View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11393_high_4 (Length: 244)
Name: NF11393_high_4
Description: NF11393
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11393_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 11527237 - 11527007
Alignment:
| Q |
1 |
ttctatccaaatgtggatgaaattctaatagacagaggtagaagaatagctattgacttaaactattaagaaggatttgggtttgctattttaaaagatt |
100 |
Q |
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| T |
11527237 |
ttctatccaaatgtggatgaaattctaatagacagaggtagaagaatagctattgacttaaactattaagaaggatttgggtttgctattttaaaagatt |
11527138 |
T |
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| Q |
101 |
tatcatcaatcttgatatatgtatgatatgtcataatggtgttgcttaatctctaactaacctcatttagcaatgaaaaattagttgaatatatattttt |
200 |
Q |
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| T |
11527137 |
tatcatcaatcttgatatatgtatgatatgtcataatggtgttgcttaatctctaactaacctcatttagcaatgaaaaattagtagaatatatatttct |
11527038 |
T |
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| Q |
201 |
gttcatgtttacctgtaatatgtagtgatgt |
231 |
Q |
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| T |
11527037 |
gttcacgcttacctgtaatatgtagtgatgt |
11527007 |
T |
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