View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11391_low_14 (Length: 435)
Name: NF11391_low_14
Description: NF11391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11391_low_14 |
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Alignment Details
Target: chr5 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 15 - 416
Target Start/End: Original strand, 22047004 - 22047403
Alignment:
| Q |
15 |
tggacatcaagggcaaaatgattgtcaccaaggtatgtcattaaaagaagtttgttaccattaatttcaaataattgtctcaattcaatccatcctttag |
114 |
Q |
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|||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |
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| T |
22047004 |
tggacatcaaggccaaaacgattgtcaccaaggtatgtcattaaaagaagtttgttaccattaattccaaataattgtctcaattcagtccatcctttag |
22047103 |
T |
|
| Q |
115 |
tgattagaggaaaatgaaaacttaagttgaaatcgacatcctttgtgttgcctctcctatcgatgatagttaatcttagaccaagctcataataatgttc |
214 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22047104 |
tgattagaggaaaatgaaaacttaagttgaaatccacatcctatgt--tgcctctcctatcgatgatagttaatcttagaccaagctcataataatgttc |
22047201 |
T |
|
| Q |
215 |
tttaacaaatttagtgtcgaactctccatatggctgcaacatgcaaatgtaagttgattttaatatgaggatgtatatgatcgaaatgtaactacataaa |
314 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22047202 |
tttaacaaatttagggtcgaactctccatatggctgcaacatgcaaatgtaagttggttttaatatgaggatgtatatgatcgaaatgtaactacataaa |
22047301 |
T |
|
| Q |
315 |
ttcaatgtacatgatgtaaaaagataaatactttattgtggtaaaagagaatgaacatgaatcaacctatggtttcaatatatcaaagtgtaagtgtagt |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22047302 |
ttcaatgtacatgatgtaaaaagataaatactttattgtggtaaaagagaatgaacatgaatcaacctatggtttcaatatatcaaagtgtaagtgtagt |
22047401 |
T |
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