||||| ||||||||||||||| ||||||||||||    
T  41184678 tagagaaagaaaattagggccggcttgttggagag 41184712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 4 - 235
Target Start/End: Complemental strand, 27751959 - 27751716
Alignment:
Q  4 agcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattga 103  Q
    |||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  27751959 agcgccccaaaaggcgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaatcacttatttatattga 27751861  T
Q  104 aatagagaga-----aaaagataaagatgaa-------tgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacc 190  Q
    |||| ||| |     |||| | |||||||||       ||||||||||||||||||||||| ||||||||||| ||||| | ||    || |||||||||    
T  27751860 aatatagaaagaaagaaaaaaaaaagatgaagaggaggtgatttcaggtcaagaattgacccaaaaccacccctcaatggaaaattaagaagagaaaacc 27751761  T
Q  191 tagagagagaaaattagggccgacttgttggagagggaggggaag 235  Q
    || |||| ||||| |||||||| |||| |||||||||| ||||||    
T  27751760 tatagagggaaaactagggccggcttgctggagagggaagggaag 27751716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 35475380 - 35475542
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||||||||| || |||||||||||||||||||||||| || ||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  35475380 aacagcgccgcataaaacgacgaacaacaaaccaccacacgtaaatgatgaaatcacaaagaa-aaaatctagatctatgtgaaaatcacttatttagat 35475478  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    ||||||| ||| || ||||| ||||    ||||||||| ||||||||| ||| |||| ||||||    
T  35475479 tgaaatatagataacaagatgaagagaggtgatttcagatcaagaattaacccaaaatcacccc 35475542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 12 - 198
Target Start/End: Complemental strand, 11767834 - 11767645
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttagattgaaatagag 110  Q
    |||||||||||||||||| ||||||||||| |||||  || ||||| ||||| ||||| || ||||| ||||||  ||||||||||||||||||||| ||    
T  11767834 acaagacgacgaacaacacaccaccacactcagatggcgacatcacgaagaaaaaaacatatatctacgtgaaaaatcacttatttagattgaaatatag 11767735  T
Q  111 agaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaac-gggatgagaaaacctagagaga 198  Q
    |||||||||| ||||   ||||||| ||||||| |||||||||||||||||| | ||||||||||||  ||| ||||||||||| |||||    
T  11767734 agaaaaagatgaagacagatgattttaggtcaaaaattgacctaaaaccaccacacaatgaagaaacttggaagagaaaacctaaagaga 11767645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 212
Target Start/End: Original strand, 20257745 - 20257948
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    |||||||||||||||||||||  |  ||||||| |||||   |||| |  ||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  20257745 cgcacaagacgacgaacaacacgctgccacactcagatggcaaaataatgaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatag 20257844  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattag 207  Q
    |||||||||||   ||||| ||||||||||||||| |||||||| ||||| ||||| | ||||| | ||  || |||||||| ||| |||| ||||||||    
T  20257845 agagaaaaagaagtagatggatgatttcaggtcaaaaattgaccaaaaactacccctcgatgaaaacactagaagagaaaacttagggaga-aaaattag 20257943  T
Q  208 ggccg 212  Q
    |||||    
T  20257944 ggccg 20257948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 10649434 - 10649317
Alignment:
Q  57 caaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaa 156  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| |  ||||||||||||||||||||||| |||    
T  10649434 caaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaa 10649335  T
Q  157 accacccc-caatgaaga 173  Q
    | |||||| |||||||||    
T  10649334 atcacccctcaatgaaga 10649317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 42886514 - 42886392
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||  |||||||| ||||||||||||  ||||||||| |||    
T  42886514 aacaacgccgcacaagacgacgaacaacacaccaccacactcagatgatgaaatcacgaaga--aaaacctaaatctatgtgaaaagcacttattttgat 42886417  T
Q  101 tgaaatagagagaaaaagataaaga 125  Q
    |||||||||||||||| ||| ||||    
T  42886416 tgaaatagagagaaaaggatgaaga 42886392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 15570939 - 15570804
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtg-aaagtcacttatttagattgaaat 106  Q
    ||||| |||||||||||||||| |||||||||||  | ||| |||||||||||||| |||||||| ||||||||| ||| |||  ||||||||||||| |    
T  15570939 ccgcataagacgacgaacaacacaccaccacactcgggtgacgaaatcacaaagaa-aaaacctacatctatgtgaaaaatcaaatatttagattgaatt 15570841  T
Q  107 agagagaaaaagataaagatgaatgatttcaggtcaa 143  Q
    | |||||||||||| |||| | ||||||||| |||||    
T  15570840 atagagaaaaagatgaagagggatgatttcaagtcaa 15570804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 27576401 - 27576516
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    ||||||||  || |||||||| ||||||||||| | |||| |||||||||||||| |||| |||||||||||||||  ||||||||||| ||||||||||    
T  27576401 cgcacaagtagaagaacaacataccaccacactcatatgacgaaatcacaaagaa-aaaatctagatctatgtgaatatcacttatttacattgaaatag 27576499  T
Q  109 agagaaaaagataaaga 125  Q
    |||||||| ||| ||||    
T  27576500 agagaaaaggatgaaga 27576516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 7613110 - 7613214
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaataga 109  Q
    |||||||||||||||||||| ||||||||||| ||||||  ||||||  |||||  |||||||||||||| |||||  |||||||||||||||||| |||    
T  7613110 gcacaagacgacgaacaacacaccaccacactcagatgacaaaatcatgaagaa--aaacctagatctatatgaaaaacacttatttagattgaaacaga 7613207  T
Q  110 gagaaaa 116  Q
    |||||||    
T  7613208 gagaaaa 7613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 225
Target Start/End: Complemental strand, 11192392 - 11192178
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 111  Q
    |||||||||| ||||||| | ||||||||| | | || ||| |||| ||| | ||||| |||||||  |||||| |||||||||||| |||| |||||||    
T  11192392 acaagacgacaaacaacacaacaccacactcaaacgacgaactcacgaaggaaaaaacttagatctgcgtgaaaatcacttatttag-ttgatatagaga 11192294  T
Q  112 gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagagagaaaattaggg 209  Q
     |||||||| || ||   |||||||||||||| |||||||| |||||||||||  |||||| || |   || |||| || ||||||| ||| || ||||     
T  11192293 caaaaagattaatataggtgatttcaggtcaaaaattgacccaaaaccaccccttcaatgatgagaatagaagagagaaactagagaaagagaactagga 11192194  T
Q  210 ccgacttgttggagag 225  Q
    ||||||||||||||||    
T  11192193 ccgacttgttggagag 11192178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 42432887 - 42432813
Alignment:
Q  50 gaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaaga 125  Q
    |||||||||||||| |||||||| |||||| ||||| |||||| |||||||||||||||||||||||| |||||||    
T  42432887 gaaatcacaaagaa-aaaacctaaatctatatgaaattcacttttttagattgaaatagagagaaaaatataaaga 42432813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 1696923 - 1697021
Alignment:
Q  15 agacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaga 113  Q
    |||| ||||||||||   || |||||||||| || || ||||||||||| ||||  ||||||||||||||| |||||||||||||||||||||| ||||    
T  1696923 agacaacgaacaacatgacatcacacttagacgaagagatcacaaagaataaaatatagatctatgtgaaaatcacttatttagattgaaatagtgaga 1697021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 14082450 - 14082556
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaa-----agaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    ||||| |||||||||||||||||| | | ||||||||||| |||||||||||||     | ||||||| || ||| |||||||||| |||||||||||||    
T  14082450 cgccgtacaagacgacgaacaacacaacgccacacttagacgatgaaatcacaaaaaatataagaaaaacttgatatatgtgaaagccacttatttagat 14082549  T
Q  101 tgaaata 107  Q
    |||||||    
T  14082550 tgaaata 14082556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 10649680 - 10649621
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa 63  Q
    |||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  10649680 aacaacgccgcacaagacgacgaacaacaaa---ccacacttagatgatgaaatcacaaagaa 10649621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 130 - 212
Target Start/End: Complemental strand, 4953990 - 4953905
Alignment:
Q  130 tgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgg---gatgagaaaacctagagagagaaaattagggccg 212  Q
    ||||| || |||||||||||||| |||||||||||||||||| ||||||   ||  ||||||||||||||||||||||||| ||||    
T  4953990 tgattccaagtcaagaattgacccaaaaccacccccaatgaaaaaacggaaagagaagaaaacctagagagagaaaattagagccg 4953905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 164
Target Start/End: Complemental strand, 6445923 - 6445810
Alignment:
Q  50 gaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattg 149  Q
    |||||||| ||||| ||||||||||||||||| ||| ||||||||||| ||| | |||||||||||| ||| ||||||  |||||| | || || |||||    
T  6445923 gaaatcacgaagaa-aaaacctagatctatgtaaaaatcacttatttaaattaagatagagagaaaacgatgaagatgggtgattttaagttaaaaattg 6445825  T
Q  150 acctaaaaccacccc 164  Q
    ||  |||||||||||    
T  6445824 actcaaaaccacccc 6445810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 19983398 - 19983516
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaga-aaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| ||||||||||| |||||||||||| | | ||||||| | |||| |||||||||||||| | || |||| |||||||| ||| |||| ||||||||    
T  19983398 aacaacgccgcacaaggcgacgaacaacacagcgccacactcatatgacgaaatcacaaagaaaataaccctaaatctatgtcaaaatcacgtatttaga 19983497  T
Q  100 -ttgaaatagagagaaaaa 117  Q
     |||||||||| |||||||    
T  19983498 tttgaaatagaaagaaaaa 19983516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14211236 - 14211076
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||| |    | |||| ||| || |||||||| ||  | |||| || ||| ||||||||| ||||||||||||||    
T  14211236 aacaacgccgcacaagacgacgaacaacacaatgtcgcactaagacgacgaaatcacgaa--ataaaaacttgatgtatgtgaaaatcacttatttagat 14211139  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc 163  Q
    ||||| | || |||||||||  ||| |  |||||  ||||||| ||||||||||||| |||||    
T  14211138 tgaaagaaagggaaaaagatgcagaggggtgattctaggtcaaaaattgacctaaaatcaccc 14211076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 165
Target Start/End: Complemental strand, 28097140 - 28097026
Alignment:
Q  50 gaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattg 149  Q
    |||||||  ||||| | |||||| || ||||||||| ||||||||||| |||||||| ||| | ||||||| ||||||  ||| |||||||||| |||||    
T  28097140 gaaatcatgaagaaaataacctaaatttatgtgaaaatcacttatttatattgaaattgagcg-aaaagatgaagatgggtgaattcaggtcaaaaattg 28097042  T
Q  150 acctaaaaccaccccc 165  Q
    ||  ||||||||||||    
T  28097041 acacaaaaccaccccc 28097026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 6012215 - 6012269
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | |||| |||||||| ||||||||||||||    
T  6012215 cgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcacaaa 6012269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 19100721 - 19100800
Alignment:
Q  38 cacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaa 117  Q
    |||||||| ||  ||||||||||||| |||| ||| || ||||  ||| ||||||||||| |||||||||||||||||||    
T  19100721 cacttagacgacaaaatcacaaagaaaaaaatctaaatttatgcaaaaatcacttatttaaattgaaatagagagaaaaa 19100800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 1582166 - 1582280
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||| ||| ||| | |  | |||| | | |||||||||||  |||  |||| ||||||||| |||||| ||||||||||||||    
T  1582166 aacaacgccgcacaagacgacaaacgacacaacgtcgcactcatacgatgaaatcacgtaga--aaaagctagatctacgtgaaaatcacttatttagat 1582263  T
Q  101 tgaaatagagagaaaaa 117  Q
    | |||| ||||||||||    
T  1582264 taaaatggagagaaaaa 1582280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1602649 - 1602535
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||| ||| ||| | |  | |||| | | |||||||||||  |||  |||| ||||||||| |||||| ||||||||||||||    
T  1602649 aacaacgccgcacaagacgacaaacgacacaacgtcgcactcatacgatgaaatcacgtaga--aaaagctagatctacgtgaaaatcacttatttagat 1602552  T
Q  101 tgaaatagagagaaaaa 117  Q
    | |||| ||||||||||    
T  1602551 taaaatggagagaaaaa 1602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 62 - 164
Target Start/End: Original strand, 2979454 - 2979558
Alignment:
Q  62 aagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagag--aaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacc 159  Q
    ||||||| || ||| ||||||||| ||||||||||||||||||| | ||||  ||||||||  ||| |  |||||  ||||||| ||||||||||||| |    
T  2979454 aagaaaaacttgatgtatgtgaaaatcacttatttagattgaaagaaagaggaaaaaagatgcagaggggtgattataggtcaaaaattgacctaaaatc 2979553  T
Q  160 acccc 164  Q
    |||||    
T  2979554 acccc 2979558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 101
Target Start/End: Complemental strand, 13421942 - 13421850
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagatt 101  Q
    |||||||||||||||||||||| | || |||||||||| ||  |||||||||| ||||||| ||  || |||| ||||  ||||||||||||||    
T  13421942 ccgcacaagacgacgaacaacacaacatcacacttagacgaaaaaatcacaaa-aagaaaaactttatatatgggaaaaccacttatttagatt 13421850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 24229866 - 24229915
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||||||||||||| | || ||||||||||| |||||||||||    
T  24229866 cacaagacgacgaacaacaaaacgccgcacttagatgacgaaatcacaaa 24229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 138
Target Start/End: Complemental strand, 3166363 - 3166259
Alignment:
Q  35 ccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgat 133  Q
    ||||||||| |||  |||||||||||| || ||||| ||  ||||||||||| |  |||||||| ||| ||||| ||| |||||||| ||||||| ||||    
T  3166363 ccacacttaaatgccgaaatcacaaagtaaaaaaacttaagtctatgtgaaaattgcttatttatatttaaataaagataaaaagatgaagatgagtgat 3166264  T
Q  134 ttcag 138  Q
    |||||    
T  3166263 ttcag 3166259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 164
Target Start/End: Complemental strand, 7036160 - 7036070
Alignment:
Q  77 tatgtgaaagtcacttatttagattgaaata---gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    |||||||||  |||||||||||||||||| |   |||  ||||||||  |||||| |||||| ||||||| || |||||||||||||||||    
T  7036160 tatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagatgagtgattttaggtcaaaaaatgacctaaaaccacccc 7036070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 14726541 - 14726592
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||||||||||||| | |||| |||||||| || |||||||||||    
T  14726541 cgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaa 14726592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 9113802 - 9113856
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  9113802 cgccgcacaagacgacgaacaacagaacgccgcacttagacgacgaaatcacaaa 9113856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 13007240 - 13007186
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  13007240 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 13007186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 203
Target Start/End: Original strand, 35676224 - 35676321
Alignment:
Q  106 tagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagagagaaaa 203  Q
    ||||||||||||||| |||||| ||||||| |||| || |||||| | ||||||||||  |||||||||||| | | |||||||   ||||||||||||    
T  35676224 tagagagaaaaagatgaagatg-atgattttaggttaaaaattgatccaaaaccacccttcaatgaagaaacagtaagagaaaattcagagagagaaaa 35676321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 38597808 - 38597754
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  38597808 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 38597754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 10148766 - 10148730
Alignment:
Q  70 ctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  10148766 ctagatctatgtgaaaatcacttatttagattaaaat 10148730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 8e-93; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 45128242 - 45128014
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45128242 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagat 45128143  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagaga 200  Q
    ||||||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||||||||||    
T  45128142 tgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccctcaatgaagaaatgggaagagaaaacctagagagaga 45128043  T
Q  201 aaattagggccgacttgttggagagggag 229  Q
    |||||||| ||| ||| ||||||||||||    
T  45128042 aaattaggaccggcttattggagagggag 45128014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 32680640 - 32680826
Alignment:
Q  17 acgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttagattgaaatagagagaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32680640 acgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaa 32680739  T
Q  116 aagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagagaaa 202  Q
    ||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  32680740 aagatgaagatgagtgatttcaggtcaagaatcgaccgaaaaccacccccaatgaagaaacgggaagagaaaacctagagagagaaa 32680826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 34599025 - 34598796
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| ||||||||||||||    
T  34599025 aacaacgccgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcacaaa-aaaaaaaactagatctatgtgaaaatcacttatttagat 34598927  T
Q  101 tgaaatagagagaaaaagataaagatga-atgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||||||||||||||| |||||||  |||||| |||||||||||||| | ||||||||||| ||| |||||||||| | |||||||||||||||||    
T  34598926 tgaaatagagagaaaaagatgaagatgagttgatttgaggtcaagaattgatccaaaaccacccctcaacgaagaaacggtaagagaaaacctagagaga 34598827  T
Q  199 gaaaattagggccgacttgttggagagggag 229  Q
    |||||||||||||| ||||||||||||||||    
T  34598826 gaaaattagggccggcttgttggagagggag 34598796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 2808515 - 2808742
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||     
T  2808515 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa--aaacctagatctatgtgaaaatcacttatttagac 2808612  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||||||||||| |||| |||| |  ||||||||||||||||||||||| ||||||||||| |||||||||||  | | || |||||||||| | ||    
T  2808613 tgaaatagagagaaatagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaaatgaaagaaaaaacctagaaaaag 2808712  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    |||||||||||||||||| |||||||||||    
T  2808713 aaaattagggccgacttgatggagagggag 2808742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 6173670 - 6173445
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  6173670 aacaacgccacacaagacaacgaacaacaaaccaccacacttcgatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagat 6173571  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||| |  |||||||||||||||||| |||| ||||||||||| |||||||||||| | |  |||||||||||||||||    
T  6173570 tgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaatagaccgaaaaccacccctcaatgaagaaaccgtaaaagaaaacctagagagag 6173471  T
Q  200 aaaattagggccgacttgttggagag 225  Q
    |||| ||||| || ||||||||||||    
T  6173470 aaaactagggtcggcttgttggagag 6173445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 20047125 - 20047348
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||||||||||||||    
T  20047125 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaatgaaaaaaacctaaatctatgtaaaagtcacttatttagat 20047224  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||| |||||||||||||| || | |  ||||||||||||||||||||| | ||||| | |||||||||||||||||| | ||||||||||||||||||    
T  20047225 tgaaaaagagagaaaaagatgaata-gggtgatttcaggtcaagaattgatccaaaactaccccccaatgaagaaacggtaagagaaaacctagagagag 20047323  T
Q  200 aaaattagggccgacttgttggaga 224  Q
    ||||||| ||||| |||||||||||    
T  20047324 aaaattatggccgtcttgttggaga 20047348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 36234046 - 36233813
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac---ctagatctatgtgaaagtcacttattta 97  Q
    |||| |||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| ||||    |||||||||||||||| |||||||||||    
T  36234046 aacaacgccgcacaagacgacgaacaaaaaatcaccacacttagatgatgaaattacaaagaaaaaaaaaatctagatctatgtgaaaatcacttattta 36233947  T
Q  98 gattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagaga 196  Q
    |||||||||| |||||||||||| |||| |  ||||||||||||| ||||||||| ||||||||||| |||||||||||  | | ||||||| |||||||    
T  36233946 gattgaaataaagagaaaaagatgaagaggggtgatttcaggtcatgaattgacccaaaaccacccctcaatgaagaaattgcaagagaaaatctagaga 36233847  T
Q  197 gagaaaattagggccgacttgttggagagggagg 230  Q
    ||||||| ||||||||||||||||||||||||||    
T  36233846 gagaaaactagggccgacttgttggagagggagg 36233813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 21570460 - 21570676
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttagattgaaataga 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||||||||||||||| ||||||||||||||||||||| |    
T  21570460 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaatata 21570559  T
Q  110 gagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagagagaaaattagg 208  Q
    ||||||||||| |||| |  ||||||||||||||||||||||| ||||||||| | ||||||| || | ||| ||||||||||||||| |||||| ||||    
T  21570560 gagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccactcaatgaaaaatctggaagagaaaacctagagacagaaaactagg 21570659  T
Q  209 gccgacttgttggagag 225  Q
    |||| ||||||||||||    
T  21570660 gccgccttgttggagag 21570676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 9986385 - 9986612
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaga---aaacctagatctatgtgaaagtcacttattta 97  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   |||||||||||||||||||| |||||||||||    
T  9986385 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaataaacctagatctatgtgaaaatcacttattta 9986484  T
Q  98 gattgaaatagagagaaaaaga--taaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctaga 194  Q
    ||||||| |||||| ||||| |  | |||| | |||||||||||||||||||||||| ||||||||||| |||||||||||| | | |||||||||||||    
T  9986485 gattgaattagagataaaaaaaattgaagagggatgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagagaaaacctaga 9986584  T
Q  195 gagagaaaattagggccgacttgttgga 222  Q
    ||||||||| ||||| || ||| |||||    
T  9986585 gagagaaaactagggtcggcttattgga 9986612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 30420716 - 30420486
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |||||||||||||    
T  30420716 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttaga 30420617  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| |||||||||||| |||| |  |||||||||||||| |||||| | ||||||||||| |||||||||||  | |  | ||||||||||||||    
T  30420616 ttgaaataaagagaaaaagatgaagaggggtgatttcaggtcaaaaattgatccaaaaccacccctcaatgaagaaattgtaaaaaaaaacctagagaga 30420517  T
Q  199 gaaaattagggccgacttgttggagagggag 229  Q
    ||| | |||||||| ||||||||||||||||    
T  30420516 gaagactagggccggcttgttggagagggag 30420486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 3270272 - 3270500
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||||||    
T  3270272 aacaacgccccacaaaacgacgaacaacaagccaccacacttagatgatgaaatcacaaaaaa-aaaacctagatctatgtgaaaatcacttatttagat 3270370  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| | |||||||||| || |||| ||||||||||||||||||||||| ||||||||||| |||||||||||  | | |||||||| ||||||||     
T  3270371 tgaaataaaaagaaaaagatgaaaatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaatcgtaagagaaaacttagagagaa 3270470  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    |||| || |||  |||||||||||||||||    
T  3270471 aaaactaaggctcacttgttggagagggag 3270500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 8971670 - 8971877
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  8971670 aacaacgctgcacaagacgacgaacaacaaaccaccatacttagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaatcacttatttagat 8971768  T
Q  101 tgaaat--agagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    | ||||  |||||||||||||| |||| | |||||||||||||||||||||||| ||||||||||| |||||||||||| | | || |||||||| ||||    
T  8971769 taaaataaagagagaaaaagatgaagagggatgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagaaaaaacctaaagag 8971868  T
Q  198 agaaaatta 206  Q
    |||||||||    
T  8971869 agaaaatta 8971877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 27249194 - 27249421
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||  |||||| |||||||| ||||||||||||||||||||| ||||||||||||||    
T  27249194 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatcttgaaattacaaagaaaaaaacctagatctatgtgaaaatcacttatttagat 27249293  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||||||| |||| |  ||||||||||||||| ||||||| ||||||||||  |||||||||||  | | ||||||||||||||||||    
T  27249294 tgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagtattgacccaaaaccacccttcaatgaagaaattgtaagagaaaacctagagagag 27249393  T
Q  200 aaaattagggccgacttgttggagaggg 227  Q
    |||| ||   ||| ||||||||||||||    
T  27249394 aaaactaaaaccggcttgttggagaggg 27249421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 8 - 214
Target Start/End: Original strand, 40626078 - 40626284
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||||||||||||||||||    
T  40626078 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacgtagatctatgtgaaaatcccttatttagattgaaata 40626176  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
    ||||||||||||  |||| |  |||||||||||||||||| |||| |||| |||||| |||| ||||||  ||| ||||||||||| |||||||||| ||    
T  40626177 gagagaaaaagacgaagaggggtgatttcaggtcaagaatagacccaaaatcacccctcaattaagaaaatggaagagaaaacctaaagagagaaaacta 40626276  T
Q  207 gggccgac 214  Q
    ||||||||    
T  40626277 gggccgac 40626284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 40659975 - 40660183
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  40659975 aacaacgccgcacaagacgacgaacaacaaagcaccacacttagatgatgaaatcacaaagaa-aaaatctagatctatgtgaaaatcacttatttagat 40660073  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagaga 200  Q
    ||||||  |||||||||||| ||||||  ||||||||||||||||||||||  |||||||||| ||||||||||||   | ||||||| ||| | |||||    
T  40660074 tgaaat--agagaaaaagatgaagatgtgtgatttcaggtcaagaattgactcaaaaccaccctcaatgaagaaactctaagagaaaatctaaaaagaga 40660171  T
Q  201 aaattagggccg 212  Q
    ||| ||||||||    
T  40660172 aaactagggccg 40660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 32913279 - 32913117
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||    
T  32913279 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaatcacttatttaaat 32913181  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    ||||||| |||||||| ||| |||| |  ||||||||||||||||||||| | |||||||||||    
T  32913180 tgaaatatagagaaaaggatcaagaggggtgatttcaggtcaagaattgatccaaaaccacccc 32913117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 41712821 - 41713033
Alignment:
Q  14 aagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaga 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||| |||||||||||| ||||||||||||||| |||||||||||    
T  41712821 aagacgacgaacaacaaaccaccacacttagatgaggaaatcacagagaaaaaaacctaaatctatgtgaaaatcacttatttagattaaaatagagaga 41712920  T
Q  114 aaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggccg 212  Q
    ||| ||| || |||  |||||||| |||||||||| ||| ||||||||||| |||||||||||  | | ||||||||||||| |||||||| ||||| ||    
T  41712921 aaatgatgaaaatgggtgatttcacgtcaagaattaacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagatagagaaaactagggtcg 41713020  T
Q  213 acttgttggagag 225  Q
     ||| ||||||||    
T  41713021 gcttattggagag 41713033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 7015754 - 7015928
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||| ||| ||||||||||    
T  7015754 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaggaa-aaaacctaaatctatgtgaaaatcaattatttagat 7015852  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacc-acccccaatgaagaaa 175  Q
    ||||||| |||||||||||| | || |  ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  7015853 tgaaataaagagaaaaagattaggaggggtgatttcaggtcaagaattgacccaaaaccaacccccaatgaagaaa 7015928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 3725218 - 3725013
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| | |||||||||||||| ||||||||||| ||    
T  3725218 aacaacgccgtacaagacaacgaacaacaaaccaccacacttagacgatgaaatcacaaagaa-aaaatcaagatctatgtgaaaatcacttatttatat 3725120  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||| ||||||||| ||||||| |||||||| ||||||||||| |||| ||||||  | | |||||||| || | ||||    
T  3725119 tgaaatagagagaaaaagatgaagaggaatgattttaggtcaaaaattgacccaaaaccacccctcaataaagaaattgtaagagaaaacttaaaaagag 3725020  T
Q  200 aaaatta 206  Q
    |||||||    
T  3725019 aaaatta 3725013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 9 - 235
Target Start/End: Complemental strand, 25087067 - 25086839
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaa----agtcacttatttagattgaa 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    | |||||||| |||||| ||    
T  25087067 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaataa-aaaacctagatctatgtgaaaatcactcacttatatagattcaa 25086969  T
Q  105 atagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaa 203  Q
    |||||  ||||||||| |||| |  |||||||||||||| |||||||| |||||||||||  ||||||||||| ||| ||||||||||  ||||||||||    
T  25086968 atagatggaaaaagatgaagaggggtgatttcaggtcaataattgacccaaaaccacccctaaatgaagaaaccggaagagaaaacct--agagagaaaa 25086871  T
Q  204 ttagggccgacttgttggagagggaggggaag 235  Q
     ||| |||| ||| || ||||||||| |||||    
T  25086870 ctagagccggcttattcgagagggagaggaag 25086839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 41431066 - 41430929
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||||||||||||    
T  41431066 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaacacctagatctatgtaaaagtgacttatttagat 41430967  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcag 138  Q
    ||||||| |||||||||||| |||| |  |||||||||    
T  41430966 tgaaatatagagaaaaagatgaagaggggtgatttcag 41430929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 4228171 - 4228011
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| |||||||||||| || ||||||||||| |    
T  4228171 aacaacgccgcacaagacgacgaacaacaaaccatcacacttagatgatgaaatcacaaagaaaaaaaacatagatctatgtgtaaatcacttatttata 4228072  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca 160  Q
    |||||||| ||| ||||| || ||||||  ||||||||||||||||||||||| |||||||    
T  4228071 ttgaaataaagataaaaatatgaagatgtgtgatttcaggtcaagaattgacccaaaacca 4228011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 26025453 - 26025689
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||||||||||||    
T  26025453 aacaacgccgcacaagacgacgaccaacaaactaccacacttacatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaaccacttatttagat 26025551  T
Q  101 tgaaatagagagaaaaagataaagat-gaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagag- 197  Q
    |||||||||||||||||||| ||||| |  ||||||||| |||| || |    | |||| | ||| | ||||||||||  || ||||||||||||||||     
T  26025552 tgaaatagagagaaaaagatgaagatggggtgatttcagatcaaaaaat----tgaaactatccctcgatgaagaaactagaagagaaaacctagagaga 26025647  T
Q  198 ---agaaaattagggccgacttgttggagagggaggggaaga 236  Q
       | |||| |||||||| |||||||||||||||||||||||    
T  26025648 aaaaaaaaactagggccggcttgttggagagggaggggaaga 26025689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 4192866 - 4192717
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||| ||    
T  4192866 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacctaaatatatgtgaaaatcacttatttagattgaaatatag 4192768  T
Q  111 agaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac 161  Q
    |||||||||| |||| |  |||| ||||||||| |||||| | ||||||||    
T  4192767 agaaaaagatgaagaggggtgatctcaggtcaaaaattgatccaaaaccac 4192717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 459328 - 459545
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 111  Q
    ||||||||||||||| || ||||| ||||| |||||| |||||||| ||||| |||||||| |||||||||||| || |||||||| | |||||||||||    
T  459328 acaagacgacgaacagcacaccacgacactcagatgacgaaatcacgaagaaaaaaacctatatctatgtgaaaatcgcttatttaaaatgaaatagaga 459427  T
Q  112 gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggc 210  Q
    ||||| ||| |||| |  |||||||||||||| |||||||| ||||||||||| |||||||||||| ||| |||||||||||  || | | ||||||| |    
T  459428 gaaaaggatgaagaggggtgatttcaggtcaaaaattgacccaaaaccacccctcaatgaagaaactggaagagaaaacctaaggaaaaataattaggac 459527  T
Q  211 cgacttgttggagaggga 228  Q
      ||||||||||||||||    
T  459528 ttacttgttggagaggga 459545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 22421766 - 22421659
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22421766 ccgcgcaagatgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaagtcacttatttagattgaaata 22421668  T
Q  108 gagagaaaa 116  Q
    |||||||||    
T  22421667 gagagaaaa 22421659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 27477186 - 27476958
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||||||||||||||| || |||||||||||||||      |||||||||||||||||||| |||| |||||||||||||||| | ||||||||||||    
T  27477186 aacagcgccgcacaagactacaaacaacaaaccacca------gatgatgaaatcacaaagaa-aaaatctagatctatgtgaaaattacttatttagat 27477094  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||||||| |||| |  |||||||| ||||| |||||||| ||||||| ||| ||||  | || |  || || |||||||||||| ||    
T  27477093 tgaaatatagagaaaaagatgaagaggggtgatttcatgtcaataattgacccaaaaccatccctcaatagaaaatcaagaagaaaaaacctagagacag 27476994  T
Q  200 aaaattagggccgacttgttggagagggaggggaag 235  Q
    |||| ||||||| |||| |||||||||||| |||||    
T  27476993 aaaactagggccaacttattggagagggagaggaag 27476958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 17319360 - 17319139
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| ||||||||||| |||||||| ||||||||||| |||||| |||||||  ||||| ||||||||||||||||||||| | | ||||||||||    
T  17319360 aacaacgctgcacaagacgaagaacaacacaccaccacactcagatgacgaaatcatgaagaa-aaaacctagatctatgtgaaaat-agttatttagat 17319263  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagaga 200  Q
    ||||||||| ||||||| || | || | ||||||||||||||| |||||||| ||| ||| || || |||| ||||  || ||||||||||||||||| |    
T  17319262 tgaaatagatagaaaaa-atgaggagggatgatttcaggtcaaaaattgacccaaatccatcctcattgaaaaaactcgaagagaaaacctagagagaaa 17319164  T
Q  201 aaattagggccgacttgttggagag 225  Q
    ||| ||| |||| ||||||||||||    
T  17319163 aaactagagccgtcttgttggagag 17319139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 8805896 - 8805789
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| |||||||||     
T  8805896 cgcacaagacgacgaacaacaaaccaccacactcagatgatgaaatcacaaagaa-aaaacctagatccatgtgaaaatcacttatttaaattgaaataa 8805798  T
Q  109 agagaaaaa 117  Q
    |||||||||    
T  8805797 agagaaaaa 8805789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 27949464 - 27949272
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaa---agaagaaaacctagatctatgtgaaagtcacttattta 97  Q
    |||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||   | || ||||||||||||||||||||| |||||||||||    
T  27949464 aacaacgccgtacaagacgacgaacaataaaccaccacacttagatgatgaaatcgcaatagaaaaaaaaacctagatctatgtgaaaatcacttattta 27949365  T
Q  98 gattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc--aatgaagaaacgggatgagaaaac 189  Q
    |||||||| |||| ||||| ||| || | |  |||||||||||||||||||| || |||| |||||||  ||||||||||  ||| ||||||||    
T  27949364 gattgaaacagagcgaaaaggatgaata-gtgtgatttcaggtcaagaattgtcccaaaatcacccccttaatgaagaaaatggaagagaaaac 27949272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 39641909 - 39642051
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||||| |||||||||   ||||| ||| | ||||||||||||||| ||||| |||| ||||||||||||||||| ||| ||||||| |||||||||    
T  39641909 cgcacaagatgacgaacaaactaccacaacattcagatgatgaaatcacgaagaaaaaaaacctagatctatgtgaaaatcatttatttaaattgaaata 39642008  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattga 150  Q
    ||||||||||||| ||||| | |||||||||||||| ||||||    
T  39642009 gagagaaaaagatgaagataagtgatttcaggtcaaaaattga 39642051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 46 - 229
Target Start/End: Original strand, 31581808 - 31581974
Alignment:
Q  46 tgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaaga 145  Q
    ||||||||||| |||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||                 | ||    
T  31581808 tgatgaaatcaaaaagaaaaaaac-tagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaag-----------------agga 31581889  T
Q  146 attgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagagggag 229  Q
    ||||||| ||||||||||| |||||||||||| | | ||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  31581890 attgacccaaaaccacccctcaatgaagaaacagtaagagaaaacctagagagaaaaaattaaggccgacttgttggagagggag 31581974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3269154 - 3269251
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac-aaagaagaaaacctagatctatgtgaaagtcacttattta 97  Q
    |||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||    
T  3269154 aacaacgccccacaaaacgacgaacaacaagccaccacacttagatgatgaaatcacaaaaaaaaaaaacctagatctatgtgaaaatcacttattta 3269251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3269713 - 3269810
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac-aaagaagaaaacctagatctatgtgaaagtcacttattta 97  Q
    |||| |||| ||||| |||||||||||||| |||||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||    
T  3269713 aacaacgccccacaaaacgacgaacaacaagccaccacacttagatgatgaaatcacaaaaaaaaaaaacctagatctatgtgaaaatcacttattta 3269810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 176
Target Start/End: Complemental strand, 42949696 - 42949576
Alignment:
Q  58 aaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagag-aaaaagataaagatgaatgatttcaggtcaagaattgacctaaa 156  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||| |||| |  |||||||| |||||||||| || ||||    
T  42949696 aaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaaagatgaagaggggtgatttcaagtcaagaattaacataaa 42949597  T
Q  157 accacccc-caatgaagaaac 176  Q
    | |||||| ||| ||||||||    
T  42949596 atcacccctcaacgaagaaac 42949576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 32197844 - 32197986
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    ||||| |||||||| |  ||||| || ||||||||||||||| |||||||||||||| |||||||| || ||||  ||| ||| ||||||| ||||||||    
T  32197844 gccgcgcaagacgatgggcaacacactaccacacttagatgacgaaatcacaaagaa-aaaacctaaatttatgcaaaaatcatttatttatattgaaat 32197942  T
Q  107 agagagaaaaagataaagatgaatgatttcaggtcaagaattga 150  Q
    | |||||||||||| ||||||| ||||||  |||||| ||||||    
T  32197943 aaagagaaaaagatgaagatgagtgatttttggtcaaaaattga 32197986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 30923520 - 30923679
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaa--acctagatctatgtgaaagtcacttatttagattga 103  Q
    ||||||||||||||||  |||||| | | ||||||  ||| || |||||||||||| |||||  | || ||||||||| ||| ||| |||||||||||||    
T  30923520 cgccgcacaagacgacatacaacacagcgccacacccagacgacgaaatcacaaaggagaaattatcttgatctatgtaaaaatcatttatttagattga 30923619  T
Q  104 aatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc 165  Q
    |||||||   ||||||| ||||||  ||||||| |||||| |||||||||||||| ||||||    
T  30923620 aatagagt--aaaagatgaagatgggtgatttcgggtcaaaaattgacctaaaacgaccccc 30923679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 99 - 229
Target Start/End: Original strand, 33229129 - 33229260
Alignment:
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||||||||| |||||||| ||||    |||||| || |||| |||||||| ||||||||||  |||||||||||| | | ||||||||||||||||    
T  33229129 attgaaatagagaaaaaaagatgaagagaggtgattttagctcaataattgacccaaaaccacccttcaatgaagaaacagtaagagaaaacctagagag 33229228  T
Q  198 agaaaattagggccgacttgttggagagggag 229  Q
    || ||| |||||||| |||||| |||||||||    
T  33229229 aggaaactagggccggcttgtttgagagggag 33229260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 31580632 - 31580686
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatc 55  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31580632 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatc 31580686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 9 - 176
Target Start/End: Original strand, 9374607 - 9374768
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    ||||||||| ||||||||||| ||||||||| | |||||| |||||||| ||||| ||| | ||||| ||||||||| || |||||||      ||||||    
T  9374607 cgcacaagatgacgaacaacacaccaccacaataagatgacgaaatcacgaagaa-aaatcttagatttatgtgaaaatcccttattt------aaatag 9374699  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaac 176  Q
    | |||||||||| ||||    |||||||| ||||| |||||||| ||||||| ||| ||||||||||||    
T  9374700 aaagaaaaagatgaagaatgttgatttcatgtcaaaaattgacccaaaaccatccctcaatgaagaaac 9374768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 164
Target Start/End: Complemental strand, 18695014 - 18694922
Alignment:
Q  73 gatctatgtgaaagtcacttatttagattgaaatagagaga-aaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    ||||||||| ||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||  ||| || | |||||| || ||||||||    
T  18695014 gatctatgtaaaaatcacttatttagattgaaatagagagaaaaaagatgaagatgaatgattttgggtaaaaagttgacccaataccacccc 18694922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 8308209 - 8308097
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| ||||||||||||||||||||  |  ||||| | |||||| |||||||| ||||| ||||||||||||||||||||| ||||  ||||||||    
T  8308209 aacaacgctgcacaagacgacgaacaacacgcg-ccacagtcagatgacgaaatcacgaagaa-aaaacctagatctatgtgaaaatcac--atttagat 8308114  T
Q  101 tgaaatagagagaaaaa 117  Q
    |||| |||||| |||||    
T  8308113 tgaattagagaaaaaaa 8308097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 18763490 - 18763436
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | |||| |||||||| ||||||||||||||    
T  18763490 cgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcacaaa 18763436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 39310934 - 39310984
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  39310934 gcacaagacgaagaacaacacaacaccacacttagatgatgaaatcacaaa 39310984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 12647996 - 12648052
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac 57  Q
    |||| |||||||||||||||||||||||| | |||| |||||||| |||||||||||    
T  12647996 aacaacgccgcacaagacgacgaacaacacaacaccgcacttagacgatgaaatcac 12648052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 10248171 - 10248077
Alignment:
Q  14 aagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 110  Q
    |||||| | ||||||| ||| ||||||| |||||| ||| |||| |||||  |||||||||||||| |  || ||||||| ||||||||||||||||    
T  10248171 aagacggcaaacaacacaccgccacactcagatgacgaagtcacgaagaa--aaacctagatctatatagaaatcacttaattagattgaaatagag 10248077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 38293514 - 38293450
Alignment:
Q  70 ctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgattt 135  Q
    |||||||||||||||| |||||||||| |||||||||| | |||||| ||| ||||||| ||||||    
T  38293514 ctagatctatgtgaaa-tcacttattttgattgaaatacatagaaaatgatgaagatgagtgattt 38293450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 105
Target Start/End: Original strand, 10237305 - 10237398
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    |||||||||||||||||||| | |  | |||| ||| || |||||||| ||  |||||| || ||| ||||||||| |||||||||||||||||||    
T  10237305 gcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaa--agaaaaacttgatgtatgtgaaaatcacttatttagattgaaa 10237398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 117
Target Start/End: Original strand, 23933778 - 23933818
Alignment:
Q  77 tatgtgaaagtcacttatttagattgaaatagagagaaaaa 117  Q
    ||||||||||||||||||||||||||||||| || ||||||    
T  23933778 tatgtgaaagtcacttatttagattgaaataaagggaaaaa 23933818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 36323847 - 36323781
Alignment:
Q  50 gaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaa 117  Q
    ||||||||| |||| |||||||| |||||||||||| ||||||||||||| || ||||| || |||||    
T  36323847 gaaatcacagagaa-aaaacctaaatctatgtgaaaatcacttatttagaatgtaatagtgataaaaa 36323781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 36943199 - 36943262
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac 69  Q
    |||||||||||||||||||||||| | | || |||||||| || ||||||||||| || |||||    
T  36943199 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaaaaaaaaaac 36943262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Complemental strand, 1421694 - 1421644
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||| | |||| |||||||| || |||||||||||    
T  1421694 gcacaagacgacgaacaacataacaccgcacttagacgacgaaatcacaaa 1421644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 7677951 - 7678005
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  7677951 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 7678005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 9418395 - 9418326
Alignment:
Q  65 aaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgattt 135  Q
    |||| |||||||||||||||| ||||||| ||| ||||||||||||| ||||  || ||||||| ||||||    
T  9418395 aaaaactagatctatgtgaaaatcactta-ttaaattgaaatagagataaaacaattaagatgagtgattt 9418326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 3308896 - 3308851
Alignment:
Q  62 aagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||| || ||| ||||||||| |||||||||||||||||||||    
T  3308896 aagaaaaacttgatgtatgtgaaaatcacttatttagattgaaata 3308851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 70 - 119
Target Start/End: Complemental strand, 10548190 - 10548141
Alignment:
Q  70 ctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaaga 119  Q
    |||||||||| ||||| ||| | ||||||||||||||||||||| |||||    
T  10548190 ctagatctatatgaaaatcaataatttagattgaaatagagagagaaaga 10548141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 23903391 - 23903294
Alignment:
Q  41 ttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttca 137  Q
    ||||| || |||||||| ||||| ||||  |||||| ||||| |||  |||||||||| ||| |||| ||||||||||||||||| || || ||||||    
T  23903391 ttagacgacgaaatcacgaagaaaaaaaatctagatatatgtcaaaaccacttatttatattaaaatggagagaaaaagataaaggtggataatttca 23903294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 37876685 - 37876738
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||||||||||||||||| | || |||||||| ||  ||||||||||    
T  37876685 gccgcacaagacgacgaacaacaaaacgccgcacttagacgaccaaatcacaaa 37876738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 7646495 - 7646443
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaca 58  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||    
T  7646495 cgccgcacaagacgacgaacaacataacgccgcacttagacgacgaaatcaca 7646443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 5e-91; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 22927913 - 22928138
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||    
T  22927913 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaactagatctgtgtgaaagtcacttatttagat 22928012  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc-aatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| || | |  ||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||    
T  22928013 tgaaatagagagaaaaagatgaaaaggggtgatttcaggtcaagaattgacccaaaaccaccccctaatgaagaaacgggaagagaaaacctagagagag 22928112  T
Q  200 aaaattagggccgacttgttggagag 225  Q
    ||||||||||||| ||||||||||||    
T  22928113 aaaattagggccggcttgttggagag 22928138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 1485300 - 1485521
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  1485300 aacaacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaatctagatctatgtgaaagtcacttatttagat 1485398  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||| |  |||||| |||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||  ||||||    
T  1485399 tgaaatagagagaaaaagatgaagacgggtgattttaggtcaagaattaacccaaaaccaccccccaatgaagaaacgggaagagaaaacct--agagag 1485496  T
Q  200 aaaattagggccgacttgttggaga 224  Q
    |||||||||||||||||||||||||    
T  1485497 aaaattagggccgacttgttggaga 1485521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 7 - 229
Target Start/End: Complemental strand, 23085549 - 23085327
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  23085549 gccgcacatgacgacgaacaacaaaccaccacacttagatgataaaatcacaaagaaaaaaacctagatctatgtgaaagtcaattatttagattgaaat 23085450  T
Q  107 agagagaaaaagataaaga-tgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagagaaaatt 205  Q
    ||| |||||||||| ||||  |  |||||||| ||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  23085449 agaaagaaaaagatgaagagggggtgatttcaagtcaataattgacccaaaaccacccccaatgaagaaac-ggaagagaaaacctagagagagaaaatt 23085351  T
Q  206 agggccgacttgttggagagggag 229  Q
    |||| || ||||||||||||||||    
T  23085350 agggtcggcttgttggagagggag 23085327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 26583748 - 26583519
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||    
T  26583748 aacaacgccgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatatatatgaaaatcacttatttagat 26583649  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||||||| |||||||| |||| |  ||||||||||||||||||||||| ||||||||||| |||||||||||| | | || |||||||||| ||||    
T  26583648 tgaaatagagataaaaagatgaagaggggtgatttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactgtaagaaaaaacctagaaagag 26583549  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    |||| |||||||| ||||||||||||||||    
T  26583548 aaaactagggccggcttgttggagagggag 26583519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 42311314 - 42311085
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  42311314 aacaacgctgcataagacgacgaacaacaaaccgccacacttaaatgatgaaatcacaaagaaaaaaacctagatctatgtgaatatcacttatttagat 42311215  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||| ||| |||| | |||||||||||||||||||||||| ||||||||||| || |||||||||   | ||||||||||||||||||    
T  42311214 tgaaatagagagaaaatgatgaagagggatgatttcaggtcaagaattgacccaaaaccacccctcagtgaagaaactctaagagaaaacctagagagag 42311115  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    |||||||||| || ||||||||||||||||    
T  42311114 aaaattagggtcggcttgttggagagggag 42311085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 35496218 - 35496426
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||    
T  35496218 aacaacgccgcacaagacgatgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttaattagat 35496317  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||||   |||||| |||||||||||||||| ||||||||||| |||||||||||| | | ||||||||||| ||||||    
T  35496318 tgaaatagagagaaaaagatgaagattggtgattttaggtcaagaattgacccaaaaccacccctcaatgaagaaacagtaagagaaaacctaaagagag 35496417  T
Q  200 aaaattagg 208  Q
    |||||||||    
T  35496418 aaaattagg 35496426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 433734 - 433944
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccacc-acacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  433734 aacaacgctgcacaagacaacgaacaacaaaccacccacacttagatgatgaaatcacaaagaaaaaaatctagatctatgtgaaagtcatttatttaga 433833  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||||||||||||||||| || | | ||||||||||||||| |||||||| ||||||| |||||||||||||||  || ||||||||||||||| ||    
T  433834 ttgaaatagagagaaaaagatgaaaagggatgatttcaggtcaaaaattgacccaaaacca-ccccaatgaagaaaccagaagagaaaacctagagaaag 433932  T
Q  200 aaaattagggcc 211  Q
    ||||||| ||||    
T  433933 aaaattaaggcc 433944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 9 - 231
Target Start/End: Complemental strand, 20116608 - 20116386
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    |||||||||||||||||||||||| ||||||  || ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  20116608 cgcacaagacgacgaacaacaaacaaccacatgtatatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaatcacttatttagattgaaatag 20116510  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattag 207  Q
    | |||||||||| |||| |  |||||||||||||| |||||||| ||||| ||||| || |||||||||  || |||||||| ||||||||||||| |||    
T  20116509 atagaaaaagatgaagaagggtgatttcaggtcaaaaattgacccaaaactacccctcattgaagaaacttgaagagaaaacatagagagagaaaactag 20116410  T
Q  208 ggccgacttgttggagagggaggg 231  Q
    ||||||||||||||||| ||||||    
T  20116409 ggccgacttgttggagaaggaggg 20116386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 26492399 - 26492172
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| |||||||||| || |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||| ||    
T  26492399 aacaacgcagcacaagacggcggacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaactagatctatgtgaaaatcacttatttaaat 26492300  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||| |  | ||||||||||||||||||||| ||||||||||| |||||||||||| | | || |||| |||||||||     
T  26492299 tgaaatagagagaaaaagatgaagaggggttatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagacaaaatctagagagat 26492200  T
Q  200 aaaattagggccgacttgttggagaggg 227  Q
    |||| |||||||| ||| ||||||||||    
T  26492199 aaaactagggccggcttattggagaggg 26492172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 46822049 - 46821818
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||| ||||  |||||||||||||||| |||||||||||||    
T  46822049 aacaacgccgcacaagaagacgaacaacaaatcaccatacttagatgatgaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttatttaga 46821950  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| |||||||||||| |||| |  ||||||||||||||||||||||| ||||||||||| ||||||| |||    | |||||||||||||||||    
T  46821949 ttgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaaaaaattataagagaaaacctagagaga 46821850  T
Q  199 gaaaattagggccgacttgttggagagggagg 230  Q
    ||||| |||||||| |||||||||||||||||    
T  46821849 gaaaactagggccggcttgttggagagggagg 46821818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 1448873 - 1449098
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| || |||| |||||||||||||||| ||||||||||||||    
T  1448873 aacaacgccgcacaatacgacgaacaacaaacaaccacacttagatgatgaaatcacaaataa-aaaatctagatctatgtgaaaatcacttatttagat 1448971  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||||||||||| |||| ||| |   | ||||||||||||||||||||| ||||||||||| |||  ||||| | ||| || |||||||||||||||    
T  1448972 tgaaatagagagaaagagatgaagtttggttatttcaggtcaagaattgacccaaaaccacccctcaacaaagaatctggaagaaaaaacctagagagag 1449071  T
Q  200 aaaattagggccgacttgttggagagg 226  Q
    |||| |||||||| |||||||||||||    
T  1449072 aaaactagggccggcttgttggagagg 1449098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 35667280 - 35667509
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  35667280 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaagaa-aaaacctagatctatgtgaaaatcacttatttagattgaaa 35667378  T
Q  106 tagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaat 204  Q
    |||||||||||| || |||| |  |||||| | |||||||||||| | ||||||||||| ||||||| |||   || |||||||| || | | ||||||     
T  35667379 tagagagaaaaatatgaagaagggtgattttaagtcaagaattgatccaaaaccacccctcaatgaaaaaattagaagagaaaactta-aaaaagaaaac 35667477  T
Q  205 tagggccgacttgttggagagggaggggaaga 236  Q
    |||||||||||||||||||| ||||| |||||    
T  35667478 tagggccgacttgttggagaaggaggagaaga 35667509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 2843288 - 2843499
Alignment:
Q  17 acgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaa 116  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| ||  |||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  2843288 acgacgaacaacaaatcaccacacttagatgatgaaattacaaaaaa--aaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaa 2843385  T
Q  117 agataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagagagaaaattagggccgact 215  Q
    |||| |||| |  || |||||||||||||||||||| ||||||||||  |||||||||||  | | |||||||||||||||||||||| |||| ||| ||    
T  2843386 agatgaagaggggtgttttcaggtcaagaattgacccaaaaccacccttcaatgaagaaattgtaagagaaaacctagagagagaaaactaggaccgcct 2843485  T
Q  216 tgttggagagggag 229  Q
    ||||||||||||||    
T  2843486 tgttggagagggag 2843499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 48207935 - 48207720
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  48207935 aacagcgcagcacaagacgacgaacaacaaatcaccacacttagatgatgaaatcacaaagaa-aaaacatagatctatgtgaaaatcacttatttagat 48207837  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagaga 200  Q
    |||||||  ||||||||||| |||| |  ||||||||||||||||| ||||| |||||||||| | ||||| || |  || ||||||||||| |||||||    
T  48207836 tgaaatattgagaaaaagatgaagaggggtgatttcaggtcaagaa-tgacccaaaaccaccctcgatgaaaaatctagaagagaaaacctaaagagaga 48207738  T
Q  201 aaattagggccgacttgt 218  Q
    ||| || |||||||||||    
T  48207737 aaactatggccgacttgt 48207720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 23425415 - 23425577
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  23425415 aacagcaccgcacaagacgacgaacaacaaaccaccacacttaaatgatgaaatcacaaagaa-aaaacctagatctatgtaaaaatcacttatttagat 23425513  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    ||||||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||||||||    
T  23425514 tgaaatatagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccc 23425577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 9 - 229
Target Start/End: Complemental strand, 21266416 - 21266197
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||  ||| ||||||||||||||||| |||||||||||||||||||||     
T  21266416 cgcacaagacgacgaataacaaaccaccacacttagatgatgaaatcaaaaaga--aaaccctagatctatgtgaaaatcacttatttagattgaaataa 21266319  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattag 207  Q
    |||||||||||| ||||    |||||||| ||||| |||||||| ||||||||||| |||| ||||||| ||| || ||||| || |||||||||| |||    
T  21266318 agagaaaaagatgaagagaggtgatttcatgtcaataattgacccaaaaccacccctcaataaagaaactggaagaaaaaacttaaagagagaaaactag 21266219  T
Q  208 ggccgacttgttggagagggag 229  Q
    ||||| ||| ||||||||||||    
T  21266218 ggccggcttattggagagggag 21266197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 42408396 - 42408237
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||  || ||||||||||    
T  42408396 aacaacgctgcacaagacgacgaacaacaaaccaccacacttaaatgatgaaatcacaaagaaaaaaacctagatccatgtgaaaaacaattatttagat 42408297  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca 160  Q
    ||||||| |||||||||||| |||||| |||||||||||||||||| ||||| |||||||    
T  42408296 tgaaataaagagaaaaagatgaagatggatgatttcaggtcaagaactgaccaaaaacca 42408237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 45199075 - 45199278
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||| ||    
T  45199075 aacagcgccgcacaaaacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacttagatctatatgaaaatcacttatttaaat 45199173  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    | ||||| |||||||||||| ||||||  |||||||||||||| | |||| | |||||||||||  |||| | || |  || |||||||| |||||||||    
T  45199174 taaaatatagagaaaaagatgaagatgggtgatttcaggtcaatagttgatccaaaaccacccctgaatggaaaatctagaagagaaaacttagagagag 45199273  T
Q  200 aaaat 204  Q
    |||||    
T  45199274 aaaat 45199278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 46339088 - 46338912
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||  |||||||||||||||| ||||||||||| |    
T  46339088 aacaacgccgcacaagacgacgaacaacaaatcaccacacttaaatgatgaaattacaaagaaaaaaaagctagatctatgtgaaaatcacttatttaca 46338989  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaa 175  Q
    |||||||| |||||||||||| |||| | || ||||||||||||||||||||| ||||| ||||| |||||||||||    
T  46338988 ttgaaataaagagaaaaagatgaagagggataatttcaggtcaagaattgacccaaaactacccctcaatgaagaaa 46338912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 42067104 - 42067265
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| ||| |||||||||||| ||||||||||||||    
T  42067104 aacagcgccgcacaagacgacgaacaacaaaccaacacacttagatgatgaaatcagaaagaa-aaaatctatatctatgtgaaaatcacttatttagat 42067202  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc 163  Q
    ||||||| ||| || ||||| ||||    ||||||||||||||||||||||| |||| |||||    
T  42067203 tgaaatatagataacaagatgaagagaggtgatttcaggtcaagaattgacccaaaatcaccc 42067265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 14627922 - 14628139
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| || ||||||||| ||||||||||||||    
T  14627922 aacaacgccgcacaatacgacgaacaacaaaccaccacacttagatgatgaaatcacaaggaaaaaaacctatatttatgtgaaaatcacttatttagat 14628021  T
Q  101 tgaaatagagagaaaaagataaagatga-atgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||| |||||| |||||||| |||| ||  | ||||| ||| || | |||||| ||||||||||  ||||||||| || | | || ||||| |||||||     
T  14628022 tgaattagagaaaaaaagatgaagaggaggtaatttccggtaaaaatttgacccaaaaccacccttcaatgaagacactgtaagaaaaaacttagagagc 14628121  T
Q  199 gaaaattagggccgactt 216  Q
    ||||| ||||||||||||    
T  14628122 gaaaactagggccgactt 14628139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 31235835 - 31236044
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtg-aaagtcacttatttaga 99  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||| ||||||||  || |||||||||||||||||||| ||| |||||||||||||    
T  31235835 aacaacgctgcacaagacgacgaacaacaaaccgccacacttagatgacgaaatcacgtag-agaaaacctagatctatgtgaaaaatcacttatttaga 31235933  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca--cccccaatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||||||||||||||||| |||| |   ||||||| ||||| |||||||| |||| ||  ||| |||||||||||  ||| ||||||| ||||||||    
T  31235934 ttgaaatagagagaaaaagatgaagaggggagatttcatgtcaaaaattgacccaaaatcactccctcaatgaagaaaatggaagagaaaatctagagag 31236033  T
Q  198 agaaaattaggg 209  Q
    | ||||||||||    
T  31236034 a-aaaattaggg 31236044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 51 - 229
Target Start/End: Complemental strand, 32684671 - 32684488
Alignment:
Q  51 aaatcacaaagaag--aaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaatt 148  Q
    |||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||    |||||||||||||||||||    
T  32684671 aaatcacaaagaaagaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaagacatgtgatttcaggtcaagaatt 32684572  T
Q  149 gacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaat--tagggccgacttgttggagagggag 229  Q
    |||| ||||||||||| |||||||||||| | | ||||||||||||||||||| |    |||||||| ||||||||||||||||    
T  32684571 gacccaaaaccacccctcaatgaagaaaccgtaagagaaaacctagagagagagagagctagggccggcttgttggagagggag 32684488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 6002055 - 6001856
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||||| ||||||| |||||| ||||||||  ||| ||||||||| ||||||||||||  |||||||||||||    
T  6002055 aacaacgccgcacaagacgacgaacaacaaaccgccacactcagatgacgaaatcacgtaga-gaaaacctaaatctatgtgaaaaatcacttatttaga 6001957  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagag 197  Q
    || |||||| ||||||||||| ||||||  |||||||||||||| |||||| | |||| ||||||  |||| ||||||  ||| ||||||||||| ||||    
T  6001956 ttaaaatagggagaaaaagatgaagatgggtgatttcaggtcaaaaattgatccaaaatcaccccttcaataaagaaaatggaagagaaaacctaaagag 6001857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 32521970 - 32522198
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||| ||||||||||| || |||||||| |||||  ||||| || ||||| ||||| || |||||||||||| ||||||||||| ||    
T  32521970 aacaacgccgcacaagatgacgaacaacacacaaccacactcagatggcgaaataacgaagaa-aaaacataaatctatgtgaaaatcacttatttaaat 32522068  T
Q  101 tgaaatagagag-----aaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctaga 194  Q
    ||||||||||||     |||||||| ||||||  |||||||||||||| | | |||||||||||| ||| ||||||||||   ||| |||||||||||||    
T  32522069 tgaaatagagagagaaaaaaaagatgaagatgggtgatttcaggtcaa-attcgacctaaaaccatccctcaatgaagaagttggaagagaaaacctaga 32522167  T
Q  195 gagagaaaattagggccgacttgttggagag 225  Q
    |||  |||| || ||||||||||||||||||    
T  32522168 gaggaaaaactaaggccgacttgttggagag 32522198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 17223047 - 17223136
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttattt 96  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  17223047 cgccgcacaagacgatgaacaacaaatcaccacacttagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaatcacttattt 17223136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 6558900 - 6558817
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaag-aaaacctagatctatgtgaaagtcacttat 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||    
T  6558900 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaaacctaaatctatgtgaaaatcacttat 6558817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 12539127 - 12539227
Alignment:
Q  130 tgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagaggga 228  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| ||| ||||||| |||||||||||||| ||||| || |||||||||||||||    
T  12539127 tgatttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactggaagagaaaatctagagagagaaaactagggtcggcttgttggagaggga 12539226  T
Q  229 g 229  Q
    |    
T  12539227 g 12539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 23786609 - 23786508
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  ||||| | ||||||| ||||||||||||||    
T  23786609 aacaacgccgcagaagacgacgaacaacaaaccaccacacttagatgatg-aatcacaaagaa-aaaatttagatatgtgtgaaaatcacttatttagat 23786512  T
Q  101 tgaa 104  Q
    ||||    
T  23786511 tgaa 23786508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 25 - 178
Target Start/End: Complemental strand, 36143875 - 36143722
Alignment:
Q  25 caacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaag 124  Q
    ||||| ||||||||||| ||| || |||||||| ||||| |||||||||||||| ||||||  ||||||||||||||||| ||||||||||||||| |||    
T  36143875 caacacaccaccacactcagacgacgaaatcacgaagaa-aaaacctagatctacgtgaaaaacacttatttagattgaattagagagaaaaagatgaag 36143777  T
Q  125 atgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgg 178  Q
    ||| || |||||| || || | |||| | ||||| ||||| ||||||| ||||||    
T  36143776 atggataatttcacgttaaaatttgatccaaaacaacccctcaatgaaaaaacgg 36143722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 17499710 - 17499906
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    |||||||||||  |||||| | ||||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||| | ||||||||                
T  17499710 cgcacaagacggtgaacaatacaccactacacttagatgatgaaatcacaatgaa-aaaacctagatctttgtgaaaataacttattt------------ 17499796  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattag 207  Q
    |||||||||||| ||||||| |||||| |||| ||  ||||||| ||||| ||||| ||||||||||||  || ||||||| ||| ||||| |||| ||     
T  17499797 agagaaaaagatgaagatgagtgattttaggttaaatattgacccaaaactacccctcaatgaagaaactagaagagaaaatctaaagagaaaaaactaa 17499896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 17553504 - 17553308
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    |||||||||||  |||||| | ||||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||| | ||||||||                
T  17553504 cgcacaagacggtgaacaatacaccactacacttagatgatgaaatcacaatgaa-aaaacctagatctttgtgaaaataacttattt------------ 17553418  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattag 207  Q
    |||||||||||| ||||||| |||||| |||| ||  ||||||| ||||| ||||| ||||||||||||  || ||||||| ||| ||||| |||| ||     
T  17553417 agagaaaaagatgaagatgagtgattttaggttaaatattgacccaaaactacccctcaatgaagaaactagaagagaaaatctaaagagaaaaaactaa 17553318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 25 - 226
Target Start/End: Complemental strand, 20083343 - 20083139
Alignment:
Q  25 caacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctat--gtgaaagtcacttatttagattgaaatagagagaaaaagataa 122  Q
    ||||| |||| ||||||||||||  |||||||  ||||| ||||||||||| |||  |||||| |  |||||||||||||||||||| |||||||||| |    
T  20083343 caacacaccatcacacttagatgtcgaaatcatgaagaaaaaaacctagatatatatgtgaaaattgcttatttagattgaaatagaaagaaaaagatga 20083244  T
Q  123 agatgaatgatttcaggtcaagaattgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttg 220  Q
    ||| |    |||| ||||||| |||| |||||||||||||||  || ||||||||| ||| ||||||| ||||||||  |||| ||   ||| |||||||    
T  20083243 aga-gtggtattttaggtcaaaaattaacctaaaaccaccccctcattgaagaaactggacgagaaaatctagagaggaaaaactaataccgtcttgttg 20083145  T
Q  221 gagagg 226  Q
    ||||||    
T  20083144 gagagg 20083139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 158
Target Start/End: Complemental strand, 35261319 - 35261174
Alignment:
Q  15 agacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttagattgaaataga-gag 112  Q
    ||||||||||||||| || ||||||||| ||||| |||||||| ||| || |||| ||| || ||||||||| |||||||||| ||||||||| ||  ||    
T  35261319 agacgacgaacaacacacaaccacacttggatgacgaaatcacgaagaaaaaaaatctaaatttatgtgaaaatcacttatttggattgaaatggactag 35261220  T
Q  113 aaaaagataaagatgaatgatttcaggtcaagaattgacctaaaac 158  Q
    |||||||| ||||||  |||||| ||||||| ||||| || |||||    
T  35261219 aaaaagatgaagatgggtgattttaggtcaaaaattggcccaaaac 35261174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 7640815 - 7640928
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac----------aaagaagaaaacctagatctatgtgaaagtcac 90  Q
    |||| |||| |||||| |||||| |||||||||||||||||||||||||||||||||          ||| || |||||||| |||||||||||| ||||    
T  7640815 aacaacgcctcacaaggcgacgagcaacaaaccaccacacttagatgatgaaatcacaaaaaaaaaaaaaaaaaaaaacctatatctatgtgaaaatcac 7640914  T
Q  91 ttatttagattgaa 104  Q
    ||||||||||||||    
T  7640915 ttatttagattgaa 7640928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 3860947 - 3860862
Alignment:
Q  38 cacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaaga 125  Q
    |||||| | ||||||||||| |||||  ||||| |||||||||||||| ||||||||||| ||||||| | |||||||||||||||||    
T  3860947 cacttaaacgatgaaatcacgaagaa--aaaccaagatctatgtgaaaatcacttatttatattgaaacaaagagaaaaagataaaga 3860862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34773745 - 34773653
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcactt 92  Q
    |||| ||||||| ||||||||||| |||||| ||||||||||||||||| |||| |||||| || ||||| ||||||||||| ||| ||||||    
T  34773745 aacaacgccgcataagacgacgaataacaaatcaccacacttagatgatcaaattacaaagaaaaaaaacttagatctatgtaaaaatcactt 34773653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 17611152 - 17611002
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||||||||||||| |||| |||||||||||  ||||| |||||||| ||||| |||| |||| | ||||||||| |      |||| ||||||||     
T  17611152 ccgcacaagacgacgaataacacaccaccacactcggatgacgaaatcacgaagaa-aaaatctagttttatgtgaaaat------tttaaattgaaatg 17611060  T
Q  108 ga-gagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    ||  |||||||||| |||| |  |||||||||||||  ||||||||||||||||||||    
T  17611059 gactagaaaaagatgaagaggggtgatttcaggtcataaattgacctaaaaccacccc 17611002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 5546344 - 5546277
Alignment:
Q  50 gaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaa 117  Q
    ||||| || ||||| ||||| || || ||||||||| |||||||||||||||||||||||||||||||    
T  5546344 gaaatgacgaagaaaaaaacttaaatttatgtgaaaatcacttatttagattgaaatagagagaaaaa 5546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 37837535 - 37837589
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||||||||||||||||||    
T  37837535 cgccgcacaagacgacgaacaacacaacgccgcacttagatgatgaaatcacaaa 37837589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 1575153 - 1575254
Alignment:
Q  35 ccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatt 134  Q
    ||||| ||||| ||||||||||||||||| || |  |||||||||| || | | |||||| || |||||||||  ||||||||||| ||||||| |||||    
T  1575153 ccacatttagacgatgaaatcacaaagaaaaataattagatctatgcgacaataacttatgtaaattgaaataaggagaaaaagatgaagatgagtgatt 1575252  T
Q  135 tc 136  Q
    ||    
T  1575253 tc 1575254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 1100856 - 1100969
Alignment:
Q  47 gatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaa 146  Q
    ||||||||||| ||||| |||  |||||| ||||  ||| |||||| || | |||||||||||||||||||||| ||||||| || |||| |||||| |     
T  1100856 gatgaaatcacgaagaaaaaa--ctagatatatgcaaaaatcacttgttaaaattgaaatagagagaaaaagatgaagatgagtggtttcgggtcaaaat 1100953  T
Q  147 ttgacctaaaaccacc 162  Q
    |||||| ||| |||||    
T  1100954 ttgacccaaagccacc 1100969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 105
Target Start/End: Complemental strand, 24770257 - 24770161
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    |||| |||||||||||||||| | |||| |||||||| || |||||||||||  | ||||  | ||| |||||||||  ||||||||||||||||||    
T  24770257 cgcataagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaaagaaaaaaatttgatatatgtgaaaaccacttatttagattgaaa 24770161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 1749232 - 1749328
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    ||||||||||||||||||||||| | |  | |||| ||| || |||||||| ||  |||||| || ||| ||||||||| |||||||||||||||||||    
T  1749232 gccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaa--agaaaaacttgatgtatgtgaaaatcacttatttagattgaaa 1749328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 8001623 - 8001677
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||||| | || |||||||| || |||||||||||    
T  8001623 cgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaa 8001677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 9450214 - 9450268
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | ||||||||||| || |||||||||||    
T  9450214 cgccgcacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaa 9450268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 126
Target Start/End: Original strand, 1097698 - 1097771
Alignment:
Q  53 atcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagat 126  Q
    ||||| ||||| |||| |||||||||||| |||  |||||||||| ||||||||||| | |||||||| |||||    
T  1097698 atcacgaagaaaaaaaactagatctatgtaaaaaacacttatttaaattgaaatagataaaaaaagatgaagat 1097771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 7740635 - 7740559
Alignment:
Q  39 acttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaa 116  Q
    |||||||| |||||||||||||||| |||| ||| |||||||||||| | | ||||||| ||||||||| ||| ||||    
T  7740635 acttagattatgaaatcacaaagaa-aaaatctaaatctatgtgaaaataatttatttaaattgaaatatagaaaaaa 7740559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 35132959 - 35132796
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||| |||||||||||||||||| | |  | |||| ||| || |||||||| ||  |||||| || ||| ||||||||| ||||||||||||||    
T  35132959 aacaacgccgaacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcacgaa--agaaaaacttgatgtatgtgaaaatcacttatttagat 35132862  T
Q  101 tgaaatagagag--aaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc 164  Q
    | ||| | || |  ||||||||  ||| |  |||||  ||||||| ||||||||||||| ||||||    
T  35132861 taaaagaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaattgacctaaaatcacccc 35132796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 19296884 - 19296830
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  19296884 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 19296830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 30756896 - 30756950
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  30756896 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 30756950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 34899684 - 34899738
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  34899684 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 34899738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 39171671 - 39171721
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||| | |  ||||||||||| |||||||||||    
T  39171671 gcacaagacgacgaacaacaaaacgcagcacttagatgacgaaatcacaaa 39171721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 42978624 - 42978570
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  42978624 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 42978570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 12141386 - 12141439
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||||||| ||||||||| | || |||||||| || |||||||||||    
T  12141386 gccgcacaagacgacaaacaacaaaacgccgcacttagacgacgaaatcacaaa 12141439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 3394480 - 3394428
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa 63  Q
    ||||||||||||||||||| | |||| |||| ||| ||||||||||| |||||    
T  3394480 cacaagacgacgaacaacacaacaccgcactcagacgatgaaatcacgaagaa 3394428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 5e-88; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 10389797 - 10390032
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||    
T  10389797 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaggaa-aaaacctagatctatgtgaaagtcacttatttagat 10389895  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||   | ||||||||||||| ||||    
T  10389896 tgaaatagagagaaaaagatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactataagagaaaacctagaaagag 10389995  T
Q  200 aaaattagggccgacttgttggagagggaggggaaga 236  Q
    |||| |||||||| ||||||||||||||||| |||||    
T  10389996 aaaactagggccggcttgttggagagggaggagaaga 10390032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 56194647 - 56194417
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||    
T  56194647 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaaacctagatctatgtgaaagtcacttatttag 56194548  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca----cccccaatgaagaaacgggatgagaaaacctaga 194  Q
    |||||||||||||||||||||| |||| |  ||||||||||||||||||||||| |||||||    ||| ||||||||||||||||||||||||||||||    
T  56194547 attgaaatagagagaaaaagatgaagaggtttgatttcaggtcaagaattgacccaaaaccaccacccctcaatgaagaaacgggatgagaaaacctaga 56194448  T
Q  195 gagagaaaattagggccgacttgttggagag 225  Q
    |||| ||||||| || || ||||||||||||    
T  56194447 gagaaaaaattaaggtcggcttgttggagag 56194417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 6972856 - 6972620
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacc-tagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | ||||||||| |||||||||||||||||    
T  6972856 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaacatggatctatgtaaaagtcacttatttaga 6972757  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||| ||| |||||||| ||||    ||||||||| ||||||||||||| ||||||||||||||||||||||| ||| || |||||||||||||||    
T  6972756 ttgaaatacagataaaaagatgaagagaggtgatttcagatcaagaattgacccaaaaccacccccaatgaagaaaccggaagaaaaaacctagagagag 6972657  T
Q  200 aaaattagggccgacttgttggagagggaggggaaga 236  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  6972656 aaaattagggccggcttgttggagagggagaggaaga 6972620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 9528920 - 9529150
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacc-tagatctatgtgaaagtcacttatttaga 99  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| | || |||||||||||| |||||||||||||    
T  9528920 aacaacgccgcacaagacgacgaacaacaaaccatcacacttagatgatgaaatcacaaagaaaaaaaacataaatctatgtgaaaatcacttatttaga 9529019  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| ||||||||||||||||| |  ||||||||||||||||||||||| ||||||||||| || ||||||||| | | ||||||||||| |||||    
T  9529020 ttgaaataaagagaaaaagataaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcagtgaagaaactgtaagagaaaacctaaagaga 9529119  T
Q  199 gaaaattagggccgacttgttggagagggag 229  Q
     |||| |||||||||||||||||||||||||    
T  9529120 taaaactagggccgacttgttggagagggag 9529150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 9645592 - 9645816
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  9645592 aacaacgccgcacaagacgacgaacaacacaccaccacacttagatgatgaaatcgcaaagaaaaaaacctagatctatgtgaaagtcacttatttagat 9645691  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||||||| |||||||| |||| |  |||| |||||||||||||||||| ||||| ||||| |||||||||||| | | || ||| |||||||| ||    
T  9645692 tgaaatagagacaaaaagatgaagaggggtgatatcaggtcaagaattgacccaaaacgacccctcaatgaagaaactgtaagataaagcctagagaaag 9645791  T
Q  200 aaaattagggccgacttgttggaga 224  Q
    |||| |||||||| |||||||||||    
T  9645792 aaaactagggccggcttgttggaga 9645816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 25273929 - 25273695
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag---aagaaaacctagatctatgtgaaagtcacttattta 97  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || ||||||||||||||||||||| |||||||||||    
T  25273929 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaaaacctagatctatgtgaaaatcacttattta 25273830  T
Q  98 gattgaaatagagagaaaaagataaagatgaa------tgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacc 190  Q
    ||||||||||||||| ||||||| ||||||||      ||||||||||||||||||||| | ||||||||||| ||||| |||||| | | ||||||| |    
T  25273829 gattgaaatagagag-aaaagatgaagatgaagaggggtgatttcaggtcaagaattgatccaaaaccacccctcaatggagaaactgtaagagaaaatc 25273731  T
Q  191 tagagagagaaaattagggccgacttgttggagagg 226  Q
    ||||||||||||| |||||||| |||||||||||||    
T  25273730 tagagagagaaaactagggccggcttgttggagagg 25273695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 1531954 - 1531725
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||| |||||||||||  |||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||||    
T  1531954 aacaacgccacacaagacgacagacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaaatcacttatttaga 1531855  T
Q  100 ttgaaatagagaga-aaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    |||||||||||||| |||||||||||| |  ||||||||||||||||||||||| || |||||||| |||||||||||| | | ||||||||||||| ||    
T  1531854 ttgaaatagagagagaaaagataaagaggggtgatttcaggtcaagaattgacccaataccacccctcaatgaagaaactgtaagagaaaacctagaaag 1531755  T
Q  198 agaaaattagggccgacttgttggagaggg 227  Q
    |||||| |||| ||| ||||||||||||||    
T  1531754 agaaaactaggaccggcttgttggagaggg 1531725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 43444439 - 43444218
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||    
T  43444439 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaacctagatatatgtgaaaatcacttatttagat 43444340  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||||||| ||||||  ||||||||| |||| |||||||| ||||| ||||| |||||||| ||  | | ||||||||||||||||||    
T  43444339 tgaaataaagagaaaaagatgaagatgggtgatttcagatcaaaaattgacccaaaactacccctcaatgaaggaattgtaagagaaaacctagagagag 43444240  T
Q  200 aaaattagggccgacttgttgg 221  Q
    |||| |||||||| ||||||||    
T  43444239 aaaactagggccggcttgttgg 43444218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 868208 - 867978
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttaga- 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||| | |||||||||||     
T  868208 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaaga--aaaatctagatctatgtgaaaataacttatttagat 868111  T
Q  100 ------ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaaccta 192  Q
          ||||||||||||||||||||| |||| |  |||||||| ||||||||| |||||||||||||||| |||||||||||| ||| |||||||||||    
T  868110 tgaaatttgaaatagagagaaaaagatgaagaggggtgatttcatgtcaagaatcgacctaaaaccacccctcaatgaagaaactggaagagaaaaccta 868011  T
Q  193 gagagagaaaattagggccgacttgttggagag 225  Q
    ||||||||||| |||||||| ||| ||||||||    
T  868010 gagagagaaaactagggccggctttttggagag 867978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 4643904 - 4643683
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||||    
T  4643904 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaa-tcacttatttaga 4643806  T
Q  100 ttgaaatagagagaaaaagataaaga--tgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagaga 196  Q
    ||||||||||||||||||||| ||||   |  |||||||||||||| |||| ||||||||||||||| ||||||||| || | | ||||||||||||| |    
T  4643805 ttgaaatagagagaaaaagatgaagaggggggtgatttcaggtcaaaaattcacctaaaaccacccctcaatgaagagactgtaagagaaaacctagaaa 4643706  T
Q  197 gagaaaattagggccgacttgtt 219  Q
    ||||||| |||||||||||||||    
T  4643705 gagaaaactagggccgacttgtt 4643683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 38706753 - 38706951
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||    
T  38706753 aacaacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctaaatctatgtgaaaatcacttatttagat 38706852  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||||||||||||||| |||| |  |||||| || ||||||||||||| ||||||||||| |||||||||||| | | || ||||||||||||||    
T  38706853 tgaaatagagagaaaaagatgaagaagggtgattttagatcaagaattgacccaaaaccacccctcaatgaagaaacagtaagaaaaaacctagagaga 38706951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 9283957 - 9283728
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||| ||||||||||| ||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||||||||||    
T  9283957 aacaacgccacacaagacgacaaacaacaaatcaccacacttagatgatgaaattacaaataaaaaaacctagatctatgtaaaaatcacttatttagat 9283858  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||| ||| |||| |  ||||||||||| ||| ||||||| ||||||||||| |||||||||||  | | |||| |||||||||||||    
T  9283857 tgaaataaagagaaaacgatgaagaggggtgatttcaggttaagtattgacccaaaaccacccctcaatgaagaaattgtaagagataacctagagagag 9283758  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    |||| |||||||||||||||||||||||||    
T  9283757 aaaactagggccgacttgttggagagggag 9283728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 31381715 - 31381943
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||    
T  31381715 aacaacgctgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacttagatctatgtgaaaatcacttatttaaat 31381813  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||| |||||||||||||| |  | |  ||||||||||||||||||||||| ||||||||||  ||| |||||||| | | ||||||| ||||||||||    
T  31381814 tgaaaaagagagaaaaagatgagaaggggtgatttcaggtcaagaattgacccaaaaccacccatcaacgaagaaaccgtaagagaaaatctagagagag 31381913  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    ||||||||| ||| ||||| | ||||||||    
T  31381914 aaaattaggaccggcttgtggaagagggag 31381943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 37188637 - 37188847
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||  |||||| ||||||||| ||||||||||||||    
T  37188637 aacagcgccgcacaaaacgacgaacaacaaaccaccacacttaaatgatgaaatcacaaagaaaaaa--ctagatatatgtgaaaatcacttatttagat 37188734  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac-ccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||||||| ||||||| |||||||||||||| |||||||| |||||||| || | ||||| || |  || ||||||||||||||||||    
T  37188735 tgaaatatagagaaaaagatgaagatgagtgatttcaggtcaataattgacccaaaaccactcctcgatgaaaaatctagaagagaaaacctagagagag 37188834  T
Q  200 aaaattagggccg 212  Q
    |||| ||||||||    
T  37188835 aaaactagggccg 37188847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 8 - 229
Target Start/End: Original strand, 10359597 - 10359819
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| ||| |||||||||||||| ||||||    
T  10359597 ccgcaaaagacggcgaacaacaaaccaccacacttagatgatgaaatcacgaagaa-aaaacctagatatatgttaaaatcacttatttagatcgaaata 10359695  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagagagaaaatt 205  Q
    ||||||||||||| ||| ||  |||||||||||||| |||||||| |||||||||||  |||||||||||| | | ||||||| ||||||||| ||||||    
T  10359696 gagagaaaaagatgaagttgggtgatttcaggtcaaaaattgacccaaaaccaccccctcaatgaagaaactgaaagagaaaatctagagagaaaaaatt 10359795  T
Q  206 agggccgacttgttggagagggag 229  Q
    | ||||  ||||||||||||||||    
T  10359796 aaggccatcttgttggagagggag 10359819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 51318025 - 51317834
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  51318025 gccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaatcaaaaagaa-aaaacctagatctatgtgaaaatcacttatttagattgaaat 51317927  T
Q  107 agagagaaaaagataaagatgaatgatttcaggtc-aagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||| |||| |||||| ||||||||||||  || |||| || ||||||||    
T  51317926 agagagaaaaagatgaagatgagtgatttcaggtcaaagaattgacccaaaatcacccctcaatgaagaaactagaagagacaatctagagag 51317834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 53616693 - 53616912
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||    
T  53616693 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttaga 53616792  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||| |||||||| ||| ||||    ||||||||||||||||||||||| |||  |||||| ||| |||||||  | | |||||||||||||||||    
T  53616793 ttgaaataaagagaaaacgatgaagagtggtgatttcaggtcaagaattgacccaaagtcacccctcaacgaagaaattgtaagagaaaacctagagaga 53616892  T
Q  199 gaaaattagggccgacttgt 218  Q
    |||||||||||||| |||||    
T  53616893 gaaaattagggccggcttgt 53616912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 12 - 228
Target Start/End: Original strand, 34024491 - 34024707
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||||||||||    
T  34024491 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcaaaaagaa-aaaacctagatctatgtgaaaataacttatttagattgaaatagaga 34024589  T
Q  112 gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggc 210  Q
    ||||||||| |||| |  ||||||||||||||||||||| | ||||||||||| ||||||||||||   | || |||| ||||||||| |||  || | |    
T  34024590 gaaaaagatgaagaggggtgatttcaggtcaagaattgatccaaaaccacccctcaatgaagaaactaaaagaaaaaatctagagagaaaaacctaagac 34024689  T
Q  211 cgacttgttggagaggga 228  Q
    |||||||||| |||||||    
T  34024690 cgacttgttgaagaggga 34024707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 12 - 203
Target Start/End: Complemental strand, 21090187 - 21089995
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 111  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||| |||||||||||||    
T  21090187 acaagacgacgaacaacaaaccaccatatttagatgatgaaatcacgaagaa-aaaacctaaatctatgtgaaaatcacttatttatattgaaatagaga 21090089  T
Q  112 gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagagagaaaa 203  Q
    ||||||||| ||||||| ||||||||| ||||  ||||||| |||||||||||  ||||||||||||  || ||||||||||||||||||||||    
T  21090088 gaaaaagatgaagatgagtgatttcagatcaaagattgacccaaaaccaccccctcaatgaagaaactagaagagaaaacctagagagagaaaa 21089995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 19 - 229
Target Start/End: Original strand, 50766570 - 50766783
Alignment:
Q  19 gacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaag 118  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  50766570 gacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaacttagatctatgtgaaaatcatttatttagattgaaataaagagaaaaag 50766669  T
Q  119 ataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatga--agaaacgggatgagaaaacctagagagagaaaattagggccgact 215  Q
    || |||| | |||||||||| ||||||||||||| ||||||||| | ||||||  |||||  | | ||||||||||||||||| |||| |||||||| ||    
T  50766670 atgaagagggatgatttcagatcaagaattgacccaaaaccacctctcaatgaagagaaattgtaagagaaaacctagagagaaaaaactagggccggct 50766769  T
Q  216 tgttggagagggag 229  Q
    ||||||||||||||    
T  50766770 tgttggagagggag 50766783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 9 - 229
Target Start/End: Original strand, 2115638 - 2115859
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||| |||| |||||||||||| |||||||||||||||||||||    
T  2115638 cgcacaagacgacaaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaata 2115737  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
     |||||||||||| ||||  | |||||||||||||| |||||||| ||||||||||| ||||||| |||  | | || |||| |||||||||||||| ||    
T  2115738 aagagaaaaagatgaagaaaagtgatttcaggtcaataattgacccaaaaccacccctcaatgaataaattgtaagaaaaaatctagagagagaaaacta 2115837  T
Q  207 gggccgacttgttggagagggag 229  Q
       ||||||||||||||||||||    
T  2115838 -aaccgacttgttggagagggag 2115859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 8 - 229
Target Start/End: Complemental strand, 20569294 - 20569069
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa---cctagatctatgtgaaagtcacttatttagattgaa 104  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| | |||||| ||||   ||||||||||||||||| ||| ||||||||||||||    
T  20569294 ccgcagaagacgacgaacaacaaatcaccacacttagatgatgaaattataaagaaaaaaaaaacctagatctatgtgaaaatcatttatttagattgaa 20569195  T
Q  105 atagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaacctagagagagaaaa 203  Q
    ||| ||||||||| || |||| |  ||||||||||| ||||||||||| ||||||||||  |||||||||||    | || ||||||||||| |||||||    
T  20569194 ataaagagaaaaaaatgaagaggggtgatttcaggttaagaattgacccaaaaccacccatcaatgaagaaattatacgaaaaaacctagagggagaaaa 20569095  T
Q  204 ttagggccgacttgttggagagggag 229  Q
     ||| |||| ||||||||||||||||    
T  20569094 ctagagccggcttgttggagagggag 20569069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 6 - 225
Target Start/End: Complemental strand, 2624537 - 2624318
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    |||||||||||||||||||||||| ||||||||||| |  ||| |||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  2624537 cgccgcacaagacgacgaacaacacaccaccacactca--tgacgaaatcacgaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaa 2624440  T
Q  106 taga-gagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaa 203  Q
    ||||  | |||||||| | ||||| | |||||||||||| |||  ||| |||| |||||| |||| |||||||  || ||||||||||||||||| ||||    
T  2624439 tagactataaaaagatgatgatgagttatttcaggtcaaaaatcaacccaaaatcacccctcaataaagaaactagaagagaaaacctagagagaaaaaa 2624340  T
Q  204 ttagggccgacttgttggagag 225  Q
     |||||||| ||||||||||||    
T  2624339 ctagggccggcttgttggagag 2624318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 43154057 - 43154292
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaa-------acctagatctatgtgaaagtcactta 93  Q
    |||| |||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||       |||||||||||||||||| |||||||    
T  43154057 aacaacgccacacaagacgacgaacaacaaaccaccacacttaaatgataaaatcacaaagaaaaaacaaaaaaacctagatctatgtgaaaatcactta 43154156  T
Q  94 tttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaaccta 192  Q
    ||||||||||||||||||| ||||||| |||| |  |||||||| |||||||||||||| ||||||||| | ||||| | |||  | | || ||||||||    
T  43154157 tttagattgaaatagagag-aaaagatgaagaggggtgatttcaagtcaagaattgacccaaaaccacctctcaatggataaattgtaagataaaaccta 43154255  T
Q  193 gagagagaaaattagggccgacttgttggagagggag 229  Q
     |||||||||| ||||||| ||||||||||| |||||    
T  43154256 aagagagaaaactagggccaacttgttggagcgggag 43154292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 8009404 - 8009526
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||||||||    
T  8009404 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaaga--aaaaactagatctatgtgaaaatcacttatttagat 8009501  T
Q  101 tgaaatagagagaaaaagataaaga 125  Q
    |||||||||||||||||||| ||||    
T  8009502 tgaaatagagagaaaaagatgaaga 8009526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 5333660 - 5333807
Alignment:
Q  87 tcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaa 186  Q
    ||||||||||| |||||||||||||||||||||| |||| |  |||||||| ||||| |||||||| ||||||||||| ||||||||||||||| |||||    
T  5333660 tcacttatttatattgaaatagagagaaaaagatgaagaggg-tgatttcatgtcaaaaattgacccaaaaccacccc-aatgaagaaacgggaagagaa 5333757  T
Q  187 aacctagagagagaaaattagggccgacttgttggagagggaggggaaga 236  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  5333758 aacctagagagaaaaaattagggccggcttgttggagagggagaggaaga 5333807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 35261237 - 35261036
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||| |||||||| ||||||| ||||||||||||||||||| ||||||| ||||| |||||||| |||||||||||| ||||||||||||||    
T  35261237 aacaacgccgcagaagacgacaaacaacacaccaccacacttagatgatcaaatcacgaagaa-aaaacctaaatctatgtgaaaatcacttatttagat 35261139  T
Q  101 tgaaatagaga-gaaaaagataaagatg----aatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagag 195  Q
    || |||| ||| ||||||||| |||| |     || |||||||||||| |||||||| |||| ||||| ||||||||||||| || ||||||||||||||    
T  35261138 tgcaataaagaggaaaaagatgaagaggggatgattatttcaggtcaaaaattgacccaaaatcaccctcaatgaagaaacgagaagagaaaacctagag 35261039  T
Q  196 aga 198  Q
    |||    
T  35261038 aga 35261036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 44947458 - 44947230
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag---aagaaaacctagatctatgtgaaagtcacttattta 97  Q
    |||| ||||||||||||| || | |||||||||||||||||||||| ||||||||||||||   || |||||||||||||||| |||| |||||||||||    
T  44947458 aacaacgccgcacaagacaacaaccaacaaaccaccacacttagataatgaaatcacaaagaaaaaaaaaacctagatctatgcgaaaatcacttattta 44947359  T
Q  98 gattgaaatagagagaaaaagataaagatgaa------tgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacc 190  Q
    |||||| | ||||||| | ||| | |||   |      ||||||||||||||||||||||| ||||||||||| |||||||||||| | | ||||||||     
T  44947358 gattgagagagagagagagagagagagagagagagaggtgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagagaaaact 44947259  T
Q  191 tagagagagaaaattagggccgacttgtt 219  Q
    ||||||||||||| |||| ||||||||||    
T  44947258 tagagagagaaaactaggaccgacttgtt 44947230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 35965018 - 35965214
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttaga 99  Q
    |||| |||| |||| |||||||||||||| |||||||||||  ||||| |||||||| || || |||||||||||||||||||||  ||||||||| |||    
T  35965018 aacaacgccacacaggacgacgaacaacacaccaccacactcggatgacgaaatcacgaaaaa-aaaacctagatctatgtgaaaaatcacttattcaga 35965116  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagaga 196  Q
    ||||||||||||||||||||| ||||    ||||||||||| || |||||||| ||||||||||| |||||||||| | ||| |||||||||||||||    
T  35965117 ttgaaatagagagaaaaagatgaagagaggtgatttcaggtaaaaaattgacccaaaaccacccctcaatgaagaatctggaagagaaaacctagaga 35965214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 29965681 - 29965565
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||    
T  29965681 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttaga 29965582  T
Q  100 ttgaaatagagagaaaa 116  Q
    |||||||| ||||||||    
T  29965581 ttgaaataaagagaaaa 29965565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 14183841 - 14183730
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||  ||||||| ||||||||||||||||||||||    
T  14183841 cgcacaagactacgaacaacaaaccaccacacttagatggtgaaatcacaaagaaaaaaacttagatccttgtgaaaatcacttatttagattgaaatag 14183742  T
Q  109 agagaaaaagat 120  Q
    ||||||||||||    
T  14183741 agagaaaaagat 14183730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 12265500 - 12265302
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttaga 99  Q
    |||| ||||||||| |||||||||||||||||| ||||||| ||||||  |||||||  ||| ||||||||||||||||||||||  |||||||||||||    
T  12265500 aacaacgccgcaca-gacgacgaacaacaaaccgccacactcagatgacaaaatcacgtaga-gaaaacctagatctatgtgaaaaatcacttatttaga 12265403  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc--aatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||||| || |||||||| |||| |  |||||||||||||| |||||||| |||| |||||||  ||||||||||   || ||||||||||||||||    
T  12265402 ttgaaatagggataaaaagatgaagaggggtgatttcaggtcaaaaattgaccaaaaatcacccccttaatgaagaaaattgaagagaaaacctagagag 12265303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 18138956 - 18139180
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttaga 99  Q
    |||| |||||||||||||||||||||||| ||||||||||| || ||| |||||||  ||||| ||||||||||| |||||||||  |||||||||||||    
T  18138956 aacaacgccgcacaagacgacgaacaacacaccaccacactcaggtgacgaaatcattaagaa-aaaacctagatgtatgtgaaaaatcacttatttaga 18139054  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacggga-tgagaaaacctagagag 197  Q
    ||||||||||||||||| ||| |||| |  ||||| |||||||| |||| |||||||| |||||| ||||||| ||  || | ||| ||||| ||||||     
T  18139055 ttgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaatttacctaaaatcacccctcaatgaaaaattggaagtga-aaaacttagaga- 18139152  T
Q  198 agaaaattagggccgacttgttggagag 225  Q
    | ||||||||||||||||| ||||||||    
T  18139153 aaaaaattagggccgacttattggagag 18139180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 50 - 228
Target Start/End: Complemental strand, 47416881 - 47416703
Alignment:
Q  50 gaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattg 149  Q
    ||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||| |||| |  |||||||| ||||| |||||    
T  47416881 gaaattacaaagaaaaaaacttagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaagtcaataattg 47416782  T
Q  150 acctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagaggga 228  Q
    ||| |||| |||||| |||||||||||  | | |||||||||||||  || |||| ||||| ||||||||||||||||||    
T  47416781 acccaaaatcacccctcaatgaagaaattgtaagagaaaacctaga-tgaaaaaactagggtcgacttgttggagaggga 47416703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 49126169 - 49126393
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttaga 99  Q
    |||| |||||||||||||||||||||||| ||||||||||| || ||| |||||||  ||||| ||||||||||| |||||||||  |||||||||||||    
T  49126169 aacaacgccgcacaagacgacgaacaacacaccaccacactcaggtgacgaaatcattaagaa-aaaacctagatgtatgtgaaaaatcacttatttaga 49126267  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacggga-tgagaaaacctagagag 197  Q
    ||||||||||||||||| ||| |||| |  ||||| |||||||| |||| |||||||| |||||| ||||||| ||  || | ||| ||||| ||||||     
T  49126268 ttgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaatttacctaaaatcacccctcaatgaaaaattggaagtga-aaaacttagaga- 49126365  T
Q  198 agaaaattagggccgacttgttggagag 225  Q
    | ||||||||||||||||| ||||||||    
T  49126366 aaaaaattagggccgacttattggagag 49126393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 49680577 - 49680459
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag----aagaaaacctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||||||    || |||||||||||| |||||||| |||||||||| |||||||||    
T  49680577 cacaagacgacgaataacaaatcaccacacttagatgatgaaattacaaagaaaaaaaaaaacctagatccatgtgaaaatcacttatttggattgaaat 49680478  T
Q  107 agagagaaaaagataaaga 125  Q
    | |||||||||||| ||||    
T  49680477 aaagagaaaaagatgaaga 49680459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 32952798 - 32952913
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||| |||||||| ||||||| |||| ||||||||||||| |||||||||||||| |||  ||||||||||||||||  ||||||||||  ||||||||    
T  32952798 ccgcataagacgacaaacaacacaccaacacacttagatgacgaaatcacaaagaaaaaa--ctagatctatgtgaaaaacacttatttaatttgaaata 32952895  T
Q  108 gagagaaaaagataaaga 125  Q
    ||||||||||||| ||||    
T  32952896 gagagaaaaagatgaaga 32952913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 46991173 - 46991287
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||| || |||||||| ||||||| ||||||||||| ||||||  ||||||  ||||| |||| |||||||||||||||| ||||| ||||||||    
T  46991173 aacaacgccacagaagacgacaaacaacacaccaccacactcagatgacaaaatcatgaagaaaaaaatctagatctatgtgaaaatcactcatttagat 46991272  T
Q  101 tgaaatagagagaaa 115  Q
    |||||||||||||||    
T  46991273 tgaaatagagagaaa 46991287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 12 - 217
Target Start/End: Original strand, 1931770 - 1931963
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 111  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||| | ||||||||            |||    
T  1931770 acaagacggtgaacaacacaccactacacttagatgatgaaatcacaatgaa-aaaacctagatctttgtgaaaataacttattt------------aga 1931856  T
Q  112 gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagagagaaaattagggc 210  Q
    ||||||||| ||||||| ||||||||||| ||  |||||||  |||||||| | ||||||||||||  || ||||||||||| ||||| |||| ||| ||    
T  1931857 gaaaaagatgaagatgagtgatttcaggttaaatattgacccgaaaccacctctcaatgaagaaactagaagagaaaacctaaagagaaaaaactagagc 1931956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 27593952 - 27594091
Alignment:
Q  72 agatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatga 170  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||| |||| |  |||||||| ||||| ||||||||||||| |||||  ||||||    
T  27593952 agatctatgtgaaactcgcttatttagattgaaatatagagaaaaagatgaaga-gggtgatttcatgtcaaaaattgacctaaaatcacccatcaatga 27594050  T
Q  171 agaaacgggatgagaaaacctagagagagaaaattagggccg 212  Q
    || ||  ||| ||||||||||||||||  |||| ||||||||    
T  27594051 ag-aagtggaagagaaaacctagagaggaaaaactagggccg 27594091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 29965568 - 29965493
Alignment:
Q  154 aaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagaggga 228  Q
    ||||||||||| ||||||| |||  | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  29965568 aaaaccacccctcaatgaaaaaattgtaagagaaaacctagagagagaaaattagggccgacttgttggagaggga 29965493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 106
Target Start/End: Original strand, 3336207 - 3336304
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaat 106  Q
    ||||||| |||||||||||||| ||||||||||| ||||||  ||||||| ||||| |||||||||||  |||||||| | |||| |||||||||||||    
T  3336207 ccgcacaggacgacgaacaacacaccaccacactcagatgacaaaatcacgaagaa-aaaacctagatagatgtgaaaataacttgtttagattgaaat 3336304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 87 - 157
Target Start/End: Original strand, 5333588 - 5333658
Alignment:
Q  87 tcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaa 157  Q
    ||||||||||| |||||||||||||||||||||| ||||||  |||||||||||||| |||||||| ||||    
T  5333588 tcacttatttatattgaaatagagagaaaaagatgaagatgtgtgatttcaggtcaaaaattgacccaaaa 5333658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 50179696 - 50179598
Alignment:
Q  122 aagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgtt 219  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||| | | ||||||| |||||||||||||| || || |||||||||    
T  50179696 aagatgagtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaactatggtcgacttgtt 50179598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 52 - 143
Target Start/End: Complemental strand, 1008289 - 1008199
Alignment:
Q  52 aatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaa 143  Q
    |||||| ||||| ||||| || || ||||||||| ||||||||||||||| ||||||||||||||||||  |||||| |||||||| |||||    
T  1008289 aatcacgaagaaaaaaac-taaatttatgtgaaaatcacttatttagattaaaatagagagaaaaagatgcagatgagtgatttcaagtcaa 1008199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 143
Target Start/End: Original strand, 35351250 - 35351345
Alignment:
Q  47 gatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaa 143  Q
    |||||||||||  |||| ||||||||||||||||||||  ||||||||||| ||||||||| || ||||| ||| ||||||  ||||||| ||||||    
T  35351250 gatgaaatcacgtagaa-aaaacctagatctatgtgaatatcacttatttaaattgaaataaagcgaaaaggatgaagatgtgtgatttctggtcaa 35351345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 47417708 - 47417657
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaa 52  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||||||||    
T  47417708 aacaacgccgcacaagacgacgaacaacaaatcaccacatttagatgatgaa 47417657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 220
Target Start/End: Original strand, 21554901 - 21555075
Alignment:
Q  50 gaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaa---gaa 146  Q
    |||||||||||||| || | |||||| ||||||||| |||||||||| || ||||||| | | |||||||| ||||||  ||||||||||| ||    ||    
T  21554901 gaaatcacaaagaa-aatatctagatttatgtgaaaatcacttatttcgaatgaaataaatataaaaagattaagatgcgtgatttcaggtaaaaacaaa 21554999  T
Q  147 ttgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttg 220  Q
    ||||   |||||||||||  |||||||||||  ||| |||||||  ||  |||||||||||||||  |||||||||    
T  21555000 ttgatacaaaaccaccccctcaatgaagaaaatggaagagaaaaattaatgagagaaaattagggttgacttgttg 21555075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 21405486 - 21405437
Alignment:
Q  74 atctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaa 123  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  21405486 atctatgtgaaaatcacttaattagattgaaatagagaggaaaagataaa 21405437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 135
Target Start/End: Original strand, 43353611 - 43353735
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 110  Q
    ||||||||||||||||||| |   || |||  ||| || |||||||| ||||| |||||| | ||| |||| ||| | ||||||||| ||| ||||||||    
T  43353611 cacaagacgacgaacaacataaagccgcaccgagacgacgaaatcacgaagaaaaaaacccatatcaatgtaaaaattacttatttaaattaaaatagag 43353710  T
Q  111 agaaaaagataaagatgaatgattt 135  Q
    | ||||||||||| || ||||||||    
T  43353711 ataaaaagataaaaataaatgattt 43353735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 188
Target Start/End: Original strand, 3338816 - 3338894
Alignment:
Q  111 agaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaa 188  Q
    |||||||||| |||||  ||||||| ||||||| |||||||| ||||||||| | |||||||||||| ||| |||||||    
T  3338816 agaaaaagatgaagattgatgattttaggtcaaaaattgacccaaaaccacctctcaatgaagaaactggaagagaaaa 3338894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 32766546 - 32766492
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | |||| |||||||| || |||||||||||    
T  32766546 cgccgcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaa 32766492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28857436 - 28857377
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||| ||||||||||||| |||||||||| | | || |||||||| ||||||||||||||    
T  28857436 aacaacgccgcacaagacaacgaacaacacaacgccgcacttagacgatgaaatcacaaa 28857377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 29961002 - 29961049
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaat 54  Q
    ||||||||||||||||||||||| | | ||||||||||| ||||||||    
T  29961002 gccgcacaagacgacgaacaacacaaccccacacttagacgatgaaat 29961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 43
Target Start/End: Original strand, 45228091 - 45228126
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacactta 43  Q
    |||||||||||| |||||||||||||||||||||||    
T  45228091 ccgcacaagacggcgaacaacaaaccaccacactta 45228126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 117
Target Start/End: Original strand, 49072873 - 49072916
Alignment:
Q  74 atctatgtgaaagtcacttatttagattgaaatagagagaaaaa 117  Q
    |||||||||||| |||||||| |||||||||||| |||||||||    
T  49072873 atctatgtgaaaatcacttatatagattgaaataaagagaaaaa 49072916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 4142832 - 4142886
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  4142832 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 4142886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 11300072 - 11300122
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||| | |||| |||||||| || |||||||||||    
T  11300072 gcacaagacgacgaacaacacaacaccgcacttagacgacgaaatcacaaa 11300122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 22611215 - 22611161
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  22611215 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 22611161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 27593878 - 27593932
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa 63  Q
    ||||||||| ||||||||||| ||||||||||| |||| | |||||||| |||||    
T  27593878 cgcacaagatgacgaacaacacaccaccacactcagataacgaaatcacgaagaa 27593932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 35348339 - 35348285
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  35348339 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 35348285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 53811060 - 53811006
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||||| | || || |||||||| ||||| |||||    
T  53811060 cgccgcacaagacgacgaacaacaaaacgccgcatttagatgacgaaatgacaaa 53811006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 56040723 - 56040777
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||||| | || |||||| | || |||||||||||    
T  56040723 cgccgcacaagacgacgaacaacaaaacgccgcacttaaacgacgaaatcacaaa 56040777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 56156719 - 56156773
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||| ||||||||||||||||||| | | ||||||||||| || |||||||||||    
T  56156719 cgccacacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaa 56156773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 2520811 - 2520755
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaac--caccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| ||  |||| |||||||| || |||||||||||    
T  2520811 cgccgcacaagacgacgaacaacacacaacaccgcacttagacgacgaaatcacaaa 2520755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 21365178 - 21365275
Alignment:
Q  41 ttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttca 137  Q
    ||||| || |||||||| ||||| ||||  |||||| ||||| |||  |||||||||| ||| |||| ||||||||||||||||| || || ||||||    
T  21365178 ttagacgacgaaatcacgaagaaaaaaaatctagatatatgtcaaaaccacttatttatattaaaatggagagaaaaagataaaggtggataatttca 21365275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 26633749 - 26633802
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  26633749 gccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 26633802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49410269 - 49410232
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccac 38  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  49410269 aacaacgctgcacaagacgacgaacaacaaaccaccac 49410232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 26123245 - 26123193
Alignment:
Q  65 aaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaa 117  Q
    ||||||||| ||||||  ||| ||||||||||| ||||||||||||| |||||    
T  26123245 aaaacctaggtctatgaaaaactcacttatttaaattgaaatagagaaaaaaa 26123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 20 - 60
Target Start/End: Complemental strand, 47158245 - 47158205
Alignment:
Q  20 acgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||| |||| ||||||||||| |||||||||||    
T  47158245 acgaacaacaaaacacctcacttagatgacgaaatcacaaa 47158205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 52097992 - 52098123
Alignment:
Q  31 accaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttagattgaaatagagagaaaaagataaagatga- 128  Q
    |||||||||||  |||||  ||||||| |||| |||||  ||| |||||| ||||  |||||||||||||||||||||| ||||||| ||| || || |     
T  52097992 accaccacactcggatgacaaaatcacgaaga-gaaaatttagttctatgcgaaaaatcacttatttagattgaaatagggagaaaaggatgaacataag 52098090  T
Q  129 atgatttcaggtcaagaattgacctaaaaccac 161  Q
     ||||||||  |||| |||||| ||||||||||    
T  52098091 gtgatttcaaatcaaaaattgatctaaaaccac 52098123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 4e-82; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 8 - 229
Target Start/End: Complemental strand, 4172591 - 4172369
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  4172591 ccgcacaagacgacgaaaaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaata 4172492  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
    ||||||||||||| |||||| ||||||| | || ||||||||||| ||||||||||| |||||||||||| | | || |||| |||||||||||||| ||    
T  4172491 gagagaaaaagatgaagatggatgattttatgttaagaattgacccaaaaccacccctcaatgaagaaacagtaagaaaaaatctagagagagaaaacta 4172392  T
Q  207 gggccgacttgttggagagggag 229  Q
    |||||||||||||||||||||||    
T  4172391 gggccgacttgttggagagggag 4172369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 4178596 - 4178367
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| |||||| ||| ||||| ||||||||||||||    
T  4178596 aacaacgccgcacaagacgatgaaaaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaagctagatttatctgaaaatcacttatttagat 4178497  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| ||||||  |||||| |||||||||||||||| ||||||||||| |||||||||||| | | || |||||||||||||||    
T  4178496 tgaaatagagagaaaaagatgaagatgggtgattttaggtcaagaattgacccaaaaccacccctcaatgaagaaacagtaagaaaaaacctagagagag 4178397  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    |||| |||||||||||||||||||||||||    
T  4178396 aaaactagggccgacttgttggagagggag 4178367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 46934666 - 46934438
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  46934666 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaacaagaa-aaaacctggatctatgtgaaaatcacttatttagattgaaata 46934568  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
    |||||| |||||| |||| |  |||||||||||||| |||||||| ||||||||||| |||||||||||   || |||||||||||||||||||||||||    
T  46934567 gagagagaaagatgaagaggggtgatttcaggtcaaaaattgaccaaaaaccacccctcaatgaagaaagtagaagagaaaacctagagagagaaaatta 46934468  T
Q  207 gggccgacttgttggagagggaggggaaga 236  Q
    ||||||||||||||||||| |||| |||||    
T  46934467 gggccgacttgttggagagtgaggagaaga 46934438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 25162467 - 25162242
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  25162467 aacaacgccgcacaagacgacgaacaacaaactaccacacttagatgatgaaatcacaaagaaaaaaacctagatctatgtgaaa-tcacttatttagat 25162369  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| ||||||  ||||||||  ||||||||||||  ||||||||||| || ||||||||| | | ||||||||||||||||||    
T  25162368 tgaaatagagagaaaaagatgaagatgggtgatttcaaatcaagaattgacacaaaaccacccctcagtgaagaaactgtaagagaaaacctagagagag 25162269  T
Q  200 aaaattagggccgacttgttggagagg 226  Q
    |||| ||| ||||  ||||||||||||    
T  25162268 aaaactagagccggtttgttggagagg 25162242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 36906153 - 36905927
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||| ||    
T  36906153 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaacctaaatctatgtgaaaatcacttatttatat 36906054  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||| |||||||||||| |||| |  ||||||||||||||||||||||| ||||||| ||  |||||||||||  | | ||||||||||||||||||    
T  36906053 tgaaataaagagaaaaagatgaagaagggtgatttcaggtcaagaattgacccaaaaccatccatcaatgaagaaattgtaagagaaaacctagagagag 36905954  T
Q  200 aaaattagggccgacttgttggagagg 226  Q
    |||||||||||||||||||| ||||||    
T  36905953 aaaattagggccgacttgttagagagg 36905927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 25631569 - 25631773
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttaga 99  Q
    |||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||    
T  25631569 aacaacgccgcacaagacggagaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttaga 25631668  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||||||||||||||||||||  ||| | ||||||| ||||||| |||||||| ||||||||||| |||||||||||  | | |||||||||||||||||    
T  25631669 ttgaaatagagagaaaaagatggagagggatgattttaggtcaaaaattgacccaaaaccacccctcaatgaagaaatagtaagagaaaacctagagaga 25631768  T
Q  199 gaaaa 203  Q
    |||||    
T  25631769 gaaaa 25631773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 29503493 - 29503275
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||    
T  29503493 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaatcaattatttagat 29503395  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagaga 198  Q
    ||||||| ||||||||| || ||||||  ||||||||||||||||||||||| |||| ||||||  | ||||| || |  || |||||||| |||| |||    
T  29503394 tgaaatatagagaaaaatatgaagatgggtgatttcaggtcaagaattgacccaaaatcaccccctcgatgaaaaatctagaagagaaaacttagaaaga 29503295  T
Q  199 gaaaattagggccgacttgt 218  Q
    ||||| |||||||| |||||    
T  29503294 gaaaactagggccggcttgt 29503275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 32607500 - 32607271
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||| ||||||||||||||||||||| |||||||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||||||    
T  32607500 aacaacgccacacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttaga 32607401  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc--caatgaagaaacgggatgagaaaacctagagag 197  Q
    |||||||| |||||||| ||| |||| |  | ||||||||||||||||||||| |||||||||||  |||||||||||  | | ||||||| ||||||||    
T  32607400 ttgaaataaagagaaaatgatgaagaggggt-atttcaggtcaagaattgacccaaaaccaccccctcaatgaagaaattgtaagagaaaatctagagag 32607302  T
Q  198 agaaaattagggccgacttgttggagaggga 228  Q
    |||||| |||||||| |||||||||||||||    
T  32607301 agaaaactagggccggcttgttggagaggga 32607271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 12 - 225
Target Start/End: Original strand, 39917451 - 39917664
Alignment:
Q  12 acaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagaga 111  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  39917451 acaagacaacgaacaacaaaccaccacacttagatgatgaaatcacaaggaa-aaaacctagatctatgtgaaaatcacttatttagattgaattagaga 39917549  T
Q  112 gaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccac-ccccaatgaagaaacgggatgagaaaacctagagagagaaaattagggc 210  Q
    |||||| || |||||| |||||||||||||||||||||||| |||||||| || || ||||||||| | | | |||||||||||||||||||| || |||    
T  39917550 gaaaaatatgaagatggatgatttcaggtcaagaattgacccaaaaccactcctcagtgaagaaactgtaagggaaaacctagagagagaaaactaaggc 39917649  T
Q  211 cgacttgttggagag 225  Q
     |  |||||||||||    
T  39917650 tggtttgttggagag 39917664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 9 - 229
Target Start/End: Original strand, 44907449 - 44907670
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa-cctagatctatgtgaaagtcacttatttagattgaaata 107  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||| ||||||||||||||||| |||||| ||||||||||||||    
T  44907449 cgcacaagacgacgaacaacaaatcaccacacttagatgatgaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttgtttagattgaaata 44907548  T
Q  108 gagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaatta 206  Q
     |||||||||||| |||| |  ||||||||||||||||||||||| ||||||||||| ||| |||||||  | | |||||||||||||||||||||| ||    
T  44907549 aagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccctcaaagaagaaattgtaggagaaaacctagagagagaaaacta 44907648  T
Q  207 gggccgacttgttggagagggag 229  Q
     |||||  |||||||||||||||    
T  44907649 -ggccggtttgttggagagggag 44907670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 17237836 - 17237670
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||||||| ||||||||||||    
T  17237836 aacaacgccgcacaagacgacaaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttatttag 17237737  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc 165  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||    
T  17237736 attgaaatagagagaaacagatgaagatgaatgattttaggtcaagaattgacctagaaccaccccc 17237670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 38855079 - 38855308
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaag-aagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||| |||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||||||||||| |||||||||||||    
T  38855079 aacaacgccacacaagacaacgaacaacaaaccatcacacttagatgatgaaatcacaaagaaaaaaaatctagatctatgtgaaaatcacttatttaga 38855178  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    |||| |||||||||||||||| |||| |  ||||||  ||||||||| ||||| ||||||||||| |||||||||||  | | |||||||||||||||||    
T  38855179 ttgatatagagagaaaaagatgaagaggggtgattttcggtcaagaa-tgacccaaaaccacccctcaatgaagaaatagtaagagaaaacctagagaga 38855277  T
Q  199 gaaaattagggccgacttgttggagagggag 229  Q
    ||||| ||||| || ||||||||||||||||    
T  38855278 gaaaactagggtcggcttgttggagagggag 38855308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 51202297 - 51202520
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||       ||||||    
T  51202297 aacaacgccgcacaagacgacaaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaaacctagatctatgtgaaa-------atttag 51202389  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagag 197  Q
    ||||||||||||||||||| || ||||||  ||||||||||||||||||||||| |||| |||||| |||| ||||||| | | ||||||||||| ||||    
T  51202390 attgaaatagagagaaaaatatgaagatgggtgatttcaggtcaagaattgacccaaaatcacccctcaataaagaaactgtaagagaaaacctaaagag 51202489  T
Q  198 agaaaattagggccgacttgttggagaggga 228  Q
    | |||| || |||||||||||||||||||||    
T  51202490 aaaaaactaaggccgacttgttggagaggga 51202520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 38440634 - 38440844
Alignment:
Q  14 aagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaga 113  Q
    ||||||||||||||||||||||||||||| ||| ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  38440634 aagacgacgaacaacaaaccaccacactttgatcatgaaatcaaaaagaa-aaaacctagatctatgtgaaaatcacttatttagattgaaatagagaga 38440732  T
Q  114 aaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagagagaaaattagggccg 212  Q
    |||||||||||| || ||||||||||||||||||||||  |||||||||   |||||||||||| | |  |||||    | ||||||||||||| |||||    
T  38440733 aaaagataaagaggagtgatttcaggtcaagaattgactcaaaaccaccattcaatgaagaaactgta-aagaaa----atagagagaaaattaaggccg 38440827  T
Q  213 acttgttggagagggag 229  Q
    |||||||||||||||||    
T  38440828 acttgttggagagggag 38440844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 49552267 - 49552469
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||    
T  49552267 aacaacgccgcacaagacgacgaacaacaaaccaccacatttagatgatgaaatcacaaagaa-aaaacctagattaatgtgaaattcacttatttagat 49552365  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgag-aaaacctagagaga 198  Q
    ||||||||||| |||| ||| |||| |  ||||||||||||||||||||||| ||||||||||  |||||||||||| ||| ||| |||||||| |||||    
T  49552366 tgaaatagagaaaaaatgatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccatcaatgaagaaac-ggaagagaaaaacctaaagaga 49552464  T
Q  199 gaaaa 203  Q
    |||||    
T  49552465 gaaaa 49552469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 3850556 - 3850731
Alignment:
Q  59 aagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaac 158  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |  ||||||||||||||||||||| | |||||    
T  3850556 aagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgatccaaaac 3850655  T
Q  159 cacccccaatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagagggaggggaaga 236  Q
    |||||||||| |||||| ||||||||||||| |  |||||||||||||||| || ||||||||||||| || ||||||    
T  3850656 cacccccaataaagaaatgggatgagaaaactt--agagagaaaattagggtcggcttgttggagaggaagaggaaga 3850731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 2342523 - 2342295
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||| ||||||||||||||    
T  2342523 aacaacgccgcactagacaacgaataacaaaccaccacacttagatgatgaaatcacaaagaaaaaaatatagatatatgtgaaaatcacttatttagat 2342424  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    |||||||||||||||||||| |||| |  ||| |||||||  |||||||||| ||||||||||| ||| |||||||| | | ||||||||||| | | |     
T  2342423 tgaaatagagagaaaaagatgaagagggttga-ttcaggtttagaattgacccaaaaccacccctcaacgaagaaactgtaagagaaaacctataaaaaa 2342325  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    ||||||||||||| ||| ||||||||||||    
T  2342324 aaaattagggccggcttattggagagggag 2342295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 12116129 - 12115898
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaac-caccacacttagatgatgaaatcacaaagaagaaaa---cctagatctatgtgaaagtcacttattt 96  Q
    |||| ||||||||||||| ||||||||||||  |||||||||||||| ||||||| |||||||| ||||   ||||||||| ||||||| ||||||||||    
T  12116129 aacaacgccgcacaagacaacgaacaacaaaatcaccacacttagataatgaaattacaaagaaaaaaaaaacctagatctttgtgaaaatcacttattt 12116030  T
Q  97 agattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagag 195  Q
    ||||||||||| |||| ||||||| ||||   |||||||||||||||||||||||  ||||||||||| |||||||||||  | |  |||||||||||||    
T  12116029 agattgaaataaagaggaaaagatgaagagagatgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaattgtaaaagaaaacctagag 12115930  T
Q  196 agagaaaattagggccgacttgttggagaggg 227  Q
    |||||||| ||| |||||||||||||||||||    
T  12115929 agagaaaactagagccgacttgttggagaggg 12115898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 6 - 229
Target Start/End: Original strand, 50611465 - 50611689
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    ||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  50611465 cgccgcataagacgacgaacaataaaccatcacacttagatgatgaaatcacaaagaaaaaaacctagatctatatgaaaatcacttatttagattgaaa 50611564  T
Q  106 tagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaacca-cccccaatgaagaaacgggatgagaaaacctagagagagaaaat 204  Q
    || |||||||||||| |||| |  |||||| ||||||| |||||||| ||||||| | | ||||||||||||   | |||||||| || ||||| ||||     
T  50611565 tatagagaaaaagatgaagaggggtgattttaggtcaataattgacccaaaaccatctctcaatgaagaaacaataagagaaaacttaaagagaaaaaac 50611664  T
Q  205 tagggccgacttgttggagagggag 229  Q
    ||| |||| ||| ||||||||||||    
T  50611665 tagagccggcttattggagagggag 50611689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 35499241 - 35499470
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa---cctagatctatgtgaaagtcacttattta 97  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||   ||||||||||||||||| |||||||||||    
T  35499241 aacaacgccgcacaagacgacgaacaacaaatcaccacacttagataatgaaattacaaagaaaaaaaaaacctagatctatgtgaaaatcacttattta 35499340  T
Q  98 gattgaaatagagagaaaaagataaaga-tgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagag 195  Q
    |||||||||| |||||||||||| ||||  |  ||||||||||| || |||||||| ||||||||||| ||||||||||   | |  ||||||  |||||    
T  35499341 gattgaaataaagagaaaaagatgaagagggggtgatttcaggtaaaaaattgaccaaaaaccacccctcaatgaagaatttgtaaaagaaaatttagag 35499440  T
Q  196 agagaaaattagggccgacttgttggagag 225  Q
     |||||||||| | ||||||| ||||||||    
T  35499441 ggagaaaattaagaccgacttattggagag 35499470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 42719548 - 42719406
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    ||||||||||||||  ||||| ||||||||||| ||    
T  42719548 aacaacgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaactcacata----aaaacctagatctacatgaaaatcacttatttaaat 42719453  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaat 147  Q
    ||||||||||||||||| |  ||||||| ||||||||||||||||||    
T  42719452 tgaaatagagagaaaaatacgaagatgagtgatttcaggtcaagaat 42719406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 22803053 - 22802887
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttaga 99  Q
    |||| ||||||| |||||||||||||||||||| ||||||| | |||| |||| |||| ||| ||||||||||||||| ||||||  |||||||||||||    
T  22803053 aacaacgccgcataagacgacgaacaacaaaccgccacactcaaatgacgaaagcacataga-gaaaacctagatctacgtgaaaaatcacttatttaga 22802955  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaa 167  Q
    ||||||||||||||||||||| |||| || |||||||| ||||| |||||||| |||| |||||||||    
T  22802954 ttgaaatagagagaaaaagatgaagaggagtgatttcatgtcaaaaattgacccaaaatcacccccaa 22802887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 8 - 99
Target Start/End: Original strand, 30648769 - 30648860
Alignment:
Q  8 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttaga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  30648769 ccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaactagatctatgtgaaagtcacttatttaga 30648860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 14464541 - 14464377
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||| | |||| |||  ||||| ||||||||||||| ||||||||||||||||| ||||  | ||||||||||||||| ||||||||||||    
T  14464541 aacaacgccgcacgaaacgatgaatgacaaatcaccacacttagaagatgaaatcacaaagaaaaaaaaacttagatctatgtgaaaatcacttatttag 14464442  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc 163  Q
    ||||||||| |||||||||||| || | |  ||||||||||||||||||||||| ||||||||||    
T  14464441 attgaaataaagagaaaaagatgaataggggtgatttcaggtcaagaattgacccaaaaccaccc 14464377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 10 - 162
Target Start/End: Complemental strand, 46178599 - 46178447
Alignment:
Q  10 gcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagt-cacttatttagattgaaatag 108  Q
    |||||||| ||||||||| | |||||||||||  || || |||||||| ||||| |||||||||||||||||||||   ||||||||||||||||| |||    
T  46178599 gcacaagatgacgaacaatacaccaccacactcggaagacgaaatcacgaagaa-aaaacctagatctatgtgaaaaagcacttatttagattgaattag 46178501  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc 162  Q
    |||||||||||| |||| | ||||||||||||||  |||||||| |||||||||    
T  46178500 agagaaaaagatgaagagggatgatttcaggtcataaattgacccaaaaccacc 46178447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 30648917 - 30649010
Alignment:
Q  136 caggtcaagaattgacctaaaa-ccacccccaatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagagggag 229  Q
    |||||||| |||||||| |||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  30648917 caggtcaaaaattgacccaaaaaccacccccaatgaagaaacggaa-gagaaaacctagagagataaaattagggccgacttgttggagatggag 30649010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 47980711 - 47980919
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttagattgaa 104  Q
    ||||||| ||||||| |||||||||||||||||| |   |||| |||||||| || || || |||||||| |||||||||  ||||||||||||||||||    
T  47980711 cgccgcataagacgatgaacaacaaaccaccacaatcgaatgacgaaatcacgaataa-aagacctagatttatgtgaaaaatcacttatttagattgaa 47980809  T
Q  105 atagagagaaaa----agataaagatgaa-tgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagaga 198  Q
    || ||  ||||     ||| |||||| || |||||||||||||| |||||||| ||||||||| | |||||||||||| | | ||||||||||||| |||    
T  47980810 atggattgaaattgagagaaaaagataaagtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga 47980909  T
Q  199 gaaaattaggg 209  Q
     ||||||||||    
T  47980910 -aaaattaggg 47980919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 47989998 - 47990206
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttagattgaa 104  Q
    ||||||| ||||||| |||||||||||||||||| |   |||| |||||||| || || || |||||||| |||||||||  ||||||||||||||||||    
T  47989998 cgccgcataagacgatgaacaacaaaccaccacaatcgaatgacgaaatcacgaataa-aagacctagatttatgtgaaaaatcacttatttagattgaa 47990096  T
Q  105 atagagagaaaa----agataaagatgaa-tgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagaga 198  Q
    || ||  ||||     ||| |||||| || |||||||||||||| |||||||| ||||||||| | |||||||||||| | | ||||||||||||| |||    
T  47990097 atggattgaaattgagagaaaaagataaagtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga 47990196  T
Q  199 gaaaattaggg 209  Q
     ||||||||||    
T  47990197 -aaaattaggg 47990206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 47999285 - 47999493
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttagattgaa 104  Q
    ||||||| ||||||| |||||||||||||||||| |   |||| |||||||| || || || |||||||| |||||||||  ||||||||||||||||||    
T  47999285 cgccgcataagacgatgaacaacaaaccaccacaatcgaatgacgaaatcacgaataa-aagacctagatttatgtgaaaaatcacttatttagattgaa 47999383  T
Q  105 atagagagaaaa----agataaagatgaa-tgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagaga 198  Q
    || ||  ||||     ||| |||||| || |||||||||||||| |||||||| ||||||||| | |||||||||||| | | ||||||||||||| |||    
T  47999384 atggattgaaattgagagaaaaagataaagtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga 47999483  T
Q  199 gaaaattaggg 209  Q
     ||||||||||    
T  47999484 -aaaattaggg 47999493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 6 - 209
Target Start/End: Original strand, 48008572 - 48008780
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttagattgaa 104  Q
    ||||||| ||||||| |||||||||||||||||| |   |||| |||||||| || || || |||||||| |||||||||  ||||||||||||||||||    
T  48008572 cgccgcataagacgatgaacaacaaaccaccacaatcgaatgacgaaatcacgaataa-aagacctagatttatgtgaaaaatcacttatttagattgaa 48008670  T
Q  105 atagagagaaaa----agataaagatgaa-tgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgagaaaacctagagaga 198  Q
    || ||  ||||     ||| |||||| || |||||||||||||| |||||||| ||||||||| | |||||||||||| | | ||||||||||||| |||    
T  48008671 atggattgaaattgagagaaaaagataaagtgatttcaggtcaaaaattgacccaaaaccaccactcaatgaagaaactgcaagagaaaacctagacaga 48008770  T
Q  199 gaaaattaggg 209  Q
     ||||||||||    
T  48008771 -aaaattaggg 48008780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 151
Target Start/End: Complemental strand, 21488073 - 21487993
Alignment:
Q  71 tagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgac 151  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||   |||||||||||||| |||||||    
T  21488073 tagatctacgtgaaagtcacttatttagattgaaatggagagaaaaagatgaagattggtgatttcaggtcaaaaattgac 21487993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 37169262 - 37169062
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttaga 99  Q
    |||| ||| ||||||||||||| |||||| |||| ||||||  | ||| |||||||  ||||| |||| ||||||||||||||||  ||||||||||| |    
T  37169262 aacaacgctgcacaagacgacggacaacagaccatcacactcgggtgacgaaatcaagaagaa-aaaatctagatctatgtgaaaaatcacttatttata 37169164  T
Q  100 ttgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    ||||| ||||||||||||| | ||||    ||||||||||| || |||||| | |||| |||||| ||||||||||||    ||| ||||||||||||||    
T  37169163 ttgaattagagagaaaaaggtgaagagaggtgatttcaggtaaaaaattgatccaaaatcacccctcaatgaagaaac---ttgaaaaaacctagagaga 37169067  T
Q  199 gaaaa 203  Q
     ||||    
T  37169066 aaaaa 37169062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 3848962 - 3849019
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaca 58  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  3848962 aacaacgccgcacaagacgacgaacaacaaaccaccacacttacatgatgaaatcaca 3849019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 229
Target Start/End: Complemental strand, 25849782 - 25849624
Alignment:
Q  71 tagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatg 169  Q
    ||||||||||||||  |||||||| |  ||||||||||| |||||||||  || | |  |||||||| ||||| |||||||  ||||||||||| ||||     
T  25849782 tagatctatgtgaacatcacttatctgaattgaaatagaaagaaaaagacgaataagggtgatttcaagtcaaaaattgactcaaaaccacccctcaatt 25849683  T
Q  170 aagaaacgggatgagaaaacctagagagagaaaattagggccgacttgttggagagggag 229  Q
    ||||| | ||| || |||||||||||||| |||| |||||||| ||| ||||||||||||    
T  25849682 aagaagctggaagaaaaaacctagagaga-aaaactagggccggcttattggagagggag 25849624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 31794102 - 31793920
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||| ||||||||||||| ||||| ||||| ||||||  ||||||| | |||||         ||||||||||| ||||||||||||||    
T  31794102 aacaacgccgcacaaaacgacgaacaacacaccactacactcagatgacaaaatcacgaggaaga---------tctatgtgaaaatcacttatttagat 31794012  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccc-ccaatgaagaaacgggatgagaaaaccta 192  Q
    ||||||||||| |||| || |||||   ||||||| |||| || || ||||  ||||||||||  |||| ||||||| ||| |||||||||||    
T  31794011 tgaaatagagaaaaaatgacaaagagagatgatttaaggttaa-aaatgactcaaaaccacccgtcaataaagaaactggaagagaaaaccta 31793920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 87 - 194
Target Start/End: Original strand, 36735281 - 36735389
Alignment:
Q  87 tcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacc-cccaatgaagaaacgggatgaga 185  Q
    ||||||||||| ||||||||| ||||| ||| || |||| | |||||||||||| || |||||||| ||||||||| | ||||||||||||  || ||||    
T  36735281 tcacttatttaaattgaaatatagagagaaaaatgaagagggatgatttcaggtaaaaaattgaccaaaaaccacctctcaatgaagaaactagaagaga 36735380  T
Q  186 aaacctaga 194  Q
    |||| ||||    
T  36735381 aaacttaga 36735389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 115
Target Start/End: Complemental strand, 30829995 - 30829892
Alignment:
Q  11 cacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagag 110  Q
    ||||| ||||| ||||||| | |  |||||| ||||||||||||||| | ||| | ||||||||||||||| ||| || || |||| |||||||||||||    
T  30829995 cacaaaacgacaaacaacacaacgtcacactcagatgatgaaatcacgatgaa-acaacctagatctatgtcaaaatccctcatttggattgaaatagag 30829897  T
Q  111 agaaa 115  Q
    |||||    
T  30829896 agaaa 30829892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 54378923 - 54378798
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaag-tcacttatttagattgaaata 107  Q
    ||||||||||||||||  ||| | ||||||||| || |||  ||||||| ||||| |||   |||||||| ||||||  ||||| ||||||||||||||     
T  54378923 cgcacaagacgacgaaatacacatcaccacactcaggtgacaaaatcacgaagaaaaaat--tagatctacgtgaaaaatcactcatttagattgaaatg 54378826  T
Q  108 gagagaaaaagataaagatgaatgattt 135  Q
    |||||||||| || ||||| ||||||||    
T  54378825 gagagaaaaatattaagataaatgattt 54378798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 36734735 - 36734802
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa 68  Q
    |||| |||||||||||||||||||||||| |||| |||| || ||||| |||||||| ||||| ||||    
T  36734735 aacaacgccgcacaagacgacgaacaacacaccatcacatttggatgacgaaatcacgaagaaaaaaa 36734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 20465047 - 20465101
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||| |||||||||||||||||| | |||| |||||||| ||||||||||||||    
T  20465047 cgccgtacaagacgacgaacaacacaacacctcacttagacgatgaaatcacaaa 20465101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 43488667 - 43488721
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | ||||||||||| || |||||||||||    
T  43488667 cgccgcacaagacgacgaacaacacaacgccacacttagacgacgaaatcacaaa 43488721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 6910754 - 6910802
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac 57  Q
    ||||||| |||||||| || | |||||||||||||||||||||||||||    
T  6910754 cgcacaaaacgacgaataatataccaccacacttagatgatgaaatcac 6910802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21488122 - 21488078
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttaga 45  Q
    |||| |||||||||||||||| ||||||| |||||||||||||||    
T  21488122 aacaacgccgcacaagacgacaaacaacataccaccacacttaga 21488078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29239356 - 29239300
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcac 57  Q
    ||||||||||||||||||||||||||||| | | || |||| ||| |||||||||||    
T  29239356 aacagcgccgcacaagacgacgaacaacacaacgccgcactcagacgatgaaatcac 29239300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 105
Target Start/End: Complemental strand, 51923731 - 51923634
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    |||||||||||| ||||||||||| | |  |||||| ||| || |||||||| ||  |||||| || |||  |||||||| |||||||||||||||||||    
T  51923731 cgccgcacaagatgacgaacaacacaacgtcacactaagacgacgaaatcacgaa--agaaaaacttgatgcatgtgaaaatcacttatttagattgaaa 51923634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 9998478 - 9998424
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  9998478 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 9998424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 10108247 - 10108193
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  10108247 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 10108193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 10233081 - 10233027
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  10233081 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 10233027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 12050725 - 12050779
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||||| | || | |||||| || |||||||||||    
T  12050725 cgccgcacaagacgacgaacaacaaaacgccgcgcttagacgacgaaatcacaaa 12050779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 105
Target Start/End: Original strand, 20608977 - 20609074
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    ||||||||||||||| ||||||| | | || || ||||| || ||||||||||| | ||||| || ||| ||||| |||  ||||||||||||||||||    
T  20608977 gccgcacaagacgactaacaacacaacgccgcaattagacgacgaaatcacaaa-aggaaaaacttgatatatgttaaaaccacttatttagattgaaa 20609074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 36461508 - 36461562
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  36461508 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 36461562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 38860197 - 38860251
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||||| |  | |||||||| || |||||||||||    
T  38860197 cgccgcacaagacgacgaacaacaaaacgtcgcacttagacgacgaaatcacaaa 38860251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 40487336 - 40487282
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||||    
T  40487336 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcacaaa 40487282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 26970376 - 26970331
Alignment:
Q  182 gagaaaacctagagagagaaaattagggccgacttgttggagaggg 227  Q
    ||||||||||||||||| |||| |||||  ||||||||||||||||    
T  26970376 gagaaaacctagagagaaaaaactagggttgacttgttggagaggg 26970331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 31271885 - 31271938
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    ||||||||||||||||||||||| |  ||| |||||||| || |||||||||||    
T  31271885 gccgcacaagacgacgaacaacacaaaaccgcacttagacgaagaaatcacaaa 31271938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 29
Target Start/End: Complemental strand, 8914721 - 8914693
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaaca 29  Q
    |||||||||||||||||||||||||||||    
T  8914721 aacagcgccgcacaagacgacgaacaaca 8914693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 33579812 - 33579772
Alignment:
Q  65 aaaacctagatctatgtgaaagtcacttatttagattgaaa 105  Q
    |||| |||||| ||||||||| |||||||||||||||||||    
T  33579812 aaaaactagatatatgtgaaaatcacttatttagattgaaa 33579772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 40556723 - 40556671
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcaca 58  Q
    |||||||||||||||||||||||| | | || |||||||| || |||||||||    
T  40556723 cgccgcacaagacgacgaacaacacaacgccgcacttagacgacgaaatcaca 40556671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 53706416 - 53706484
Alignment:
Q  89 acttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaa 157  Q
    ||||||||| ||||||||||||| |||| || |||||| |  ||||| | ||||| |||||||||||||    
T  53706416 acttatttaaattgaaatagagataaaatgacaaagataagcgattttatgtcaaaaattgacctaaaa 53706484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 5432 - 5212
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||    
T  5432 aacaacgccgcacaagacgacgaacaacaaaccatcacacttaaatgatgaaatcacaaagaaaaaaacatagatatatgtaaaagtcacttatttagat 5333  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacgggatgagaaaacctagagagaga 200  Q
    |||| |||||||| |||||| |||| |  ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    ||||    
T  5332 tgaagtagagagagaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccacccccaatgaagaaacgggaagagaaaaccta----gaga 5237  T
Q  201 aaattagggccgacttgttggagag 225  Q
    | |||||||||| ||||||||||||    
T  5236 agattagggccggcttgttggagag 5212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 16363 - 16529
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa--cctagatctatgtgaaagtcacttatttag 98  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||| |||||||||||| ||||||||||||    
T  16363 aacaacgccgcacaagacgacaaacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttatttag 16462  T
Q  99 attgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccaccccc 165  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||||||||| ||||||||||    
T  16463 attgaaatagagagaaacagatgaagatgaatgattttaggtcaagaattgacctagaaccaccccc 16529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 8731 - 8556
Alignment:
Q  23 aacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataa 122  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |    
T  8731 aacaacaaaccaccacacttagatgatgaaatcacaaagaa-aaaacctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatga 8633  T
Q  123 agatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagaga 198  Q
    | | |  |||||||| || ||||||| ||| ||||||||||| |||||||||||| ||| |||||||||| ||||||    
T  8632 aaaggggtgatttcaagttaagaattaacccaaaaccacccctcaatgaagaaactggaagagaaaacctggagaga 8556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 361842 - 362066
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||   || ||||||||  ||||||||||| | ||||||||||||    
T  361842 aacaacgccgcacaagacgacgaacaacaaaccaccatacttaaatgatgaaatcaca---aaaaaaacctaactctatgtgaaaattacttatttagat 361938  T
Q  101 tgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagag 199  Q
    ||||||  ||||||||||||  ||| |  ||||||||||||||||||||||  ||||||||||| |||||||||||| | | ||||||||||| ||||||    
T  361939 tgaaat--agagaaaaagatggagaggggtgatttcaggtcaagaattgactcaaaaccacccctcaatgaagaaactgtaagagaaaacctaaagagag 362036  T
Q  200 aaaattagggccgacttgttggagagggag 229  Q
    |||| || ||||| ||||||| || |||||    
T  362037 aaaactaaggccggcttgttgaagggggag 362066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 78 - 229
Target Start/End: Complemental strand, 6295 - 6144
Alignment:
Q  78 atgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccccaatgaagaaacg 177  Q
    |||||||| |||||||||||||||| |||||||| |||||||| |||| |  |||||| ||||||||||||||||| ||||||||| ||||||||||||     
T  6295 atgtgaaaatcacttatttagattggaatagagaaaaaaagatgaagaggggtgattttaggtcaagaattgacctgaaaccaccctcaatgaagaaact 6196  T
Q  178 ggatgagaaaacctagagagagaaaattagggccgacttgttggagagggag 229  Q
    ||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  6195 ggaagagaaaacctaaagagagaaaattagggccggcttattggagagggag 6144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 6333 - 6293
Alignment:
Q  7 gccgcacaagacgacgaacaacaaaccaccacacttagatg 47  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  6333 gccgtacaagacgacgaacaacaaaccaccacactaagatg 6293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 201415 - 201533
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||    
T  201415 aacagcgccgcacaagactacgaacaacaaaccatcacacttagatgatgaaatcacaaagaa-aaaatctagatctatgtgaaaatcacttatttagat 201513  T
Q  101 tgaaatagagagaaaaagat 120  Q
    ||||||| ||||||||||||    
T  201514 tgaaatatagagaaaaagat 201533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 189
Target Start/End: Original strand, 20447 - 20624
Alignment:
Q  9 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagattgaaatag 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | || || |||| | | |||||| ||||| |||||||||||||||  |||||    
T  20447 cgcacaagacgacgaacaacaaaccaccacacttagatgatgaaat--ctaaaaaaaaaagccaaatctatatgaaaatcacttatttagatt-taatag 20543  T
Q  109 agagaaaaagataaagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaac 189  Q
    || ||||||||| |  |||  |||||||||||||| |||||||| ||||||||||| | ||||||||||  || ||||||||    
T  20544 agtgaaaaagatgacaatgggtgatttcaggtcaaaaattgacc-aaaaccacccctcgatgaagaaacttgaagagaaaac 20624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 122 - 219
Target Start/End: Complemental strand, 155 - 57
Alignment:
Q  122 aagatgaatgatttcaggtcaagaattgacctaaaaccacccc-caatgaagaaacgggatgagaaaacctagagagagaaaattagggccgacttgtt 219  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||| ||||| |||||| | | ||||||| |||||||||||||| || || |||||||||    
T  155 aagatgagtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagagagaaaactatggtcgacttgtt 57  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 83500 - 83545
Alignment:
Q  23 aacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  83500 aacaacaaaccaccacacttagatgatgaaatcacaaagaaaaaaa 83545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 453966 - 453851
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| |||||| ||||||||||||||||| |||| |||| | | || | |||||||| ||||| ||||| || || ||||||||| ||||||||||| ||    
T  453966 aacaacgccgcccaagacgacgaacaacacaccatcacaatcaaataacgaaatcacgaagaa-aaaacgtaaatatatgtgaaaatcacttatttaaat 453868  T
Q  101 tgaaatagagagaaaaa 117  Q
    | ||||| |||||||||    
T  453867 taaaataaagagaaaaa 453851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 15503 - 15449
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||| | |||| ||||||||||| |||||||||||    
T  15503 cgccgcacaagacgacgaacaacacaacaccgcacttagatgacgaaatcacaaa 15449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 32824 - 32878
Alignment:
Q  6 cgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaa 60  Q
    |||||||||||||||||||||||||| | || |||||||| || |||||||||||    
T  32824 cgccgcacaagacgacgaacaacaaaacgccgcacttagacgacgaaatcacaaa 32878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 1757 - 1859
Alignment:
Q  1 aacagcgccgcacaagacgacgaacaacaaaccaccacacttagatgatgaaatcacaaagaagaaaacctagatctatgtgaaagtcacttatttagat 100  Q
    |||| ||||| |||||||||||||||||| | |  | |||| ||| || |||||||| ||  |||||| || ||| ||||||||| ||||||||||||||    
T  1757 aacaacgccggacaagacgacgaacaacagaacgtcgcactaagacgacgaaatcacgaa--agaaaaacttgatgtatgtgaaaatcacttatttagat 1854  T
Q  101 tgaaa 105  Q
    |||||    
T  1855 tgaaa 1859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 9702 - 9799
Alignment:
Q  41 ttagatgatgaaatcacaaagaagaaaac-ctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagataaagatgaatgatttca 137  Q
    ||||| || |||||||| ||||| ||||  |||||| ||||| |||  |||||||||| ||| |||| ||||||||||||||||| || || ||||||    
T  9702 ttagacgacgaaatcacgaagaaaaaaaatctagatatatgtcaaaaccacttatttatattaaaatggagagaaaaagataaaggtggataatttca 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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