View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11394_low_1 (Length: 670)

Name: NF11394_low_1
Description: NF11394
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11394_low_1
NF11394_low_1
[»] chr2 (26 HSPs)
chr2 (11-670)||(41086475-41087123)
chr2 (46-663)||(37770356-37770972)
chr2 (32-602)||(10173271-10173849)
chr2 (250-662)||(1269234-1269659)
chr2 (32-373)||(34230251-34230590)
chr2 (49-359)||(7696029-7696333)
chr2 (11-175)||(4974990-4975155)
chr2 (11-175)||(4992898-4993063)
chr2 (372-577)||(14106561-14106768)
chr2 (411-652)||(17105173-17105416)
chr2 (372-541)||(7874165-7874335)
chr2 (91-199)||(12343041-12343147)
chr2 (284-511)||(13337177-13337415)
chr2 (11-110)||(13337561-13337660)
chr2 (99-359)||(16952143-16952398)
chr2 (99-359)||(17022808-17023063)
chr2 (99-359)||(17060114-17060369)
chr2 (12-175)||(41113412-41113573)
chr2 (14-126)||(29139624-29139736)
chr2 (372-541)||(39338902-39339074)
chr2 (49-138)||(29997228-29997317)
chr2 (372-541)||(10523969-10524141)
chr2 (46-88)||(4472276-4472318)
chr2 (45-79)||(16952049-16952083)
chr2 (45-79)||(17022714-17022748)
chr2 (92-136)||(13699056-13699100)
[»] chr6 (11 HSPs)
chr6 (11-670)||(20701468-20702140)
chr6 (117-661)||(3880372-3880912)
chr6 (11-139)||(15120273-15120402)
chr6 (447-599)||(15132636-15132788)
chr6 (300-359)||(15120553-15120612)
chr6 (285-359)||(13423532-13423606)
chr6 (20-136)||(6860317-6860434)
chr6 (487-561)||(13423447-13423520)
chr6 (372-541)||(3117364-3117537)
chr6 (11-89)||(3880283-3880361)
chr6 (99-151)||(16180675-16180727)
[»] chr5 (25 HSPs)
chr5 (11-637)||(8297245-8297880)
chr5 (11-647)||(26045634-26046278)
chr5 (49-663)||(14302153-14302760)
chr5 (20-658)||(13953928-13954557)
chr5 (11-356)||(25992076-25992411)
chr5 (211-650)||(7195109-7195557)
chr5 (125-497)||(33258665-33259046)
chr5 (14-320)||(26405222-26405521)
chr5 (252-515)||(7391944-7392213)
chr5 (20-192)||(33109882-33110050)
chr5 (47-139)||(7195008-7195100)
chr5 (32-139)||(30097614-30097722)
chr5 (285-358)||(21402778-21402851)
chr5 (20-139)||(7682835-7682954)
chr5 (11-177)||(10174924-10175089)
chr5 (50-115)||(37108105-37108170)
chr5 (372-541)||(18593115-18593287)
chr5 (70-136)||(7403669-7403734)
chr5 (372-541)||(698233-698405)
chr5 (372-436)||(39024487-39024551)
chr5 (372-539)||(34377972-34378142)
chr5 (372-430)||(39184224-39184282)
chr5 (258-334)||(17853981-17854056)
chr5 (13-88)||(27713405-27713481)
chr5 (287-354)||(39024385-39024453)
[»] chr7 (32 HSPs)
chr7 (11-654)||(42532930-42533574)
chr7 (153-654)||(8744913-8745422)
chr7 (49-647)||(1320562-1321166)
chr7 (21-492)||(24324479-24324957)
chr7 (372-653)||(16954414-16954697)
chr7 (142-663)||(6716539-6717060)
chr7 (49-603)||(3478164-3478721)
chr7 (372-577)||(16828973-16829180)
chr7 (14-161)||(16954749-16954895)
chr7 (11-228)||(33719160-33719375)
chr7 (379-547)||(44755494-44755663)
chr7 (14-166)||(16828774-16828926)
chr7 (372-541)||(33434982-33435153)
chr7 (373-541)||(38306133-38306304)
chr7 (599-651)||(16829183-16829235)
chr7 (269-357)||(44755657-44755745)
chr7 (19-129)||(39013534-39013644)
chr7 (372-510)||(34389866-34390006)
chr7 (11-65)||(6726090-6726144)
chr7 (265-334)||(23983298-23983367)
chr7 (99-199)||(23983427-23983526)
chr7 (92-139)||(28534281-28534328)
chr7 (70-139)||(6492860-6492930)
chr7 (372-430)||(13311825-13311883)
chr7 (372-430)||(22568149-22568207)
chr7 (32-82)||(36674809-36674859)
chr7 (295-352)||(9107234-9107291)
chr7 (125-186)||(36674726-36674786)
chr7 (18-83)||(44755906-44755970)
chr7 (99-139)||(22567889-22567929)
chr7 (611-647)||(33434877-33434913)
chr7 (285-360)||(38485620-38485695)
[»] scaffold0050 (1 HSPs)
scaffold0050 (11-663)||(36456-37117)
[»] chr4 (25 HSPs)
chr4 (104-663)||(22810925-22811490)
chr4 (92-643)||(25752942-25753502)
chr4 (20-359)||(16832700-16833036)
chr4 (48-354)||(41117676-41117977)
chr4 (102-359)||(48098399-48098651)
chr4 (250-531)||(53823326-53823619)
chr4 (102-354)||(49528143-49528390)
chr4 (20-359)||(49747593-49747929)
chr4 (55-354)||(38636948-38637243)
chr4 (372-599)||(31050699-31050927)
chr4 (300-511)||(39420969-39421191)
chr4 (49-177)||(19311075-19311203)
chr4 (99-334)||(19814978-19815210)
chr4 (284-357)||(2061678-2061751)
chr4 (76-177)||(52009083-52009184)
chr4 (451-650)||(38639526-38639727)
chr4 (97-654)||(19672861-19673425)
chr4 (50-134)||(2061542-2061627)
chr4 (14-89)||(25754207-25754282)
chr4 (47-199)||(39420743-39420895)
chr4 (70-129)||(53823152-53823212)
chr4 (12-83)||(42719494-42719565)
chr4 (20-82)||(48098645-48098707)
chr4 (48-80)||(46487621-46487653)
chr4 (407-469)||(48098278-48098342)
[»] chr8 (17 HSPs)
chr8 (21-663)||(10248246-10248881)
chr8 (213-652)||(17656872-17657324)
chr8 (12-199)||(17656408-17656596)
chr8 (46-215)||(12197781-12197949)
chr8 (46-215)||(12442209-12442377)
chr8 (263-359)||(12197987-12198084)
chr8 (263-359)||(12442415-12442512)
chr8 (371-541)||(34389041-34389214)
chr8 (49-135)||(8862330-8862418)
chr8 (376-541)||(32066336-32066504)
chr8 (372-541)||(37986895-37987067)
chr8 (372-452)||(31207399-31207479)
chr8 (372-541)||(9519371-9519543)
chr8 (372-541)||(24995432-24995604)
chr8 (100-198)||(43312399-43312497)
chr8 (372-469)||(15821416-15821514)
chr8 (51-175)||(22325808-22325931)
[»] chr3 (26 HSPs)
chr3 (11-654)||(25647443-25648093)
chr3 (95-663)||(37123142-37123707)
chr3 (11-662)||(14193690-14194340)
chr3 (125-598)||(14755047-14755528)
chr3 (412-663)||(4464013-4464266)
chr3 (49-356)||(28937431-28937726)
chr3 (12-254)||(41039332-41039566)
chr3 (153-357)||(14879504-14879705)
chr3 (11-199)||(4170967-4171154)
chr3 (11-199)||(50518760-50518945)
chr3 (20-352)||(33143632-33143956)
chr3 (21-139)||(48893034-48893152)
chr3 (372-510)||(23328387-23328526)
chr3 (49-137)||(14280258-14280345)
chr3 (372-547)||(19176369-19176546)
chr3 (40-199)||(12086463-12086623)
chr3 (372-510)||(40023609-40023748)
chr3 (102-178)||(4463862-4463936)
chr3 (114-235)||(7105032-7105148)
chr3 (372-561)||(34475791-34475983)
chr3 (285-359)||(27399024-27399099)
chr3 (11-89)||(14893262-14893340)
chr3 (285-359)||(1652827-1652901)
chr3 (372-430)||(14879421-14879479)
chr3 (372-541)||(20611655-20611827)
chr3 (99-199)||(25594308-25594406)
[»] scaffold0063 (2 HSPs)
scaffold0063 (12-552)||(57989-58537)
scaffold0063 (622-663)||(57945-57985)
[»] scaffold0119 (1 HSPs)
scaffold0119 (250-662)||(42043-42468)
[»] scaffold0200 (1 HSPs)
scaffold0200 (250-629)||(19167-19559)
[»] chr1 (37 HSPs)
chr1 (20-235)||(11439700-11439913)
chr1 (20-493)||(27102111-27102583)
chr1 (49-359)||(34774937-34775244)
chr1 (131-510)||(9313097-9313466)
chr1 (59-356)||(31290740-31291031)
chr1 (250-585)||(16147384-16147733)
chr1 (490-662)||(10785489-10785656)
chr1 (23-359)||(10785144-10785474)
chr1 (49-199)||(32882588-32882739)
chr1 (20-246)||(46768360-46768578)
chr1 (372-541)||(7857527-7857697)
chr1 (475-654)||(6583333-6583511)
chr1 (484-619)||(52278293-52278428)
chr1 (49-199)||(16148997-16149148)
chr1 (250-430)||(6583122-6583311)
chr1 (372-559)||(46692856-46693046)
chr1 (372-541)||(24658803-24658973)
chr1 (372-577)||(17033423-17033630)
chr1 (285-589)||(32864502-32864819)
chr1 (57-139)||(6582968-6583051)
chr1 (11-98)||(9313011-9313098)
chr1 (372-510)||(46814504-46814643)
chr1 (32-161)||(46603623-46603750)
chr1 (410-515)||(34774771-34774877)
chr1 (372-577)||(38544775-38544981)
chr1 (372-507)||(31585797-31585935)
chr1 (258-319)||(16577367-16577428)
chr1 (11-87)||(9557241-9557317)
chr1 (618-654)||(27102060-27102096)
chr1 (372-541)||(41920325-41920496)
chr1 (11-78)||(37200485-37200552)
chr1 (278-359)||(19598702-19598783)
chr1 (611-660)||(7857405-7857454)
chr1 (372-538)||(24449967-24450136)
chr1 (47-88)||(38546890-38546931)
chr1 (285-360)||(4651844-4651919)
chr1 (595-663)||(9313487-9313555)
[»] scaffold1384 (1 HSPs)
scaffold1384 (49-197)||(1360-1513)
[»] scaffold1613 (1 HSPs)
scaffold1613 (372-577)||(1054-1260)


Alignment Details
Target: chr2 (Bit Score: 414; Significance: 0; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 11 - 670
Target Start/End: Original strand, 41086475 - 41087123
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||| |||| || |||||||| |||||||||||  |||||||||||||||        
T  41086475 cagagaccagtgaaactgagcatacaaagaaaaagcatcgtatataggcgaaacacccgaaaataaataccctaaaaacacccctgaagacaacac---- 41086570  T
Q  111 caaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactc---aagccccaa 207  Q
              |||||||||||||||||||| ||| | ||||||||||||| |||||| |||||||||||| |||||||||||||||||   |  ||||||    
T  41086571 ----------gtcaccacctaaaacagaccccttaacgaaagcgaccactctaaaaacgatatccaataccacccatcgtcactactcctcaccccccaa 41086660  T
Q  208 agaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccac 307  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||| |||||||||||||| | ||||||||    
T  41086661 agaaaaaacacccctcaaaatcaaactcgcaatcctgaaactccaaagtagagtcacatccaaaaagctcttatccgaaagatcattcagcttccaccac 41086760  T
Q  308 ctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaactatccaaagagctgatctcgaatcaaaagtgattgaccgaccatactat 407  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  41086761 ctctcgacctccgatccaccgaaaggaaccataaaaagcccaaaaccaaactatccaaagagctgatctcgaatcaaaagtgattgacccaccagactat 41086860  T
Q  408 atgaccaaatcagaagggcaccctcacccctggtacactagagaacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagc 507  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | ||||||||||| ||||| |||| ||||    
T  41086861 atgaccaaatcagaagggcaccctcacccctggtacaccagagaacaccaaatcacgccaaacaaaattgtagctggacaccgattcccgatctcaaagc 41086960  T
Q  508 aaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggttta 607  Q
    ||| |||||||  |||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||    
T  41086961 aaaagtaatcggtccaccggaaacctgcacacaacaagtaggacaaacgacaagataagcggtagtgcaagcaacaaacagatcaataggaaaaggctta 41087060  T
Q  608 gctcaacgggacccgctacctccaaacaccctaaacaccttaacaactccaaaaaatgcatac 670  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||    
T  41087061 gctcaacgggacccgctacctccaaacaccctagacaccttaacaaccccaaaaaacgcatac 41087123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 46 - 663
Target Start/End: Original strand, 37770356 - 37770972
Alignment:
Q  46 cgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttc 145  Q
    |||||||||||||||||||| || |||||||||||||||||||| ||| ||| || | ||||||||||||  ||||||||||||||||||||||  ||||    
T  37770356 cgtcgtatataggcggaacacccgaaaataaacaccctaaaaac-accatgaggataccacccaccaaaatccacgtcaccacctaaaacagactccttc 37770454  T
Q  146 atgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctga 245  Q
    | |||| | |||||| |||        ||||| || |||| ||||||||||||   ||||||||||||||| ||||||||||| |||||||||  |||||    
T  37770455 acgaaaaccaccactataa--------tccaacaccacccgtcgtcactactcgc-ccccaaagaaaaaac-cccctcaaaattaaactcacagacctga 37770544  T
Q  246 aactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaag 345  Q
    | | ||||||| |||| || ||  |||||||| |||  ||||||||||||| | |||| |||||||||||||||| | || ||||||||||||||||| |    
T  37770545 a-caccaaagccgagccacctcagaaaagctcatatctgaaagatcattcagcttccaacacctctcgacctccgattcaccgaaagaaaccataaaa-g 37770642  T
Q  346 cccaaaaccaaact--atccaaagag-------ctgatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacc 435  Q
    |||||||||||| |  ||| |||||        ||||||  |||||||||||||| | || |||| ||  || |||||||||||| |||||||| |||||    
T  37770643 cccaaaaccaaaattgatctaaagaattgactcctgatccagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccctcacc 37770742  T
Q  436 cctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccag 534  Q
    |  ||||||| |||||| ||| ||||| |||||||   ||||||  || |||||| ||||||| |||||||||||| |||| || |||||||| ||||||    
T  37770743 ctcggtacaccagagaaacactaaatcgcgccaaatcgaattgctgctagacaccaactcccgatctcgaagcaaaagtaaccggcccaccgataaccag 37770842  T
Q  535 cacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaac 634  Q
    || |||| ||| | ||||||||||||||||   |||||||||| |||| || ||||||| ||||| | | | | | ||||  |||||  | |||||||||    
T  37770843 caaacaaaaagcatgacaaacgacaagatatacggtggtgcaaacaacgaataaatcaaaaggaagaagctcaacacaacatgacccatttcctccaaac 37770942  T
Q  635 accct-aaacaccttaacaactccaaaaaa 663  Q
    ||||| ||||||||||||||| ||||||||    
T  37770943 accctaaaacaccttaacaaccccaaaaaa 37770972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 32 - 602
Target Start/End: Original strand, 10173271 - 10173849
Alignment:
Q  32 atacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactacc-ctgaagacaacacccaccaaaaaacacgtcaccacct 130  Q
    |||||||  |||| ||| |||||||||||||||| |  ||||||||||||||||||  |||| |||| ||||| ||||| ||||| ||| |||||  |||    
T  10173271 atacaaactaaaagcgttgtatataggcggaacacctgaaaataaacaccctaaaagatacctctgaggacaatacccatcaaaatacatgtcacggcct 10173370  T
Q  131 aaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatca 230  Q
    ||||||||| ||||||||||| |||| |||||||||| ||||| ||| || || |||||||||||||||  ||||||||    || || ||||||||| |    
T  10173371 aaaacagacgtcttcatgaaaacgactactgtaaaaacgatatacaacaccactcatcgtcactactca--ccccaaag----aatactcctcaaaatta 10173464  T
Q  231 aactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaa 330  Q
    ||||| || ||||  ||| ||||||| |||| |||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||| | || ||||    
T  10173465 aactctcagtcct-caacaccaaagctgagccacatccgaaaagctcatattcaaaagatcattcaacttccaccacctctcgacctccgattcaccgaa 10173563  T
Q  331 agaa-accataaaaagcccaaaaccaaact--atccaaagagct-------gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcag 420  Q
    |||| ||||  |||||||||||||||||||  | ||||| | ||       |||||||||||||||||||| | || || | ||| || ||||||| ||     
T  10173564 agaacaccaacaaaagcccaaaaccaaacttgagccaaataacttacttccgatctcgaatcaaaagtgatcggcccactagactttaggaccaaaacaa 10173663  T
Q  421 aagggcaccc-tcacccctggtacactagag-aacacc-aaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatc 517  Q
    ||| |||||| ||||| ||||||||| |||| ||||||   |||| |||||| || |||||| || |||||||||| ||| || |||| |||| |||| |    
T  10173664 aagagcacccttcacctctggtacaccagagaaacaccgttatcaagccaaacaagattgcagctagacaccgacttccgatcccgaaacaaaagtaacc 10173763  T
Q  518 gccccaccgaaaaccagcacacaacaagtaggac-aaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaag 602  Q
      | ||||| ||||||  |||||| || || ||| |||||||| |||| | |||||||||| | ||||||||||||| ||||||||    
T  10173764 agcacaccggaaaccaatacacaataaataagacaaaacgacatgatatgcggtggtgcaaaccacaaacaaatcaaaaggaaaag 10173849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 250 - 662
Target Start/End: Complemental strand, 1269659 - 1269234
Alignment:
Q  250 ccaaagcagagcaacatccaaaaagctcttattcgaaa-gatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagccc 348  Q
    |||||||||||| |||| | |||||||| ||| ||||| ||| ||||| | ||||||| ||||||||||||| ||||  ||||||||||||||||| |||    
T  1269659 ccaaagcagagccacattcgaaaagctcctatccgaaaagattattcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaaatccc 1269560  T
Q  349 aaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccct 438  Q
    |||||||||||  | ||||||| ||||       |||||||||||||||||| | || |||| ||| || ||| ||||||||||||||||| |||||  |    
T  1269559 aaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcaccttt 1269460  T
Q  439 ggtacactagagaa-caccaaatcacgccaaagaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagca 536  Q
    |||| || |||||| || ||||| | ||||||  || | |||| || |||| ||||||||| ||||||||||||  ||| || |||| ||  ||||||||    
T  1269459 ggtataccagagaaacatcaaattaagccaaaacaagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagca 1269360  T
Q  537 cacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaacac 636  Q
     ||||  |||| ||||||||||| ||||  ||||||||||| ||||||||| ||| | ||||||||| ||||||||| | || | ||| |||||||||||    
T  1269359 tacaaacagtaagacaaacgacatgatagatggtggtgcaaacaacaaacatatccaaaggaaaaggcttagctcaatgagatcggctccctccaaacac 1269260  T
Q  637 cctaaacaccttaacaactccaaaaa 662  Q
    | ||||||| |||||||| |||||||    
T  1269259 cataaacactttaacaaccccaaaaa 1269234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 32 - 373
Target Start/End: Complemental strand, 34230590 - 34230251
Alignment:
Q  32 atacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccaccta 131  Q
    ||||||| |||| ||| ||||||||||||||||| | ||||||||||| | |||||||  |||| |  |||||| ||||||||| ||||||||||| |||    
T  34230590 atacaaacaaaagacgccgtatataggcggaacaccaaaaaataaacatcgtaaaaacaccccttagaacaacatccaccaaaatacacgtcaccatcta 34230491  T
Q  132 aaacagacctcttc-atgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatca 230  Q
    || ||||| ||||| | |||| |||||||| |||||| ||||||||| |  |||| |||  ||||||||  | ||||||||||||||||| | ||||  |    
T  34230490 aa-cagac-tcttccacgaaaacgaccactataaaaacgatatccaacaacacccgtcgcaactactcac-ctccaaagaaaaaacacccataaaaaaaa 34230394  T
Q  231 aactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaa 330  Q
    || |  || |||| |||| ||||||  |||| |||||  ||||||||||||| ||||||||||||| | ||||||||||||| ||||||| |||| ||||    
T  34230393 aaatt-cagtcct-aaacaccaaagttgagccacatctgaaaagctcttatttgaaagatcattcagcttccaccacctctcaacctccgatccaccgaa 34230296  T
Q  331 agaaaccataaaaagcccaaaaccaaact--atccaaagagctga 373  Q
    |||||||| ||||||||||||| ||||||  ||||||||| ||||    
T  34230295 agaaaccacaaaaagcccaaaatcaaacttgatccaaagaactga 34230251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 49 - 359
Target Start/End: Complemental strand, 7696333 - 7696029
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatg 148  Q
    ||||||||||||||||| ||||||||||||||| |||||||  ||| || ||||||||||||||||| |||| ||||||||||||| | ||  ||||| |    
T  7696333 cgtatataggcggaacacccaaaaataaacaccttaaaaacacccccgaggacaacacccaccaaaatacacatcaccacctaaaataaactccttcacg 7696234  T
Q  149 aaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaac 248  Q
    ||| |||||| |||||||| ||||| ||  || || |||||||||||||||  |||  |   |||||||||||| ||||| ||||||    ||||| |||    
T  7696233 aaaacgaccaatgtaaaaatgatattca--accactcatcgtcactactcactccctta--gaaaaacacccctaaaaataaaactcctggtcctg-aac 7696139  T
Q  249 tccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagccc 348  Q
     ||||||  |||| ||||||  ||| ||| ||| |||||||||||||| | ||||||||||| |||||| || |||| ||||||||||| | ||||||||    
T  7696138 accaaagttgagccacatcctcaaatctcctatccgaaagatcattcagcttccaccacctcccgaccttcgatccaccgaaagaaaccgt-aaaagccc 7696040  T
Q  349 aaaaccaaact 359  Q
    |||||| ||||    
T  7696039 aaaacctaact 7696029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 4975155 - 4974990
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccct-aaaaactaccctgaagacaacaccca 109  Q
    ||||||| ||||||||| || |||||||  |||  |||||||||||||| ||||| || |||||||||||||| ||||||  || ||| || ||||||||    
T  4975155 cagagactagtgaaactaagaatacaaactaaaggcgtcgtatataggctgaacacccgaaaataaacaccctgaaaaacatccttgaggataacaccca 4975056  T
Q  110 ccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatcc 175  Q
    |||||  ||||  ||||||||||||||||| |||||| |||| ||||||||||||||| |||||||    
T  4975055 ccaaattacacaccaccacctaaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcc 4974990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 4993063 - 4992898
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccct-aaaaactaccctgaagacaacaccca 109  Q
    ||||||| ||||||||| || |||||||  |||  |||||||||||||| ||||| || |||||||||||||| ||||||  || ||| || ||||||||    
T  4993063 cagagactagtgaaactaagaatacaaactaaaggcgtcgtatataggctgaacacccgaaaataaacaccctgaaaaacatccttgaggataacaccca 4992964  T
Q  110 ccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatcc 175  Q
    |||||  ||||  ||||||||||||||||| |||||| |||| ||||||||||||||| |||||||    
T  4992963 ccaaattacacaccaccacctaaaacagacttcttcacgaaaacgaccactgtaaaaacgatatcc 4992898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 372 - 577
Target Start/End: Original strand, 14106561 - 14106768
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    ||||| |||||||||||||| | || |||| ||| || ||||||||||| ||||||||| || |||  ||||||  |||| |||||||||||| | ||||    
T  14106561 gatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccctcgccctgggtacatgagaggaacaccaaatcaagtcaaa 14106660  T
Q  470 gaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtgg 569  Q
     |  |||||| || | ||||||||||| ||||||||||||| |||| || ||||||| |||||| ||||||| ||| | |||| |||||| |||||| ||    
T  14106661 caggattgcagctagtcaccgactccctgtctcgaagcaaaagtaaccggcccaccggaaaccaacacacaataagcaagacagacgacatgataagcgg 14106760  T
Q  570 tggtgcaa 577  Q
    ||||||||    
T  14106761 tggtgcaa 14106768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 411 - 652
Target Start/End: Complemental strand, 17105416 - 17105173
Alignment:
Q  411 accaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagca 508  Q
    |||||||||| ||||||||| ||||||||||||||| | |||| |||| ||| | | |||| ||  ||||| || ||| ||||||||   |||| |||||    
T  17105416 accaaatcagtagggcacccctcacccctggtacaccaaagaaacacctaattaagtcaaacaaggttgcagctagacgccgactccttatctccaagca 17105317  T
Q  509 aacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttag 608  Q
    || |||| || ||||||| |||||||||||||| | ||| ||  || |||| |||| | | |||||||| || |||||||||||| ||||||||| | |     
T  17105316 aaagtaaccgacccaccggaaaccagcacacaatatgtaagatgaaagacatgatatgagatggtgcaaacaccaaacaaatcaaaaggaaaaggctcat 17105217  T
Q  609 ctcaacgggacccgctacctccaaacaccctaaacaccttaaca 652  Q
    | |||||||||  ||  |||| ||||||||||||||||||||||    
T  17105216 cacaacgggacaagcaccctctaaacaccctaaacaccttaaca 17105173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 7874335 - 7874165
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaacaccaaatcacgccaaag 470  Q
    |||||||||||||||||||| |||| |||| ||| ||  |||||||||| ||||||||| || |||  ||||||||||||||||||| |||| | |||      
T  7874335 gatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcacccatcgccctcggtacactagagaacaccatatcaagtcaagc 7874236  T
Q  471 aaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
    |  |||||| || |||||| ||||||| ||||||||||||   || || ||||||| | ||||||||||||    
T  7874235 aggattgcagctagacaccaactcccgatctcgaagcaaaaaaaaccggcccaccggacaccagcacacaa 7874165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 12343147 - 12343041
Alignment:
Q  91 accctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgt 190  Q
    ||||||| ||||||| ||| ||||| |||||||||||||||||||||||  ||||| |||| ||||| ||||||||| ||||||||  || || ||||||    
T  12343147 accctgaggacaacatccatcaaaatacacgtcaccacctaaaacagactccttcacgaaaacgacctctgtaaaaacgatatcca--accactcatcgt 12343050  T
Q  191 cactactca 199  Q
    |||||||||    
T  12343049 cactactca 12343041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 284 - 511
Target Start/End: Complemental strand, 13337415 - 13337177
Alignment:
Q  284 gaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagct-------gat 374  Q
    |||||||||||||   | ||||||||||||||||||  |||| ||||||||||||||||||| |||||||| ||||  |  |||||| ||       |||    
T  13337415 gaaagatcattcagtgttcaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaaacctaacttgagtcaaagaactgacttccgat 13337316  T
Q  375 ctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccctcac-ccctggtacactagag-aacaccaaatcacgccaaagaa 472  Q
     |||||||||||||||| | || | || ||| || |  |||||||||||||||||| | | ||||||||||| |||| ||||||||||||||||| | ||    
T  13337315 ttcgaatcaaaagtgatcggcccatcagactttaaggtcaaatcagaagggcaccccctcaccctggtacaccagagaaacaccaaatcacgccagataa 13337216  T
Q  473 aattgcaactggacaccgactcccggtctcgaagcaaac 511  Q
     |||||  || ||||||||||| |  |||||||||||||    
T  13337215 gattgctgctagacaccgactctcaatctcgaagcaaac 13337177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 13337660 - 13337561
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||||| ||||||| ||| ||||||| ||||  ||||||||||||| |||||| |  ||||||||||||||||||||  |||||| ||||||||||||    
T  13337660 cagagaccggtgaaacagagaatacaaacaaaaggcgtcgtatataggtggaacacctgaaaataaacaccctaaaaacacccctgaggacaacacccac 13337561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 99 - 359
Target Start/End: Original strand, 16952143 - 16952398
Alignment:
Q  99 gacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgacc-actgtaaaaaagatatccaatactacccatcgtcactact 197  Q
    |||||||||||| ||| || || ||||||| ||||||||||  ||||| |||| | | | |||| ||||||||||| ||  || || |||||||||||||    
T  16952143 gacaacacccacaaaataa-acatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactact 16952241  T
Q  198 caagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaa 297  Q
    ||  ||||||||||    |||||||| |||| |||||| || |||| || | ||||||  || | |||||| |||||||| ||| ||||||||| || |     
T  16952242 cac-ccccaaagaa----cacccctctaaatgaaactcccagtcctcaa-caccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttag 16952335  T
Q  298 catccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaact 359  Q
    | ||||||||||||| ||||||| |||| |||||||| |||| |||| | |||||||||||||    
T  16952336 cttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaact 16952398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 99 - 359
Target Start/End: Original strand, 17022808 - 17023063
Alignment:
Q  99 gacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgacc-actgtaaaaaagatatccaatactacccatcgtcactact 197  Q
    |||||||||||| ||| || || ||||||| ||||||||||  ||||| |||| | | | |||| ||||||||||| ||  || || |||||||||||||    
T  17022808 gacaacacccacaaaataa-acatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactact 17022906  T
Q  198 caagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaa 297  Q
    ||  ||||||||||    |||||||| |||| |||||| || |||| || | ||||||  || | |||||| |||||||| ||| ||||||||| || |     
T  17022907 cac-ccccaaagaa----cacccctctaaatgaaactcccagtcctcaa-caccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttag 17023000  T
Q  298 catccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaact 359  Q
    | ||||||||||||| ||||||| |||| |||||||| |||| |||| | |||||||||||||    
T  17023001 cttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaact 17023063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 99 - 359
Target Start/End: Original strand, 17060114 - 17060369
Alignment:
Q  99 gacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgacc-actgtaaaaaagatatccaatactacccatcgtcactact 197  Q
    |||||||||||| ||| || || ||||||| ||||||||||  ||||| |||| | | | |||| ||||||||||| ||  || || |||||||||||||    
T  17060114 gacaacacccacaaaataa-acatcaccacttaaaacagacgccttcacgaaaacaaactactgcaaaaaagatattcatcaccactcatcgtcactact 17060212  T
Q  198 caagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaa 297  Q
    ||  ||||||||||    |||||||| |||| |||||| || |||| || | ||||||  || | |||||| |||||||| ||| ||||||||| || |     
T  17060213 cac-ccccaaagaa----cacccctctaaatgaaactcccagtcctcaa-caccaaagttgatccacatccgaaaagctcctatccgaaagatcgtttag 17060306  T
Q  298 catccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaact 359  Q
    | ||||||||||||| ||||||| |||| |||||||| |||| |||| | |||||||||||||    
T  17060307 cttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaact 17060369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 12 - 175
Target Start/End: Original strand, 41113412 - 41113573
Alignment:
Q  12 agagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccacc 111  Q
    ||||||| ||||||||||| |||||||  ||| || | ||||||||||||||||||| |||||||| ||||||||||  ||||  | ||   ||||||||    
T  41113412 agagaccggtgaaactgagaatacaaactaaagacattgtatataggcggaacatccgaaaataaataccctaaaaaacaccc--atgagggcacccacc 41113509  T
Q  112 aaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatcc 175  Q
    |||| | |||| || |||||||||||||  ||||| |||| |||| | |||| ||| |||||||    
T  41113510 aaaataaacgttactacctaaaacagactccttcacgaaaacgactattgtacaaacgatatcc 41113573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 126
Target Start/End: Original strand, 29139624 - 29139736
Alignment:
Q  14 agaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaa 113  Q
    ||||| ||||||||||| ||||||| ||||  ||||||||||  | ||||||  | |||||||| ||| |||||||  | ||||| |||||| |||||||    
T  29139624 agaccggtgaaactgaggatacaaataaaaggcgtcgtatattagtggaacactcgaaaataaataccttaaaaacacctctgaaaacaacatccaccaa 29139723  T
Q  114 aaaacacgtcacc 126  Q
    || ||||||||||    
T  29139724 aatacacgtcacc 29139736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 541
Target Start/End: Original strand, 39338902 - 39339074
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    |||||||||||||||| ||| | || |||| ||||||  ||||||| || |||||| ||||| |||| ||||||| | || || ||||||||| | ||||    
T  39338902 gatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccctcgcccccggtacaccaaagaaaaaccaaatcaagtcaaa 39339001  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||| |||||| || ||| |||||||||| ||||||||| ||   ||  | ||||||||||||||||||||||    
T  39339002 caaatattgcagctagaccccgactcccgatctcgaagccaaatgaactggcccaccgaaaaccagcacacaa 39339074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 29997317 - 29997228
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacaga 138  Q
    |||||||| ||||||||||| |||||||||| ||||||| |  |||||| ||| || || || |||| | ||||||||| ||||||||||    
T  29997317 cgtatataagcggaacatccgaaaataaacatcctaaaatcatccctgaggaccactcctactaaaatatacgtcaccatctaaaacaga 29997228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 10524141 - 10523969
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcacc-ctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    |||||||||||||||||||| | || |||| ||||||  |||||||  | |||||||| ||| ||||  ||| || |||| || ||||||||| | ||||    
T  10524141 gatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattggcagggcacctctcgcccccagtagaccagagaaaaaccaaatcaagtcaaa 10524042  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||| ||||||||| ||  |||||||||| ||||||||| ||   || ||  |||||||||||||||||||||    
T  10524041 caaagattgcaactagagcccgactcccgatctcgaagccaaatgaaccggtccaccgaaaaccagcacacaa 10523969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 4472318 - 4472276
Alignment:
Q  46 cgtcgtatataggcggaacatccaaaaataaacaccctaaaaa 88  Q
    |||||||||||| |||||||||| |||||||||||| ||||||    
T  4472318 cgtcgtatatagacggaacatccgaaaataaacaccataaaaa 4472276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 16952049 - 16952083
Alignment:
Q  45 acgtcgtatataggcggaacatccaaaaataaaca 79  Q
    ||||||||||||||| |||||||||||||||||||    
T  16952049 acgtcgtatataggcagaacatccaaaaataaaca 16952083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 17022714 - 17022748
Alignment:
Q  45 acgtcgtatataggcggaacatccaaaaataaaca 79  Q
    ||||||||||||||| |||||||||||||||||||    
T  17022714 acgtcgtatataggcagaacatccaaaaataaaca 17022748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 136
Target Start/End: Original strand, 13699056 - 13699100
Alignment:
Q  92 ccctgaagacaacacccaccaaaaaacacgtcaccacctaaaaca 136  Q
    ||||||||| |||||||||||||| | || |||||||||||||||    
T  13699056 ccctgaagataacacccaccaaaataaacatcaccacctaaaaca 13699100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 219; Significance: 1e-120; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 670
Target Start/End: Original strand, 20701468 - 20702140
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||| | ||||||||||| ||||||| ||||  ||  |||||||||||||||| |   |||||||||| |||||| |  ||  || |||||||||||     
T  20701468 cagagatcggtgaaactgagaatacaaacaaaaggcgctgtatataggcggaacacctggaaataaacacactaaaa-cacccacgaggacaacacccat 20701566  T
Q  111 caaa-----aaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagcccc 205  Q
    ||||     |||||| |||||||||| ||||||||  |||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||  ||||    
T  20701567 caaaccctaaaacacttcaccacctataacagacccattcacgaaagcaaccactgtaaaaacgatatccaatactacccatcgtcactactcac-cccc 20701665  T
Q  206 aaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccacc 305  Q
    ||| ||||||||||| | |||| |||||||  | || |||| |  |||||  |||| |||| | |||||||| ||| |||||||||||||| | |||||     
T  20701666 aaaaaaaaaacaccctttaaaaacaaactcctagtcttgaa-caacaaagttgagccacattcgaaaagctcctatccgaaagatcattcagcttccact 20701764  T
Q  306 acctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagct-------gatctcgaatcaaaagtgattgacc 396  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||||  | ||||||| ||       |||||||||||||||||||| | |     
T  20701765 acctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttaagccaaagaactaactcccgatctcgaatcaaaagtgatcggca 20701864  T
Q  397 gaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaaca-ccaaatcacgccaaagaaaattgcaactggacaccgactc 494  Q
     ||||  ||| ||||||||||||||||||||||| ||||||| ||||||| |||||| | ||||||||||||||| ||| ||||| || |||||||| ||    
T  20701865 caccagtctaaatgaccaaatcagaagggcacccctcacccccggtacaccagagaaaaaccaaatcacgccaaacaaatttgcagctagacaccgaatc 20701964  T
Q  495 ccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaat 594  Q
    ||| |||| ||||||| |||| || |||| || |||||| ||||||| ||||||||||||| |||||||| | ||| |||||| ||||||||| |||||     
T  20701965 ccgatctcaaagcaaaagtaaccggcccatcggaaaccatcacacaaaaagtaggacaaacaacaagatacgcggtagtgcaaacaacaaacagatcaaa 20702064  T
Q  595 aggaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaactccaaaaaatgcatac 670  Q
     |||||| ||   ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||    
T  20702065 cggaaaaagtaccgctcaacgggacccgcttcctccaaacaccctaaacaccttaacaatcccaaaaaatgcatac 20702140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 117 - 661
Target Start/End: Original strand, 3880372 - 3880912
Alignment:
Q  117 acacgtcaccacctaaaacagacctcttcatgaaag-cgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaa 215  Q
    |||||||||||||||||||| || | ||   ||||  |||||||| |||||| ||||||||| || | |  |||||||||||||  |||| |||||||||    
T  3880372 acacgtcaccacctaaaacaaacttttttccgaaaaacgaccactataaaaacgatatccaacaccatctgtcgtcactactcac-cccctaagaaaaaa 3880470  T
Q  216 cacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgac 315  Q
    ||||||||||||| ||||||  | || |||| | ||||||| |||| ||||||||||||||| ||| |||||||| ||||||| ||||||||| ||||||    
T  3880471 cacccctcaaaattaaactccaagtcttgaa-caccaaagctgagccacatccaaaaagctcatatccgaaagattattcaacttccaccaccactcgac 3880569  T
Q  316 ctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagctgatctcgaatcaaaagtgattgaccgaccatactatatgacc 413  Q
    ||||| ||||  ||||||||||||||||| | ||||||||||||  |||||||        ||||||||||||||||| | || |||| ||| || ||||    
T  3880570 ctccgatccacggaaagaaaccataaaaatctcaaaaccaaacttgatccaaa--------ctcgaatcaaaagtgatcggcccaccaaactttaggacc 3880661  T
Q  414 aaatcagaagggcacc-ctcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaac 511  Q
    |||||||||||||||| |||||||  |||| || |||||| |||||||||| |||||| || || ||| || |||||||||||||| |||| |||||||     
T  3880662 aaatcagaagggcacctctcaccctcggtaaaccagagaaacaccaaatcatgccaaacaagatagcagctagacaccgactcccgatctcaaagcaaaa 3880761  T
Q  512 gtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctc 611  Q
    ||||  | ||||||| ||||||||| |||| ||||  |||||| |||| |||| |||||||||||| ||||||| | ||||| ||||||| | | | |||    
T  3880762 gtaactggcccaccggaaaccagcaaacaaaaagtctgacaaaggacatgatatgtggtggtgcaaacaacaaatatatcaaaaggaaaaagctcaactc 3880861  T
Q  612 aacgggacccgctacctcc-aaacaccctaaacaccttaacaactccaaaa 661  Q
    ||| ||||||||| | ||| |||||||||||||| ||||||| | ||||||    
T  3880862 aacaggacccgcttcttccaaaacaccctaaacatcttaacagccccaaaa 3880912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 11 - 139
Target Start/End: Original strand, 15120273 - 15120402
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccct-aaaaactaccctgaagacaacaccca 109  Q
    |||||||| || |||||||| |||||||  ||| ||| ||||| ||||| |||||||  | |||||||||||| ||||||  || ||| ||||||| |||    
T  15120273 cagagaccggtaaaactgagaatacaaactaaagacgacgtatgtaggcagaacatctgacaataaacaccctaaaaaacatccatgaggacaacatcca 15120372  T
Q  110 ccaaaaaacacgtcaccacctaaaacagac 139  Q
    |||||| |||| ||||||||||||||||||    
T  15120373 ccaaaatacacatcaccacctaaaacagac 15120402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 447 - 599
Target Start/End: Original strand, 15132636 - 15132788
Alignment:
Q  447 agagaacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagt 546  Q
    ||||||||||| |||| | |||| |  |||||| || | |||||||||||| |||||||||||| |||| || |||||||||||||| ||||||| ||      
T  15132636 agagaacaccatatcaagtcaaacaggattgcagctagtcaccgactcccgatctcgaagcaaaagtaaccggcccaccgaaaaccatcacacaataatc 15132735  T
Q  547 aggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaa 599  Q
    | || ||||  || |||||| |||||||||| | ||||||| ||||| |||||    
T  15132736 aagataaactgcatgataagcggtggtgcaaacgacaaacacatcaaaaggaa 15132788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 300 - 359
Target Start/End: Original strand, 15120553 - 15120612
Alignment:
Q  300 tccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact 359  Q
    ||||||||||||||||||||| |||| | ||||||||||||||||||||||||| |||||    
T  15120553 tccaccacctctcgacctccgatccaccaaaagaaaccataaaaagcccaaaactaaact 15120612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 13423606 - 13423532
Alignment:
Q  285 aaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact 359  Q
    |||||||| ||| | ||||||||||| || |||||| ||||||||||||||||||| |||||||| |||||||||    
T  13423606 aaagatcaatcagcttccaccacctcgcggcctccggtccatcgaaagaaaccatataaagcccataaccaaact 13423532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 136
Target Start/End: Complemental strand, 6860434 - 6860317
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatatagg--cggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaa 117  Q
    |||||||| || ||||||| |||| ||| ||||||||||  ||||||| |||||||||||||||||||||||  |  ||  |||||| ||||| |||| |    
T  6860434 gtgaaactaagaatacaaacaaaagacgccgtatataggggcggaacacccaaaaataaacaccctaaaaacacctatgcggacaac-cccacaaaaata 6860336  T
Q  118 cacgtcaccacctaaaaca 136  Q
    ||||||| |||||||||||    
T  6860335 cacgtcatcacctaaaaca 6860317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 561
Target Start/End: Complemental strand, 13423520 - 13423447
Alignment:
Q  487 accgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaag 561  Q
    |||||||| || ||||||| |||| || ||||  ||||||||||||||||||||| ||||| |||||||||||||    
T  13423520 accgactctcgatctcgaatcaaaagtgatcggtccaccgaaaaccagcacacaa-aagtaagacaaacgacaag 13423447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 3117537 - 3117364
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    ||||| |||||||||||||| | || |||||||||||| | ||||| || |||||| ||||| |||| || |||| |||| || ||||||||| | ||||    
T  3117537 gatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacccctcgcccccggaacaccagagaaaaaccaaatcaagtcaaa 3117438  T
Q  470 --gaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
       || ||||||||| ||| |||||||||  ||||||||| ||   || || ||||| |||||||| |||||||    
T  3117437 acaaagattgcaactagaccccgactcccaatctcgaagccaaatgaaccggcccactgaaaaccaacacacaa 3117364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 3880283 - 3880361
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaac 89  Q
    |||||||| ||||||||||  ||||||| ||||     |||||||| |||||||| | |||||||||||||||||||||    
T  3880283 cagagaccggtgaaactgaaaatacaaacaaaaggttccgtatataagcggaacaccaaaaaataaacaccctaaaaac 3880361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 16180675 - 16180727
Alignment:
Q  99 gacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaa 151  Q
    ||||||| ||||||||| | || ||||||||||||||||||| ||||| ||||    
T  16180675 gacaacatccaccaaaataaacatcaccacctaaaacagaccccttcaagaaa 16180727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 175; Significance: 7e-94; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 11 - 637
Target Start/End: Complemental strand, 8297880 - 8297245
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||||| ||||||||||| ||||||| ||||  ||| ||| |||||||||||| |  |||||| |||||||||||||  |||||| || |||| ||||    
T  8297880 cagagaccggtgaaactgagaatacaaa-aaaaggcgttgtacataggcggaacacctgaaaatacacaccctaaaaacacccctgaggataacatccac 8297782  T
Q  111 caaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactca---agccccaa 207  Q
    ||||| |||| ||||||||||||||| ||  ||||| ||||  ||||| |||||||| ||| |||||  | ||| ||||||||||||||   | ||||||    
T  8297781 caaaatacacatcaccacctaaaacacactccttcaagaaaaagaccaatgtaaaaacgatttccaa--ccacctatcgtcactactcactcacccccaa 8297684  T
Q  208 agaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccac 307  Q
    ||||||| ||||||||||||| |||||| | ||| |||| | ||||| | |||| |||||| |||||||| ||| ||||||| |||||||| ||||||||    
T  8297683 agaaaaa-cacccctcaaaattaaactccccatcatgaa-caccaaaaccgagccacatccgaaaagctcctatccgaaagaccattcaacttccaccac 8297586  T
Q  308 ctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagct-------gatctcgaatcaaaagtgattgaccga 398  Q
    ||| ||||||||| | || ||||||||||||||||||| |||||||||||||  | ||||||| ||       ||||||||||||||| | |||  || |    
T  8297585 ctcacgacctccgattcaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaaattattagccca 8297486  T
Q  399 ccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactccc 496  Q
    |||| || ||  ||||||||||||||||| |||||||||  |||||||||||| |||||||||||| || ||| ||||||||| || |||||| |||| |    
T  8297485 ccatgctttagaaccaaatcagaagggcacccctcaccctcggtacactagagaaacaccaaatcaagcaaaacaaaattgcagctagacaccaactctc 8297386  T
Q  497 ggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaatag 596  Q
    | |||||||||||| ||||||| ||||| |||||||||| || || ||||| |||||| || |||||  | | |||||||| ||||||||||||||| ||    
T  8297385 gatctcgaagcaaaagtaatcggcccactgaaaaccagcgcagaaaaagtatgacaaatgagaagatgcgcgatggtgcaaacaacaaacaaatcaaaag 8297286  T
Q  597 gaaaaggtttagctcaacgggacccgctacctccaaacacc 637  Q
     |||| | | |||| ||||||||||| | |||| |||||||    
T  8297285 aaaaatgctcagctaaacgggacccgattcctctaaacacc 8297245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 11 - 647
Target Start/End: Original strand, 26045634 - 26046278
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaa-ctaccctgaagacaacaccca 109  Q
    |||||||| |||||  |||||||||||| ||||  || ||||||||| |||||||||||||||||||||||||||||| |  |||||| |||||||||||    
T  26045634 cagagaccggtgaagttgagcatacaaacaaaaggcgccgtatatagacggaacatccaaaaataaacaccctaaaaaacgcccctgaggacaacaccca 26045733  T
Q  110 ccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaag 209  Q
    ||||||  |||||||||||||||||||||| |||||||||||  |||||| ||||||| || |||||| ||  |||||||||||||||||  ||||||||    
T  26045734 ccaaaattcacgtcaccacctaaaacagacttcttcatgaaaatgaccacggtaaaaacgaaatccaacacctcccatcgtcactactca--ccccaaag 26045831  T
Q  210 aaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacct 309  Q
     |||||||||||||||||| |||||| ||||||| |||| ||||||  |||  || ||| |||||||| |||  ||||||||| ||| | |||||  |||    
T  26045832 -aaaaacacccctcaaaattaaactctcaatcct-aaacaccaaagttgagtcacctccgaaaagctcatatctgaaagatcaatcagcttccacagcct 26045929  T
Q  310 ctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagct-------gatctcgaatcaaaagtgattgaccgacc 400  Q
      ||||||||| |||  ||| ||||||||||||||| |||||||||||||  | |||||   ||       |||||||||||||||||||| |    |||    
T  26045930 aacgacctccgatcccccgagagaaaccataaaaagtccaaaaccaaacttgagccaaaacactaactcccgatctcgaatcaaaagtgatcggttcacc 26046029  T
Q  401 atactatatgaccaaa-tcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccg 497  Q
    | ||| || ||||||| ||| || |||| |||| | ||| ||||||| |||| ||||||||||||||||||| || |||||| || | ||||||||||||    
T  26046030 agactttaggaccaaactcaaaaaggcaccccttaaccc-ggtacaccagagaaacaccaaatcacgccaaataagattgcagctagccaccgactcccg 26046128  T
Q  498 gtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaatagg 597  Q
    |||||||||||||  |||||  ||||||  |||| ||||||||| ||||| ||||||||||| |||| | |||||||||| ||||||||| ||||| ||     
T  26046129 gtctcgaagcaaaattaatctgcccaccagaaactagcacacaaaaagtatgacaaacgacatgatatgcggtggtgcaaacaacaaacatatcaaaaga 26046228  T
Q  598 aaaaggtttagctcaacgggacccgctacctccaaacaccctaaacacct 647  Q
    | |||| | ||  ||||  |||||||| |||| |||||||||||||||||    
T  26046229 agaaggctcagtgcaacatgacccgcttcctctaaacaccctaaacacct 26046278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 49 - 663
Target Start/End: Original strand, 14302153 - 14302760
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatg 148  Q
    |||||||||  |||||| ||||||||||| | |||||||||  |||||| ||||||||||||||||| ||||||||||||||||||||||   ||||  |    
T  14302153 cgtatatagaaggaacacccaaaaataaaaatcctaaaaacacccctgatgacaacacccaccaaaatacacgtcaccacctaaaacagattccttcgcg 14302252  T
Q  149 aaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaac 248  Q
    ||| |||||| |||||||| ||||||||| || |||  |||||||||||| | |||||||| ||||| |||||||||||| |||||| || ||||| |||    
T  14302253 aaaacgaccaatgtaaaaacgatatccaacaccacctgtcgtcactactc-atccccaaag-aaaaatacccctcaaaattaaactcccactcctg-aac 14302349  T
Q  249 tccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagccc 348  Q
     ||||||| ||||               | ||| ||||||||||| || | ||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  14302350 accaaagctgagc---------------catatccgaaagatcatgcagcttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagccc 14302434  T
Q  349 aaaaccaaact--atccaaagagctg-------atctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccct 438  Q
    |||||||||||   |||||||| |||       |||||||| ||||||||||    | |||| ||| || ||||||| |||||||||| |||||||||      
T  14302435 aaaaccaaacttgctccaaagaactgactcccaatctcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggcatccctcaccctc 14302534  T
Q  439 ggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcac 537  Q
    | ||||| |||| ||||||| |||||||||||  |  ||||| || ||||| |||||||| |||||||||||| ||||  |  || ||  ||||||||||    
T  14302535 gatacaccagagaaacaccagatcacgccaaactagcttgcagctagacacggactcccgatctcgaagcaaaagtaacggggcccccagaaaccagcac 14302634  T
Q  538 acaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaacacc 637  Q
    |||| ||| | |||||||||||  ||| |  ||||||||| ||||||| | ||||| | ||||| | | | |||||||||||||||| |||||||||| |    
T  14302635 acaaaaagaatgacaaacgacataatatgatgtggtgcaaacaacaaatagatcaaaacgaaaatgctcaactcaacgggacccgcttcctccaaacatc 14302734  T
Q  638 ctaaacaccttaacaactccaaaaaa 663  Q
     ||||||||| |||||| ||||||||    
T  14302735 ttaaacacctaaacaaccccaaaaaa 14302760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 20 - 658
Target Start/End: Original strand, 13953928 - 13954557
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccct-gaagacaacacccaccaaaaaac 118  Q
    |||||||||||  ||||||  |||  || ||||||||||||||||| |  |||||||||||| |||||| |||||| || |||||| |||||||||| ||    
T  13953928 gtgaaactgagagtacaaactaaaggcgccgtatataggcggaacacctgaaaataaacaccttaaaaaatacccttgaggacaactcccaccaaaatac 13954027  T
Q  119 acgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacac 218  Q
    | |||| | |||||||||||| | ||||||||  |||| ||||||||||  |||||| | |  |||||||||||| ||||   |||||| ||||   |||    
T  13954028 atgtcatctcctaaaacagactttttcatgaagacgactactgtaaaaacaatatcccacatcacccatcgtcacaactctc-ccccaacgaaa---cac 13954123  T
Q  219 ccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctc 318  Q
    ||||| |||| |||||| || |||| || | ||||||| |||| |||||| |||||              |||| |||   |||||||||| || || ||    
T  13954124 ccctctaaattaaactcccagtcctcaa-cgccaaagctgagccacatccgaaaag--------------atcaatcagtttccaccacctttcaacttc 13954208  T
Q  319 cgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatat 409  Q
    || |||| |||||||||||||||||||||||||||||||||  | ||||||   |||       |||||||||||||||||| | || |||| ||| ||     
T  13954209 cgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgagccaaagtaatgactcccgatctcgaatcaaaagtgatcggcccaccagactttag 13954308  T
Q  410 gaccaaatcagaagggcaccctcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagca 508  Q
    |||||||||||||||   ||||||||   ||||||| |||||| ||| |||||| | |||| || |||||| || |||||||||||  | ||||||||||    
T  13954309 gaccaaatcagaaggcacccctcaccttcggtacaccagagaaacacaaaatcaagtcaaataagattgcagctagacaccgactcttgatctcgaagca 13954408  T
Q  509 aacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttag 608  Q
    || |||| || ||||||||||||||||| |||| || || ||||||||||| |||||| || ||||||| ||||||||  | ||| ||| |||||  |||    
T  13954409 aaagtaaccggcccaccgaaaaccagcatacaaaaattatgacaaacgacatgataagcggcggtgcaaacaacaaaccgaccaaaaggtaaaggcatag 13954508  T
Q  609 ctcaacgggacccgctacctccaaacaccctaaacaccttaacaactcca 658  Q
     || ||||| ||  || |||||||||||||||||||||||||||||||||    
T  13954509 ttccacggg-ccaactccctccaaacaccctaaacaccttaacaactcca 13954557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 11 - 356
Target Start/End: Complemental strand, 25992411 - 25992076
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||||| |||||| |||  ||||||| ||||  || |||||||| |||||||| || | |||||||||||||||||| ||||  | ||||||||||||    
T  25992411 cagagaccggtgaaaatgataatacaaacaaaaggcgccgtatatatgcggaacacccgacaataaacaccctaaaaac-accccaatgacaacacccac 25992313  T
Q  111 caaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaag-ccccaaag 209  Q
    |||||         |||||||||||||||| ||||| |||||| ||||||||||||| |||||||||||| |||||||| ||||||||  | ||||||||    
T  25992312 caaaat--------ccacctaaaacagaccccttcacgaaagcaaccactgtaaaaacgatatccaataccacccatcgccactactctcgcccccaaag 25992221  T
Q  210 aaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacct 309  Q
    |||||| ||||||||||| |||||||  | ||||| ||| |||||||||||| || | |||||||||  |   |||||||||||| | | |||| || ||    
T  25992220 aaaaaatacccctcaaaa-caaactcctagtcctg-aacaccaaagcagagccacctacaaaaagcttctccccgaaagatcattaagcttccaacatct 25992123  T
Q  310 ctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaa 356  Q
    | ||||||||| |||||||||||||| ||||||||||||||||||||    
T  25992122 cacgacctccgatccatcgaaagaaatcataaaaagcccaaaaccaa 25992076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 211 - 650
Target Start/End: Original strand, 7195109 - 7195557
Alignment:
Q  211 aaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctc 310  Q
    ||||||| |||||||||| |||||| || |||||||   ||||||| |||| ||||||  ||||||| ||| | |||||| ||||| | ||||| |||||    
T  7195109 aaaaacaaccctcaaaataaaactc-cagtcctgaata-ccaaagctgagccacatccgcaaagctcctatccaaaagattattcagcttccacgacctc 7195206  T
Q  311 tcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgacca 401  Q
    |||||||||| |||| ||||| ||||||||||| |||||||  | ||||  | ||||||| ||||       |||||||||||||||||| | |  ||||    
T  7195207 tcgacctccgatccaccgaaaaaaaccataaaa-gcccaaactctaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggctcacca 7195305  T
Q  402 tactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggt 499  Q
     ||| |||| ||||||||||||||||||| |||||| |||||||| |||||| ||| ||||||||||||| || |||||| || | |||||||||||| |    
T  7195306 gactttatggccaaatcagaagggcacccctcaccc-tggtacaccagagaaacactaaatcacgccaaacaatattgcagctagccaccgactcccgat 7195404  T
Q  500 ctcgaagcaaacgtaatcgccccac-cgaaaaccagcacacaacaagtaggac-aaacgacaagataagtggtggtgcaagcaacaaacaaatcaatagg 597  Q
    ||||||||||| ||||  | |||||  |||||||| ||||||| ||||| ||| ||| || | ||| || |||||||||| ||||||||| || || |||    
T  7195405 ctcgaagcaaaagtaactggcccactggaaaaccaacacacaaaaagtatgacaaaatgatatgatgagcggtggtgcaaacaacaaacatataaaaagg 7195504  T
Q  598 aaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaa 650  Q
    ||||||   ||| |||  |||| |||| |||||||||||||||||||||||||    
T  7195505 aaaaggcccagcacaaaaggacacgcttcctccaaacaccctaaacaccttaa 7195557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 125 - 497
Target Start/End: Original strand, 33258665 - 33259046
Alignment:
Q  125 ccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctca 224  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| | |||||| |||||||| | ||| |||||||||||||||| ||    
T  33258665 ccacctaaaacagatctcttcacgaaagcgaccactgtaaaaacgatatccaataccatccatcgccactactc-acccctaaagaaaaaacaccccaca 33258763  T
Q  225 aaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttcc 324  Q
    ||| |||||||  |  |||| ||| ||||||| |||| |||||||| |||||| |    || | |||||||| | ||||| | ||||||||||||| |||    
T  33258764 aaaacaaactcctagacctg-aacaccaaagctgagccacatccaacaagctcctccctgagaaatcattcagcttccactatctctcgacctccgatcc 33258862  T
Q  325 atcgaaagaaaccataaaaagcccaaaaccaaact--atccaaaga-------gctgatctcgaatcaaaagtgattgaccgaccatactatatgaccaa 415  Q
    | ||||||||||||||||||||||||| |||| ||  | |||||||        |||||||||||||||||||||| | || |||| ||| ||  |||||    
T  33258863 accgaaagaaaccataaaaagcccaaatccaacctcgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccaccagactttagcaccaa 33258962  T
Q  416 atcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccg 497  Q
    | ||||||| || ||||||||   ||||||| |||| ||||||||||| ||||||| || |||| | || || |||||||||||    
T  33258963 aacagaaggacacccctcaccttcggtacaccagagaaacaccaaatcgcgccaaacaagattgtagctagataccgactcccg 33259046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 14 - 320
Target Start/End: Original strand, 26405222 - 26405521
Alignment:
Q  14 agaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaa 113  Q
    ||||| ||||||||||| ||||||| ||||  |||||||||||| ||||||| || |||||||||||| |||||||  |||||| ||||||| |||||||    
T  26405222 agaccggtgaaactgagaatacaaacaaaaggcgtcgtatatagtcggaacacccgaaaataaacaccttaaaaacacccctgaggacaacaaccaccaa 26405321  T
Q  114 aaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaa 213  Q
    || ||||||||||||||||||||||| |||||||| ||  || |||||| ||||  |||||||||   ||||||||||||||||||  || ||||| |||    
T  26405322 aatacacgtcaccacctaaaacagacttcttcatggaaatga-cactgttaaaaccatatccaat--cacccatcgtcactactca--cctcaaag-aaa 26405415  T
Q  214 aacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcg 313  Q
    ||||| | ||||||| ||||||    ||||| ||| ||||||  |||| || ||| |||||||| ||| ||||||| || ||| | ||||||||||||||    
T  26405416 aacactcatcaaaattaaactcctcgtcctg-aacaccaaagtcgagccacctccgaaaagctcatatccgaaagaccaatcagcttccaccacctctcg 26405514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 252 - 515
Target Start/End: Original strand, 7391944 - 7392213
Alignment:
Q  252 aaagcagagcaacatccaaaaagctcttattcga-aagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaa 350  Q
    |||||||||| |||||| |||||||| ||| | | ||||||| ||  | || |||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  7391944 aaagcagagccacatccgaaaagctcctatccaataagatcaatccgcttcaaccacctctcgacctccgatccaccgaaagaaaccataaaa-gcccaa 7392042  T
Q  351 aaccaaactatccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggta 442  Q
    ||||||     ||||||| ||||       |||||||||||||||||| |  | |||| ||| || ||||||||||||||||||||| ||||||  ||||    
T  7392043 aaccaatg---ccaaagaactgactcccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccctcaccctcggta 7392139  T
Q  443 cactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaa 515  Q
    ||  |||||| |||||||||| |||||| || |||||| || |||||| ||||||| |||||||||||| ||||    
T  7392140 catcagagaaacaccaaatcaagccaaacaagattgcagctagacaccaactcccgatctcgaagcaaaagtaa 7392213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 33109882 - 33110050
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaaca 119  Q
    ||||||||||| ||||||| |||| |||  |||||  | || |||| || |||||||||||  ||||||| ||||| | ||||||||||||||||| |||    
T  33109882 gtgaaactgagaatacaaacaaaagacgctgtata--gccgaaacacccgaaaataaacactttaaaaac-accct-atgacaacacccaccaaaataca 33109977  T
Q  120 cgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtca 192  Q
    ||||| ||||||||||| ||| ||||| |||| ||||||||||||||| |||||||||||| |||||||||||    
T  33109978 cgtcatcacctaaaacaaaccccttcacgaaaacgaccactgtaaaaacgatatccaataccacccatcgtca 33110050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 7195008 - 7195100
Alignment:
Q  47 gtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagac 139  Q
    ||||| |||| ||||||||||||||||||||||||||||||||  | |||  ||||||||||||||||| |||||||||||||||||||||||    
T  7195008 gtcgtttatatgcggaacatccaaaaataaacaccctaaaaacaccgctgcggacaacacccaccaaaatacacgtcaccacctaaaacagac 7195100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 30097722 - 30097614
Alignment:
Q  32 atacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccc-tgaagacaacacccaccaaaaaacacgtcaccacct 130  Q
    |||||||  ||| ||| ||||||||||||||||| || |||||||||||||||||||  | || ||| ||||||||||||||||| ||||||||||||||    
T  30097722 atacaaactaaagacgccgtatataggcggaacacccgaaaataaacaccctaaaaaacatccatgatgacaacacccaccaaaatacacgtcaccacct 30097623  T
Q  131 aaaacagac 139  Q
    |||||||||    
T  30097622 aaaacagac 30097614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 285 - 358
Target Start/End: Original strand, 21402778 - 21402851
Alignment:
Q  285 aaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaac 358  Q
    |||||||| ||||| ||||||||||||| ||||||  |||| |||||||||||||||||||| |||||||||||    
T  21402778 aaagatcaatcaacttccaccacctctcaacctccaatccaccgaaagaaaccataaaaagctcaaaaccaaac 21402851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 20 - 139
Target Start/End: Complemental strand, 7682954 - 7682835
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactac-cctgaagacaacacccaccaaaaaac 118  Q
    ||||||||||| |||||||  |||  ||||||||||||||||||||||| ||||||| ||||| ||||| |||   |||  |||||||||||||||| ||    
T  7682954 gtgaaactgagaatacaaattaaaggcgtcgtatataggcggaacatccgaaaataagcaccc-aaaaaatacttatgagaacaacacccaccaaaatac 7682856  T
Q  119 acgtcaccacctaaaacagac 139  Q
    || ||||||||||||| ||||    
T  7682855 acatcaccacctaaaatagac 7682835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 177
Target Start/End: Complemental strand, 10175089 - 10174924
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||||| |||||| | || ||||||| ||||  | ||||||||||||  |||| ||  ||||||||| |||||||||  | | || ||||||||||||    
T  10175089 cagagaccggtgaaattaagaatacaaacaaaaggcatcgtatataggcaaaaca-cctgaaataaacatcctaaaaacacctccgaggacaacacccac 10174991  T
Q  111 caaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaa 177  Q
    ||||  |||||| ||||||||||||||||  ||||   ||| ||||||| ||||||| |||||||||    
T  10174990 caaagtacacgtaaccacctaaaacagactccttctaaaaaacgaccacggtaaaaacgatatccaa 10174924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 37108170 - 37108105
Alignment:
Q  50 gtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaa 115  Q
    |||||||||||||||||| |||||||||||||||||||||  || ||| || ||||||||||||||    
T  37108170 gtatataggcggaacatcaaaaaataaacaccctaaaaacacccatgaggataacacccaccaaaa 37108105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 18593287 - 18593115
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    ||||||||||||||||||||   || || | ||||||  ||||||| || |||||| ||||| |||| ||||||| |||| || ||||||||| | ||||    
T  18593287 gatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggcatccctcgcccccggtacacgagagaaaaaccaaatcaagtcaaa 18593188  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||| ||||||||| ||| |||||||||| ||||||||| ||   || || ||||||||||| ||||||||||    
T  18593187 caaagattgcaactagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaatcagcacacaa 18593115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 136
Target Start/End: Complemental strand, 7403734 - 7403669
Alignment:
Q  70 aaaataaacaccctaaaaactaccc-tgaagacaacacccaccaaaaaacacgtcaccacctaaaaca 136  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||  |||||||||||| ||||||    
T  7403734 aaaataaacaccctaaaaa--acccatgaagacaacacccaccaaaattcacgtcaccaccgaaaaca 7403669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 698405 - 698233
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    |||||||||||||||| ||| |  | |||| ||||||  ||||||| || |||||| ||||| |||| ||||||| |||| || ||||||||| | ||||    
T  698405 gatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaatcaagtcaaa 698306  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||| ||||||||| ||| | |||||||| ||||||||| ||   || || |||||  |||||||||||||||    
T  698305 caaagattgcaactagaccctgactcccgatctcgaagccaaatgaaccggcccactaaaaaccagcacacaa 698233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 436
Target Start/End: Original strand, 39024487 - 39024551
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccctcaccc 436  Q
    |||||||||||||||| |||||| | |||| |||  | |||||| ||||||||||||||||||||    
T  39024487 gatctcgaatcaaaagcgattgagccaccaaacttcaggaccaactcagaagggcaccctcaccc 39024551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 539
Target Start/End: Complemental strand, 34378142 - 34377972
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcac-cctcacccctggtacactagagaaca-ccaaatcacgccaaa 469  Q
    |||||||||||||||||||| | || |||| ||| ||  ||||||| || ||||||| |||  |||| ||||||| |||||| | |||||||| | ||||    
T  34378142 gatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcactccttgcccccggtacaccagagaaaacccaaatcaagtcaaa 34378043  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacac 539  Q
     ||| |||||| || |||  ||||||||| ||||||||| ||   || || || |||||||||||||||||    
T  34378042 caaagattgcagctagacctcgactcccgatctcgaagccaaatgaaccggcctaccgaaaaccagcacac 34377972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 430
Target Start/End: Original strand, 39184224 - 39184282
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc 430  Q
    |||||||||||||||||||| | || |||| || | |||| ||||||||||||||||||    
T  39184224 gatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatcagaagggcaccc 39184282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 258 - 334
Target Start/End: Original strand, 17853981 - 17854056
Alignment:
Q  258 gagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa 334  Q
    |||| |||||| ||||| || ||||| |||||||||||||| ||||||||||||| || || | |||| ||||||||    
T  17853981 gagccacatccgaaaag-tcatattctaaagatcattcaacttccaccacctctcaacttcaggtccaccgaaagaa 17854056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 27713481 - 27713405
Alignment:
Q  13 gagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatcc-aaaaataaacaccctaaaaa 88  Q
    |||||||||||||||||| |||||||  |||  || | ||||||||||||||| || |||||||||| || ||||||    
T  27713481 gagaccagtgaaactgaggatacaaacgaaaggcgccatatataggcggaacacccgaaaaataaactccataaaaa 27713405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 287 - 354
Target Start/End: Original strand, 39024385 - 39024453
Alignment:
Q  287 agatcattcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaacc 354  Q
    |||||||||||  ||||||||||||| || |||  |||| |||||||| |||||||||| |||||||||    
T  39024385 agatcattcaagttccaccacctctcaacttccaatccaccgaaagaacaccataaaaaacccaaaacc 39024453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 4e-86; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 11 - 654
Target Start/End: Original strand, 42532930 - 42533574
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||||| ||| ||||||| ||||||  ||||  || ||||||||||||||||| |   |||||||||||||||||||| || ||| ||||||||||||    
T  42532930 cagagaccggtggaactgagaatacaaccaaaaggcgccgtatataggcggaacacctggaaataaacaccctaaaaactcccttgatgacaacacccac 42533029  T
Q  111 caaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaaga 210  Q
     |||||| |||||| ||||||||||| |||| |||| |||||| |||| |||||||| || ||||||||| |||||||||||||||||  ||||| ||      
T  42533030 aaaaaaatacgtcatcacctaaaacatacctattcacgaaagcaaccattgtaaaaatgaaatccaataccacccatcgtcactactc--gcccccaaag 42533127  T
Q  211 aaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctc 310  Q
    ||||||||| || ||||  ||||||      |||||||  |||||| || | | |||| ||||||||||||  |||||||| ||||    ||||||||||    
T  42533128 aaaaacacctctaaaaaataaactc------ctgaaac--caaagctgatccatatccgaaaagctcttatctgaaagatcgttcagttgccaccacctc 42533219  T
Q  311 tcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgacca 401  Q
     ||||||| | |||| ||||||||||||||||||||||||| |||||||  | ||||||   |||       ||||||||||||||||||   || ||||    
T  42533220 acgacctctgatccaccgaaagaaaccataaaaagcccaaa-ccaaacttaagccaaaggattgactcccgatctcgaatcaaaagtgatcagcccacca 42533318  T
Q  402 tactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggt 499  Q
     ||| || ||||||||||| ||||||||| ||||||| | | ||| |||||| ||||| ||| ||||||| || | |||| |||||||| |||||||| |    
T  42533319 gactttaggaccaaatcaggagggcacccctcacccccgatgcaccagagaaacaccacatcgcgccaaataagaatgcagctggacacagactcccgat 42533418  T
Q  500 ctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaa-caaacaaatcaatagga 598  Q
    ||||||||||| |||| || |||| || | |||||||||||| ||||| |||||||||||||| |   |||||||||| ||| |||||||||||| ||||    
T  42533419 ctcgaagcaaaagtaaccggcccatcggagaccagcacacaaaaagtatgacaaacgacaagagatacggtggtgcaaacaaccaaacaaatcaaaagga 42533518  T
Q  599 aaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaac 654  Q
    ||||| | ||  ||||||||| |||| ||||||| |||| ||||||||||||||||    
T  42533519 aaaggctcagaacaacgggacacgcttcctccaaccaccttaaacaccttaacaac 42533574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 153 - 654
Target Start/End: Complemental strand, 8745422 - 8744913
Alignment:
Q  153 cgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactcca 252  Q
    |||||| || |||||  |||||||| || | || |||||||||||||  ||||||||||||| ||||||||||||| |||||| || || |||| | |||    
T  8745422 cgaccaatgaaaaaacaatatccaacaccatccttcgtcactactcac-ccccaaagaaaaa-cacccctcaaaattaaactcccagtcttgaa-cacca 8745326  T
Q  253 aagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaa 352  Q
    |||| |||| |||||| |||||||| |||  |||||||||| || | ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||    
T  8745325 aagctgagccacatccgaaaagctcctatctgaaagatcatgcagcttccacaacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaa 8745226  T
Q  353 ccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggta 442  Q
    |||||||  |||||| || ||||       |||||||||||||||||| | || |||| | | || ||||||||||||||| ||||| ||||||  |||     
T  8745225 ccaaacttgatccaacgaactgaatcccgatctcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccctcaccctcggtg 8745126  T
Q  443 cactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
    ||| |||||| ||||| ||||| ||||| || |||||| || ||||||| || ||| |||||||||||| |||| || ||||||||||||||||||||||    
T  8745125 caccagagaaacaccagatcacaccaaacaacattgcagctagacaccgccttccgatctcgaagcaaaagtaaccggcccaccgaaaaccagcacacaa 8745026  T
Q  542 caagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaacaccctaa 641  Q
     ||| | ||||||||||| |||| | |||||||||| ||||||| | ||||| |||| |||| | | ||||||  ||| |||| |||||||||| | |||    
T  8745025 aaagcatgacaaacgacatgatatgcggtggtgcaaacaacaaatagatcaaaaggagaaggctcaactcaacaagactcgcttcctccaaacatcgtaa 8744926  T
Q  642 acaccttaacaac 654  Q
    |||||||||||||    
T  8744925 acaccttaacaac 8744913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 49 - 647
Target Start/End: Complemental strand, 1321166 - 1320562
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctctt-cat 147  Q
    ||||||||||||||||  || ||||||||||||||||||||  || |||||||| || ||||||||| |||| ||||||||||||||||||| ||| ||     
T  1321166 cgtatataggcggaactcccgaaaataaacaccctaaaaacc-ccttgaagacaccatccaccaaaatacacatcaccacctaaaacagacccctttcac 1321068  T
Q  148 gaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaa 247  Q
    |||||| ||||||||||||| |||||| ||||| || |||||||||||||||  ||||||||||||   |||||||||||  |||||| |  || |||||    
T  1321067 gaaagcaaccactgtaaaaacgatatctaataccactcatcgtcactactcaccccccaaagaaaa---acccctcaaaactaaactccctgtcatgaaa 1320971  T
Q  248 ctccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcc 347  Q
      ||||||  |||| |||||  ||||| |||||| |||  |||||| ||    ||||| |||||||||||||| |||| |||||||||||||||||||||    
T  1320970 --ccaaagttgagccacatctgaaaagatcttatccgagggatcatacagttgccaccccctctcgacctccgatccaccgaaagaaaccataaaaagcc 1320873  T
Q  348 caaaacc-aaact--atccaaagagct-------gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcaccc 436  Q
    ||||||| |||||  | ||||||| ||       ||| | |||||||||||||| | || |||| ||| ||||||||||||| ||||||| |||||||||    
T  1320872 caaaaccaaaacttgagccaaagaactgacttccgattttgaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccctcaccc 1320773  T
Q  437 ctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagc 535  Q
    | | ||||  |||| ||||||||||  ||||||| |||||| || || |||||| ||||||| ||||||||||||   |||||  |||||| |||||| |    
T  1320772 ccgatacatcagagaaacaccaaattgcgccaaacaaaattacagctagacaccaactcccgatctcgaagcaaa-aaaatcggtccaccggaaaccaac 1320674  T
Q  536 acacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaaca 635  Q
    ||| || ||||| | ||| ||||| |||| | |||||||||| ||||||||| ||  | ||| ||||  | ||||||||||||||| || || |||||||    
T  1320673 acagaaaaagtatggcaaccgacatgatatgcggtggtgcaaacaacaaacagattcaaagggaaagactcagctcaacgggacccacttccaccaaaca 1320574  T
Q  636 ccctaaacacct 647  Q
    || |||||||||    
T  1320573 ccataaacacct 1320562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 21 - 492
Target Start/End: Original strand, 24324479 - 24324957
Alignment:
Q  21 tgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacac 120  Q
    ||||| |||| ||||||| |||||||||| |||||||  | |||| || ||||||||||| ||||||||  || ||| |||||||| |||||||| ||||    
T  24324479 tgaaagtgagaatacaaacaaaaaacgtcatatatagctgaaacacccgaaaataaacactctaaaaacacccttgaggacaacactcaccaaaatacac 24324578  T
Q  121 gtcaccacctaaaacagacctcttcatg-aaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacc 219  Q
    |||||||| ||||||||||  ||||| | ||| |||||| ||||| || ||||||||  || | ||||||||||||||||  |||| ||  |||||||||    
T  24324579 gtcaccacttaaaacagactccttcacgaaaaacgaccattgtaagaacgatatcca--acca-ccatcgtcactactca--cccctaaagaaaaacacc 24324673  T
Q  220 cctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctcc 319  Q
    ||||||||| |||||| |  ||||| ||| ||||||| |||| ||| || |||||||| ||  |||||||||||||| | ||||||||| ||||||||||    
T  24324674 cctcaaaataaaactctccgtcctg-aacaccaaagctgagccacagccgaaaagctcctaaccgaaagatcattcagcttccaccacccctcgacctcc 24324772  T
Q  320 gttccatcgaaagaaaccataaaaagcccaaaacc-aaact--atccaaaga-------gctgatctcgaatcaaaagtgattgaccgaccatactatat 409  Q
    | |||| | |||||||||||||||||||||||||| |||||  | |||||||        | ||||||||||||||| |||| | || |||| ||| ||     
T  24324773 gatccacctaaagaaaccataaaaagcccaaaaccaaaacttgagccaaagaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaa 24324872  T
Q  410 gaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgac 492  Q
    |||||||||||||||||| |||| | ||| ||||||| | || ||||||||||||| ||||| || ||||||||| |||||||||    
T  24324873 gaccaaatcagaagggcacccctaaaccccggtacaccaaagaaacaccaaatcacaccaaacaagattgcaactagacaccgac 24324957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 372 - 653
Target Start/End: Complemental strand, 16954697 - 16954414
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaac-accaaatcacgccaaa 469  Q
    ||||||||| |||||||||| |  | |||| ||| || ||||||||||||||||||||| ||||| ||| ||||| ||||||  |||||||| ||||||     
T  16954697 gatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcagaagggcacccctcacctctgatacaccagagaaagaccaaatcgcgccaac 16954598  T
Q  470 gaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtgg 569  Q
     || |||||| || |||||| |||| || ||| |||||||| ||||||| |||| || |||||||||||||  ||||| |||||||||||||||| |  |    
T  16954597 caagattgcagctagacaccaactctcgatctggaagcaaaagtaatcggcccatcggaaaccagcacacagtaagtatgacaaacgacaagatatgcag 16954498  T
Q  570 tggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaa 653  Q
    |||||||| ||||||||| ||| | ||||||||| | | ||||||| ||||||||||||||||| |||||||||||||||||||    
T  16954497 tggtgcaaacaacaaacatatccaaaggaaaaggctcaactcaacgagacccgctacctccaaaaaccctaaacaccttaacaa 16954414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 142 - 663
Target Start/End: Original strand, 6716539 - 6717060
Alignment:
Q  142 cttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatc 241  Q
    ||||| |||| ||||||||||||||| | ||||  | || |||||| |||||||||||  |||||| ||||   |||||| |||||| |||||| || ||    
T  6716539 cttcacgaaaacgaccactgtaaaaacggtatctcacaccacccattgtcactactcac-ccccaacgaaa---caccccacaaaattaaactcccattc 6716634  T
Q  242 ctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaa-gatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccata 340  Q
    || || | ||||||| |||| ||||||  |||  |||||| ||||| ||||| ||| | |||||||||||||||| || | |||| ||||||||||||||    
T  6716635 ctcaa-caccaaagctgagccacatccggaaaaatcttatccgaaaagatcaatcagcttccaccacctctcgacttc-gatccaccgaaagaaaccata 6716732  T
Q  341 aaaagcccaaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc- 430  Q
    |||| ||||| ||||||||  | ||||||| ||||       |||||||||||||||||| | || |||| ||| |||||  |||||||||||||||||     
T  6716733 aaaaacccaagaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccc 6716832  T
Q  431 tcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaa 529  Q
    |||| |  ||||||| |||||| || ||||||| |||||| || |||||| || |||||||||||||| |||| ||| ||| ||||  | ||||||||||    
T  6716833 tcactctcggtacaccagagaaacatcaaatcaagccaaataagattgcagctagacaccgactcccgatctcaaagtaaaagtaactggcccaccgaaa 6716932  T
Q  530 accagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctc 629  Q
    |||||||| ||| ||||| |||||| ||||  |||||  |  |||||| ||||||||    ||| |||||||||    |||||||||| ||| || ||||    
T  6716933 accagcacgcaaaaagtaagacaaatgacataataagcagaagtgcaaacaacaaac----caaaaggaaaaggcactgctcaacggg-cccactccctc 6717027  T
Q  630 caaacaccctaaacaccttaacaactccaaaaaa 663  Q
    ||||||||||||||||||||| ||| ||||||||    
T  6717028 caaacaccctaaacaccttaaaaac-ccaaaaaa 6717060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 49 - 603
Target Start/End: Complemental strand, 3478721 - 3478164
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaa-actaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcat 147  Q
    ||||||||||||||||| || |||||||||||||||||| || | || ||  |||||| ||||||||||||| ||||||| || |||||||| ||||||     
T  3478721 cgtatataggcggaacacccgaaaataaacaccctaaaagacaatccagagcacaacatccaccaaaaaacaagtcaccaactcaaacagacgtcttcac 3478622  T
Q  148 gaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaa 247  Q
    |||  |||| |||||||||  ||||||||  || | || |||||||||||||  ||||||||||    ||| ||||||||| |||||| || |||| ||     
T  3478621 gaatacgac-actgtaaaagcgatatccatcaccaaccgtcgtcactactca--ccccaaagaa----cactcctcaaaattaaactcccagtcctcaa- 3478530  T
Q  248 ctccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagc 346  Q
    | |||||||  ||| |  ||  ||||| ||  || |||||||||||||| | ||| ||||||||||| ||||| |||| |||||||| |||| | |||||    
T  3478529 caccaaagcttagccaactcagaaaagttcacatccgaaagatcattcagcttccgccacctctcgatctccgatccaccgaaagaacacca-acaaagc 3478431  T
Q  347 ccaaaaccaaact--atccaaagagct-------gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcaccc 436  Q
    ||||||| || ||  | ||||||| ||       |||||||||||||||||||| | || |||| ||| || ||||||| ||||||||||||| ||||||    
T  3478430 ccaaaactaatcttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccctcaccc 3478331  T
Q  437 ctggtacactagagaac-accaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagc 535  Q
    | | |  |||||||||  |||  |||| ||||||  |||||||| || | |||||||||||| || ||||||||| ||||||| |||| |  |||  |||    
T  3478330 ccgatcaactagagaattaccctatcaagccaaaccaaattgcagctagtcaccgactcccgatcccgaagcaaaagtaatcggcccatcagaaatgagc 3478231  T
Q  536 acacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaagg 603  Q
    ||||||| || | ||||||||||| |||| |  ||||||||||| |||||  |||||| |||||||||    
T  3478230 acacaaccagcaagacaaacgacatgatatgcagtggtgcaagcgacaaa-taatcaaaaggaaaagg 3478164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 577
Target Start/End: Original strand, 16828973 - 16829180
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaa 469  Q
    ||||||||| ||||||||||   || |||| ||| || ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||     
T  16828973 gatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaagggcacccctcacccctgatacactagagaaacaccaaatcgcgccaac 16829072  T
Q  470 gaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtgg 569  Q
     || ||||||  | |||||| |||| |  ||| |||||||| ||||||| |||| || |||||||||||||| ||||  |||||||||||||||| |  |    
T  16829073 caagattgcaggtagacaccaactctcaatctggaagcaaaagtaatcgacccatcggaaaccagcacacaataagtttgacaaacgacaagatatgcag 16829172  T
Q  570 tggtgcaa 577  Q
    ||||||||    
T  16829173 tggtgcaa 16829180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 16954895 - 16954749
Alignment:
Q  14 agaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaa 113  Q
    ||||| ||||||||||| ||||||| ||||  |  |||||||||||||||||||| ||||||||||| ||||||||  ||||||||| |||| |||| ||    
T  16954895 agaccggtgaaactgag-atacaaataaaaggcaccgtatataggcggaacatccgaaaataaacacgctaaaaacacccctgaagaaaacaaccacaaa 16954797  T
Q  114 aaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactg 161  Q
    || ||||||||||||||||||||||| |||||| |||| | |||||||    
T  16954796 aatacacgtcaccacctaaaacagacatcttcaagaaaacaaccactg 16954749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 11 - 228
Target Start/End: Complemental strand, 33719375 - 33719160
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||| | ||||||||||| ||||||| |||   ||  | |||||||||||||||| |||  ||||||||||||||||   | ||| ||||||||||||    
T  33719375 cagagatcggtgaaactgagaatacaaacaaacggcgctgaatataggcggaacatcgaaag-taaacaccctaaaaacactcatgaggacaacacccac 33719277  T
Q  111 caaaaaacacgtcaccacctaaaacagacctcttcatgaaag-cgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaag 209  Q
    ||||| ||   ||||| |||||||| |||  |||||  |||  ||||| ||||||||| ||||||||| ||||| |||||||||||||||  ||||||||    
T  33719276 caaaatacctatcaccgcctaaaaccgactccttcacaaaaaacgacctctgtaaaaatgatatccaacactactcatcgtcactactca--ccccaaag 33719179  T
Q  210 aaaaaacacccctcaaaat 228  Q
    ||||||||||||| |||||    
T  33719178 aaaaaacacccctaaaaat 33719160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 379 - 547
Target Start/End: Complemental strand, 44755663 - 44755494
Alignment:
Q  379 aatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaagaaaatt 476  Q
    ||||||||||||| | || |||| ||| || ||||||||||||||||||||| ||||| | ||||||| |||||| |||||||||||| |||| |||||     
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcaccac-ggtacaccagagaaacaccaaatcacgtcaaacaaaata 44755565  T
Q  477 gcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagta 547  Q
    ||| || ||||||||||||||  ||| |||||||  |||| | |||||||  ||||||||||||| |||||    
T  44755564 gcagctagacaccgactcccgacctcaaagcaaaattaatgggcccaccgctaaccagcacacaaaaagta 44755494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 16828774 - 16828926
Alignment:
Q  14 agaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaa 113  Q
    ||||| ||||||||||| ||||||| ||||  || ||||||||||||||||| || |||||||||| |||| |||   ||||||||| |||| |||||||    
T  16828774 agaccggtgaaactgagaatacaaacaaaatgcgccgtatataggcggaacacccgaaaataaacatcctagaaatacccctgaagaaaacaaccaccaa 16828873  T
Q  114 aaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaa 166  Q
    || |||| ||| || ||||||| | || ||||| |||| | ||||||| ||||    
T  16828874 aatacacatcatcatctaaaactggccccttcaagaaaacaaccactgaaaaa 16828926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 33435153 - 33434982
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaacaccaaatcacgccaaag 470  Q
    |||||||||||||||||||| | |  |||| ||| ||  ||||||| |  ||||||||| || |||| ||||||| |||||| ||||||||| || |||     
T  33435153 gatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgcccccggtacaccagagaaaaccaaatcaagctaaac 33435054  T
Q  471 aaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
    ||| ||| ||||| ||| | |||| ||| |||||||||||| ||||||| ||||||| |||||| |||||||    
T  33435053 aaagattacaactagacccggactaccgatctcgaagcaaaagtaatcggcccaccggaaaccaacacacaa 33434982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 373 - 541
Target Start/End: Complemental strand, 38306304 - 38306133
Alignment:
Q  373 atctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaag 470  Q
    ||||||||||||||||||| | || |||| ||||||  ||||||| || |||||| ||||| ||||  |||||| |||| || ||||||||| | ||||     
T  38306304 atctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgccccctgtacaccagagaaaaaccaaatcaagtcaaac 38306205  T
Q  471 aaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
    ||| |||||| || ||| |||||||||| ||||||||| ||   || || ||||||||||||||||||||||    
T  38306204 aaagattgcagctagaccccgactcccgttctcgaagccaaatgaaccggcccaccgaaaaccagcacacaa 38306133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 599 - 651
Target Start/End: Original strand, 16829183 - 16829235
Alignment:
Q  599 aaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaac 651  Q
    ||||| ||| ||||||||||||||||||||||||| |||||||||||||||||    
T  16829183 aaaggcttaactcaacgggacccgctacctccaaaaaccctaaacaccttaac 16829235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 269 - 357
Target Start/End: Complemental strand, 44755745 - 44755657
Alignment:
Q  269 aaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaa 357  Q
    ||||| ||||||| | |||||||||||| | |||||||||| |||||||| | |  | |||||||||||||||||||||||||| ||||    
T  44755745 aaaaaactcttatccaaaagatcattcagcttccaccacctatcgacctctgatataccgaaagaaaccataaaaagcccaaaatcaaa 44755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 39013644 - 39013534
Alignment:
Q  19 agtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaac 118  Q
    |||||||||||| ||||||| || | |||| |||||||| ||||| | | ||||||||||||||| ||||| ||  ||| ||||||| |||  |||||||    
T  39013644 agtgaaactgagaatacaaacaagagacgttgtatatagacggaatacctaaaaataaacaccctgaaaacaactatgaggacaacatccattaaaaaac 39013545  T
Q  119 acgtcaccacc 129  Q
    || ||||||||    
T  39013544 acatcaccacc 39013534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 510
Target Start/End: Complemental strand, 34390006 - 34389866
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcac-cctcacccctggtacactagagaacaccaaatcacg-ccaaa 469  Q
    |||||||||||||||||||| | || |||| ||| ||  |||||||||| ||||||| |||||||||  |||||| ||||||||||| |||| | | |||    
T  34390006 gatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcactcctcacccccagtacaccagagaacaccatatcaagtcaaaa 34389907  T
Q  470 gaaaattgcaactggacaccgactcccggtctcgaagcaaa 510  Q
     |  ||||||||| |||||| ||| | | ||||||||||||    
T  34389906 catgattgcaactagacaccaacttctgatctcgaagcaaa 34389866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 6726090 - 6726144
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaaca 65  Q
    |||||| | ||||||||||| ||||||| |||||||| |||||||||||||||||    
T  6726090 cagagatcggtgaaactgagaatacaaacaaaaaacgccgtatataggcggaaca 6726144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 23983367 - 23983298
Alignment:
Q  265 atccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa 334  Q
    |||| |||||||| ||||||||||||||||||||   ||||||||||| ||||||| | || ||||||||    
T  23983367 atccgaaaagctcatattcgaaagatcattcaactgtcaccacctctcaacctccgatacaccgaaagaa 23983298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 23983526 - 23983427
Alignment:
Q  99 gacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactc 198  Q
    ||||||||||||||||| | ||  |||||||||||||||||   |||| |||| | ||||||| ||||| ||||| ||  |||||||||| |||||||||    
T  23983526 gacaacacccaccaaaataaacaccaccacctaaaacagactcattcacgaaaacaaccactg-aaaaacgatatacataactacccatcatcactactc 23983428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 28534281 - 28534328
Alignment:
Q  92 ccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagac 139  Q
    |||||| ||||||||||||||||| | || ||||||||||||||||||    
T  28534281 ccctgaggacaacacccaccaaaataaacatcaccacctaaaacagac 28534328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 6492860 - 6492930
Alignment:
Q  70 aaaataaacaccctaaaaactaccc-tgaagacaacacccaccaaaaaacacgtcaccacctaaaacagac 139  Q
    |||||||||||| ||||||  |||  ||| ||||||| |||||||||  ||||||||||||||||||||||    
T  6492860 aaaataaacaccataaaaaacacctatgaggacaacatccaccaaaattcacgtcaccacctaaaacagac 6492930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 13311883 - 13311825
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc 430  Q
    |||||||||||||||||||| | || |||| |||| ||||||||| |||| ||||||||    
T  13311883 gatctcgaatcaaaagtgatcggcccaccagactacatgaccaaaccagacgggcaccc 13311825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 430
Target Start/End: Original strand, 22568149 - 22568207
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc 430  Q
    |||| ||||||||||| |||||||| |||| || | |||||||||||||||| ||||||    
T  22568149 gatcacgaatcaaaagcgattgacctaccaaaccacatgaccaaatcagaagagcaccc 22568207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 36674859 - 36674809
Alignment:
Q  32 atacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccc 82  Q
    ||||||| ||||  |||||||||||||||||| |||| |||||||||||||    
T  36674859 atacaaacaaaaggcgtcgtatataggcggaatatccgaaaataaacaccc 36674809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 9107291 - 9107234
Alignment:
Q  295 caacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaa 352  Q
    |||||||||||||||||| |||||| | ||| ||||||||  || |||||||||||||    
T  9107291 caacatccaccacctctcaacctccttcccaccgaaagaacacaaaaaaagcccaaaa 9107234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 36674786 - 36674726
Alignment:
Q  125 ccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactaccca 186  Q
    |||||||||| ||||  ||||| ||||||||||||| |||||| |||||||||||| |||||    
T  36674786 ccacctaaaagagactacttca-gaaagcgaccactataaaaacgatatccaataccaccca 36674726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 44755970 - 44755906
Alignment:
Q  18 cagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccct 83  Q
    |||||||||| |||||||||| ||||  ||| ||||||||||| |||| || ||||||||||||||    
T  44755970 cagtgaaactaagcatacaaacaaaaggcgttgtatataggcgaaaca-cctaaaataaacaccct 44755906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 22567889 - 22567929
Alignment:
Q  99 gacaacacccaccaaaaaacacgtcaccacctaaaacagac 139  Q
    ||||||| ||||||||| |||| ||||||||||||||||||    
T  22567889 gacaacatccaccaaaatacacatcaccacctaaaacagac 22567929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 611 - 647
Target Start/End: Complemental strand, 33434913 - 33434877
Alignment:
Q  611 caacgggacccgctacctccaaacaccctaaacacct 647  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  33434913 caacgggacccgctccctccaaacaccctaaatacct 33434877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 38485695 - 38485620
Alignment:
Q  285 aaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaacta 360  Q
    |||||||||||| | |||||||||   | ||||||| ||||||||| ||| |||| |||||||||||||||||||||    
T  38485695 aaagatcattcagcttccaccaccgtgcaacctccggtccatcgaaggaacacca-aaaaagcccaaaaccaaacta 38485620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 155; Significance: 6e-82; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 11 - 663
Target Start/End: Complemental strand, 37117 - 36456
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccc-tgaagacaacaccca 109  Q
    |||||||| ||||||||||  ||||||| |||| |||  ||||||||||||||||||| |||||||||||| ||||||  |||| ||| ||| |||||||    
T  37117 cagagaccggtgaaactgataatacaaacaaaagacgctgtatataggcggaacatccgaaaataaacaccataaaaaacacccatgaggaccacaccca 37018  T
Q  110 ccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaag 209  Q
     ||||| |||||||||||||||||||||||  ||||| |||| | ||||||||||||| || ||||||  | | ||| ||||||||||||  ||||||||    
T  37017 acaaaatacacgtcaccacctaaaacagactccttcacgaaacc-accactgtaaaaacgacatccaa--ccatccaccgtcactactcac-ccccaaag 36922  T
Q  210 aaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacct 309  Q
    ||||| ||||||| ||||  || | | |  ||||||| | ||||||| |||| |||  | |||||||| ||  ||||||| |||||||| |||||||| |    
T  36921 aaaaa-cacccctaaaaaataaccccccg-tcctgaa-caccaaagctgagccacaatcgaaaagctcctaaccgaaagaccattcaacttccaccacat 36825  T
Q  310 ctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaactatc----caaagagctga-------tctcgaatcaaaagtgattgaccga 398  Q
    ||||||||||| |||| ||||||||| ||||||||| |||||||||||   |     |||||| ||||       ||||||||||||||||||   ||      
T  36824 ctcgacctccgatccaccgaaagaaatcataaaaagaccaaaaccaaaaagttgagacaaagaactgactcccgatctcgaatcaaaagtgatcagcccg 36725  T
Q  399 ccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactccc 496  Q
    ||| ||| || ||||||||||||||||||||| |||| |  ||||||| |||||| ||||||||||||||||| ||||||||| || ||||||||||||     
T  36724 ccagactttaggaccaaatcagaagggcacccctcactctcggtacaccagagaaacaccaaatcacgccaaacaaaattgcagctagacaccgactcct 36625  T
Q  497 ggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacac-aacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaata 595  Q
    | ||||||| ||||  |||||| ||||||| |||||| ||||| || ||| | |||||| |||| |||| | |||||||||| ||||||||| ||||| |    
T  36624 gatctcgaatcaaaattaatcggcccaccggaaaccaacacacaaaaaagaatgacaaatgacatgatatgcggtggtgcaaacaacaaacatatcaaaa 36525  T
Q  596 ggaaaaggtttagctcaacgggacccgctacctccaaacaccct-aaacaccttaacaactccaaaaaa 663  Q
    |||||||    ||||||||| || ||||| |||| ||||||||| ||||||||||||||| ||||||||    
T  36524 ggaaaagtcacagctcaacgagatccgcttcctctaaacaccctaaaacaccttaacaaccccaaaaaa 36456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 139; Significance: 2e-72; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 104 - 663
Target Start/End: Original strand, 22810925 - 22811490
Alignment:
Q  104 cacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagcc 203  Q
    |||||||||||| |||||||||| ||||||||||||  ||||| |||| ||||||||||||||| |||||||  ||| | ||||||||||||||||  ||    
T  22810925 cacccaccaaaatacacgtcacctcctaaaacagactgcttcacgaaaccgaccactgtaaaaacgatatcc--taccatccatcgtcactactcac-cc 22811021  T
Q  204 ccaaagaaaaaacacccctcaaa-atcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatcc 302  Q
    |||||||||||||  | || ||| || |||| | |  ||||||| | ||||||| |||| ||||||  ||| ||| ||  |  ||||   |||||| |||    
T  22811022 ccaaagaaaaaac--ctctaaaagataaaaccctccgtcctgaa-caccaaagctgagccacatccgcaaaactcctaaccagaagacatttcaacttcc 22811118  T
Q  303 accacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattg 393  Q
    |||||||||| ||||||  |||||||| ||||||||||||||||| |||||||||||  | ||||||| ||||       |||||||| |||| |||| |    
T  22811119 accacctctcaacctccaatccatcgagagaaaccataaaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcg 22811218  T
Q  394 accgaccatactatatgaccaaatcagaagggcac-cctcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccga 491  Q
     || |||| ||| || ||||||||||||||||||| ||||||||| | ||||| |||||| ||||||||||| ||||| |||||||||||| |||||| |    
T  22811219 gcccaccagactttaagaccaaatcagaagggcactcctcacccc-gatacaccagagaaacaccaaatcacaccaaacaaaattgcaactagacaccaa 22811317  T
Q  492 ctcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacac-aacaagtaggacaaacgacaagataagtggtggtgcaagc-aacaaacaaa 589  Q
     | ||| |||||||||||| |||| || |||||||||||||||||||| || ||| | |||||||||| | ||| | ||| |||||| | || ||||| |    
T  22811318 gttccgatctcgaagcaaaagtaaccgacccaccgaaaaccagcacacaaaaaagaatgacaaacgac-atatatgcggtagtgcaaacaaaaaaacata 22811416  T
Q  590 tcaataggaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaactccaaaaaa 663  Q
    |||| ||||||||| |||| ||||||||||||||| ||||||||| |||||||||||||||||||  |||||||    
T  22811417 tcaaaaggaaaaggcttagatcaacgggacccgcttcctccaaactccctaaacaccttaacaaccacaaaaaa 22811490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 92 - 643
Target Start/End: Complemental strand, 25753502 - 25752942
Alignment:
Q  92 ccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtc 191  Q
    |||||| ||||||||||||||||| ||| |||| ||||||||||| ||  ||||| ||||  | |||||||||||  | ||||||| |  |  |||||||    
T  25753502 ccctgaggacaacacccaccaaaatacaagtcatcacctaaaacaaactccttcacgaaaagggccactgtaaaatcggtatccaacatcattcatcgtc 25753403  T
Q  192 actactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatc 291  Q
    ||||||||  ||||||||||||| ||||||||||||| |||||  || |||||||  || ||||  || | ||||||||||||||  | | |||||||||    
T  25753402 actactcac-ccccaaagaaaaa-cacccctcaaaattaaactttcagtcctgaacatc-aaagttgaaccacatccaaaaagcttctctccgaaagatc 25753306  T
Q  292 attcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagctga-------tctcgaatc 382  Q
    ||||| | |||||  ||| |||||||||| |||| |||||||||| ||||||||||||||| ||||||  | ||||||| ||||       |||||||||    
T  25753305 attcagcttccactgcctatcgacctccgatccaccgaaagaaacaataaaaagcccaaaatcaaacttgagccaaagaactgactcccgatctcgaatc 25753206  T
Q  383 aaaagtgattgaccgaccatactatatgaccaaatcagaagggcac-cctcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaa 480  Q
    ||||||||| | || |||| ||| || |||||||| ||| |||||| ||||||| | ||||||| |||||| ||||| ||||||||||| || ||||||     
T  25753205 aaaagtgatcgccccaccagactttaggaccaaataagacgggcactcctcacctccggtacaccagagaaacaccacatcacgccaaacaagattgcag 25753106  T
Q  481 ctggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagca 580  Q
    || |||||||||||||| ||||||||||||  ||| |  |||| || ||||||||| |||| ||||| | |||||||||  ||| ||||| |||||| ||    
T  25753105 ctagacaccgactcccgatctcgaagcaaaattaagctgcccatcggaaaccagcaaacaaaaagtaaggcaaacgacataatatgtggttgtgcaaaca 25753006  T
Q  581 acaaacaaatcaataggaaaaggtttagct-caacgggacccgctacctccaaacaccctaaac 643  Q
    ||||| | ||||| ||||||||||| | || ||||  |||||||| | ||||||||||||||||    
T  25753005 acaaatatatcaaaaggaaaaggttcaactccaacatgacccgcttcttccaaacaccctaaac 25752942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 20 - 359
Target Start/End: Original strand, 16832700 - 16833036
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaaca 119  Q
    ||||||||||| ||||||| ||||  ||  | |||||||||||||| | ||||||||||||||||||||||  ||||| |||||||||||||||| || |    
T  16832700 gtgaaactgagaatacaaacaaaaggcgctgcatataggcggaacaccaaaaaataaacaccctaaaaactctcctgaggacaacacccaccaaataa-a 16832798  T
Q  120 cgtcaccacctaaaacagacctcttcatgaaag-cgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacac 218  Q
    ||||||||||||||||| |   || || ||||  ||||| ||||||||||||||||||| || |||| |||||||||||||  |||||||||||||||||    
T  16832799 cgtcaccacctaaaacatattcctgcacgaaaaacgaccgctgtaaaaaagatatccaacaccacccgtcgtcactactca--ccccaaagaaaaaacac 16832896  T
Q  219 ccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctc 318  Q
    |||||||||| ||||||||| || |||| | ||||||  |||| |||||| |||||||| ||| | |||||||||||| | || | ||||||| ||| ||    
T  16832897 ccctcaaaattaaactcacagtcttgaa-caccaaagttgagccacatccgaaaagctcatatcccaaagatcattcagcttcaatcacctcttgacttc 16832995  T
Q  319 cgttccatcgaaagaaaccataaaaagcccaaaaccaaact 359  Q
    ||  |||  |||||||||||||||||||||||| |||||||    
T  16832996 cgaaccactgaaagaaaccataaaaagcccaaatccaaact 16833036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 48 - 354
Target Start/End: Original strand, 41117676 - 41117977
Alignment:
Q  48 tcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcat 147  Q
    |||||||||||||||||| || ||||||||||||||||| |  ||| ||| ||||||||||||||||| |||  |||||||||| |||||||   | ||     
T  41117676 tcgtatataggcggaacacccgaaaataaacaccctaaataacaccatgaggacaacacccaccaaaatacatatcaccacctagaacagactcatgcac 41117775  T
Q  148 gaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaa 247  Q
    |||| | |||  |||||||| |||||||||  | ||||||||||| ||||||  ||||     |||||||||||||| ||| |||||| | ||| ||||     
T  41117776 gaaaacaaccgttgtaaaaacgatatccaa--ccacccatcgtcattactca--cccctttagaaaaacacccctcagaataaaactcccgatcatgaa- 41117870  T
Q  248 ctccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcc 347  Q
    | ||||| | |||| || |||  ||||||| |||||||||||||||||| | ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  41117871 caccaaacctgagccacctccgcaaagctcctattcgaaagatcattcagcttccaccacctctcgacctctgatccatcgaaagaaaccataaaaagcc 41117970  T
Q  348 caaaacc 354  Q
    |||||||    
T  41117971 caaaacc 41117977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 102 - 359
Target Start/End: Complemental strand, 48098651 - 48098399
Alignment:
Q  102 aacacccaccaaaaaacacgtcaccacctaaaacagacctctt-catgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaa 200  Q
    ||||||||||||| | |||||||||||||||||||   ||||| ||  ||| ||||||||||||||| ||||||||  || |||| |||||||||||||     
T  48098651 aacacccaccaaata-cacgtcaccacctaaaaca---ctctttcacaaaaacgaccactgtaaaaacgatatccatcacaacccgtcgtcactactcac 48098556  T
Q  201 gccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacat 300  Q
     |||||||||||| |||||||| ||||  |||||| || || | |||| ||||||  |||| |||||| |||||||| |||  |||||||| |||| | |    
T  48098555 -ccccaaagaaaatacacccctaaaaaataaactcccagtctt-aaacaccaaagttgagccacatccgaaaagctcctatctgaaagatcgttcatctt 48098458  T
Q  301 ccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact 359  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||    
T  48098457 ccaccacctctcgaccttcgatccatcgaaagaaactataaaaagcccaaaaccaaact 48098399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 250 - 531
Target Start/End: Original strand, 53823326 - 53823619
Alignment:
Q  250 ccaaagcagagcaacatccaaaaagctcttattcgaaa-gatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagccc 348  Q
    ||||||| |||| |||||| |||||||| ||| | ||| ||||| ||||| |||||||||||||||||| || || | |||||||||||||||||| |||    
T  53823326 ccaaagctgagccacatcctaaaagctcctatccaaaaagatcaatcaacttccaccacctctcgaccttcgatcaaccgaaagaaaccataaaaaaccc 53823425  T
Q  349 aaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccct 438  Q
    |||||||||||  | ||||||| ||||       ||||||||||||||||||||  | |||| ||| ||||||||||||||||||||| |||||||| |     
T  53823426 aaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccctcacctcc 53823525  T
Q  439 ggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaac 531  Q
    ||||||| |||| |||||||| ||| |||||  || ||||||  | |||||||||||||| |||||||||||| |||| || |||||| |||||    
T  53823526 ggtacaccagagaaacaccaagtcaagccaagcaagattgcagttagacaccgactcccgatctcgaagcaaaagtaaccggcccaccaaaaac 53823619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 102 - 354
Target Start/End: Complemental strand, 49528390 - 49528143
Alignment:
Q  102 aacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaag 201  Q
    ||||||||||||||||||||||| ||||||||| ||||  |||||||| | |||||||| | |||| ||||| ||  || | ||||| ||||||||| |     
T  49528390 aacacccaccaaaaaacacgtcatcacctaaaatagactccttcatgacaccgaccactattaaaacgatattca--accatccatcttcactactc-ac 49528294  T
Q  202 ccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatc 301  Q
    ||||  || |||||||||||||||||| |||||| || || || ||| ||||||| || | ||||||  ||||||  ||| |||||||||||||| | ||    
T  49528293 ccccttag-aaaaacacccctcaaaataaaactctcagtcttg-aacaccaaagctgaaccacatccgcaaagcttctatccgaaagatcattcatcttc 49528196  T
Q  302 caccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaacc 354  Q
    ||||||||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  49528195 caccacctcccgacctccgatccaccgaaagaaaccataaaaagcccaaaacc 49528143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 20 - 359
Target Start/End: Complemental strand, 49747929 - 49747593
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactacc-ctgaagacaacacccaccaaaaaac 118  Q
    |||||| | |||||||||| |||| || ||||||||| |||||||||||||||||||||||| ||||||  ||| |||| |||||||||||||||||  |    
T  49747929 gtgaaatttagcatacaaacaaaagacatcgtatatatgcggaacatccaaaaataaacaccataaaaaacacctctgaggacaacacccaccaaaattc 49747830  T
Q  119 acgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacac 218  Q
    | |||||||||||||||||||   |||| |||| |||||| |||||||| || |||||| ||  ||||| |||||||||| | ||| ||||||| |  ||    
T  49747829 atgtcaccacctaaaacagactctttcacgaaaacgaccattgtaaaaacga-atccaacaccgcccattgtcactactc-acccctaaagaaaca--ac 49747734  T
Q  219 ccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccacc-acctctcgacct 317  Q
    | ||| |||  |||||  |||||||   || |||||||  ||| |  ||| |||||||| |||  ||||||||||||||| | |||| |||| || ||||    
T  49747733 ctctctaaaataaacttccaatcct-tgacaccaaagctaagccatctccgaaaagctcatatatgaaagatcattcaacctacaccaacctatcaacct 49747635  T
Q  318 ccgttccatcgaaagaaaccataaaaagcccaaaaccaaact 359  Q
     || ||||  ||||||| ||||||||||| ||||||||||||    
T  49747634 tcgatccacagaaagaacccataaaaagctcaaaaccaaact 49747593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 55 - 354
Target Start/End: Original strand, 38636948 - 38637243
Alignment:
Q  55 taggcggaacatccaaaaataaacaccctaaaaactaccct-gaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagc 153  Q
    ||||||||||| |  |||||||||||| |||| |  ||||  || |||||||||||| |||| ||| |||||||||||||||| ||  ||||| |||| |    
T  38636948 taggcggaacacctgaaaataaacaccttaaataaaacccccgaggacaacacccacgaaaatacatgtcaccacctaaaacaaactccttcacgaaaac 38637047  T
Q  154 gaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaa 253  Q
     ||| ||||||||| |||||||||  | ||||||||||||||||||  ||||  ||||||| ||||||| | | | |||||| ||||| |||| | ||||    
T  38637048 aaccgctgtaaaaatgatatccaa--ccacccatcgtcactactcac-ccccttagaaaaa-caccccttatactaaaactcccaatcttgaa-caccaa 38637142  T
Q  254 agcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaac 353  Q
    ||  || |  | ||   |||||||||||  ||||||||||||| | ||||||||||||||||||||| |||| | |||||||||||||||||||||||||    
T  38637143 agttgaaccgcctcggcaaagctcttatctgaaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaaaccataaaaagcccaaaac 38637242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 372 - 599
Target Start/End: Original strand, 31050699 - 31050927
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaacaccaaatcacgccaaag 470  Q
    |||||||||||||||||||| | || |||| ||| ||  |||||||||| ||||||||| || |||| ||||||  | ||||||||| |||| | ||||     
T  31050699 gatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccctcgcccccggtacatcaaagaacaccatatcaagtcaaac 31050798  T
Q  471 aaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggt 570  Q
    |  |||||| || | ||||||||||||||||||||||||| |||| || ||||||| |||||| |||| || ||| | |||| |||||| |||||| |||    
T  31050799 aggattgcagctagtcaccgactcccggtctcgaagcaaaagtaaccggcccaccggaaaccaacacataataagcaagacagacgacatgataagcggt 31050898  T
Q  571 ggtgcaagcaacaaacaaatcaataggaa 599  Q
    ||||||| | || |||| ||||| |||||    
T  31050899 ggtgcaaacgacgaacacatcaaaaggaa 31050927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 300 - 511
Target Start/End: Original strand, 39420969 - 39421191
Alignment:
Q  300 tccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaa-ct-atccaaagagctga-------tctcgaatcaaaagtga 390  Q
    ||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||| || ||| || ||  |||       |||||||||||||||||    
T  39420969 tccaccacctctcgatctccgatccaccgaaaaaaaccataaaaagcccaaaaccaaaactgatctaaggaattgactcccgatctcgaatcaaaagtga 39421068  T
Q  391 ttgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacac 488  Q
    | | || ||||  ||||| ||||| ||||||||||||||| ||||||   ||||| ||||||| ||||||||||||||||| || |||||| || |||||    
T  39421069 tcggcccaccaggctataagaccatatcagaagggcacccctcaccctcagtacattagagaaacaccaaatcacgccaaacaagattgcagctagacac 39421168  T
Q  489 cgactcccggtctcgaagcaaac 511  Q
    ||| ||||| |||||||||||||    
T  39421169 cgattcccgatctcgaagcaaac 39421191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 49 - 177
Target Start/End: Original strand, 19311075 - 19311203
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatg 148  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| |||||  || |||||||||||||| |||||||||||||  |||||||   ||||| |    
T  19311075 cgtaaataggcggaacatccgaaattaaacaccctaaaaactcccctggggataacacccaccaaaatacacgtcaccaccataaacagattccttcacg 19311174  T
Q  149 aaagcgaccactgtaaaaaagatatccaa 177  Q
    ||| ||| ||||||||||| |||||||||    
T  19311175 aaaacgagcactgtaaaaacgatatccaa 19311203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 99 - 334
Target Start/End: Original strand, 19814978 - 19815210
Alignment:
Q  99 gacaacacccaccaaaaaacacgtcacc---acctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcacta 195  Q
    ||||||||||||||||||||||||||||   |||| |||||||| |||||| ||||  |||||| ||||||| |||||||||||| | || | |||||||    
T  19814978 gacaacacccaccaaaaaacacgtcaccagtacctcaaacagacgtcttcacgaaaatgaccacggtaaaaatgatatccaataccatccgttgtcacta 19815077  T
Q  196 ctcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattc 295  Q
    ||| | ||||||||    |||||  ||||| || |||||| || ||||  ||| ||||||   ||| |||||  ||||| || ||| ||||||||||||     
T  19815078 ctc-acccccaaag----aacacttctcaagattaaactctcagtcct-caacaccaaagtttagccacatcggaaaagttcctatccgaaagatcattt 19815171  T
Q  296 aacatccaccacctctcgacctccgttccatcgaaagaa 334  Q
    | | ||||||| ||||||||||||| |||| ||||||||    
T  19815172 agcttccaccatctctcgacctccggtccaccgaaagaa 19815210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 2061678 - 2061751
Alignment:
Q  284 gaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaa 357  Q
    ||||||||||||||| ||||||||||||||||||||| |||| ||||||||| ||| |||||||||||| ||||    
T  2061678 gaaagatcattcaacttccaccacctctcgacctccgatccaccgaaagaaatcatcaaaagcccaaaatcaaa 2061751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 52009184 - 52009083
Alignment:
Q  76 aacaccctaaaaactaccc-tgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatc 174  Q
    |||||||||||||  |||| ||| |||||| ||||||||||| |||| |||||||||||||||||  | ||||| |||||||||||||||||| ||||||    
T  52009184 aacaccctaaaaaacacccctgaggacaac-cccaccaaaaatcacgccaccacctaaaacagactccgtcatggaagcgaccactgtaaaaacgatatc 52009086  T
Q  175 caa 177  Q
    |||    
T  52009085 caa 52009083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 451 - 650
Target Start/End: Original strand, 38639526 - 38639727
Alignment:
Q  451 aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaa-accagcacacaacaagtagg 549  Q
    ||||||||||||| ||||| || |||| | || | ||||| |||||| ||||||||||||  ||| || ||||||| |  |||||||||||| ||||| |    
T  38639526 aacaccaaatcacaccaaacaatattgtagctaggcaccggctcccgatctcgaagcaaaactaaccggcccaccggagtaccagcacacaataagtatg 38639625  T
Q  550 acaaacga-caagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacacctt 648  Q
    |||||  | || |||||| |||||||||||||||||| | ||||| ||||||||| |  || ||| ||||| |||   |||| |||||| ||||||||||    
T  38639626 acaaaacatcatgataagcggtggtgcaagcaacaaaaagatcaaaaggaaaaggctcggcacaaagggactcgcattctcccaacaccttaaacacctt 38639725  T
Q  649 aa 650  Q
    ||    
T  38639726 aa 38639727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 654
Target Start/End: Complemental strand, 19673425 - 19672861
Alignment:
Q  97 aagacaacacccaccaaaaaacacgtcacc---acctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcac 193  Q
    |||| |||||||||||||||||||||||||   |||| |||||||| |||||| ||||  |||||||||||||   |||||||| || | || |||||||    
T  19673425 aagataacacccaccaaaaaacacgtcaccagtacctcaaacagacgtcttcacgaaaatgaccactgtaaaagcaatatccaacaccatccgtcgtcac 19673326  T
Q  194 tactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcat 293  Q
    ||||| | ||||||||    ||||| ||||||||| |||||| || ||||  ||| ||||||   ||| |||||| ||||| || ||| | ||| |||||    
T  19673325 tactc-acccccaaag----aacactcctcaaaattaaactctcagtcct-caacaccaaagtttagccacatccgaaaagttcatatccaaaatatcat 19673232  T
Q  294 tcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaact--atccaaaga-------gctgatctcgaatca 383  Q
    | | | ||||||| || ||||||  || |||| |||||||| |||| | ||| |||||||| |||||  | |||||||        |||||||||||| |    
T  19673231 ttagcttccaccatctatcgaccgtcgatccaccgaaagaacacca-acaaaacccaaaactaaacttgagccaaagaactgactcctgatctcgaat-a 19673134  T
Q  384 aaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaac 481  Q
    |||| || ||  | |||| ||| || ||||||| |||||||||| |||||||||| | |  || |||| || | || |||| |||||| || |||||| |    
T  19673133 aaagggaatggtccaccagactttaggaccaaaacagaagggcacccctcacccccgatcaaccagagaaatatcatatcaagccaaacaagattgcagc 19673034  T
Q  482 tggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaa 581  Q
    | ||||| |||||||| |||||||||||| |||| || ||||| | ||| || | |  || ||| | ||||||| ||| |||| | |||||||||| | |    
T  19673033 tagacactgactcccgatctcgaagcaaaagtaaccggcccactggaaatcaacgcgaaataagcaagacaaacaacatgatatgcggtggtgcaaacga 19672934  T
Q  582 caaacaaatcaataggaaaaggtttagctcaacgggacccgctacctcc-aaacaccctaaacaccttaacaac 654  Q
    ||||| |||||| ||||||||| | | ||||||| ||| |||  || || |||  |||||||||||||||||||    
T  19672933 caaac-aatcaaaaggaaaaggctcatctcaacgagacacgcaccccccaaaattccctaaacaccttaacaac 19672861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 50 - 134
Target Start/End: Original strand, 2061542 - 2061627
Alignment:
Q  50 gtatataggcggaacatccaaaaataaacaccctaaaaacta-ccctgaagacaacacccaccaaaaaacacgtcaccacctaaaa 134  Q
    ||||||||||||||||||  | ||||||||| ||||||| || |||||| | ||||||||| ||||| ||| ||||||||||||||    
T  2061542 gtatataggcggaacatctgataataaacacactaaaaaatacccctgagggcaacacccatcaaaatacaagtcaccacctaaaa 2061627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 25754282 - 25754207
Alignment:
Q  14 agaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaac 89  Q
    ||||||||  ||||||| ||||||| ||||| || ||||||||| |||||||||  |||||||||||| |||||||    
T  25754282 agaccagtataactgagaatacaaataaaaagcgccgtatatagacggaacatctgaaaataaacaccataaaaac 25754207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 199
Target Start/End: Original strand, 39420743 - 39420895
Alignment:
Q  47 gtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccc-tgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttc 145  Q
    ||||||||||||||||||| || ||||| |||||| ||||||  || | |||  | |||||| ||||||| ||||||||||| ||||||| |||  || |    
T  39420743 gtcgtatataggcggaacacccgaaaatgaacaccataaaaaacactcatgagcataacacc-accaaaatacacgtcaccatctaaaactgactcctac 39420841  T
Q  146 atgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactca 199  Q
    | || | | ||||| ||| ||| ||||||||| || |||| |||||||||||||    
T  39420842 acgagaacaaccaccgtataaacgatatccaacaccacccgtcgtcactactca 39420895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 129
Target Start/End: Original strand, 53823152 - 53823212
Alignment:
Q  70 aaaataaacaccctaaaaactaccc-tgaagacaacacccaccaaaaaacacgtcaccacc 129  Q
    ||||||||||||||||||| ||||| ||| || |||||||||||||| |||||||| ||||    
T  53823152 aaaataaacaccctaaaaaatacccctgaggataacacccaccaaaatacacgtcatcacc 53823212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 83
Target Start/End: Complemental strand, 42719565 - 42719494
Alignment:
Q  12 agagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccct 83  Q
    ||||||| ||||||||||| ||||||| |||| ||| |||||||| |||||| | |  ||||||||||||||    
T  42719565 agagaccggtgaaactgagaatacaaacaaaagacgccgtatataagcggaaaacctgaaaataaacaccct 42719494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 48098707 - 48098645
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccc 82  Q
    ||||||||||  ||||||| |||| |||  |||||||||||||||| || |||||||||||||    
T  48098707 gtgaaactgaaaatacaaacaaaagacgcagtatataggcggaacacccgaaaataaacaccc 48098645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 48 - 80
Target Start/End: Complemental strand, 46487653 - 46487621
Alignment:
Q  48 tcgtatataggcggaacatccaaaaataaacac 80  Q
    ||||||||||||||||||||| |||||||||||    
T  46487653 tcgtatataggcggaacatccgaaaataaacac 46487621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 469
Target Start/End: Complemental strand, 48098342 - 48098278
Alignment:
Q  407 tatgaccaaatcagaagggcacc-ctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    ||||||||||||||||||||||| |||||||  |||||||  ||| ||||||||||||| |||||    
T  48098342 tatgaccaaatcagaagggcacctctcaccctcggtacacctgagaaacaccaaatcacaccaaa 48098278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 8e-72; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 21 - 663
Target Start/End: Original strand, 10248246 - 10248881
Alignment:
Q  21 tgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatcc-aaaaataaacaccctaaaaactaccct-gaagacaacacccaccaaaaaac 118  Q
    |||||||||| ||||||   |||  |||||||||||||||||||| || ||||| ||||||| ||||||  ||||| || |||||||||| |||||| ||    
T  10248246 tgaaactgagaatacaacctaaaggcgtcgtatataggcggaacaccctaaaaaaaaacaccttaaaaaacacccttgaggacaacacccgccaaaatac 10248345  T
Q  119 acgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacac 218  Q
    |||||||||||||||||| ||  ||||| |||| ||||||||||||||| || |||| | |  ||||||||||||||||||  |||||| ||||   |||    
T  10248346 acgtcaccacctaaaacaaactccttcacgaaaacgaccactgtaaaaacgacatcccacaacacccatcgtcactactcaccccccaacgaaa---cac 10248442  T
Q  219 ccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctc 318  Q
    || ||||||| ||||||  | |||| || | ||||||  |||| |||||| |||||              |||| ||| | ||||||||||| || ||||    
T  10248443 ccgtcaaaattaaactctaagtcctcaa-caccaaagttgagccacatccgaaaag--------------atcaatcagcttccaccacctcgcggcctc 10248527  T
Q  319 cgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatat 409  Q
    || |||| | |||||||||||| |||||  |||||||||||  | ||||||| ||||       ||| |||||||||||||| |  | |||| | | ||     
T  10248528 cgatccaccaaaagaaaccatataaagcaaaaaaccaaacttgagccaaagaactgactcccgatcttgaatcaaaagtgatcggtccaccaaattttag 10248627  T
Q  410 gaccaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagc 507  Q
    ||| |||| |||||| ||||| ||||||| ||||||| |||||| |||||||||| |||||| ||||||||| || |||||||||||||| |||||||||    
T  10248628 gacaaaattagaaggacacccctcacccccggtacaccagagaaacaccaaatcaagccaaacaaaattgcagctagacaccgactcccgatctcgaagc 10248727  T
Q  508 aaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggttta 607  Q
    ||| ||||  | ||||||| |||||| ||||||| ||||| |||||||||||||  |||| ||||||||| |||||||| |||||| ||||| ||  | |    
T  10248728 aaaagtaactggcccaccggaaaccaccacacaa-aagtaagacaaacgacaaggcaagtagtggtgcaaacaacaaaccaatcaaaaggaatagactaa 10248826  T
Q  608 gctcaacgggacccgctacctccaaacaccctaaacaccttaacaactccaaaaaa 663  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||||| |||||||||    
T  10248827 gctcaacgggacctgctccctccaaacaccttaaacaccttaacaa-tccaaaaaa 10248881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 213 - 652
Target Start/End: Original strand, 17656872 - 17657324
Alignment:
Q  213 aaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctc 312  Q
    |||||||||||||||| |||||| ||||| |||| | ||||||  |||| || ||  |||||||| |||  ||||||||||||| | |||||||||| ||    
T  17656872 aaacacccctcaaaattaaactcccaatcatgaa-caccaaagttgagccacctctgaaaagctcctatatgaaagatcattcagcttccaccacctatc 17656970  T
Q  313 gacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagct-------gatctcgaatcaaaagtgattgaccgaccata 403  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||  | ||||||| ||       |||||||||||||||||||| |||| ||||||    
T  17656971 gacctccgatccaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaagtgatcgacccaccata 17657070  T
Q  404 ctatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtct 501  Q
    || || | |||| | ||||||||| |||||| ||| ||||||  |||| ||||||||||||||||||| || |||| | || | |||||||||||| |||    
T  17657071 ctttaggtccaacttagaagggcacccctcatccc-ggtacatcagagaaacaccaaatcacgccaaataagattgtagctagccaccgactcccgatct 17657169  T
Q  502 cgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaa----cgacaagataagtggtggtgcaagcaacaaacaaatcaatagg 597  Q
    |||||||||  ||| || |||| || |||||| ||||||| ||||| ||||||    ||||| ||||   ||||| |||  ||||||| | ||||| ||     
T  17657170 cgaagcaaaattaaccggcccatcggaaaccaacacacaaaaagtatgacaaacgatcgacatgatatacggtggagcacacaacaaatagatcaaaaga 17657269  T
Q  598 aaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaaca 652  Q
    ||||   | || ||||||||| ||||| |||||||||||| ||||||||||||||    
T  17657270 aaaactctcagttcaacgggatccgcttcctccaaacaccataaacaccttaaca 17657324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 12 - 199
Target Start/End: Original strand, 17656408 - 17656596
Alignment:
Q  12 agagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccacc 111  Q
    ||||||| |||||| ||| |||| ||| ||||  |||||||||||| ||||||| || ||||| ||||||||||||||  || ||| |||||||||||||    
T  17656408 agagaccggtgaaattgaacatataaacaaaaggcgtcgtatatagacggaacacccgaaaattaacaccctaaaaacacccttgaggacaacacccacc 17656507  T
Q  112 aaaaaacacgtcaccacctaaaacagacctcttcatg-aaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactca 199  Q
    ||||  |||||||||| |||||||||||  ||||| | ||| ||||||||| ||||| ||||||||| ||  | ||| |||||||||||    
T  17656508 aaaattcacgtcaccatctaaaacagactccttcaagaaaaacgaccactgcaaaaacgatatccaacaccgctcattgtcactactca 17656596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 12197781 - 12197949
Alignment:
Q  46 cgtcgtatataggcggaacatccaaaaataaacaccctaaaaactacc-ctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctctt 144  Q
    |||||| |||||||||||||    ||||||||||||||||||   ||| |||  ||||||||| || |||| ||||||||||||||| |||||||  |||    
T  12197781 cgtcgtctataggcggaacacgggaaaataaacaccctaaaagacacctctggggacaacacc-acaaaaatacacgtcaccacctacaacagacgcctt 12197879  T
Q  145 catgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaa 215  Q
    ||||||  ||||||||  ||||| ||||||||  || |||| |||||||||||| | ||||||||||||||    
T  12197880 catgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactc-acccccaaagaaaaaa 12197949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 12442209 - 12442377
Alignment:
Q  46 cgtcgtatataggcggaacatccaaaaataaacaccctaaaaactacc-ctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctctt 144  Q
    |||||| |||||||||||||    ||||||||||||||||||   ||| |||  ||||||||| || |||| ||||||||||||||| |||||||  |||    
T  12442209 cgtcgtctataggcggaacacgggaaaataaacaccctaaaagacacctctggggacaacacc-acaaaaatacacgtcaccacctacaacagacgcctt 12442307  T
Q  145 catgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaa 215  Q
    ||||||  ||||||||  ||||| ||||||||  || |||| |||||||||||| | ||||||||||||||    
T  12442308 catgaacacgaccactaaaaaaacgatatccagcaccacccgtcgtcactactc-acccccaaagaaaaaa 12442377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 263 - 359
Target Start/End: Original strand, 12197987 - 12198084
Alignment:
Q  263 acatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaact 359  Q
    |||||| |||||||| ||| |||||||||||| ||| |||| |||||||||||||||| ||||| ||||||| | || ||||||| ||||||||||||    
T  12197987 acatccgaaaagctcatatccgaaagatcattgaacttccatcacctctcgacctccgatccattgaaagaacatcaaaaaaagctcaaaaccaaact 12198084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 263 - 359
Target Start/End: Original strand, 12442415 - 12442512
Alignment:
Q  263 acatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaact 359  Q
    |||||| |||||||| ||| |||||||||||| ||| |||| |||||||||||||||| ||||| ||||||| | || ||||||| ||||||||||||    
T  12442415 acatccgaaaagctcatatccgaaagatcattgaacttccatcacctctcgacctccgatccattgaaagaacatcaaaaaaagctcaaaaccaaact 12442512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 371 - 541
Target Start/End: Original strand, 34389041 - 34389214
Alignment:
Q  371 tgatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaa 468  Q
    ||||||||||||||||||||| | || |||| ||||||  ||||||| || |||||| ||||| |||||||||||| |||| || ||||||||| | |||    
T  34389041 tgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcgcccctggtacaccagagaaaaaccaaatcaagtcaa 34389140  T
Q  469 a-gaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
    |  ||||||||| || ||| |||||||||| ||||||||| ||   || || || | |||||||||||||||||    
T  34389141 acaaaaattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctatcgaaaaccagcacacaa 34389214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 8862330 - 8862418
Alignment:
Q  49 cgtatataggcggaacatcc-aaaaataaacaccctaaaaactaccctgaag-acaacacccaccaaaaaacacgtcaccacctaaaac 135  Q
    ||||||||| |||||||||| ||||||||||||| ||||||  |||| |||| ||||||||||| |||| |||||||||||||||||||    
T  8862330 cgtatatagacggaacatccgaaaaataaacaccataaaaaacaccccgaaggacaacacccacaaaaatacacgtcaccacctaaaac 8862418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 376 - 541
Target Start/End: Original strand, 32066336 - 32066504
Alignment:
Q  376 tcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaagaaa 473  Q
    |||||||||||||||| | || |||| ||||||  ||||||| || |||||| ||||| |||| |||||||||||| || ||||||||| | |||| |||    
T  32066336 tcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccctcgcccccggtacactagagaaaaaccaaatcaagtcaaacaaa 32066435  T
Q  474 -attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||||||||| ||| |||| ||||| |||| |||| ||   || || ||||||||||||||||||||||    
T  32066436 gattgcaactagaccccgaatcccgatctcaaagccaaatgaaccggcccaccgaaaaccagcacacaa 32066504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 372 - 541
Target Start/End: Original strand, 37986895 - 37987067
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    ||||||||||||||| |||||| || |||| ||||||  ||||||| || |||||| ||||| |||| ||||||| |||| || ||||||||| | ||||    
T  37986895 gatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaatcaagtcaaa 37986994  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||| | ||||||| ||| |||||| ||| ||||||||| ||   || || ||||||||||||||||||||||    
T  37986995 taaagaatgcaactagaccccgactaccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaa 37987067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 372 - 452
Target Start/End: Original strand, 31207399 - 31207479
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccctcacccctggtacactagagaa 452  Q
    |||||||||||||||||||| | || |||| ||||||  ||||||| || ||||||||||| |||||||||||| ||||||    
T  31207399 gatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcaccctcgcccctggtacaccagagaa 31207479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 9519543 - 9519371
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    ||||||||||||||| |||| | || || | ||||||  ||||||| || |||||| |||||||||| ||||||| |||| || ||||||||| | ||||    
T  9519543 gatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccctcacccccggtacaccagagaaaaaccaaatcaagtcaaa 9519444  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||| |||||| || ||| |||||||||| ||||||||| ||   || || || || ||||||||||||||||    
T  9519443 caaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcctactgaaaaccagcacacaa 9519371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 541
Target Start/End: Original strand, 24995432 - 24995604
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    |||||||||||||||||||| | || |||| ||||||  ||||||| || | | || ||||| ||||  |||||| |||| || ||||||||| | ||||    
T  24995432 gatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcaagacacccctcgcccccagtacaccagagaaaaaccaaatcaagtcaaa 24995531  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||| |||||| || ||| |||||||||| ||||||||| ||   || || ||||||||||||||||||||||    
T  24995532 caaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaaccagcacacaa 24995604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 198
Target Start/End: Original strand, 43312399 - 43312497
Alignment:
Q  100 acaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactc 198  Q
    |||||||||| ||||| ||| ||||||||||||| |||||  || ||  ||| ||||||||||||||| ||||||| | || |  ||||||||||||||    
T  43312399 acaacacccatcaaaatacatgtcaccacctaaatcagactcctacacaaaaacgaccactgtaaaaacgatatcccacaccatacatcgtcactactc 43312497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 469
Target Start/End: Original strand, 15821416 - 15821514
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagagaacaccaaatcacgccaaa 469  Q
    ||||||||||||||||||||   || |||| ||| ||  |||||||||| |||||| ||||| |||  ||||||| ||||||||||| |||| ||||||    
T  15821416 gatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccctcgccctcggtacaccagagaacaccatatcaagccaaa 15821514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 51 - 175
Target Start/End: Original strand, 22325808 - 22325931
Alignment:
Q  51 tatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaa 150  Q
    ||||||||| |||||| ||||| |||||| |||||||||  || | | ||| ||||||||||||| | | |||||||  ||||||||||  ||| |  ||    
T  22325808 tatataggctgaacatgcaaaa-taaacatcctaaaaacacccataatgacgacacccaccaaaatataggtcaccatataaaacagactccttaacaaa 22325906  T
Q  151 agcgaccactgtaaaaaagatatcc 175  Q
    | |||||| |||||||| |||||||    
T  22325907 aacgaccattgtaaaaacgatatcc 22325931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 3e-68; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 11 - 654
Target Start/End: Complemental strand, 25648093 - 25647443
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||| | |||||||| || ||||||| ||||  ||  |||||||| ||||||| || ||||||||||||||||||||   | ||| ||| ||||||||    
T  25648093 cagagatcggtgaaactaagaatacaaacaaaaggcgcagtatatagacggaacacccgaaaataaacaccctaaaaacacacatgaggaccacacccac 25647994  T
Q  111 caaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaaga 210  Q
    |||| |||| |||||||| ||||||| ||  | ||| |||| | ||||||| ||||| |||||||||  | | ||||| ||||||||||  |||| ||      
T  25647993 caaataacatgtcaccacataaaacatactccatcacgaaacc-accactg-aaaaacgatatccaa--ccatccatcatcactactca--cccccaaat 25647900  T
Q  211 aaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctc 310  Q
    |||||||||||| ||||  || | |    ||||||  | ||||| | |||| || ||| |||||||| ||  |||||||||||||||| | |||||||||    
T  25647899 aaaaacacccctaaaaaataacccccacttcctgag-caccaaaactgagccacgtccgaaaagctcataaccgaaagatcattcaactttcaccacctc 25647801  T
Q  311 tcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaa--ct--atccaaagagct-------gatctcgaatcaaaagtgattgaccgac 399  Q
    |||||||||| |||| | ||||||||||||||||||| |||||||||  ||  | ||||||| |        |||||||||||||||||||| | ||       
T  25647800 tcgacctccgatccaccaaaagaaaccataaaaagcctaaaaccaaaaacttaagccaaagaaccaactcccgatctcgaatcaaaagtgataggcccgt 25647701  T
Q  400 catactatatgaccaaatcagaagggcaccct-cacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccg 497  Q
    || ||| || |||||||||||||||||||||| ||| || ||||||| |||||| ||||||||||||||||| | ||||||| || ||||||||||||||    
T  25647700 cagactttaggaccaaatcagaagggcacccttcactcccggtacaccagagaaacaccaaatcacgccaaacagaattgcagctagacaccgactcccg 25647601  T
Q  498 gtctcgaagcaaacgtaatcgccccaccgaaaaccagcacac-aacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaatag 596  Q
     |||||||||||| |||| || |||| || |||||| ||||| || ||| | ||||||||||| ||||    ||||||||| |||||||||  |||| ||    
T  25647600 ttctcgaagcaaaagtaaccggcccatcggaaaccaacacacaaaaaagaatgacaaacgacatgatatacagtggtgcaaacaacaaacaggtcaaaag 25647501  T
Q  597 gaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaac 654  Q
    |||||||   | ||||||||||| |||| |||||||||||||||||||||||||||||    
T  25647500 gaaaaggcacaactcaacgggactcgcttcctccaaacaccctaaacaccttaacaac 25647443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 95 - 663
Target Start/End: Complemental strand, 37123707 - 37123142
Alignment:
Q  95 tgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcact 194  Q
    ||||||||||||||||||||| |||| ||||||  ||||| |||| |||||| |||| ||||||||||||||| ||||||||| || |||  | ||||||    
T  37123707 tgaagacaacacccaccaaaatacacatcaccatataaaatagacttcttcacgaaaacgaccactgtaaaaacgatatccaacaccacctgttgtcact 37123608  T
Q  195 actcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcatt 294  Q
    |||||  | |||||||  || |||||||| |||| |||||| || ||| |||  || ||||| |||| ||||| |||| |||| | |  ||||||||||     
T  37123607 actcac-cgccaaagatgaa-cacccctccaaattaaactctcagtccagaacatc-aaagctgagccacatcgaaaa-gctcatgtctgaaagatcata 37123512  T
Q  295 caacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagctga-------tctcgaatcaaa 385  Q
    || | |||||||||| |||| ||||| ||| |||||||||||||||||||||||||||||||| |  ||||||||| ||||       ||||||||||||    
T  37123511 cagcttccaccacctatcgaactccgatcc-tcgaaagaaaccataaaaagcccaaaaccaaatttgatccaaagaactgactcccaatctcgaatcaaa 37123413  T
Q  386 agtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactg 483  Q
    |||||| | || |||| | | || ||||||| || |||||||||| || ||   ||||||  |||||| ||||||||||||||||| ||||||||| ||     
T  37123412 agtgatcggcccaccaaaatttaggaccaaaacataagggcacccctctccttcggtacatcagagaaacaccaaatcacgccaaacaaaattgcagcta 37123313  T
Q  484 gacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaaca 583  Q
    |||||||||||||| |||||||||||| |||||        ||||||||||||||||| ||||| |||||| | || |||  | |  ||||||| ||||     
T  37123312 gacaccgactcccgatctcgaagcaaaagtaat--------cgaaaaccagcacacaaaaagtatgacaaatg-catgatgtgcgaaggtgcaaacaacc 37123222  T
Q  584 aacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaactccaaaaaa 663  Q
    | || ||||| ||||||||  | | ||||| || ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  37123221 agcagatcaaaaggaaaagactcaactcaatggaacccgcttcctccaaacaccctaaactccttaacaaccccaaaaaa 37123142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 11 - 662
Target Start/End: Complemental strand, 14194340 - 14193690
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||||||||||||||||| | ||||| ||||   | | |||||||||||||||||| |||||||||| |||||||||   | ||| ||| ||||||||    
T  14194340 cagagaccagtgaaactgagaacacaaacaaaaggtgccttatataggcggaacatccgaaaataaacatcctaaaaacactcatgaggaccacacccac 14194241  T
Q  111 caaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaaga 210  Q
    ||||| |||||||||||||||||||||||  | ||| |||| || |||||| || || |||||||||  | | ||||||||||||||||  |||||||      
T  14194240 caaaatacacgtcaccacctaaaacagactccatcacgaaatcg-ccactg-aataacgatatccaa--ccatccatcgtcactactca--ccccaaaat 14194147  T
Q  211 aaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctc 310  Q
    |||||||||| | ||||  || | |    |||||| |  ||||| | |||| || ||| |||||||| ||  |||||||  ||||| | ||||| |||||    
T  14194146 aaaaacacccttaaaaaataacccccacttcctgagaa-ccaaaactgagccacgtccgaaaagctcctaaccgaaagacaattcagcttccac-acctc 14194049  T
Q  311 tcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaa--ct--atccaaagagctga-------tctcgaatcaaaagtgattgaccgac 399  Q
    ||||||||||        |||||||||||||||||||||||||||||  ||  | ||||||| | ||       |||||||||||||||||| |  |  |    
T  14194048 tcgacctccg--------aaagaaaccataaaaagcccaaaaccaaaaacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgc 14193957  T
Q  400 catactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaacac--caaatcacgccaaagaaaattgcaactggacaccgactccc 496  Q
    || ||| || ||||||||||||||||||||| |||| || ||||||| | |||||||  |||||||||||||  | ||||| | || |||||||||||||    
T  14193956 cagactttaggaccaaatcagaagggcacccctcactcccggtacaccaaagaacacaccaaatcacgccaagcagaattgtagctagacaccgactccc 14193857  T
Q  497 ggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaa-gtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaata 595  Q
    | | |||||||||| ||| ||| | || |  |||| ||||||||| || | | ||||||||||  ||||   ||||||| || ||| |||| |||||| |    
T  14193856 gatatcgaagcaaaagtagtcggcgcatcagaaactagcacacaaaaaagaatgacaaacgacttgatatacggtggtgtaaacaagaaacgaatcaaaa 14193757  T
Q  596 ggaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaactccaaaaa 662  Q
    ||||||||   | ||||||||||| |||| |||||||| |||||||||||||||||||| |||||||    
T  14193756 ggaaaaggcacaactcaacgggactcgcttcctccaaaaaccctaaacaccttaacaaccccaaaaa 14193690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 125 - 598
Target Start/End: Original strand, 14755047 - 14755528
Alignment:
Q  125 ccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccc-tc 223  Q
    |||||||||||||||| ||||| ||||||||||| |||||||| |||||| ||||| | |||||| | ||||   | |||||||| ||||||||||| |     
T  14755047 ccacctaaaacagaccccttcacgaaagcgaccattgtaaaaacgatatctaataccatccatcgccgctacc--acccccaaaggaaaaacaccccctt 14755144  T
Q  224 aaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttc 323  Q
    |||| |||||||  || ||| || | ||||||| |||| |||||||| |||||| |   |||||||||||||||| ||||||| ||||||||||||| ||    
T  14755145 aaaaacaaactcttaaaccttaa-caccaaagctgagccacatccaacaagctcatccccgaaagatcattcaacttccaccatctctcgacctccgatc 14755243  T
Q  324 catcgaaagaaaccataaaaagcccaaaaccaaact---atccaaagagct-------gatctcgaatcaaaagtgattgaccgaccatactatatgacc 413  Q
    ||||||||||||| |||||||||||||| |||| ||   | ||||||| ||       ||||| |||||||||||||| | || |||| ||| ||  ||     
T  14755244 catcgaaagaaacaataaaaagcccaaatccaacctcgaaaccaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccagactttagcaca 14755343  T
Q  414 aaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaac 511  Q
    |||  | ||||||| ||||||||   ||||||| |||| ||||||||| | ||| ||| || |||||| || || ||||||||||| ||||||||||||     
T  14755344 aaa--aaaagggcacccctcaccttcggtacaccagagaaacaccaaaacgcgcgaaacaagattgcagctagataccgactcccgatctcgaagcaaaa 14755441  T
Q  512 gtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaatagga 598  Q
    |||| || |||| || ||| |||||||||| ||| | | |||| |||| |||| | | | |||||| |||| |||||||||| ||||    
T  14755442 gtaaccggcccatcggaaatcagcacacaaaaagaatggcaaatgacatgatatgcgatagtgcaaacaacgaacaaatcaaaagga 14755528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 412 - 663
Target Start/End: Original strand, 4464013 - 4464266
Alignment:
Q  412 ccaaatcagaagggcaccc-tcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaa 509  Q
    ||||||||||||||||||| ||||||  ||||||| |||||| ||||||||||||||| | || ||||||||| |||||||||||||| |||||||||||    
T  4464013 ccaaatcagaagggcacccctcaccctcggtacac-agagaaacaccaaatcacgccacacaagattgcaactagacaccgactcccgatctcgaagcaa 4464111  T
Q  510 acgtaatcgccccaccg-aaaaccagcacacaacaagtaggac-aaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggttta 607  Q
    | |||| || ||||||| ||||||| ||||||| ||| | ||| ||||||||||||||| |||||||||| ||||||||  ||||| ||||||| | | |    
T  4464112 aagtaaccggcccaccgaaaaaccaacacacaaaaaggatgacaaaacgacaagataagcggtggtgcaaacaacaaaccgatcaaaaggaaaaagctca 4464211  T
Q  608 gctcaacgggacccgctacctccaaacaccctaaacaccttaacaactccaaaaaa 663  Q
    ||  || || ||||||| ||||||||| || ||||||||| |||||| ||||||||    
T  4464212 gcagaaaggaacccgct-cctccaaactccataaacacctaaacaaccccaaaaaa 4464266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 49 - 356
Target Start/End: Original strand, 28937431 - 28937726
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatg 148  Q
    |||||||| |||||||| || |||||||||||||||||||| ||||  | |||||||||||||||||         |||||||||||||||| ||||| |    
T  28937431 cgtatataagcggaacacccgaaaataaacaccctaaaaac-accccaatgacaacacccaccaaaat--------ccacctaaaacagaccccttcacg 28937521  T
Q  149 aaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaac 248  Q
    |||| |||||||||||||| |||||||||||| |||||||| |||||||| | | ||||  ||||||||||||| |||| |||||||  |  |||| |||    
T  28937522 aaagtgaccactgtaaaaacgatatccaataccacccatcgccactactc-acctccaagtaaaaaacacccctaaaaaacaaactcctagacctg-aac 28937619  T
Q  249 tccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagccc 348  Q
      |||||  |||| ||||||||||||||| |    |||| |||||||| | ||||||| |||| |||||||| |||| ||||||||||||||||||||||    
T  28937620 atcaaag-tgagccacatccaaaaagctcctccctgaaacatcattcagcttccaccatctcttgacctccgatccaccgaaagaaaccataaaaagccc 28937718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 12 - 254
Target Start/End: Complemental strand, 41039566 - 41039332
Alignment:
Q  12 agagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccacc 111  Q
    ||||| |||||||||  |||||||||||||||  | || ||||||||||||||| |  ||||||||||||||||||||  || |||||||||||||||||    
T  41039566 agagatcagtgaaaccaagcatacaaagaaaatgcatcatatataggcggaacaccagaaaataaacaccctaaaaacacccgtgaagacaacacccacc 41039467  T
Q  112 aaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaa 211  Q
    |||||| |  | | |||||||||||||    ||||  |||||||||       ||| ||||| ||||||||| |||| ||||||||||  ||| ||| ||    
T  41039466 aaaaaa-atattatcacctaaaacagattctttcacaaaagcgacc-------aaacgatatacaatactacacatcttcactactcacccccaaaaaaa 41039375  T
Q  212 aaaacacccctcaaaatcaaactcacaatcctgaaactccaaa 254  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||    
T  41039374 aaaacacacctcaaaatcaaactcacagtcctcaaactccaaa 41039332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 153 - 357
Target Start/End: Complemental strand, 14879705 - 14879504
Alignment:
Q  153 cgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactcca 252  Q
    ||||||||| ||||| ||||||||| || || ||||||||||| |||  |||| ||  |||||||||||||||||| |||||| ||  | |||| | |||    
T  14879705 cgaccactgaaaaaacgatatccaacaccacacatcgtcactattca--ccccgaaagaaaaacacccctcaaaattaaactcccagacttgaa-cacca 14879609  T
Q  253 aagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaa 352  Q
    || | |||| |||||| |||||||| |||  ||||||||||| | | ||||||||||||||||||||  |||| ||||||||||||||||||| ||||||    
T  14879608 aacccgagccacatccgaaaagctcctatctgaaagatcattaagcttccaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaaa 14879509  T
Q  353 ccaaa 357  Q
    |||||    
T  14879508 ccaaa 14879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 4171154 - 4170967
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||||| ||||||||||| ||||||| ||||  |||||||||||||||||||| |  ||||||||||||||||||||  |  ||| ||||||||||||    
T  4171154 cagagaccggtgaaactgagaatacaaacaaaaggcgtcgtatataggcggaacacctgaaaataaacaccctaaaaacatcattgaggacaacacccac 4171055  T
Q  111 caaaaa-acacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactca 199  Q
     ||||| | |||||| ||||||||| ||||  ||||| ||||  ||||| |||| ||| ||||||||  || | ||||||||||||||||    
T  4171054 aaaaaatatacgtcatcacctaaaatagactccttcacgaaaatgaccattgtataaatgatatcca--accatccatcgtcactactca 4170967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 50518760 - 50518945
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccac 110  Q
    |||||||  ||||||||||| ||||||| ||||   ||||||||||||||||||| || ||||||||||||||||||||  || ||| ||| |||||||     
T  50518760 cagagactggtgaaactgagaatacaaacaaaaggtgtcgtatataggcggaacacccgaaaataaacaccctaaaaacacccatgaggaccacacccaa 50518859  T
Q  111 caaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactca 199  Q
    ||||| |||| |||||| |||||||||||  ||||| || | | ||||||||||||| |||||| |  || | ||||||||||||||||    
T  50518860 caaaatacacctcaccatctaaaacagactccttcacgata-ccaccactgtaaaaacgatatcta--acgatccatcgtcactactca 50518945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 20 - 352
Target Start/End: Original strand, 33143632 - 33143956
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaaca 119  Q
    ||||||||||| ||||||  ||||  |||| ||||||||||||||| || |||| |||||||| ||||||| ||  || || |||| |||||| ||||||    
T  33143632 gtgaaactgagaatacaaccaaaaggcgtcatatataggcggaacacccgaaaa-aaacacccaaaaaactcccaagaggataacatccaccataaaaca 33143730  T
Q  120 cgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacc 219  Q
    ||||||||||||||||| ||  ||||| |||| | ||||||| | ||| |||||||||  | | || |||||||||||||  |||  ||||||| | |||    
T  33143731 cgtcaccacctaaaacaaactccttcacgaaaaccaccactgaacaaacgatatccaaccccatccgtcgtcactactca--cccttaagaaaaca-acc 33143827  T
Q  220 cctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctcc 319  Q
    ||||| |   ||| || || |||  |||| ||||||| || | ||| | ||||| ||| |||   | |||||| ||| | ||||||||||| |||||||     
T  33143828 cctcaga---aaaatcccattcc-aaaacaccaaagctgatccacaacgaaaaaactcctatataagagatcaatcagcttccaccacctcgcgacctct 33143923  T
Q  320 gttccatcgaaagaaaccataaaaagcccaaaa 352  Q
    | |||| ||||||||||||||||||||||||||    
T  33143924 gatccaccgaaagaaaccataaaaagcccaaaa 33143956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 48893034 - 48893152
Alignment:
Q  21 tgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacac 120  Q
    |||||||||| ||||||| |||  | | |||||||| | ||||||||| |||||||||||  |||||||  |||||||||||||||||||||||| |||     
T  48893034 tgaaactgagaatacaaacaaacgatgccgtatataagaggaacatccgaaaataaacactttaaaaacacccctgaagacaacacccaccaaaatacat 48893133  T
Q  121 gtcaccacctaaaacagac 139  Q
    |||||||||||||| ||||    
T  48893134 gtcaccacctaaaagagac 48893152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 372 - 510
Target Start/End: Original strand, 23328387 - 23328526
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaacaccaaatcacgccaaag 470  Q
    |||||||||||||||||||| |  | |||| ||| ||  |||||||||  ||||||||| || |||| ||||||| ||||||||||| |||| | ||||     
T  23328387 gatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccctcgcccccggtacaccagagaacaccatatcaagtcaaac 23328486  T
Q  471 aaaattgcaactggacaccgactcccggtctcgaagcaaa 510  Q
    ||||||||| || |||||| ||||||| ||||||||||||    
T  23328487 aaaattgcagctagacaccaactcccgatctcgaagcaaa 23328526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 14280258 - 14280345
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacag 137  Q
    ||||||||||||||||| || ||| ||||||| || |||| || ||||| |||||||||||| |||| |||||||||||||||||||||    
T  14280258 cgtatataggcggaacacccgaaagtaaacactctgaaaa-tatcctgaggacaacacccactaaaatacacgtcaccacctaaaacag 14280345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 547
Target Start/End: Complemental strand, 19176546 - 19176369
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccctcacccctggtacactagag-aacaccaaatcacgccaaag 470  Q
    |||||||||||||||||||| | || |||| ||| ||  ||||||| || ||||||||||||| || ||||||  |||| || ||||||| | | ||||     
T  19176546 gatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcaccctcactcccggtacatcagagaaaaaccaaattaagtcaaac 19176447  T
Q  471 aaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagta 547  Q
    ||| |||||| || ||| |||||||| | ||||||||| || | || |  |||||||||||||||||||||| |||||    
T  19176446 aaagattgcagctagaccccgactcctgatctcgaagccaaaggaaccagcccaccgaaaaccagcacacaataagta 19176369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 12086623 - 12086463
Alignment:
Q  40 aaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctg-aagacaacacccaccaaaaaacacgtcaccacctaaaacaga 138  Q
    |||||||  |||||| ||||||||||| | |||||||||| | |||||  |||||   ||||| ||||||||||||| | || |||||||||||||||||    
T  12086623 aaaaaacaccgtataaaggcggaacattcgaaaataaacatcttaaaagataccccctaagaccacacccaccaaaataaacatcaccacctaaaacaga 12086524  T
Q  139 cctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactca 199  Q
      | |||| |||| ||| ||||||||||| ||||| ||| || ||  ||||||| ||||||    
T  12086523 tgtattcaagaaaacgatcactgtaaaaacgatattcaacacgacatatcgtcagtactca 12086463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 510
Target Start/End: Original strand, 40023609 - 40023748
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccctcacccctggtacactagagaacaccaaatcacg-ccaaag 470  Q
    |||||||||||||||||||| |  | |||| ||| ||  || ||||||| ||||||||||| |||| ||||||||||||||||||| |||| | | |||     
T  40023609 gatctcgaatcaaaagtgatcggtccaccagactttaaaacaaaatcagcagggcaccctcgcccccggtacactagagaacaccatatcaagtcaaaac 40023708  T
Q  471 aaaattgcaactggacaccgactcccggtctcgaagcaaa 510  Q
    |  |||||| || |||||| ||| ||| ||||||||||||    
T  40023709 atgattgcagctagacaccaacttccgatctcgaagcaaa 40023748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 4463862 - 4463936
Alignment:
Q  102 aacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaat 178  Q
    ||||||||||||||||||  ||||||||||||| | || ||||||||| | ||||||||||||||| ||||| ||||    
T  4463862 aacacccaccaaaaaaca--tcaccacctaaaataaacttcttcatgacaccgaccactgtaaaaacgatattcaat 4463936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 235
Target Start/End: Complemental strand, 7105148 - 7105032
Alignment:
Q  114 aaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaa 213  Q
    |||||| ||||||||||||||||||| |||||| |||| | | |||| ||||||   ||||||  || ||||||||||||||||||  ||||||||   |    
T  7105148 aaaacatgtcaccacctaaaacagacttcttcaagaaaacaagcactataaaaacagtatccaccaccacccatcgtcactactca--ccccaaag---a 7105054  T
Q  214 aacacccctcaaaatcaaactc 235  Q
    ||||||||| ||||| ||||||    
T  7105053 aacaccccttaaaataaaactc 7105032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 372 - 561
Target Start/End: Original strand, 34475791 - 34475983
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaacac-caaatcacgccaaa 469  Q
    |||||||||||||||||||| | || |||| ||||||  | ||||| || ||||||||| || |||| ||||||| |||||| |  |||| || | ||||    
T  34475791 gatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccctcgcccccggtacaccagagaaaaatcaaaccaagtcaaa 34475890  T
Q  470 gaaaa-ttgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaag 561  Q
     |||| ||||| || ||| |||||||||| ||||||||| ||   ||||| |||| ||||||||||||||| | | ||| |||||| ||||||    
T  34475891 caaaaattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccagcacacgatatgtaagacaaaagacaag 34475983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 285 - 359
Target Start/End: Complemental strand, 27399099 - 27399024
Alignment:
Q  285 aaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaact 359  Q
    |||||||||||| || |||||||||||| ||||| | |||| | |||||| |||| ||||||||||||||||||||    
T  27399099 aaagatcattcagcaaccaccacctctcaacctctggtccaccaaaagaacaccaaaaaaagcccaaaaccaaact 27399024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 14893340 - 14893262
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaac 89  Q
    |||||||  ||||||| |||  |||||| |||| ||| ||||||||||||||||| |  ||||||||||||||||||||    
T  14893340 cagagactggtgaaaccgagagtacaaacaaaagacgccgtatataggcggaacacctgaaaataaacaccctaaaaac 14893262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 285 - 359
Target Start/End: Original strand, 1652827 - 1652901
Alignment:
Q  285 aaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaact 359  Q
    |||||||||||||| ||| ||||| ||  ||||||| |||| |||||||| |||| ||||||||||||||||||||    
T  1652827 aaagatcattcaacttccgccaccgcttaacctccggtccaccgaaagaacacca-aaaaagcccaaaaccaaact 1652901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 14879479 - 14879421
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc 430  Q
    |||||||||||||||||||| | || |||| ||| || |||| ||||||||||||||||    
T  14879479 gatctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcaccc 14879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 20611827 - 20611655
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaaca-ccaaatcacgccaaa 469  Q
    ||||||||||||||| |||| | || | || ||||||  || |||| || ||||||||| || |||| ||||||| |||||| | |||||||| | ||||    
T  20611827 gatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccctcgcccccggtacaccagagaaaaaccaaatcaagtcaaa 20611728  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||| |||||| || ||| |||||||| | ||||||| | ||   || || ||||||||||||||||||||||    
T  20611727 caaagattgcagctagaccccgactcctgatctcgaaaccaaatgaaccgacccaccgaaaaccagcacacaa 20611655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 25594308 - 25594406
Alignment:
Q  99 gacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactc 198  Q
    |||||||||||||| || | || |||| |||||||||| ||  |||||  ||| ||||||||| ||||| ||||||||| || |||||||| ||||||||    
T  25594308 gacaacacccaccacaataaacatcactacctaaaacatactccttca-caaaacgaccactgaaaaaacgatatccaa-accacccatcgccactactc 25594405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 123; Significance: 8e-63; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 12 - 552
Target Start/End: Complemental strand, 58537 - 57989
Alignment:
Q  12 agagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccacc 111  Q
    ||||||| ||||||| ||  ||| ||| ||||  || ||||||||||  ||||| ||||||||||| |||||||||||  || |||  ||| || |  ||    
T  58537 agagaccggtgaaacagataatagaaacaaaaggcgccgtatataggtagaacacccaaaaataaataccctaaaaacacccatgagaacaccatcagcc 58438  T
Q  112 aaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaa 211  Q
    |||  |||| |||||||| |||||||||  ||||| |||| |||||| |||||||  ||||||||| ||||||| |||||||||||||  ||| ||||||    
T  58437 aaagtacacatcaccaccaaaaacagactccttcacgaaaacgaccattgtaaaactgatatccaacactacccgtcgtcactactcacaccc-aaagaa 58339  T
Q  212 aaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctct 311  Q
     || ||| ||||||||| |||||| || ||| ||| | ||||||| |||| |||| | |||||||||||| |||||||| ||||| | |||| || ||||    
T  58338 caa-cactcctcaaaattaaactctcagtcccgaa-caccaaagctgagccacattcgaaaagctcttatccgaaagataattcagcttccatcatctct 58241  T
Q  312 cgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaaga-------gctgatctcgaatcaaaagtgattgaccgaccat 402  Q
    ||||||||| |||| ||||||||||||||||||||| |||||||||||  ||||||| |        | ||||| |||||||||||||| | || ||||     
T  58240 cgacctccgatccaccgaaagaaaccataaaaagcctaaaaccaaacttgatccaaacaattgacttccgatcttgaatcaaaagtgatcggcccaccaa 58141  T
Q  403 actatatgaccaaatcagaagggcaccct-cacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtc 500  Q
    ||| || ||||||||| |||||||||| | |||||  ||||||| |||| ||||||||||||||||||| || |||||| || |||| ||||||||| ||    
T  58140 actttaggaccaaatctgaagggcaccatacaccctaggtacaccagagaaacaccaaatcacgccaaacaagattgcagctagacaacgactcccgatc 58041  T
Q  501 tcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggaca 552  Q
    |||||||||| |||| || || |  | ||| |||||||||| ||||| ||||    
T  58040 tcgaagcaaaagtaaccggcctaatggaaatcagcacacaaaaagtatgaca 57989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 622 - 663
Target Start/End: Complemental strand, 57985 - 57945
Alignment:
Q  622 gctacctccaaacaccctaaacaccttaacaactccaaaaaa 663  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  57985 gctacctccaaacaccctaaacaccttaacaac-ccaaaaaa 57945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 250 - 662
Target Start/End: Original strand, 42043 - 42468
Alignment:
Q  250 ccaaagcagagcaacatccaaaaagctcttattcgaaa-gatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagccc 348  Q
    |||||||||||| |||| | |||||||| ||| ||||| ||| ||||| | ||||||| ||||||||||||| ||||  ||||||||||||||||| |||    
T  42043 ccaaagcagagccacattcgaaaagctcctatccgaaaagattattcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaaatccc 42142  T
Q  349 aaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccct 438  Q
    |||||||||||  | ||||||| ||||       |||||||||||||||||| | || |||| ||| || ||| ||||||||||||||||| |||||  |    
T  42143 aaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccctcaccttt 42242  T
Q  439 ggtacactagagaa-caccaaatcacgccaaagaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagca 536  Q
    |||| || |||||| || ||||| | ||||||  || | |||| || |||| ||||||||| ||||||||||||  ||| || |||| ||  ||||||||    
T  42243 ggtataccagagaaacatcaaattaagccaaaacaagaatgcagctagacatcgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagca 42342  T
Q  537 cacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaacac 636  Q
     ||||  |||| ||||||||||| ||||  ||||||||||| ||||||||| ||| | ||||||||| ||||||||| | || | ||| |||||||||||    
T  42343 tacaaacagtaagacaaacgacatgatagatggtggtgcaaacaacaaacatatccaaaggaaaaggcttagctcaatgagatcggctccctccaaacac 42442  T
Q  637 cctaaacaccttaacaactccaaaaa 662  Q
    | ||||||| |||||||| |||||||    
T  42443 cataaacactttaacaaccccaaaaa 42468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 100; Significance: 4e-49; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 250 - 629
Target Start/End: Complemental strand, 19559 - 19167
Alignment:
Q  250 ccaaagcagagcaacatccaaaaagctcttattcgaaa-gatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagccc 348  Q
    |||||||||||| |||| | |||||||| | | ||||| ||| ||||| | ||||||| ||||||||||||| |||| ||||||||||||||||||||||    
T  19559 ccaaagcagagccacattcgaaaagctcctgtccgaaaagattattcagcttccaccaactctcgacctccgatccaccgaaagaaaccataaaaagccc 19460  T
Q  349 aaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccct 438  Q
    |||||||||||  | ||||||| ||||       |||||||||||||||||| | || |||| ||| || ||||||||||||||||||||| |||||  |    
T  19459 aaaaccaaacttgagccaaagaactgacttccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcaccttt 19360  T
Q  439 ggtacactagagaa-caccaaatcacgccaaagaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagca 536  Q
    |||| || |||||| || ||||| | ||||||  || | |||| || |||||||||||||| ||||||||||||  ||| || |||| ||  ||||||||    
T  19359 ggtataccagagaaacatcaaattaagccaaaacaagaatgcagctagacaccgactcccgatctcgaagcaaaattaaccgacccatcgggaaccagca 19260  T
Q  537 cacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctc 629  Q
     ||||  |||| ||||||||||| ||||  ||||||||||| ||||||||| ||| | ||||||||| | ||||||| |||||| ||| ||||    
T  19259 tacaaacagtaagacaaacgacatgatagatggtggtgcaaacaacaaacatatctaaaggaaaaggctcagctcaatgggaccggctccctc 19167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 235
Target Start/End: Original strand, 11439700 - 11439913
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaaca 119  Q
    |||||| |||| ||||||| ||||  || | ||||||| |||||||||| |||||||||||||||||| |  |||||||||||||| ||||||||| |||    
T  11439700 gtgaaaatgagaatacaaacaaaaggcgacatatatagacggaacatccgaaaataaacaccctaaaatcc-ccctgaagacaacatccaccaaaataca 11439798  T
Q  120 cgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacc 219  Q
    ||||||||||||||||||| | ||||| |||||| ||||| ||||||| ||||||||| || ||  ||||||||||||| | |||||||| |||||||||    
T  11439799 cgtcaccacctaaaacagatcccttcacgaaagcaaccaccgtaaaaatgatatccaacaccacttatcgtcactactccacccccaaag-aaaaacacc 11439897  T
Q  220 cctcaaaatcaaactc 235  Q
    ||||| ||| ||||||    
T  11439898 cctcagaattaaactc 11439913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 493
Target Start/End: Complemental strand, 27102583 - 27102111
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaaca 119  Q
    ||||| ||||| ||||||| ||||   | ||||||||||||||||| || |||||||||||||||||||| ||| ||| |||||||||||||||||  |     
T  27102583 gtgaacctgagaatacaaacaaaaggtgccgtatataggcggaacacccgaaaataaacaccctaaaaac-accatgaggacaacacccaccaaaatcc- 27102486  T
Q  120 cgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacc 219  Q
            |||||||||||    |||| |||| |  |||||||||||| || |||||| || || |||||||||||||||  |||||||||||||| |||    
T  27102485 --------cctaaaacagatactttcacgaaaacagccactgtaaaaacgaaatccaacaccactcatcgtcactactca--ccccaaagaaaaaatacc 27102396  T
Q  220 cctcaaaa-tcaaactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctc 318  Q
    |||||||| || || || || ||||||| | | ||||| |||| ||| | |||  |||| |||  ||||||||||||| | |||||||||||||||||||    
T  27102395 cctcaaaaatccaaatcccattcctgaa-cactaaagctgagccacaacgaaac-gctcctatctgaaagatcattcagcttccaccacctctcgacctc 27102298  T
Q  319 cgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaagagct-------gatctcgaatcaaaagtgattgaccgaccatactatat 409  Q
    || |||| ||||||||||| |||||||||||||||||||||  ||||||||| ||       |||||||||||||||||||| | ||    | ||| |      
T  27102297 cgatccaccgaaagaaaccgtaaaaagcccaaaaccaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccgttagactttga 27102198  T
Q  410 gaccaaatcagaagggca--ccctcacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgact 493  Q
    ||||||| ||||||||||  |||||||||  ||||||| |||| ||||||||||||||||||| || |||||| |  ||||||||||    
T  27102197 gaccaaaacagaagggcaccccctcaccctcggtacaccagagaaacaccaaatcacgccaaataagattgcagccagacaccgact 27102111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 49 - 359
Target Start/End: Complemental strand, 34775244 - 34774937
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaaactaccc-tgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcat 147  Q
    ||||||||||||||||| || |||||||||||| |||||| ||||  ||| ||||||||||||||||| |||||||| ||||||||||||||  |||||     
T  34775244 cgtatataggcggaacacccgaaaataaacaccttaaaaaataccaatgaggacaacacccaccaaaatacacgtcatcacctaaaacagactccttcac 34775145  T
Q  148 gaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaa 247  Q
    |||| |||| |||||||||| || |||| | ||||||| |||||||||||||  |||||| |   |||||||| | ||||  |||||| |||||||  ||    
T  34775144 gaaaacgacaactgtaaaaacgaaatcccacactacccgtcgtcactactca--ccccaatg---aaacacccgtaaaaaataaactcccaatcct-caa 34775051  T
Q  248 ctccaaagcagagcaacatcc-aaaaagctcttattcgaaa-gatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaag 345  Q
    | ||||||| |||| ||||||  |||| ||| |||  ||||  |||| ||| | ||||||||||||| ||||||  | || |||||||||||||||||||    
T  34775050 caccaaagctgagccacatccggaaaaactcctatctgaaacaatcaatcagcttccaccacctctcaacctccaattcaccgaaagaaaccataaaaag 34774951  T
Q  346 cccaaaaccaaact 359  Q
    |||||||| |||||    
T  34774950 cccaaaactaaact 34774937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 131 - 510
Target Start/End: Original strand, 9313097 - 9313466
Alignment:
Q  131 aaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatca 230  Q
    |||||| ||| |||||  ||||| |||| ||| |||| |||||||||||| || ||||||| ||| |||  ||| ||||||||| ||||| ||||||| |    
T  9313097 aaaacataccccttcacaaaagcaaccattgttaaaacgatatccaataccactcatcgtcgctaatcacccccaaaagaaaaa-cacccttcaaaatta 9313195  T
Q  231 aactcacaatcctgaaactccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaa 330  Q
    ||||| || |||||||||  |||||| |||| |||||| |||| ||| |||| ||| |||||| ||||  ||||||||| || ||||||| |||| ||||    
T  9313196 aactcccagtcctgaaac--caaagctgagccacatccgaaaaactcgtatttgaaggatcatacaactgccaccacctatccacctccgatccaccgaa 9313293  T
Q  331 agaaaccataaaaagcccaaaaccaaactatccaaagagctgatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-cc 429  Q
    ||||||||||||||||| || | |  |||          | ||||||||||||||||||||   || || | ||| || |||||||||||||||||| ||    
T  9313294 agaaaccataaaaagccaaagaactgact---------cccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcaccc 9313384  T
Q  430 ctcacccctggtacactagag-aacaccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaa 510  Q
    ||||| || | ||||| |||| |||||||||||||| |||| ||||||||| || |||||| ||||||| ||||||||||||    
T  9313385 ctcacgcccgatacacgagagaaacaccaaatcacggcaaacaaaattgcagctagacaccaactcccgatctcgaagcaaa 9313466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 59 - 356
Target Start/End: Original strand, 31290740 - 31291031
Alignment:
Q  59 cggaacatccaaaaataaacaccctaaaaactaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcatgaaagcgacca 158  Q
    ||||||| || |||||||||||| |||||||  |||||| |||||  |||  || | | ||| |||||||||||| |||||  ||||  |||| ||||||    
T  31290740 cggaacacccgaaaataaacaccataaaaacacccctgaggacaattcccttcatata-cacatcaccacctaaatcagactccttcgcgaaaacgacca 31290838  T
Q  159 ctgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccctcaaaatcaaactcacaatcctgaaactccaaagcag 258  Q
    ||||||||| |||| ||||  | | ||||||||||||||||  || |||||||||| ||||||| ||||  ||||     |||  ||| | ||||||| |    
T  31290839 ctgtaaaaatgatagccaa--ccatccatcgtcactactcac-cctcaaagaaaaa-cacccctaaaaaataaacggctcatctagaa-caccaaagctg 31290933  T
Q  259 agcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaa 356  Q
    ||| |||||| |||||||| ||| ||||||||||  |||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  31290934 agccacatccgaaaagctcctatccgaaagatcaagcaacttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaa 31291031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 250 - 585
Target Start/End: Complemental strand, 16147733 - 16147384
Alignment:
Q  250 ccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaa--ccataaaaa-gc 346  Q
    ||||||| |||| |||||| |||||||| |||  ||||||||||||||| | ||||||||||| ||||||| || | |||||||||  ||||||||| |     
T  16147733 ccaaagctgagccacatccgaaaagctcatatctgaaagatcattcaactttcaccacctctccacctccgatctaccgaaagaaataccataaaaaagt 16147634  T
Q  347 ccaaaaccaaact--atccaaagagctga-------tctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcacc-ctcaccc 436  Q
    |||||| ||||||  | ||||||| ||||       | | ||||||||| | || | || ||||||||  | ||||||| |||||||| ||| |||||||    
T  16147633 ccaaaatcaaacttgacccaaagaactgactcccgatattgaatcaaaattcatcgtcccaccatacttaacgaccaaaacagaagggaacctctcaccc 16147534  T
Q  437 ctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagc 535  Q
    | ||||| |||||||| |||||||||| |||||| || |||||| || ||||  |||||||| |||||||  ||| ||||||| ||||||| || | | |    
T  16147533 ccggtacgctagagaaacaccaaatcaagccaaacaagattgcagctagacagtgactcccgatctcgaactaaaagtaatcggcccaccggaacctaac 16147434  T
Q  536 acacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaa 585  Q
    |||||| ||||| |||||| |||| |||| | |||||||||| |||||||    
T  16147433 acacaataagtaagacaaatgacatgatatgcggtggtgcaaacaacaaa 16147384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 490 - 662
Target Start/End: Original strand, 10785489 - 10785656
Alignment:
Q  490 gactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaacaaacaaa 589  Q
    |||||||| ||||||||||||  ||| || ||||||| ||||||||||||||  |||| ||||||| |||||||| | || ||||||| |||| | ||||    
T  10785489 gactcccgatctcgaagcaaaattaaccggcccaccggaaaccagcacacaaacagtaagacaaaccacaagataggcgggggtgcaaacaacgatcaaa 10785588  T
Q  590 tcaataggaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaactccaaaaa 662  Q
         ||||||||| | ||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||||    
T  10785589 -----aggaaaaggctcagctcaatgggacctgctccctccaaacaccctaaacaccttaacaaccccaaaaa 10785656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 23 - 359
Target Start/End: Original strand, 10785144 - 10785474
Alignment:
Q  23 aaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccct-gaagacaacacccaccaaaaaacacg 121  Q
    |||||||| |||||||  ||||||| |||| | || ||||||| ||||| ||||||||| ||||||  ||||| || ||||||||||| ||||| ||| |    
T  10785144 aaactgagaatacaaactaaaaacgccgtacaaagtcggaacacccaaatataaacaccttaaaaaacacccttgaggacaacacccatcaaaatacatg 10785243  T
Q  122 tcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaacacccc 221  Q
    | | ||| ||||||||||  ||||| |||| ||||  ||| ||||| ||||||||  || ||||||||||||||||||  || |    || |||||||||    
T  10785244 ttatcacttaaaacagactccttcacgaaaacgacatctgaaaaaacgatatcca--accacccatcgtcactactcatcccgc----aagaaacacccc 10785337  T
Q  222 tcaaaatcaaactcacaatcct-gaaactccaaagcagagcaacatccaaaaagctcttattcga-aagatcattcaacatccaccacctctcgacctcc 319  Q
    ||||||  |||||| || |||| || |  ||||||||||||  || || |||||||| |||  || || |||||||| | ||||||||||| ||||||||    
T  10785338 tcaaaaataaactctcagtcctcgata--ccaaagcagagccgcacccgaaaagctcctatcagagaaaatcattcagcttccaccacctcgcgacctcc 10785435  T
Q  320 gttccatcgaaagaaaccataaaaagcccaaaaccaaact 359  Q
    |  ||| ||||| ||| |||||||||||||||||||||||    
T  10785436 gaaccaccgaaa-aaatcataaaaagcccaaaaccaaact 10785474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 49 - 199
Target Start/End: Complemental strand, 32882739 - 32882588
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaa-actaccctgaagacaacacccaccaaaaaacacgtcaccacctaaaacagacctcttcat 147  Q
    ||||||||||| ||||| || |||||||||||||||||| ||  ||| || ||||||||||||||||| | || ||||| |||||||| |||  |||||     
T  32882739 cgtatataggcagaacacccgaaaataaacaccctaaaagacacccccgaggacaacacccaccaaaatatacatcaccgcctaaaactgactccttcac 32882640  T
Q  148 gaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactca 199  Q
    |||| ||| ||||||||| | ||||||||| || ||||||||||||||||||    
T  32882639 gaaaacgagcactgtaaacacgatatccaacaccacccatcgtcactactca 32882588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 20 - 246
Target Start/End: Complemental strand, 46768578 - 46768360
Alignment:
Q  20 gtgaaactgagcatacaaagaaaaaacgtc-gtatataggcggaacatccaaaaataaacaccctaaaaactaccct-gaagacaacacccaccaaaaaa 117  Q
    |||||| |||||||||||| ||||  || | |||| ||||||||||| || |||||||||||||||||||  ||||  || |||||||||||||||||      
T  46768578 gtgaaattgagcatacaaacaaaaggcgcccgtatgtaggcggaacacccgaaaataaacaccctaaaaaacacccccgaggacaacacccaccaaaatt 46768479  T
Q  118 cacgtcaccacctaaaacagacctcttcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactcaagccccaaagaaaaaaca 217  Q
    ||||||||||||||||||||||  ||||| |||| |||||||         ||||||||| ||| |||||||||||||||| | |||||||||||||| |    
T  46768478 cacgtcaccacctaaaacagactccttcacgaaaacgaccac--------cgatatccaacactgcccatcgtcactactc-acccccaaagaaaaaa-a 46768389  T
Q  218 cccctcaaaatcaaactcacaatcctgaa 246  Q
     ||||||| |  |||||| ||||||||||    
T  46768388 accctcaagactaaactcccaatcctgaa 46768360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 7857697 - 7857527
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc-tcacccctggtacactagagaacaccaaatcacgccaaag 470  Q
    |||||||||||||||||||| | || |||| ||| ||  |||||||||| ||||||||| || ||||  |||||| |||||||| || |||| | ||||     
T  7857697 gatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccctcgcccccagtacaccagagaacaacatatcaagtcaaac 7857598  T
Q  471 aaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
    | |||||||||| |||||| ||||||| ||||||||||||  |||||| ||||| | ||||||||||||||    
T  7857597 ataattgcaactagacaccaactcccgatctcgaagcaaaaataatcggcccactggaaaccagcacacaa 7857527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 475 - 654
Target Start/End: Original strand, 6583333 - 6583511
Alignment:
Q  475 ttgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtg 574  Q
    ||||| || |||||||||||||| |||||||||||| |||| || |||||||| ||||| ||||||| ||||| ||| ||||||  |||| | |||||||    
T  6583333 ttgcagctagacaccgactcccgatctcgaagcaaaagtaaccggcccaccgacaaccaacacacaaaaagtatgac-aacgacgtgatatgcggtggtg 6583431  T
Q  575 caagcaacaaacaaatcaataggaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaac 654  Q
    ||| ||||||||  ||||| || ||||   | | | ||||| ||||| || ||| |||||||||||||||||||||||||    
T  6583432 caaacaacaaactgatcaaaagaaaaaaactcaacacaacgagacccacttccttcaaacaccctaaacaccttaacaac 6583511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 484 - 619
Target Start/End: Complemental strand, 52278428 - 52278293
Alignment:
Q  484 gacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtggtggtgcaagcaaca 583  Q
    ||||||| |||| |||||||||||||| |||||||  ||||||||||||| ||| ||| ||| | ||||||||||| |||||| ||||||| || |||||    
T  52278428 gacaccggctcctggtctcgaagcaaaagtaatcggtccaccgaaaaccaacacgcaataagcaagacaaacgacatgataagcggtggtgaaaacaaca 52278329  T
Q  584 aacaaatcaataggaaaaggtttagctcaacgggac 619  Q
    |||||||||| | ||| ||| | | |||||||||||    
T  52278328 aacaaatcaaaatgaataggctcatctcaacgggac 52278293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 49 - 199
Target Start/End: Complemental strand, 16149148 - 16148997
Alignment:
Q  49 cgtatataggcggaacatccaaaaataaacaccctaaaa-actaccctgaagacaaca-cccaccaaaaaacacgtcaccacctaaaacagacctcttca 146  Q
    |||||||||||||||||  | |||||||||||||||||| || ||| ||| ||||| | ||| | |||| |||||||||||||||||||||||  |||||    
T  16149148 cgtatataggcggaacacgcgaaaataaacaccctaaaagacaaccttgaggacaaaagcccgctaaaatacacgtcaccacctaaaacagacaccttca 16149049  T
Q  147 tgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactactca 199  Q
    || || |||| |||| ||||| ||||||||| |  ||||||||||||||||||    
T  16149048 tgtaaacgactactg-aaaaacgatatccaaaagcacccatcgtcactactca 16148997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 250 - 430
Target Start/End: Original strand, 6583122 - 6583311
Alignment:
Q  250 ccaaagcagagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagccca 349  Q
    ||||||| ||||  ||||| |||||||| |||  ||||||||| ||| | ||||||||||||||||||||| | || ||||||||||||||||||||  |    
T  6583122 ccaaagctgagccgcatccgaaaagctcctatctgaaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaaaccataaaaagcaaa 6583221  T
Q  350 aaacc-aaact-atccaaaga-------gctgatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccc 430  Q
    ||||| ||||| |||||||||       || |||||||||||||||||||| |  | |||| ||| || ||||||||||||| |||||||    
T  6583222 aaaccaaaactgatccaaagaattgactgccgatctcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcaccc 6583311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 372 - 559
Target Start/End: Original strand, 46692856 - 46693046
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcacc-ctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    |||||||||||||||||||| | || |||| ||||||| ||||||| || |||||||| ||| |||| ||||||| |||| || | ||||||| | ||||    
T  46692856 gatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacctctcgcccccggtacaccagagaaaaatcaaatcaagtcaaa 46692955  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgaca 559  Q
     ||| ||||||||| |||  ||||||||| ||||||||| ||   ||||| |||||||||||| ||||||||| | ||| |||||| ||||    
T  46692956 caaagattgcaactagacctcgactcccgatctcgaagccaaatgaatcggcccaccgaaaactagcacacaatatgtaagacaaaagaca 46693046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 24658973 - 24658803
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagagaacaccaaatcacgccaaag 470  Q
    |||||||||||||||||||||| || |||| ||| ||  |||||||||| |||||| ||||  |||| | ||||| ||||||||||| |||| | ||||     
T  24658973 gatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcaccccttgcccccgatacaccagagaacaccatatcaagtcaaac 24658874  T
Q  471 aaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
    |  |||||| || |||||| ||||||| ||| ||||||||  ||| || ||||||| |  |||||||||||    
T  24658873 atgattgcagctagacaccaactcccgatcttgaagcaaaaataaccggcccaccggactccagcacacaa 24658803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 372 - 577
Target Start/End: Complemental strand, 17033630 - 17033423
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccctcacccct-ggtacactagagaa-caccaaa-tcacgccaa 468  Q
    |||||||| ||||||||||| | || |||| |||||| ||||||||||||||||||||| |  | || ||| ||| | |||| ||||  | ||| |||||    
T  17033630 gatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcaccccctactctcggttcaccatagaatcaccgtagtca-gccaa 17033532  T
Q  469 agaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtg 568  Q
    | || ||||||||| ||| || | || || ||||||| |||| |||| || ||||||  || ||||||||||| ||||| |||||||||||||||  |||    
T  17033531 acaagattgcaactagacgccaattctcgatctcgaaacaaaagtaaccggcccaccagaatccagcacacaataagtaagacaaacgacaagatttgtg 17033432  T
Q  569 gtggtgcaa 577  Q
    |||||||||    
T  17033431 gtggtgcaa 17033423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 285 - 589
Target Start/End: Original strand, 32864502 - 32864819
Alignment:
Q  285 aaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaaaccataaaaagcccaaaaccaaact--atccaaaga-------gctgatc 375  Q
    ||||||||  || ||||||||||||| ||||||| | ||||   |||||||||||||||||||||||||||||||  |  ||||||        | ||||    
T  32864502 aaagatcaaacatcatccaccacctcccgacctctgatccacaaaaagaaaccataaaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatc 32864601  T
Q  376 tcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactaga-gaacaccaaatcacgcc-aaagaa 472  Q
    |||||| ||||||||||| || ||||  || || ||||||||| |||||||| |||||||||   ||| |  |||  |||||||||| | ||| ||| ||    
T  32864602 tcgaattaaaagtgattggcccaccagcctttaggaccaaatcggaagggcacccctcaccctcagtagatcagataaacaccaaataaagccaaaacaa 32864701  T
Q  473 aattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccacc-gaaaaccagcacacaacaagtaggacaaacgacaagataagtggtg 571  Q
     |||| | || |||||||||||| | | |||||||||| |||| || |||||| |||||| ||||||||| | ||| |||||| |||| ||||||  | |    
T  32864702 gattgtagctagacaccgactcctgatttcgaagcaaaagtaaccggcccaccggaaaactagcacacaaaacgtatgacaaaagacatgataagcagag 32864801  T
Q  572 gtgcaagcaacaaacaaa 589  Q
    |||||| |||||| ||||    
T  32864802 gtgcaaacaacaatcaaa 32864819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 139
Target Start/End: Original strand, 6582968 - 6583051
Alignment:
Q  57 ggcggaacatccaaaaataaacaccctaaaaactaccc-tgaagacaacacccaccaaaaaacacgtcaccacctaaaacagac 139  Q
    ||||||||| || |||||||||||| ||||||  || | ||| || |||||||||||||| |||||||||||||||||||||||    
T  6582968 ggcggaacacccgaaaataaacaccataaaaaacactcatgatgataacacccaccaaaatacacgtcaccacctaaaacagac 6583051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 9313011 - 9313098
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaaactaccctgaa 98  Q
    |||||||| |||||||| |  ||||||  ||||  |||||||||||||||||||| || ||||||||||||||||||||  |||||||    
T  9313011 cagagaccggtgaaacttataatacaatcaaaaggcgtcgtatataggcggaacacccgaaaataaacaccctaaaaacacccctgaa 9313098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 372 - 510
Target Start/End: Original strand, 46814504 - 46814643
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagagaacaccaaatcacgccaaag 470  Q
    |||||||||||||||||||| | || |||| ||| ||  |||||||||| |||||| ||||  |||| ||||||| ||||||||||| |||| | ||||     
T  46814504 gatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcaccccttgcccccggtacaccagagaacaccatatcaagtcaaac 46814603  T
Q  471 aaaattgcaactggacaccgactcccggtctcgaagcaaa 510  Q
    |  ||||||||| |||||| |||| || ||||||| ||||    
T  46814604 aggattgcaactagacaccaactctcgatctcgaatcaaa 46814643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 46603750 - 46603623
Alignment:
Q  32 atacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaa-caccctaaaa-actaccctgaagacaacacccaccaaaaaacacgtcaccacc 129  Q
    ||||||| |||| |||| |||||||||||||||| || |||||||| || | ||||| ||  |||||||||||||||||||||||| | |  |||||| |    
T  46603750 atacaaacaaaagacgttgtatataggcggaacacccgaaaataaaacatcataaaagac--ccctgaagacaacacccaccaaaata-aaatcaccatc 46603654  T
Q  130 taaaacagacctcttcatgaaagcgaccactg 161  Q
    |||||||||| |||||| |||| |||||||||    
T  46603653 taaaacagacttcttcacgaaa-cgaccactg 46603623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 410 - 515
Target Start/End: Complemental strand, 34774877 - 34774771
Alignment:
Q  410 gaccaaatcagaagggcacc-ctcacccctggtacactagagaa-caccaaatcacgccaaagaaaattgcaactggacaccgactcccggtctcgaagc 507  Q
    |||||||||||||||||||| |||||||| | || ||||||||| || ||||||| |||||| || |||| |  | |||||||||||||| |||||||||    
T  34774877 gaccaaatcagaagggcaccactcacccccg-tatactagagaaacatcaaatcaagccaaacaagattgtagttagacaccgactcccgttctcgaagc 34774779  T
Q  508 aaacgtaa 515  Q
    ||| ||||    
T  34774778 aaaagtaa 34774771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 372 - 577
Target Start/End: Original strand, 38544775 - 38544981
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccctcacccctggtacactagagaa-caccaaa-tcacgccaaa 469  Q
    |||||||||||||||| ||| | || |||| |||  ||||||||||||||||||  ||||||  ||  || ||| |||||| ||||||| |||  | |||    
T  38544775 gatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaagggacccctcattcccagtccaccagagaaacaccaaaatcaatc-aaa 38544873  T
Q  470 gaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtgg 569  Q
     || |||||| || |||||| ||||||  |||||||||||| ||||||| |||||   || ||||||||||| | ||| ||||||||||| |||  | ||    
T  38544874 caagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagacaaacgacatgatttgcgg 38544973  T
Q  570 tggtgcaa 577  Q
    ||||||||    
T  38544974 tggtgcaa 38544981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 372 - 507
Target Start/End: Original strand, 31585797 - 31585935
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    |||||||||||||||||||| | || |||| ||||||  ||||||| || |||||| |||||||||   |||||| |||| || ||||||||| | ||||    
T  31585797 gatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccctcaccctcagtacaccagagaaaaaccaaatcaagtcaaa 31585896  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagc 507  Q
     ||| |||||| || ||| |||||||||| |||||||||    
T  31585897 caaagattgcagctagaccccgactcccgatctcgaagc 31585935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 16577428 - 16577367
Alignment:
Q  258 gagcaacatccaaaaagctcttattcgaaagatcattcaacatccaccacctctcgacctcc 319  Q
    |||| |||||| |||||||| ||||| |||||||||||| | ||||||||||||| ||||||    
T  16577428 gagccacatccgaaaagctcctattccaaagatcattcagcttccaccacctctcaacctcc 16577367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 9557317 - 9557241
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaacaccctaaaa 87  Q
    |||||||| ||||| ||||| ||||||| ||||||| |||||||||  || |||| || |||||||||||| |||||    
T  9557317 cagagaccggtgaatctgagaatacaaataaaaaacatcgtatataaacgaaacacccgaaaataaacaccttaaaa 9557241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 654
Target Start/End: Complemental strand, 27102096 - 27102060
Alignment:
Q  618 acccgctacctccaaacaccctaaacaccttaacaac 654  Q
    ||||||| |||||||||||||||||||||||||||||    
T  27102096 acccgcttcctccaaacaccctaaacaccttaacaac 27102060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 372 - 541
Target Start/End: Complemental strand, 41920496 - 41920325
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    |||||||||||||||||||| | || |||| ||| ||  ||||||| || |||||| ||||| ||||  |||||| |||| || ||||||||| | ||||    
T  41920496 gatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccctcgcccc-agtacaccagagaaaaaccaaatcaagtcaaa 41920398  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaa 541  Q
     ||| |||||| || ||| |||||||||| ||||||||| ||   || || |||||||||||| |||||||||    
T  41920397 caaagattgcagctagaccccgactcccgatctcgaagccaaatgaaccggcccaccgaaaactagcacacaa 41920325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 78
Target Start/End: Complemental strand, 37200552 - 37200485
Alignment:
Q  11 cagagaccagtgaaactgagcatacaaagaaaaaacgtcgtatataggcggaacatccaaaaataaac 78  Q
    |||||||| |||| || ||| |||||||  ||| || ||||||||||||||||||||| |||||||||    
T  37200552 cagagaccggtgataccgagaatacaaactaaagacatcgtatataggcggaacatccgaaaataaac 37200485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 359
Target Start/End: Complemental strand, 19598783 - 19598702
Alignment:
Q  278 ttattcgaaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaact 359  Q
    |||||| |||||||| ||||| ||||||||||| | |||||||  ||| |||||||| |||||||||| ||||||| ||||||    
T  19598783 ttattctaaagatcaatcaacttccaccacctcacaacctccggaccaccgaaagaacaccataaaaa-cccaaaatcaaact 19598702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 611 - 660
Target Start/End: Complemental strand, 7857454 - 7857405
Alignment:
Q  611 caacgggacccgctacctccaaacaccctaaacaccttaacaactccaaa 660  Q
    ||||||||| | || ||||||||||||||||||||||| ||||| |||||    
T  7857454 caacgggacacactccctccaaacaccctaaacaccttgacaaccccaaa 7857405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 538
Target Start/End: Original strand, 24449967 - 24450136
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggca-ccctcacccctggtacactagag-aacaccaaatcacgccaaa 469  Q
    |||||| ||||||||||||| | || |||| ||||||  ||||||  || |||||| ||||| |||| ||||||| |||| || |||||| || | ||||    
T  24449967 gatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccctcgcccccggtacaccagagaaaaaccaaaccaagtcaaa 24450066  T
Q  470 gaaa-attgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcaca 538  Q
     ||| |||||| || ||| |||||||||| ||||||||| ||   ||||| |||| ||||||||| ||||    
T  24450067 caaagattgcagctagaccccgactcccgatctcgaagccaaatgaatcggcccatcgaaaaccaacaca 24450136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 38546890 - 38546931
Alignment:
Q  47 gtcgtatataggcggaacatccaaaaataaacaccctaaaaa 88  Q
    |||||||||||||||||||||| |||||||| ||| ||||||    
T  38546890 gtcgtatataggcggaacatccgaaaataaaaaccataaaaa 38546931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 285 - 360
Target Start/End: Complemental strand, 4651919 - 4651844
Alignment:
Q  285 aaagatcattcaacatccaccacctctcgacctccgttccatcgaaagaa-accataaaaagcccaaaaccaaacta 360  Q
    |||||||||||| | ||||||||| | | ||||||| |||| |||| ||| |||| |||||||||||||||||||||    
T  4651919 aaagatcattcagcttccaccaccgcgcaacctccggtccaccgaaggaacacca-aaaaagcccaaaaccaaacta 4651844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 595 - 663
Target Start/End: Original strand, 9313487 - 9313555
Alignment:
Q  595 aggaaaaggtttagctcaacgggacccgctacctccaaacaccctaaacaccttaacaactccaaaaaa 663  Q
    ||||||||| | |||| ||||||||  ||| |||||||||||| ||||||||||| |||| || |||||    
T  9313487 aggaaaaggctcagcttaacgggactagcttcctccaaacaccataaacaccttagcaacccccaaaaa 9313555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1384 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1384
Description:

Target: scaffold1384; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 197
Target Start/End: Original strand, 1360 - 1513
Alignment:
Q  49 cgtatataggcggaacatcc-aaaaataaacaccctaaaaactaccctgaag----acaacacccaccaaaaaacacgtcaccacctaaaacagacctct 143  Q
    ||||||||||| ||||| || ||||||||||||| ||||||  ||||  |||    |||| |||||| |||| ||||||||||||||||||| |||  ||    
T  1360 cgtatataggcagaacacccgaaaaataaacaccataaaaaacacccctaaggacaacaaaacccacaaaaatacacgtcaccacctaaaactgactcct 1459  T
Q  144 tcatgaaagcgaccactgtaaaaaagatatccaatactacccatcgtcactact 197  Q
     || || | | ||||||||||||| ||||||||| || || | |||||||||||    
T  1460 acacgagaacaaccactgtaaaaacgatatccaacaccacacgtcgtcactact 1513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 372 - 577
Target Start/End: Original strand, 1054 - 1260
Alignment:
Q  372 gatctcgaatcaaaagtgattgaccgaccatactatatgaccaaatcagaagggcaccctcacccctggtacactagagaa-caccaaa-tcacgccaaa 469  Q
    |||||||||||||||| ||| | || |||| |||  ||||||||||||||||||  ||||||  ||  || ||| |||||| ||||||| |||  | |||    
T  1054 gatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaagggacccctcattcccagtccaccagagaaacaccaaaatcaatc-aaa 1152  T
Q  470 gaaaattgcaactggacaccgactcccggtctcgaagcaaacgtaatcgccccaccgaaaaccagcacacaacaagtaggacaaacgacaagataagtgg 569  Q
     || |||||| || |||||| ||||||  |||||||||||| ||||||| |||||   || ||||||||||| | ||| ||||||||||| |||  | ||    
T  1153 caagattgcagctagacaccaactcccaatctcgaagcaaaagtaatcggcccactagaatccagcacacaatatgtaagacaaacgacatgatttgcgg 1252  T
Q  570 tggtgcaa 577  Q
    ||||||||    
T  1253 tggtgcaa 1260  T

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