View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11391_low_39 (Length: 247)
Name: NF11391_low_39
Description: NF11391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11391_low_39 |
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Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 8202269 - 8202039
Alignment:
| Q |
1 |
ttatcaaattcacaagagcaagaaaaaactggatcatagattaaaaatattgctgacctttttcctacaggtatcagtccgagttttgatcacatgaaac |
100 |
Q |
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| T |
8202269 |
ttatcaaattcacaagagcaagaaaaaactggatcatagattaaaaatattgctgacctttttcctacaggtatcagtccgagttttgatcacatgaaac |
8202170 |
T |
|
| Q |
101 |
tgtgaaacagaatgcaacaaaaacacaacatgacagcatattagcttaaagactaaaaggaataaccgaataactgaatttacaagtgtaatcattgcta |
200 |
Q |
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| T |
8202169 |
tgtgaaacagaatgcaacaaaaacacaacatgacagcatattagcttaaagactaaaaggaataaccgaataactgaatttacaagtgtaatcattgcta |
8202070 |
T |
|
| Q |
201 |
agtgatgacgattcatttcataagaagaata |
231 |
Q |
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| T |
8202069 |
agtgatgacgattcatttcataagaagaata |
8202039 |
T |
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