View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11395_high_24 (Length: 242)
Name: NF11395_high_24
Description: NF11395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11395_high_24 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 9680304 - 9680063
Alignment:
| Q |
1 |
tgcaaacttctaagaccaccaatgccaaatggaatttgaccataaaatctattagaagaaagtttcaatatctctaaattgttcaattcaccaatccaat |
100 |
Q |
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| T |
9680304 |
tgcaaacttctaagaccaccaatgccaaatggaatttgaccataaaatctattagaagaaagtttcaatatctctaaattgttcaattcaccaatccaat |
9680205 |
T |
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| Q |
101 |
gtggaatgctcccattgaaataattcccttgcaaacttagtaatgtgcatgaggcgagtctttgtatcgactctggaattatatcagtaagaagattatc |
200 |
Q |
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| T |
9680204 |
gtggaatgctcccattgaaataattcccttgcaaacttagtaatgtgcatgaggcgagtctttgtatcgactctggaattacatcagtaagaagattatc |
9680105 |
T |
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| Q |
201 |
actgaaatcaatcaacttcaaaagcaaacagtttcctatgct |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
9680104 |
actgaaatcaatcaacttcaaaagcaaacagtttcctatgct |
9680063 |
T |
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