View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11395_low_19 (Length: 257)
Name: NF11395_low_19
Description: NF11395
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11395_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 36781691 - 36781545
Alignment:
| Q |
20 |
tacctgacattagatcaaagagcataattgtggagtcttaaagaatagaatggcaaattaggtcttgatcaagcatacaaagccaaaagaaaataagttg |
119 |
Q |
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| T |
36781691 |
tacctgacatgagatcaaagagcataattgtggagtcttaaagaatagaatggcaaattaggttttgatcaagcatacaaagccaaaagaaaataagttg |
36781592 |
T |
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| Q |
120 |
aaatcatacaaaacgtgaataatttatttaaattgtcacgtcatcaa |
166 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
36781591 |
aaatgatacaaaacgtgaataatttatttaaattgtcacgtcatcaa |
36781545 |
T |
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