View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11396_high_17 (Length: 354)

Name: NF11396_high_17
Description: NF11396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11396_high_17
NF11396_high_17
[»] chr5 (37 HSPs)
chr5 (97-336)||(36205873-36206111)
chr5 (3-88)||(18864428-18864513)
chr5 (3-88)||(12189308-12189393)
chr5 (3-87)||(40738891-40738975)
chr5 (2-89)||(36294178-36294265)
chr5 (3-90)||(4621143-4621229)
chr5 (3-89)||(10666139-10666225)
chr5 (3-86)||(31498837-31498920)
chr5 (3-85)||(6245188-6245270)
chr5 (3-85)||(37105851-37105933)
chr5 (3-82)||(7338624-7338703)
chr5 (3-86)||(31484649-31484732)
chr5 (3-86)||(43548585-43548668)
chr5 (3-85)||(15272771-15272853)
chr5 (3-87)||(8232542-8232626)
chr5 (3-83)||(37274617-37274697)
chr5 (3-86)||(41881922-41882005)
chr5 (3-86)||(42437377-42437460)
chr5 (3-83)||(18978453-18978533)
chr5 (3-90)||(18522158-18522244)
chr5 (3-90)||(37340796-37340883)
chr5 (11-87)||(6469944-6470020)
chr5 (3-63)||(31527580-31527640)
chr5 (3-72)||(13210991-13211060)
chr5 (3-63)||(4156171-4156231)
chr5 (3-63)||(9065721-9065781)
chr5 (3-63)||(13145883-13145943)
chr5 (11-63)||(25084879-25084931)
chr5 (11-63)||(25142852-25142904)
chr5 (3-85)||(10552506-10552588)
chr5 (3-88)||(19034723-19034808)
chr5 (3-44)||(24559110-24559151)
chr5 (3-44)||(24600142-24600183)
chr5 (3-44)||(33280851-33280892)
chr5 (3-44)||(37865917-37865958)
chr5 (15-63)||(38760537-38760585)
chr5 (3-63)||(43518294-43518354)
[»] chr1 (50 HSPs)
chr1 (1-88)||(7009006-7009093)
chr1 (1-92)||(24527635-24527726)
chr1 (3-86)||(29922226-29922309)
chr1 (3-90)||(40498613-40498700)
chr1 (3-87)||(51776028-51776112)
chr1 (3-88)||(17605725-17605810)
chr1 (3-88)||(51002033-51002118)
chr1 (3-89)||(9640893-9640979)
chr1 (3-89)||(26307843-26307929)
chr1 (2-88)||(32086480-32086566)
chr1 (1-86)||(13146022-13146107)
chr1 (3-83)||(41712763-41712843)
chr1 (15-90)||(32561260-32561335)
chr1 (3-86)||(35273826-35273909)
chr1 (3-85)||(17474665-17474747)
chr1 (1-82)||(23444343-23444424)
chr1 (3-87)||(8114906-8114990)
chr1 (3-91)||(12601849-12601936)
chr1 (3-83)||(19247779-19247859)
chr1 (3-89)||(3485812-3485899)
chr1 (3-86)||(6016615-6016698)
chr1 (3-85)||(19514138-19514220)
chr1 (3-64)||(14290295-14290356)
chr1 (15-92)||(48933209-48933286)
chr1 (3-63)||(20581522-20581582)
chr1 (3-62)||(5672915-5672974)
chr1 (3-86)||(18909215-18909298)
chr1 (3-89)||(33010787-33010873)
chr1 (3-88)||(42948187-42948272)
chr1 (3-63)||(2482633-2482693)
chr1 (11-63)||(11173509-11173561)
chr1 (3-87)||(13942142-13942226)
chr1 (13-89)||(14247456-14247532)
chr1 (3-63)||(24317204-24317264)
chr1 (3-63)||(28852920-28852980)
chr1 (3-63)||(39569456-39569516)
chr1 (11-63)||(39982286-39982338)
chr1 (3-63)||(40400056-40400116)
chr1 (11-63)||(51290572-51290624)
chr1 (8-63)||(13240225-13240280)
chr1 (3-86)||(46291824-46291907)
chr1 (14-63)||(6653247-6653296)
chr1 (3-88)||(15932784-15932869)
chr1 (101-134)||(16708871-16708904)
chr1 (11-44)||(40536797-40536830)
chr1 (3-63)||(34270774-34270834)
chr1 (3-63)||(44721894-44721954)
chr1 (3-63)||(50727820-50727880)
chr1 (3-63)||(52024748-52024808)
chr1 (3-63)||(52044390-52044450)
[»] chr4 (56 HSPs)
chr4 (1-83)||(8713227-8713309)
chr4 (1-86)||(22301757-22301842)
chr4 (1-86)||(37683274-37683359)
chr4 (3-90)||(24896981-24897068)
chr4 (1-84)||(32135358-32135441)
chr4 (3-92)||(41202360-41202449)
chr4 (3-87)||(40430121-40430205)
chr4 (3-87)||(48349499-48349583)
chr4 (3-86)||(35339659-35339742)
chr4 (3-77)||(49340-49414)
chr4 (1-87)||(50561563-50561649)
chr4 (3-92)||(22847098-22847187)
chr4 (3-87)||(43458406-43458490)
chr4 (3-86)||(24034518-24034601)
chr4 (3-88)||(1522781-1522866)
chr4 (3-88)||(48990343-48990428)
chr4 (3-86)||(28803983-28804066)
chr4 (3-86)||(47467422-47467505)
chr4 (3-88)||(11682206-11682291)
chr4 (3-88)||(11690485-11690570)
chr4 (1-86)||(13962490-13962575)
chr4 (3-86)||(3026381-3026464)
chr4 (3-89)||(32932581-32932667)
chr4 (3-86)||(43621589-43621672)
chr4 (3-85)||(30217138-30217220)
chr4 (3-85)||(34159011-34159093)
chr4 (8-86)||(50602048-50602126)
chr4 (3-92)||(19874137-19874226)
chr4 (3-87)||(50469062-50469146)
chr4 (3-87)||(51322649-51322732)
chr4 (3-86)||(51322404-51322487)
chr4 (98-152)||(2702679-2702732)
chr4 (3-89)||(37828750-37828835)
chr4 (3-88)||(39540416-39540501)
chr4 (3-88)||(47429844-47429929)
chr4 (3-88)||(52913208-52913293)
chr4 (8-89)||(53036035-53036116)
chr4 (3-88)||(53875125-53875210)
chr4 (3-63)||(613846-613906)
chr4 (3-63)||(10542047-10542107)
chr4 (3-63)||(20434185-20434245)
chr4 (11-63)||(20737713-20737765)
chr4 (3-91)||(42348655-42348743)
chr4 (3-63)||(42724196-42724256)
chr4 (3-63)||(52839747-52839807)
chr4 (3-63)||(55219890-55219950)
chr4 (11-63)||(56018716-56018768)
chr4 (3-63)||(56362841-56362901)
chr4 (3-90)||(55215608-55215695)
chr4 (98-168)||(22397253-22397322)
chr4 (11-92)||(3019676-3019757)
chr4 (3-44)||(43830232-43830273)
chr4 (9-53)||(7817806-7817850)
chr4 (3-87)||(20293310-20293394)
chr4 (3-63)||(28406453-28406513)
chr4 (3-63)||(38291870-38291930)
[»] chr3 (52 HSPs)
chr3 (3-87)||(36232685-36232769)
chr3 (3-91)||(36885754-36885842)
chr3 (3-88)||(38145254-38145339)
chr3 (3-87)||(33392510-33392594)
chr3 (3-86)||(35039572-35039655)
chr3 (3-87)||(44354512-44354596)
chr3 (3-86)||(7681017-7681100)
chr3 (3-85)||(48584835-48584917)
chr3 (3-86)||(11123858-11123941)
chr3 (3-85)||(51662176-51662258)
chr3 (3-88)||(2613340-2613425)
chr3 (3-92)||(30418684-30418773)
chr3 (3-87)||(19941681-19941765)
chr3 (1-85)||(41588879-41588962)
chr3 (1-87)||(4596437-4596523)
chr3 (3-93)||(52812121-52812210)
chr3 (3-80)||(14279112-14279189)
chr3 (11-88)||(20657409-20657486)
chr3 (3-72)||(35233678-35233747)
chr3 (3-100)||(38871106-38871203)
chr3 (11-63)||(7679719-7679771)
chr3 (3-86)||(47098317-47098400)
chr3 (3-83)||(49779868-49779947)
chr3 (3-90)||(4516028-4516115)
chr3 (3-86)||(36841119-36841202)
chr3 (2-53)||(39627134-39627185)
chr3 (3-85)||(1774036-1774118)
chr3 (3-85)||(52343083-52343165)
chr3 (11-63)||(84411-84463)
chr3 (11-63)||(672090-672142)
chr3 (3-63)||(10841446-10841506)
chr3 (3-63)||(10999760-10999820)
chr3 (3-86)||(11095647-11095730)
chr3 (3-63)||(20048357-20048417)
chr3 (3-63)||(20835596-20835656)
chr3 (11-63)||(24395118-24395170)
chr3 (3-63)||(25710909-25710969)
chr3 (11-63)||(32236155-32236207)
chr3 (3-63)||(33712637-33712697)
chr3 (3-63)||(40586185-40586245)
chr3 (11-89)||(26090198-26090276)
chr3 (3-89)||(33966892-33966978)
chr3 (30-83)||(8947901-8947954)
chr3 (3-44)||(22781921-22781962)
chr3 (3-88)||(35155774-35155859)
chr3 (3-44)||(41069877-41069918)
chr3 (3-44)||(54556389-54556430)
chr3 (3-63)||(4044822-4044882)
chr3 (8-56)||(18168502-18168550)
chr3 (98-134)||(20174921-20174957)
chr3 (3-63)||(37971688-37971748)
chr3 (3-63)||(53974333-53974393)
[»] chr6 (21 HSPs)
chr6 (8-91)||(31091151-31091234)
chr6 (3-90)||(6925773-6925860)
chr6 (3-89)||(18024376-18024462)
chr6 (3-85)||(32173712-32173794)
chr6 (3-87)||(23350353-23350437)
chr6 (3-85)||(34085845-34085927)
chr6 (3-87)||(11369081-11369165)
chr6 (3-86)||(8525525-8525608)
chr6 (3-83)||(5714880-5714960)
chr6 (3-90)||(8811304-8811391)
chr6 (3-89)||(6625355-6625441)
chr6 (3-72)||(29623173-29623242)
chr6 (3-63)||(3094611-3094671)
chr6 (3-63)||(18893698-18893758)
chr6 (3-63)||(29122355-29122415)
chr6 (3-63)||(29630497-29630557)
chr6 (3-90)||(7080968-7081055)
chr6 (3-64)||(13445403-13445464)
chr6 (3-88)||(13889959-13890044)
chr6 (3-63)||(6167937-6167997)
chr6 (98-134)||(8011025-8011061)
[»] chr8 (49 HSPs)
chr8 (3-86)||(31793850-31793933)
chr8 (3-83)||(12722559-12722639)
chr8 (1-89)||(35329725-35329813)
chr8 (3-89)||(41942362-41942448)
chr8 (3-86)||(38945688-38945771)
chr8 (3-86)||(42687942-42688025)
chr8 (3-85)||(5347478-5347560)
chr8 (3-87)||(4005764-4005848)
chr8 (3-87)||(36057733-36057817)
chr8 (1-66)||(39712697-39712762)
chr8 (11-87)||(17601333-17601409)
chr8 (3-87)||(38234416-38234500)
chr8 (3-85)||(4229637-4229719)
chr8 (2-83)||(7970033-7970114)
chr8 (3-88)||(38168486-38168571)
chr8 (11-63)||(8013933-8013985)
chr8 (11-63)||(37578006-37578058)
chr8 (15-87)||(38460114-38460186)
chr8 (3-90)||(2828315-2828402)
chr8 (11-89)||(5599869-5599947)
chr8 (11-89)||(5640673-5640751)
chr8 (11-89)||(28885720-28885798)
chr8 (3-88)||(3137225-3137310)
chr8 (11-88)||(11587896-11587973)
chr8 (3-63)||(5988211-5988271)
chr8 (3-63)||(8376263-8376323)
chr8 (11-63)||(15839478-15839530)
chr8 (3-63)||(22439606-22439666)
chr8 (3-63)||(24822724-24822784)
chr8 (3-63)||(26290779-26290839)
chr8 (3-63)||(26304036-26304096)
chr8 (3-63)||(26337391-26337451)
chr8 (11-63)||(28909685-28909737)
chr8 (3-87)||(35605336-35605420)
chr8 (3-63)||(39365269-39365329)
chr8 (1-44)||(16571248-16571291)
chr8 (98-152)||(2669717-2669770)
chr8 (3-85)||(11266134-11266216)
chr8 (3-44)||(5552-5593)
chr8 (98-163)||(2563427-2563491)
chr8 (3-88)||(3032898-3032983)
chr8 (3-88)||(17122088-17122173)
chr8 (3-88)||(26122526-26122611)
chr8 (3-44)||(34917580-34917621)
chr8 (3-44)||(42512201-42512242)
chr8 (3-44)||(43664325-43664366)
chr8 (3-63)||(8656577-8656637)
chr8 (98-134)||(9782252-9782288)
chr8 (3-63)||(23357257-23357317)
[»] chr7 (47 HSPs)
chr7 (3-86)||(12847175-12847258)
chr7 (2-87)||(19473937-19474021)
chr7 (3-88)||(24980853-24980938)
chr7 (1-88)||(20492682-20492769)
chr7 (12-90)||(25764870-25764948)
chr7 (3-86)||(40305474-40305557)
chr7 (3-89)||(43775880-43775966)
chr7 (3-88)||(40862357-40862442)
chr7 (3-88)||(45870170-45870255)
chr7 (3-87)||(10594083-10594167)
chr7 (15-87)||(29042143-29042215)
chr7 (3-83)||(39597870-39597950)
chr7 (3-86)||(47540290-47540373)
chr7 (3-86)||(47546847-47546930)
chr7 (3-89)||(12428596-12428682)
chr7 (1-87)||(7883674-7883761)
chr7 (3-86)||(8203438-8203521)
chr7 (3-86)||(8215915-8215998)
chr7 (3-91)||(38876051-38876139)
chr7 (3-86)||(42436505-42436588)
chr7 (3-86)||(48612861-48612944)
chr7 (3-88)||(26015863-26015948)
chr7 (3-88)||(30173463-30173548)
chr7 (11-88)||(39074361-39074438)
chr7 (3-88)||(43246954-43247039)
chr7 (3-63)||(7790926-7790986)
chr7 (3-63)||(7900456-7900516)
chr7 (8-88)||(25066568-25066648)
chr7 (3-63)||(32542180-32542240)
chr7 (3-63)||(35924253-35924313)
chr7 (3-63)||(38283588-38283648)
chr7 (11-63)||(42095779-42095831)
chr7 (11-63)||(43047091-43047143)
chr7 (3-63)||(46322043-46322103)
chr7 (3-63)||(46923901-46923961)
chr7 (3-63)||(47065937-47065997)
chr7 (3-63)||(47779506-47779566)
chr7 (1-87)||(36688734-36688820)
chr7 (3-86)||(46101804-46101887)
chr7 (1-56)||(48641965-48642020)
chr7 (1-83)||(241685-241767)
chr7 (3-93)||(21279066-21279156)
chr7 (3-89)||(32662365-32662451)
chr7 (3-91)||(25225512-25225600)
chr7 (3-91)||(34591671-34591759)
chr7 (2-86)||(39598531-39598615)
chr7 (3-63)||(40705509-40705569)
[»] chr2 (31 HSPs)
chr2 (3-90)||(13480551-13480638)
chr2 (1-88)||(40659235-40659322)
chr2 (3-87)||(4331883-4331967)
chr2 (3-86)||(44798809-44798892)
chr2 (3-86)||(45443557-45443640)
chr2 (3-87)||(26170975-26171059)
chr2 (9-88)||(7722681-7722760)
chr2 (3-86)||(38629411-38629494)
chr2 (3-91)||(44456814-44456899)
chr2 (3-62)||(5109197-5109256)
chr2 (3-93)||(458611-458701)
chr2 (3-88)||(45505787-45505872)
chr2 (3-88)||(927062-927147)
chr2 (3-88)||(15011817-15011902)
chr2 (3-88)||(34202277-34202362)
chr2 (3-63)||(1481834-1481894)
chr2 (3-63)||(10638801-10638861)
chr2 (3-63)||(13196139-13196199)
chr2 (3-63)||(25853434-25853494)
chr2 (11-63)||(27980921-27980973)
chr2 (11-63)||(28067451-28067503)
chr2 (15-63)||(35895515-35895563)
chr2 (3-63)||(43577026-43577086)
chr2 (3-63)||(44143383-44143443)
chr2 (3-53)||(31569661-31569711)
chr2 (3-44)||(39697779-39697820)
chr2 (3-63)||(1520199-1520259)
chr2 (3-63)||(2390688-2390748)
chr2 (3-63)||(3178249-3178309)
chr2 (3-63)||(21657950-21658010)
chr2 (15-63)||(32551681-32551729)
[»] scaffold0007 (2 HSPs)
scaffold0007 (3-86)||(200033-200116)
scaffold0007 (3-63)||(157116-157176)
[»] scaffold0578 (1 HSPs)
scaffold0578 (3-85)||(8719-8801)
[»] scaffold0065 (1 HSPs)
scaffold0065 (11-63)||(38421-38473)
[»] scaffold0896 (1 HSPs)
scaffold0896 (3-90)||(3751-3838)
[»] scaffold0391 (1 HSPs)
scaffold0391 (3-89)||(3872-3958)
[»] scaffold0368 (1 HSPs)
scaffold0368 (3-88)||(13860-13945)
[»] scaffold0438 (1 HSPs)
scaffold0438 (3-63)||(2116-2176)
[»] scaffold0276 (1 HSPs)
scaffold0276 (3-63)||(12543-12603)
[»] scaffold0294 (1 HSPs)
scaffold0294 (3-41)||(12554-12592)
[»] scaffold0004 (1 HSPs)
scaffold0004 (100-152)||(227778-227829)


Alignment Details
Target: chr5 (Bit Score: 123; Significance: 4e-63; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 97 - 336
Target Start/End: Complemental strand, 36206111 - 36205873
Alignment:
Q  97 taacttatgaatatacaattttcattagtatgatcttaatgatctaacataaaa-gcattactatttgcgtaagcnnnnnnnca--agttcaacgtgaga 193  Q
    ||||||||||||||||||||||| |||||| ||||||| ||| ||||||||||| ||||||||||||||||||||        |  |||||||| |||||    
T  36206111 taacttatgaatatacaattttcgttagtaagatctta-tgaactaacataaaaagcattactatttgcgtaagcttttttttataagttcaacttgaga 36206013  T
Q  194 tgctcaagatttgataaagaatgcaaaaatatgatattgtgtaatcacactatagccttaattaaaatctannnnnnngtcacatttgctaccaatgaaa 293  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||| |||||||||     
T  36206012 tgctcaagatttgataaagaatgcaaaaatataatattgtgtaatcacactatagccttaattaaaatctattttattgtcac-tttgcgaccaatgaat 36205914  T
Q  294 ggatggcagtatatattgtatataggaagaaagaaaccacttg 336  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  36205913 ggatggcag--tatattgtatataggaagaaagaaaccacttg 36205873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 18864513 - 18864428
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||| |||||||||||||||    
T  18864513 tttttaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactctt 18864428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 12189308 - 12189393
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||| |||||||||||| ||||||| | ||||||||||||||||||||||||| |||||||||||||||    
T  12189308 ttttgaaaattaaattttatggaagggtaattttatcattttggggtgtaaccaggattaaacaaggtgtaattagaaaaactctt 12189393  T

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Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 40738975 - 40738891
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||||||||    
T  40738975 ttttgaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactct 40738891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 36294265 - 36294178
Alignment:
Q  2 ctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    ||||| |||||||||||||||| |||||||||||||||||||| | ||||||||| ||||||||| ||||| ||||||||||||||||    
T  36294265 cttttgaaaattaaattttatggaagggtaattttgtcattttggggtgtaaccatgattaaacatggtgtaattagaaaaactctta 36294178  T

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Target: chr5; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 4621229 - 4621143
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| ||||||||||||||||||||||||||||||||||||| |  || |||||||||||||| |||||| |||||||||||||||||    
T  4621229 ttttgaaaattaaattttatgaaagggtaattttgtcattttaggatgcaaccaggattaaac-aggtgtaattagaaaaactcttaa 4621143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 10666139 - 10666225
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||| ||||| |||| |||||||||||    
T  10666139 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacagggtgtaattataaaaactctta 10666225  T

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Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 31498920 - 31498837
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||| ||| || |||||||| ||||| |||||||||||||    
T  31498920 ttttgaaaattaaattttatggaagggtaattttgtcattttagagtgcaacaagaattaaacagggtgtaattagaaaaactc 31498837  T

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Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 6245270 - 6245188
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||||||| |||||||||||||| | ||||| |||||| |||||||| ||||| ||||||||||||    
T  6245270 ttttgaaaattaaattttatgaaagtgtaattttgtcattctagagtgcaaccagaattaaacagggtgtaattagaaaaact 6245188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 37105933 - 37105851
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| ||||||||||||||||||||||||||||||||||||| || || || ||||||||||||  |||| ||||||||||||    
T  37105933 ttttgaaaattaaattttatgaaagggtaattttgtcattttagaatgcaatcaggattaaacattgtgtaattagaaaaact 37105851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 7338703 - 7338624
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaa 82  Q
    |||| ||||||||||||||||||| ||||||||||||||||| | ||| |||||||||||||||  |||| |||||||||    
T  7338703 ttttgaaaattaaattttatgaaaaggtaattttgtcattttggggtgcaaccaggattaaacagagtgtcattagaaaa 7338624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 31484732 - 31484649
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| |||||| |||||||| | ||| |||||||||||||    
T  31484732 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccagaattaaacaggctgtaattagaaaaactc 31484649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 43548585 - 43548668
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| | ||| ||||||||||||||| ||||| |||||||||||||    
T  43548585 ttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactc 43548668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 15272771 - 15272853
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| |||| |||||||| ||||||  |||| ||||||||||||||| ||||| ||||||||||||    
T  15272771 ttttgaaaattaaattttatggaaggataattttgacattttgaagtgcaaccaggattaaacagggtgtaattagaaaaact 15272853  T

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Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 8232626 - 8232542
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||||||||||||| || ||||||| | ||| |||||||||||| ||  |||| ||||||||||||||    
T  8232626 ttttgaaaattaaattttatgaaagggtaatcttatcattttggggtgcaaccaggattaagcagagtgtaattagaaaaactct 8232542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 37274617 - 37274697
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| || |||||||||||  ||||| ||||||||||    
T  37274617 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaagcaggattaaactgggtgtaattagaaaaa 37274697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 41881922 - 41882005
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| || ||||||||||||||||| | ||| |||||  |||||||| ||||| |||||||||||||    
T  41881922 ttttgaaaattaaattttatggaaaggtaattttgtcattttggggtgcaaccaaaattaaacagggtgtaattagaaaaactc 41882005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 42437377 - 42437460
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| | ||| |||||||||||||||  |||| |||||||||||||    
T  42437377 ttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagagtgtaattagaaaaactc 42437460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 18978533 - 18978453
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||| |||||||||||||||  |||| ||||| ||||||||| | ||| ||||||||||||||| ||||| ||||||||||    
T  18978533 ttttgaaaattaaattttatagaaggataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaa 18978453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 18522244 - 18522158
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| |||||||||||||||| |||| ||||||||| ||||| | ||| |||||||||| || || |||| |||||||||||||||||    
T  18522244 ttttgaaaattaaattttatggaaggataattttgttattttagggtgcaaccaggatt-aataatgtgtaattagaaaaactcttaa 18522158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 37340883 - 37340796
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| |  || || ||| |||||||| ||||| |||||||||||||||||    
T  37340883 ttttgaaaattaaattttatggaaggataattctgtcattttgggatgcaatcagaattaaacagggtgtaattagaaaaactcttaa 37340796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 6469944 - 6470020
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||  ||||||  | ||||||||||||    
T  6469944 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaaggtgcaagtagaaaaactct 6470020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 31527580 - 31527640
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  31527580 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaa 31527640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 13210991 - 13211060
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgt 72  Q
    |||| |||||||||||||||| ||  ||||||||||||||||   ||| ||||||||||||||| |||||    
T  13210991 ttttgaaaattaaattttatggaacagtaattttgtcattttaaggtgcaaccaggattaaacagggtgt 13211060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 4156171 - 4156231
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  4156171 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 4156231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 9065781 - 9065721
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  9065781 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 9065721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 13145883 - 13145943
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  13145883 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 13145943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 25084931 - 25084879
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  25084931 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 25084879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 25142904 - 25142852
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  25142904 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 25142852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 10552588 - 10552506
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| |||  |||||||||||||||    || |||||||||||| || | ||| ||||||||||||    
T  10552588 ttttgaaaattaaattttatggaagaataattttgtcattttaagatgcaaccaggattaatcaggatgtaattagaaaaact 10552506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 19034723 - 19034808
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| ||||||||||||||| |||| |||| ||||| | ||| ||||| ||||||  ||||||  | |||||||||||||    
T  19034723 ttttgaaaatcaaattttatgaaaggataatcttgttattttggggtgcaaccatgattaactaaggtgcaagtagaaaaactctt 19034808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 24559151 - 24559110
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  24559151 ttttgaaaatcaaattttatgaaagggtaatcttgtcatttt 24559110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 24600183 - 24600142
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  24600183 ttttgaaaatcaaattttatgaaagggtaatcttgtcatttt 24600142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 33280892 - 33280851
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  33280892 ttttgaaaatcaaattttatgaaagggtaatcttgtcatttt 33280851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 37865958 - 37865917
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| ||||||||||||||| |||||||||||||||    
T  37865958 ttttgaaaatcaaattttatgaaaggataattttgtcatttt 37865917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 38760537 - 38760585
Alignment:
Q  15 aattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  38760537 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 38760585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 43518294 - 43518354
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||| | |||||||||| | ||| ||||| ||||||    
T  43518294 ttttgaaaatcaaattttatgaaagggtactcttgtcattttggggtgcaaccatgattaa 43518354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 7009093 - 7009006
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  7009093 gctttttaaaattaaattttatgaaagggtaattttgttattttggggtgtaaccaggattaaacagggtgtgattagaaaaactctt 7009006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24527635 - 24527726
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaata 92  Q
    |||||||||||||||||||||||||| |||||||||| |||||| || || || |||||||||||| |||||||||||||||||||| ||||    
T  24527635 gctttttaaaattaaattttatgaaatggtaattttggcattttggaatgcaatcaggattaaacagggtgtgattagaaaaactctaaata 24527726  T

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Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 29922226 - 29922309
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||| |||||||||||||    
T  29922226 ttttgaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactc 29922309  T

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Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 40498700 - 40498613
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| ||||| |||||||||||||||||    
T  40498700 ttttgaaaattaaattttatgaaagggtaattttgtcattttggggtgcaaccagaattaaacagggtgtaattagaaaaactcttaa 40498613  T

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Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 51776112 - 51776028
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||||||||||||||||||| |  || ||||||||||||||| ||||| ||||||||||||||    
T  51776112 ttttaaaaattaaattttatggaagggtaattttgtcattttgggatgcaaccaggattaaacagggtgtaattagaaaaactct 51776028  T

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Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 17605810 - 17605725
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||| || ||||||||||||||||| | ||| ||||||||||| ||| ||||| |||||||||||||||    
T  17605810 ttttgaaaattaaattttatggaaaggtaattttgtcattttagggtgcaaccaggattacacagggtgtaattagaaaaactctt 17605725  T

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Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 51002033 - 51002118
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||||||||||||||||||| ||||||||||||||| | ||| || |||||||||||| ||| | |||||||||||||||    
T  51002033 ttttgaaaattaaattttatgaaaggataattttgtcattttagggtgcaatcaggattaaacagggtataattagaaaaactctt 51002118  T

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Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 9640893 - 9640979
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||||||||||||| ||||||||||||||||||||| |  || |||||||||| || | ||||| ||||||||||||||||    
T  9640893 ttttgaaaattaaattttataaaagggtaattttgtcattttaggatgcaaccaggattgaaaagggtgtaattagaaaaactctta 9640979  T

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Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 26307929 - 26307843
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| |||||||||||||||| |||| |||||||||||||||   ||| ||||| ||||||||| ||||| ||||||||||||||||    
T  26307929 ttttgaaaattaaattttatggaaggataattttgtcattttaaggtgcaaccaagattaaacagggtgtaattagaaaaactctta 26307843  T

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Target: chr1; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 32086566 - 32086480
Alignment:
Q  2 ctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    ||||| |||||||||||||||| |||| ||||| ||||||||| | ||| || |||||||||||| ||||| |||||||||||||||    
T  32086566 cttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaatcaggattaaacagggtgtaattagaaaaactctt 32086480  T

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Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 13146107 - 13146022
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    ||||||| ||| | ||||||||| ||| |||||||||||||||| | ||| ||||||||||||||| ||||| |||||||||||||    
T  13146107 gctttttgaaaattaattttatggaagagtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactc 13146022  T

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Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 41712843 - 41712763
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| | ||| ||||||||||||||| ||||| ||||||||||    
T  41712843 ttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaa 41712763  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 32561335 - 32561260
Alignment:
Q  15 aattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    ||||||||  |||||||||||||||||||||  ||| |||||||||||| || ||||| |||||||||||||||||    
T  32561335 aattttatagaagggtaattttgtcatttttaggtgcaaccaggattaatcatggtgtaattagaaaaactcttaa 32561260  T

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Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 35273909 - 35273826
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| |  || ||||||||||||||||||| | |||||||||||||    
T  35273909 ttttgaaaattaaattttatggaaggataattctgtcattttaggatgcaaccaggattaaacaaggtttaattagaaaaactc 35273826  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 17474747 - 17474665
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| ||||||||||||||||||||| ||||||||||||||| |  || ||||||||||||| | | ||| ||||||||||||    
T  17474747 ttttgaaaattaaattttatgaaaggataattttgtcattttaggatgcaaccaggattaaagaggatgtaattagaaaaact 17474665  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 23444343 - 23444424
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaa 82  Q
    |||||| ||||||||||||||||||||| ||||||||||||| | | ||| ||||| ||||||| | ||||| |||||||||    
T  23444343 gcttttgaaaattaaattttatgaaaggataattttgtcattgtggggtgcaaccaagattaaatagggtgtaattagaaaa 23444424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 8114906 - 8114990
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||||||||||| || |||| ||||||||||||||| | ||| |||||||||||||||  |||| |||| |||||||||    
T  8114906 ttttgaaaattaaattttctggaaggataattttgtcattttagggtgcaaccaggattaaacagtgtgtaattaaaaaaactct 8114990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 12601936 - 12601849
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaat 91  Q
    |||| |||||||||||||||| |||  ||||||||||||||| || || |||||| |||||||| ||||| ||||||||||||| ||||    
T  12601936 ttttgaaaattaaattttatggaagaataattttgtcattttgga-tgcaaccagaattaaacagggtgtaattagaaaaactcataat 12601849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 19247779 - 19247859
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||| ||||| |||||||||| |||||||||||| ||||||| |  || ||||||||||||||||| ||| ||||||||||    
T  19247779 ttttgaaaataaaattttatggaagggtaattttatcattttaggatgcaaccaggattaaacaagatgtaattagaaaaa 19247859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 3485899 - 3485812
Alignment:
Q  3 tttttaaaattaaatttt-atgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||||||||||| || ||||| ||||||||| |||||  |||||||||| ||||||||| ||||| |||| |||||||||||    
T  3485899 ttttgaaaattaaatttttataaaaggataattttgttattttgaagtgtaaccaagattaaacagggtgtaattaaaaaaactctta 3485812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 6016615 - 6016698
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||  || | |||||||||||||||  | || ||||||||||||||| ||||| |||||||||||||    
T  6016615 ttttaaaaattaaattttatagaatgataattttgtcattttaaaatgcaaccaggattaaacagggtgtaattagaaaaactc 6016698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 19514138 - 19514220
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| ||| |||||||||| |||||    || ||||||||||||||| ||||| ||||||||||||    
T  19514138 ttttgaaaattaaattttatggaagagtaattttgttattttaagatgcaaccaggattaaacagggtgtaattagaaaaact 19514220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 14290295 - 14290356
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaa 64  Q
    |||| |||||||||||||||| ||||||||||||||||||||   ||| |||||||||||||    
T  14290295 ttttgaaaattaaattttatggaagggtaattttgtcattttaaggtgcaaccaggattaaa 14290356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 48933286 - 48933209
Alignment:
Q  15 aattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaata 92  Q
    ||||||||| |||||||||||| |||||||   ||| ||||| |||||| || ||||| |||||||||||||||||||    
T  48933286 aattttatggaagggtaattttatcattttgaggtgcaaccatgattaatcagggtgtaattagaaaaactcttaata 48933209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 20581582 - 20581522
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||||||||||||||||||| | ||| ||||| ||||||    
T  20581582 ttttgaaaatcaaattttatgaaagggtaattttgtcattttggggtgcaaccatgattaa 20581522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 5672974 - 5672915
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggatta 62  Q
    |||| |||||||||||||||| |||||||||||||||||||| |  || |||||||||||    
T  5672974 ttttgaaaattaaattttatggaagggtaattttgtcattttaggatgcaaccaggatta 5672915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 18909298 - 18909215
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||||| |||||||||||||||||||| |||||||||| || || ||||| ||||||  | ||||| | |||||||||||    
T  18909298 ttttgaaaatcaaattttatgaaagggtaatattgtcattttggaatgcaaccatgattaactagggtgtaagtagaaaaactc 18909215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 33010787 - 33010873
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||||    
T  33010787 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctta 33010873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 42948272 - 42948187
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  42948272 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactctt 42948187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 2482633 - 2482693
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  2482633 ttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaa 2482693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 11173509 - 11173561
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  11173509 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 11173561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 13942226 - 13942142
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||| | ||||  | ||||||||||||    
T  13942226 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaaatagggtgcaagtagaaaaactct 13942142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 14247456 - 14247532
Alignment:
Q  13 taaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    ||||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||||    
T  14247456 taaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctta 14247532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 24317264 - 24317204
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  24317264 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 24317204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 28852920 - 28852980
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  28852920 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaa 28852980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 39569456 - 39569516
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  39569456 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 39569516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 39982338 - 39982286
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  39982338 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 39982286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 40400116 - 40400056
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  40400116 ttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaa 40400056  T

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Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 51290624 - 51290572
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  51290624 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 51290572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 13240225 - 13240280
Alignment:
Q  8 aaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  13240225 aaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 13240280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 46291824 - 46291907
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |   ||||||||||||||||    || ||||||||||||| || |||| |||||||||||||    
T  46291824 ttttaaaaattaaattttatggataagtaattttgtcattttaagatgcaaccaggattaaataatgtgtaattagaaaaactc 46291907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 6653296 - 6653247
Alignment:
Q  14 aaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  6653296 aaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 6653247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 15932869 - 15932784
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  15932869 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 15932784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 16708871 - 16708904
Alignment:
Q  101 ttatgaatatacaattttcattagtatgatctta 134  Q
    |||||||||||||||||||||||||| |||||||    
T  16708871 ttatgaatatacaattttcattagtaagatctta 16708904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 40536797 - 40536830
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttt 44  Q
    ||||||||||||||||||||||| ||||||||||    
T  40536797 attaaattttatgaaagggtaatcttgtcatttt 40536830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 34270774 - 34270834
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||    
T  34270774 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaa 34270834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 44721954 - 44721894
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| || ||||||| | ||| ||||| ||||||    
T  44721954 ttttgaaaatcaaattttatgaaagggtaatcttatcattttggggtgcaaccatgattaa 44721894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 50727880 - 50727820
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||    
T  50727880 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaa 50727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 52024808 - 52024748
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||||||||  ||||||||| | ||| ||||| ||||||    
T  52024808 ttttgaaaatcaaattttatgaaagggtaatcctgtcattttggggtgcaaccatgattaa 52024748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 52044390 - 52044450
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| || ||||||| | ||| ||||| ||||||    
T  52044390 ttttgaaaatcaaattttatgaaagggtaatcttatcattttggggtgcaaccatgattaa 52044450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 8713309 - 8713227
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||||||||    
T  8713309 gctttttaaaattaaattttatgaaagggtaattttgtcattttggggtgtaacaaggattaaacagggtgtgattagaaaaa 8713227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 22301757 - 22301842
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | ||| ||||||||||||||| |||||||||||||||||||    
T  22301757 gctttttaaaattaaattttatgaaagggtaattttgttattttggggtgcaaccaggattaaacagggtgtgattagaaaaactc 22301842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 37683274 - 37683359
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  37683274 gctttttaaaattaaattttatgaaatgataattttgacattttggagtgtaaccaggattaaacagggtgtgattagaaaaactc 37683359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 24897068 - 24896981
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| ||| |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||    
T  24897068 ttttgaaacttaaattttatgaaagagtaattttgtcattttggggtgtaaccaggattaaacaaggtgtaattagaaaaactcttaa 24896981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 32135441 - 32135358
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaac 84  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |  ||||||||| |||||||| |||||||||| ||||||    
T  32135441 gctttttaaaattaaattttatgaaaaggtaattttgtcattttaggatgtaaccagcattaaacagggtgtgattaaaaaaac 32135358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 41202360 - 41202449
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaata 92  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| | ||| ||||||||||||||| ||||| |||||||||||||||||||    
T  41202360 ttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacatggtgtaattagaaaaactcttaata 41202449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 40430205 - 40430121
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||| | ||| ||||||||||||||    
T  40430205 ttttgaaaattaaattttatggaagggtaattttgtcattttagggtgcaaccaggattaaacatgatgtaattagaaaaactct 40430121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 48349499 - 48349583
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||||||||||||| ||| ||||||||| ||||||| ||||  ||||||||||||||||||||| ||||||||||||||    
T  48349499 ttttgaaaattaaattttataaaaaggtaattttatcattttagagtacaaccaggattaaacaaggtgtaattagaaaaactct 48349583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 35339659 - 35339742
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| ||||||||| |||||||||| | ||| ||||||||||||||| ||||| |||||||||||||    
T  35339659 ttttgaaaattaaattttatggaagggtaatcttgtcattttagggtgcaaccaggattaaacatggtgtaattagaaaaactc 35339742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 49340 - 49414
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgatta 77  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| ||||| ||||    
T  49340 ttttaaaaattaaattttatgaaagggtaattttgtcattttagagtgcaaccaagattaaacagggtgtaatta 49414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 50561649 - 50561563
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    ||||||| ||| | ||||||||| |||||||||||||||||||| ||||| |||||||||||||||  |||| ||||||||||||||    
T  50561649 gctttttgaaaattaattttatggaagggtaattttgtcattttagagtgcaaccaggattaaacagagtgtaattagaaaaactct 50561563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 22847187 - 22847098
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaata 92  Q
    |||| ||||||||||||||||||| | ||||| ||||||||| | ||| ||||||||||||||| ||||| |||||||||||||| ||||    
T  22847187 ttttgaaaattaaattttatgaaaagataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactctaaata 22847098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 43458406 - 43458490
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| ||||| ||||||||| ||||| |||| |||||||||    
T  43458406 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccatgattaaacagggtgtaattataaaaactct 43458490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 24034601 - 24034518
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||  |||||| |||||||| ||||| |||||||||||||    
T  24034601 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtacaaccagaattaaacagggtgtaattagaaaaactc 24034518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 1522866 - 1522781
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||| ||| |||||||||||||||| |  || ||||||||||||||| ||| | |||||||||||||||    
T  1522866 ttttgaaaattaaattttatggaagagtaattttgtcattttaggatgcaaccaggattaaacagggtataattagaaaaactctt 1522781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 48990428 - 48990343
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||| |||||||||||| ||||||| | ||| ||| ||||||||| | ||||| |||||||||||||||    
T  48990428 ttttgaaaattaaattttatggaagggtaattttatcattttagggtgcaacgaggattaaatagggtgtaattagaaaaactctt 48990343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 28803983 - 28804066
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||  ||||| ||||||||| ||||  |||||||||||||    
T  28803983 ttttgaaaattaaattttatggaagggtaattttgtcattttagggtacaaccatgattaaacagggtgcaattagaaaaactc 28804066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 47467422 - 47467505
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||| ||||||||||| |||||||||||||||||||| |  || ||||| ||||||||| ||||| |||||||||||||    
T  47467422 ttttaaaaactaaattttatggaagggtaattttgtcattttgggatgcaaccatgattaaacagggtgtaattagaaaaactc 47467505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 11682291 - 11682206
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| | ||| |||||||||| ||||   ||| |||||||||||||||    
T  11682291 ttttgaaaattaaattttatgaaaggataattttatcattttagggtgcaaccaggattgaacagaatgtaattagaaaaactctt 11682206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 11690570 - 11690485
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| | ||| |||||||||| ||||   ||| |||||||||||||||    
T  11690570 ttttgaaaattaaattttatgaaaggataattttatcattttagggtgcaaccaggattgaacagaatgtaattagaaaaactctt 11690485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 13962490 - 13962575
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    ||||||| ||| | ||||||||| || ||||||||||||||||| | ||| ||| ||||||||||| ||||| |||||||||||||    
T  13962490 gctttttgaaaattaattttatggaaaggtaattttgtcattttggggtgcaactaggattaaacagggtgtaattagaaaaactc 13962575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 3026464 - 3026381
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| |  || || ||||||| |||| ||| | |||||||||||||    
T  3026464 ttttgaaaattaaattttatggaagggtaattttgtcattttaggatgcaatcaggatttaacagggtttaattagaaaaactc 3026381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 32932667 - 32932581
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgag-tgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    ||||||||||||||||||||||||  |||||||||||| ||||||| || |||||| |||||||| | | | ||||||||||||||||    
T  32932667 tttttaaaattaaattttatgaaaatgtaattttgtca-ttttgagatgcaaccagaattaaacaggatataattagaaaaactctta 32932581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 43621589 - 43621672
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||||||||||||||| ||||| ||||||||||||||| |  || || |||||||||| | ||||| |||||||||||||    
T  43621589 ttttgaaaattaaattttataaaaggataattttgtcattttaggatgcaatcaggattaaaaagggtgtaattagaaaaactc 43621672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 30217138 - 30217220
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| |||| |||||||||||||||| | || ||||||||||||| | |  || ||||||||||||    
T  30217138 ttttgaaaattaaattttatggaaggataattttgtcatttttaaatgcaaccaggattaaataggacgtaattagaaaaact 30217220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 34159093 - 34159011
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||  |||| |||||||||||||||    || |||||| |||||||||||||| ||||||||||||    
T  34159093 ttttgaaaattaaattttatagaaggataattttgtcattttaagatgcaaccagaattaaacaaggtgtaattagaaaaact 34159011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 50602048 - 50602126
Alignment:
Q  8 aaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    ||||||||||||||| ||||| ||||||||| |||||  | || ||||||||||||||| ||||| |||| ||||||||    
T  50602048 aaaattaaattttataaaaggataattttgttattttaaaatgcaaccaggattaaacagggtgtaattaaaaaaactc 50602126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 19874137 - 19874226
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaata 92  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||||||    
T  19874137 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaagtagggtgcaagtagaaaaactcttaata 19874226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 50469146 - 50469062
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||||||| |||||  |||| ||||||| ||||||| ||||  ||||||||||||||| | ||| ||||||||||||||    
T  50469146 ttttaaaaattaaagtttatagaaggataattttatcattttagagtacaaccaggattaaacaggatgtaattagaaaaactct 50469062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 51322732 - 51322649
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||||||||||||||||||| ||||||| |||||||   ||| ||||| |||||||| || ||| ||||||||||||||    
T  51322732 ttttgaaaattaaattttatgaaaggataattttatcattttgaggtgcaaccaagattaaac-agatgtaattagaaaaactct 51322649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 51322404 - 51322487
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||| || |||| |  || |||||| ||||||||  |||| |||||||||||||    
T  51322404 ttttgaaaattaaattttatggaagggtaattttatccttttgggatgcaaccagaattaaacagagtgtaattagaaaaactc 51322487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 2702732 - 2702679
Alignment:
Q  98 aacttatgaatatacaattttcattagtatgatcttaatgatctaacataaaagc 152  Q
    ||||||||||||||||||||||||||||| |||||| ||||  ||||||||||||    
T  2702732 aacttatgaatatacaattttcattagtaagatctt-atgaattaacataaaagc 2702679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 37828835 - 37828750
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||||||||||||||| ||||||||||||| |||||    || ||||| |||||||  |||||| ||||||||||||||||    
T  37828835 ttttgaaaattaaattttatgagagggtaattttgttattttgatatgcaaccaagattaaa-gaggtgtaattagaaaaactctta 37828750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 39540416 - 39540501
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  39540416 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 39540501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 47429844 - 47429929
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    ||||||||| | ||||||||||||| |||||||| ||||||| |  || ||||||||||||| |   ||| |||||||||||||||    
T  47429844 tttttaaaaattaattttatgaaagagtaattttatcattttaggatgcaaccaggattaaatagaatgtaattagaaaaactctt 47429929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 52913208 - 52913293
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  52913208 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 52913293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 53036035 - 53036116
Alignment:
Q  8 aaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||||    
T  53036035 aaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctta 53036116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 53875125 - 53875210
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  53875125 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 53875210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 613906 - 613846
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  613906 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 613846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 10542047 - 10542107
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  10542047 ttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaa 10542107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 20434245 - 20434185
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  20434245 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 20434185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 20737765 - 20737713
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  20737765 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 20737713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 42348743 - 42348655
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaat 91  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||||||    
T  42348743 ttttgaaaatcaaattttatgaaaggataatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactcttaat 42348655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 42724196 - 42724256
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  42724196 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 42724256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 52839747 - 52839807
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||||||||| |||| | ||| ||||| ||||||    
T  52839747 ttttgaaaatcaaattttatgaaagggtaattttgtcgttttggggtgcaaccatgattaa 52839807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 55219950 - 55219890
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  55219950 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 55219890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 56018716 - 56018768
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  56018716 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 56018768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 56362901 - 56362841
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  56362901 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 56362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 55215608 - 55215695
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||||    
T  55215608 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcttaa 55215695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 168
Target Start/End: Complemental strand, 22397322 - 22397253
Alignment:
Q  98 aacttatgaatatacaattttcattagtatgatcttaatgatctaacataaaagcattactatttgcgtaa 168  Q
    |||||||||||||||||||||| |||||| |||||| ||||  |||| ||||||| | | |||||||||||    
T  22397322 aacttatgaatatacaattttcgttagtaagatctt-atgaattaacttaaaagcttaattatttgcgtaa 22397253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 3019757 - 3019676
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaata 92  Q
    ||||||||| || ||||||||||||||||| |||   ||||||| || |||| ||| ||||| |||| ||||||||| ||||    
T  3019757 attaaatttgataaaagggtaattttgtcactttatggtgtaactagaattacacagggtgtaattaaaaaaactctaaata 3019676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 43830232 - 43830273
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  43830232 ttttgaaaatcaaattttatgaaagggtaatattgtcatttt 43830273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 7817850 - 7817806
Alignment:
Q  9 aaattaaattttatgaaagggtaattttgtcatttttgagtgtaa 53  Q
    ||||||||||||||  |||| ||||||||||||||| ||||||||    
T  7817850 aaattaaattttatttaaggataattttgtcattttagagtgtaa 7817806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 20293310 - 20293394
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||||||||||||   |||| ||||||| |||||||   ||| ||  |||||||||||| |||| ||||||||||||||    
T  20293310 ttttgaaaattaaattttaaagaaggataattttatcattttaaggtgcaattaggattaaacaaagtgtaattagaaaaactct 20293394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 28406453 - 28406513
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||    
T  28406453 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaa 28406513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 38291870 - 38291930
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| |||||||||||  ||| ||||| ||||||    
T  38291870 ttttgaaaatcaaattttatgaaaggttaatcttgtcattttttggtgcaaccatgattaa 38291930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 36232685 - 36232769
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||||||||    
T  36232685 tttttaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacatggtgtaattagaaaaactct 36232769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 36885754 - 36885842
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaat 91  Q
    |||| ||||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||||||||||||    
T  36885754 ttttgaaaataaaattttatgaaagggtaattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactcttaat 36885842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 38145254 - 38145339
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| | ||| |||||||||||||||    
T  38145254 ttttgaaaattaaattttatgaaagggtaattttgtcattttagggtgcaaccagaattaaacaggatgtaattagaaaaactctt 38145339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 33392594 - 33392510
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||||||||||||||||| ||||||||||||||||| | || |||||||||||||| | ||||| ||||||||||||||    
T  33392594 ttttgaaaattaaattttatgaaaaggtaattttgtcattttggggtataaccaggattaaatagggtgtaattagaaaaactct 33392510  T

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Target: chr3; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 35039655 - 35039572
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||| | ||||| |||||||||||||    
T  35039655 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaaaagggtgtaattagaaaaactc 35039572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 44354512 - 44354596
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| | ||| ||||||||||||||| ||||| ||||||||||||||    
T  44354512 ttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactct 44354596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 7681017 - 7681100
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| |||||| |||||| | ||||| |||||||||||||    
T  7681017 ttttgaaaattaaattttatggaagggtaattttgtcattttagggtgcaaccagaattaaatagggtgtaattagaaaaactc 7681100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 48584917 - 48584835
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| ||||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||  ||||| ||||| ||||||    
T  48584917 ttttgaaaattaaattttatgaaaggataattttgtcattttggagtacaaccaggattaaactgggtgtaattagtaaaact 48584835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 11123941 - 11123858
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| | | | ||||||||||||| |  |||| |||||||||||||    
T  11123941 ttttgaaaattaaattttatggaagggtaattttgtcattttggggcgcaaccaggattaaatagagtgtaattagaaaaactc 11123858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 51662176 - 51662258
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| |||| ||||||| ||||||| |  || ||||||||||||||||| ||| ||||||||||||    
T  51662176 ttttgaaaattaaattttatggaaggataattttatcattttaggatgcaaccaggattaaacaagatgtaattagaaaaact 51662258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 2613340 - 2613425
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||||||||||||||||||| ||||||| |||||||  | || ||||| ||||||||| ||||| |||||||| ||||||    
T  2613340 ttttgaaaattaaattttatgaaaggataattttatcattttgaaatgcaaccaagattaaacagggtgtaattagaaatactctt 2613425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 30418773 - 30418684
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaata 92  Q
    |||| |||||||||||||||  |||| ||||| ||||||||| ||||| | ||| ||||||||| ||||| |||||||||||||| ||||    
T  30418773 ttttgaaaattaaattttatagaaggataattctgtcattttggagtgcagccatgattaaacagggtgtaattagaaaaactctaaata 30418684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 19941765 - 19941681
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||  ||||||| ||||||| ||||| |||||| ||||||||  |||| ||||||||||||||    
T  19941765 ttttgaaaattaaattttatggaagaataattttatcattttagagtgcaaccagaattaaacagtgtgtaattagaaaaactct 19941681  T

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Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 41588962 - 41588879
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||||||||||| |||||||||||||| |||||||| |||||||    ||||||||  |||||||| ||||||||||||||||||    
T  41588962 gctttttaaaat-aaattttatgaaagagtaattttatcattttaagatgtaaccaaaattaaacacggtgtgattagaaaaact 41588879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 4596437 - 4596523
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    ||||||| ||| | ||||||||| |||||||||||||||||||| |  || ||| ||||||||||| | ||| ||||||||||||||    
T  4596437 gctttttgaaaattaattttatggaagggtaattttgtcattttgggatgcaactaggattaaacaggatgtaattagaaaaactct 4596523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 52812210 - 52812121
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaataa 93  Q
    |||| |||||||||||||||| |||  ||||||||||||||| || |  || |||||||||||| ||||| |||||||||||||| |||||    
T  52812210 ttttgaaaattaaattttatggaagaataattttgtcatttt-gaatacaatcaggattaaacagggtgtaattagaaaaactctaaataa 52812121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 14279189 - 14279112
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaa 80  Q
    |||| |||||||||||||||| ||  |||||||||||||||| | ||| ||||||||||||||  ||||| |||||||    
T  14279189 ttttgaaaattaaattttatggaaaagtaattttgtcattttagggtgcaaccaggattaaacggggtgtaattagaa 14279112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 20657409 - 20657486
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||  | ||||  | |||||||||||||    
T  20657409 attaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactagggtgcaagtagaaaaactctt 20657486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 35233678 - 35233747
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgt 72  Q
    ||||||||| | |||||||||||||| ||||||| ||||||| || || ||||||||||||||| |||||    
T  35233678 tttttaaaaattaattttatgaaaggataattttatcattttagaatgcaaccaggattaaacagggtgt 35233747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 100
Target Start/End: Complemental strand, 38871203 - 38871106
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaataagtttaac 100  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||||| |||| ||||    
T  38871203 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactcttaaaaagtgtaac 38871106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 7679719 - 7679771
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  7679719 attaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaa 7679771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 47098317 - 47098400
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcattt-ttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||||| |||||||||| |||||||||||||||||||  ||| | |||||||||||| ||| ||||| |||||||||||||    
T  47098317 ttttgaaaatgaaattttatgcaagggtaattttgtcatttcatga-tataaccaggattacacagggtgtaattagaaaaactc 47098400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 49779868 - 49779947
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||| ||||||||||||||||||| | ||||||||||||||| |  || ||||| |||||||| |||||| ||||||||||    
T  49779868 ttttgaaaattaaattttatgaaaagataattttgtcattttgggatgcaaccaagattaaac-aggtgtaattagaaaaa 49779947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 4516028 - 4516115
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||||    
T  4516028 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactcttaa 4516115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 36841119 - 36841202
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||| |||||||   ||  ||||||||||||| | | ||| |||||||||||||    
T  36841119 ttttgaaaattaaattttatggaagggtaattttatcattttgaggtacaaccaggattaaaaaggatgtaattagaaaaactc 36841202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 39627134 - 39627185
Alignment:
Q  2 ctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaa 53  Q
    |||||||||| |||||||||| ||||| ||||||||||||||| ||||||||    
T  39627134 ctttttaaaaataaattttataaaaggataattttgtcattttagagtgtaa 39627185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 1774118 - 1774036
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| || ||||||||| || |||| | |||||||| |||||| ||| | ||| ||||||||||||    
T  1774118 ttttaaaaattaaattttatgtaaaggtaattttatcgttttggggtgtaaccgggattacacatgatgtaattagaaaaact 1774036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 52343165 - 52343083
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| |||  |||||||||||||||  |||  ||||| ||||||||| | ||| ||||||||||||    
T  52343165 ttttgaaaattaaattttatggaagaataattttgtcattttaaagttcaaccaagattaaacatgatgtaattagaaaaact 52343083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 84463 - 84411
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  84463 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 84411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 672142 - 672090
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| || ||||||| ||||| ||||| ||||||    
T  672142 attaaattttatgaaagggtaatcttatcattttggagtgcaaccatgattaa 672090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 10841446 - 10841506
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  10841446 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 10841506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 10999760 - 10999820
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  10999760 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 10999820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 11095730 - 11095647
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt-tgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||| ||||  ||||||| |||||||||||| ||| || ||||||||||||| | ||||| |||||||||||||    
T  11095730 ttttgaaaattaaatattatagaagggtatttttgtcattttatga-tgcaaccaggattaaatagggtgtaattagaaaaactc 11095647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 20048417 - 20048357
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  20048417 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 20048357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 20835596 - 20835656
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  20835596 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 20835656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 24395170 - 24395118
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  24395170 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 24395118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 25710969 - 25710909
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  25710969 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 25710909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 32236207 - 32236155
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  32236207 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 32236155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 33712637 - 33712697
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  33712637 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaa 33712697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 40586185 - 40586245
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  40586185 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 40586245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 26090276 - 26090198
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    ||||||||||||||||||||||| ||||||||||   ||| ||||| ||||||  | ||||  | ||||||||||||||    
T  26090276 attaaattttatgaaagggtaatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactctta 26090198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 33966978 - 33966892
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||| |||||||||||||||||||| |||||||||| |  || ||||| ||||||  | ||||  | ||||||||||||||    
T  33966978 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttgggatgcaaccatgattaactagggtgcaagtagaaaaactctta 33966892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 83
Target Start/End: Original strand, 8947901 - 8947954
Alignment:
Q  30 taattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    ||||||||||||||  |||||||||||||| || ||||||||  ||||||||||    
T  8947901 taattttgtcatttcggagtgtaaccaggaatatacaaggtgcaattagaaaaa 8947954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 22781921 - 22781962
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  22781921 ttttgaaaatcaaattttatgaaagggtaatcttgtcatttt 22781962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 35155774 - 35155859
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||  |||| ||||||| |||||||  |||| ||| |||||||||||  || | |||||||||| ||||    
T  35155774 ttttgaaaattaaattttatagaaggataattttatcattttgaagtgcaactaggattaaacagtgtttaattagaaaaattctt 35155859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 41069918 - 41069877
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  41069918 ttttgaaaatcaaattttatgaaagggtaatcttgtcatttt 41069877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 54556430 - 54556389
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| ||||||||||||||||||||||| |||||||    
T  54556430 ttttaaaaatcaaattttatgaaagggtaattttatcatttt 54556389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 4044822 - 4044882
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||| ||||| | ||| ||||| ||||||    
T  4044822 ttttgaaaatcaaattttatgaaagggtaatcttgttattttggggtgcaaccatgattaa 4044882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 18168502 - 18168550
Alignment:
Q  8 aaaattaaattttatgaaagggtaattttgtcatttttgagtgtaacca 56  Q
    |||||||||||||||  |||||||||||||| ||||| || ||||||||    
T  18168502 aaaattaaattttatttaagggtaattttgttattttagaatgtaacca 18168550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 20174957 - 20174921
Alignment:
Q  98 aacttatgaatatacaattttcattagtatgatctta 134  Q
    |||||||||||||||||||||| |||||| |||||||    
T  20174957 aacttatgaatatacaattttcgttagtaagatctta 20174921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 37971688 - 37971748
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||    
T  37971688 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaa 37971748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 53974393 - 53974333
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||| ||||||| |||||||||| | ||| ||||| ||||||    
T  53974393 ttttgaaaatcaaattttatgaatgggtaatcttgtcattttggggtgcaaccatgattaa 53974333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 31091151 - 31091234
Alignment:
Q  8 aaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaat 91  Q
    |||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||||||||||||    
T  31091151 aaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacatggtgtaattagaaaaactcttaat 31091234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 6925860 - 6925773
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| || |||||||||||| ||||| |||||||||||||||||    
T  6925860 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaatcaggattaaacagggtgtaattagaaaaactcttaa 6925773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 18024462 - 18024376
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||||| |||||||||||||| |||||||||||||| || ||||||||| |||||||| ||||| ||||||||||||||||    
T  18024462 ttttcaaaattagattttatgaaagggcaattttgtcattttagaatgtaaccagaattaaacagggtgtaattagaaaaactctta 18024376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 32173712 - 32173794
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| |  ||||||||| |||||||| ||||| ||||||||||||    
T  32173712 ttttgaaaattaaattttataaaatggtaattttgtcattttgggatgtaaccagaattaaacagggtgtaattagaaaaact 32173794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 23350437 - 23350353
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||| ||||||  ||||||| | ||| ||||||||||||||| ||||| ||||||||||||||    
T  23350437 ttttgaaaattaaattttatggaaggataatttgatcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactct 23350353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 34085845 - 34085927
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| |||| ||||||||||||||| | ||| ||||||||||| ||| ||||| |||| |||||||    
T  34085845 ttttgaaaattaaattttatggaaggataattttgtcattttggggtgcaaccaggattacacagggtgtaattaaaaaaact 34085927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 11369081 - 11369165
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||  ||| ||||||||||||||||   ||| ||||| ||||||||| ||||| ||||||||||||||    
T  11369081 ttttgaaaattaaattttatagaagagtaattttgtcattttgaggtgcaaccaagattaaacagggtgtaattagaaaaactct 11369165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 8525608 - 8525525
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||| ||||||| |  || |||||| ||||||||  |||| |||||||||||||    
T  8525608 ttttgaaaattaaattttatggaagggtaattttatcattttgggatgcaaccagaattaaacagtgtgtaattagaaaaactc 8525525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 5714960 - 5714880
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||| ||||||||||||||||||||||||||||||| |||||  |||| |||||| || || || | ||| ||||||||||    
T  5714960 ttttgaaaattaaattttatgaaagggtaattttgttattttgaagtgcaaccagaatcaatcaggatgtaattagaaaaa 5714880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 8811304 - 8811391
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| ||||| |||||||||| |||| ||||||| ||||||| | |||||||||||| || ||  ||||| |||||||||| ||||||    
T  8811304 ttttcaaaatcaaattttatgtaaggataattttatcattttggggtgtaaccaggaatatacggggtgtaattagaaaaattcttaa 8811391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 6625441 - 6625355
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||  | ||||| | ||||||||||||||    
T  6625441 ttttgaaaatcaaattttatgaaaggataatcttgtcattttagggtgcaaccatgattaactagggtgtaagtagaaaaactctta 6625355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 29623173 - 29623242
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgt 72  Q
    |||| |||||||||||||||| || | |||||||||||||||   ||| ||||||||||||||| |||||    
T  29623173 ttttgaaaattaaattttatggaaagataattttgtcattttaaggtgcaaccaggattaaacatggtgt 29623242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 3094671 - 3094611
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  3094671 ttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaa 3094611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 18893758 - 18893698
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||||||||| ||||||    
T  18893758 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaa 18893698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 29122355 - 29122415
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  29122355 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 29122415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 29630497 - 29630557
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  29630497 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 29630557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 7081055 - 7080968
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| ||||| |||||||||  |||| ||||||| ||||||| | |||||||||||| || |||  |||| |||||||||| ||||||    
T  7081055 ttttgaaaatcaaattttatctaaggataattttatcattttggggtgtaaccaggaatatacagtgtgtaattagaaaaattcttaa 7080968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 13445403 - 13445464
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaa 64  Q
    |||| |||||||||||||||  ||| |||||||||||||||| |  || |||||||||||||    
T  13445403 ttttgaaaattaaattttatagaagagtaattttgtcattttaggatgcaaccaggattaaa 13445464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 13889959 - 13890044
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||| ||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  13889959 ttttgaaaatcaaattttatgaaagggtaatcttgttattttggggtgcaaccatgattaattagggtgcaagtagaaaaactctt 13890044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 6167937 - 6167997
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||    
T  6167937 ttttgaaaatcaaattttatgaaaggttaatcttgtcattttagggtgcaaccatgattaa 6167997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Complemental strand, 8011061 - 8011025
Alignment:
Q  98 aacttatgaatatacaattttcattagtatgatctta 134  Q
    |||||||||||||||||||||| |||||| |||||||    
T  8011061 aacttatgaatatacaattttcgttagtaagatctta 8011025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 31793850 - 31793933
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||| ||||| |||||||||||||    
T  31793850 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaactc 31793933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 83
Target Start/End: Complemental strand, 12722639 - 12722559
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| ||||||||||||||| ||||| ||||||||||    
T  12722639 ttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaaacagggtgtaattagaaaaa 12722559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35329725 - 35329813
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    ||||||| ||| | ||||||||| |||| ||||||||||||||| ||||| ||||||||||||||| ||||| ||||||||||||||||    
T  35329725 gctttttgaaaattaattttatggaaggataattttgtcattttggagtgcaaccaggattaaacatggtgtaattagaaaaactctta 35329813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 41942362 - 41942448
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| |||||||||||||||| |||| ||||||||||||||| |  || ||||||||||||||| ||||| ||||||||||||||||    
T  41942362 ttttgaaaattaaattttatggaaggataattttgtcattttgggatgcaaccaggattaaacagggtgtaattagaaaaactctta 41942448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 38945771 - 38945688
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||| ||||||||||||||| | ||| |||||||||||||||  |||| |||||||||||||    
T  38945771 ttttgaaaattaaattttatggaaggataattttgtcattttagggtgcaaccaggattaaacattgtgtaattagaaaaactc 38945688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 42687942 - 42688025
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| | ||| ||||| |||||||||  |||| |||||||||||||    
T  42687942 ttttaaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaagattaaacagagtgtaattagaaaaactc 42688025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 5347478 - 5347560
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| ||| ||||||||||||||||||||||||| |||||||   ||||||||||||||||||| | ||| ||||||||||||    
T  5347478 ttttgaaacttaaattttatgaaagggtaattttatcattttaaggtgtaaccaggattaaacaggatgtaattagaaaaact 5347560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 4005848 - 4005764
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| ||||||||||||||||||||    |  ||||||||||||||| ||||| ||||||||||||||    
T  4005848 ttttgaaaattaaattttatggaagggtaattttgtcattttaagatacaaccaggattaaacagggtgtaattagaaaaactct 4005764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 36057733 - 36057817
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||| ||||| ||||||||| | ||| |||||| |||||||| ||||| ||||||||||||||    
T  36057733 ttttgaaaattaaattttatggaaggataattctgtcattttggggtgcaaccagaattaaacagggtgtaattagaaaaactct 36057817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 39712762 - 39712697
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaaca 66  Q
    |||||||||||||||||||||||||| | ||||||| ||||||| |  ||||||||||||||||||    
T  39712762 gctttttaaaattaaattttatgaaaagataattttatcattttaggatgtaaccaggattaaaca 39712697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 17601409 - 17601333
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||  ||||||  ||||||||||||||    
T  17601409 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactaaggtgcaattagaaaaactct 17601333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 38234500 - 38234416
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||| | |||||||||||||  |||| || |||||||||| | ||||| ||||||||||||||    
T  38234500 ttttaaaaattaaattttatggaaggatcattttgtcattttgaagtgcaaacaggattaaatagggtgtaattagaaaaactct 38234416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 4229719 - 4229637
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| |||| ||||| |||||||||  | || ||||||||||||||| | ||| ||||||||||||    
T  4229719 ttttgaaaattaaattttatggaaggataattctgtcattttgaaatgcaaccaggattaaacaggatgtaattagaaaaact 4229637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 83
Target Start/End: Original strand, 7970033 - 7970114
Alignment:
Q  2 ctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||||||||| |||||||||||||| ||||||||||||||||| | |||||| ||| | || | | ||||| ||||||||||    
T  7970033 ctttttaaaaataaattttatgaaaaggtaattttgtcattttagggtgtaatcagaaatataaagggtgtaattagaaaaa 7970114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 38168486 - 38168571
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||| |||||||||||| ||||||| ||||| ||||| || |||| |  |||| |||| ||||||||||    
T  38168486 ttttgaaaattaaattttatggaagggtaattttatcattttggagtgcaaccaagaataaaaattgtgtaattaaaaaaactctt 38168571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 8013933 - 8013985
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  8013933 attaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaa 8013985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 37578058 - 37578006
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  37578058 attaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaa 37578006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 38460114 - 38460186
Alignment:
Q  15 aattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    ||||||||  ||||||||||||||||||||   ||| |||||||||||| || ||||| ||||||||||||||    
T  38460114 aattttatagaagggtaattttgtcattttgaggtgcaaccaggattaatcagggtgtaattagaaaaactct 38460186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 2828315 - 2828402
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| ||||||||||| ||||  |  |||||||||||||| |  |||||||| ||||||| ||| ||||| |||||||||||||||||    
T  2828315 ttttgaaaattaaattctatgccaaagtaattttgtcattctaaagtgtaactaggattatacagggtgtaattagaaaaactcttaa 2828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 5599869 - 5599947
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    ||||||||||||||||||||||| |||||||||| || || ||||| ||||||  | ||||  | ||||||||||||||    
T  5599869 attaaattttatgaaagggtaatcttgtcattttggaatgcaaccatgattaactagggtgcaagtagaaaaactctta 5599947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 5640751 - 5640673
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    ||||||||||||||||||||||| |||||||||| || || ||||| ||||||  | ||||  | ||||||||||||||    
T  5640751 attaaattttatgaaagggtaatcttgtcattttggaatgcaaccatgattaactagggtgcaagtagaaaaactctta 5640673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 28885720 - 28885798
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||||    
T  28885720 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctta 28885798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 3137225 - 3137310
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  3137225 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactacggtgcaagtagaaaaactctt 3137310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Complemental strand, 11587973 - 11587896
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  11587973 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaattagggtgcaagtagaaaaactctt 11587896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 5988271 - 5988211
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  5988271 ttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaa 5988211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 8376323 - 8376263
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  8376323 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 8376263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 15839530 - 15839478
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  15839530 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 15839478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 22439606 - 22439666
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| ||||||||||   ||||||||| ||||||    
T  22439606 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttgaggtgtaaccatgattaa 22439666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 24822724 - 24822784
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  24822724 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 24822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 26290779 - 26290839
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  26290779 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 26290839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 26304036 - 26304096
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  26304036 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 26304096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 26337391 - 26337451
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  26337391 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 26337451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 28909737 - 28909685
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  28909737 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 28909685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 35605420 - 35605336
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||| |||||||||||||||||||| ||||||||||   ||| ||||| ||||||  | ||||| | ||||||||||||    
T  35605420 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttgaggtgcaaccatgattaactagggtgtaagtagaaaaactct 35605336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 39365329 - 39365269
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  39365329 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 39365269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 16571248 - 16571291
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||    
T  16571248 gctttttaaaaataaactttatgaaagggtagttttgtcatttt 16571291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 2669717 - 2669770
Alignment:
Q  98 aacttatgaatatacaattttcattagtatgatcttaatgatctaacataaaagc 152  Q
    |||||||||||||||| |||||||||||| |||||| ||||  ||||||||||||    
T  2669717 aacttatgaatatacatttttcattagtaggatctt-atgaattaacataaaagc 2669770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 11266216 - 11266134
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||  ||| ||||| || |||||||   ||| |||||||||||||||| |||| |||| |||||||    
T  11266216 ttttgaaaattaaattttatagaagagtaatcttatcattttgaggtgcaaccaggattaaacaaagtgtaattaaaaaaact 11266134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 5593 - 5552
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| |||||||||||||||| |||| |||||||||||||||    
T  5593 ttttgaaaattaaattttatggaaggataattttgtcatttt 5552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 2563427 - 2563491
Alignment:
Q  98 aacttatgaatatacaattttcattagtatgatcttaatgatctaacataaaagcattactatttg 163  Q
    ||||| ||||||||||||||| ||||||| |||||| ||||  |||||||||||||| | ||||||    
T  2563427 aacttttgaatatacaatttttattagtaagatctt-atgaattaacataaaagcataattatttg 2563491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 3032898 - 3032983
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||| ||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  3032898 ttttgaaaatcaaatgttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 3032983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 17122173 - 17122088
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||| ||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  17122173 ttttgaaaatcaaattttatgaaagggtaatcttgttattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 17122088  T

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Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 26122526 - 26122611
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| || ||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  26122526 ttttgaaaatcaaattttatgaaagggtaatcttatcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 26122611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 34917621 - 34917580
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  34917621 ttttgaaaatcaaattttatgaaagggtaatcttgtcatttt 34917580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 42512242 - 42512201
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  42512242 ttttgaaaatcaaattttatgaaagggtaatcttgtcatttt 42512201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 43664325 - 43664366
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  43664325 ttttgaaaatcaaattttatgaaagggtaatcttgtcatttt 43664366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 8656637 - 8656577
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| ||||||||||||  || ||||| ||||||    
T  8656637 ttttgaaaatcaaattttatgaaaggttaatcttgtcatttttggttgcaaccatgattaa 8656577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 9782252 - 9782288
Alignment:
Q  98 aacttatgaatatacaattttcattagtatgatctta 134  Q
    |||||||||||||||||||||| |||||| |||||||    
T  9782252 aacttatgaatatacaattttcgttagtaagatctta 9782288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 23357257 - 23357317
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||| |||||| |||||||||| | ||| ||||| ||||||    
T  23357257 ttttgaaaatcaaattttatgaaaaggtaatcttgtcattttggggtgcaaccatgattaa 23357317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 4e-23; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 12847175 - 12847258
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||| ||||||| ||||| ||||||||||||||| ||||| |||||||||||||    
T  12847175 ttttgaaaattaaattttatggaagggtaattttatcattttggagtgcaaccaggattaaacagggtgtaattagaaaaactc 12847258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 19474021 - 19473937
Alignment:
Q  2 ctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    ||||||||||||||||||||||||||| |||||| |||||||| |||||||| ||  |||||||| ||||||||||||||||||||    
T  19474021 ctttttaaaattaaattttatgaaaggataattt-gtcattttagagtgtaatcaaaattaaacagggtgtgattagaaaaactct 19473937  T

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Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 24980938 - 24980853
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||| |||| ||||||||||||||| | ||| ||||||||||||||| ||||| |||||||||||||||    
T  24980938 ttttgaaaattaaattttatggaaggataattttgtcattttagggtgcaaccaggattaaacagggtgtaattagaaaaactctt 24980853  T

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Target: chr7; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 20492769 - 20492682
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||||| |||||||||||||||| |||||||||||||||||||| | ||| |||||||||||| || ||||| |||| ||||||||||    
T  20492769 gcttttgaaaattaaattttatggaagggtaattttgtcattttggggtgcaaccaggattaatcagggtgtaattataaaaactctt 20492682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 25764948 - 25764870
Alignment:
Q  12 ttaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||||||||||| ||||||||||||||||||||   ||||||||||||||| ||| ||||| |||||||||||||||||    
T  25764948 ttaaattttatgcaagggtaattttgtcattttgaggtgtaaccaggattatacatggtgtaattagaaaaactcttaa 25764870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 40305474 - 40305557
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||||||||||||| ||||||||||||||||||||||||  ||| |||||| |||||||| | ||| |||||||||||||    
T  40305474 ttttgaaaattaaattttttgaaagggtaattttgtcatttttaggtgcaaccagaattaaacaggatgtaattagaaaaactc 40305557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 43775966 - 43775880
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| | ||| ||||||||||||| | | ||| ||||||||||||||||    
T  43775966 ttttgaaaattaaattttatgaaaggataattttatcattttggggtgcaaccaggattaaataggatgtaattagaaaaactctta 43775880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 40862442 - 40862357
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||||||||||||||||||| ||||||||||||||| | ||| || |||||||||||| | | | |||||||||||||||    
T  40862442 ttttgaaaattaaattttatgaaaggataattttgtcattttagggtgcaatcaggattaaacaggatataattagaaaaactctt 40862357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 45870170 - 45870255
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||| |||| |||||||||||||||   ||| |||||| |||||||| ||||| |||||||||||||||    
T  45870170 ttttgaaaattaaattttatggaaggataattttgtcattttgaggtgcaaccagaattaaacatggtgtaattagaaaaactctt 45870255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 10594167 - 10594083
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||| ||||| ||| ||||| | ||| ||||||||||||||| ||||| ||||||||||||||    
T  10594167 ttttaaaaattaaattttatggaaggttaattctgttattttggggtgcaaccaggattaaacagggtgtaattagaaaaactct 10594083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 29042215 - 29042143
Alignment:
Q  15 aattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||||||||||||| |||||||||||||||   ||| ||| ||||||||||||||||| ||||||||||||||    
T  29042215 aattttatgaaaggataattttgtcattttgaggtgcaactaggattaaacaaggtgtaattagaaaaactct 29042143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 39597870 - 39597950
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    |||| ||||||||||||||||| ||| ||||||||||||||| | ||| ||||||||||||||| |||||  |||||||||    
T  39597870 ttttgaaaattaaattttatgacaggataattttgtcattttggggtgcaaccaggattaaacagggtgtatttagaaaaa 39597950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 47540373 - 47540290
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| || | ||||||| |||||||| ||||||| ||| |||||||| ||||| |||||||||||||    
T  47540373 ttttgaaaattaaattttatggaatgataattttatcatttttaagtgtaatcagaattaaacagggtgtaattagaaaaactc 47540290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 47546930 - 47546847
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| || | ||||||| |||||||| ||||||| ||| |||||||| ||||| |||||||||||||    
T  47546930 ttttgaaaattaaattttatggaatgataattttatcatttttaagtgtaatcagaattaaacagggtgtaattagaaaaactc 47546847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 12428682 - 12428596
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| |||||||||||| ||| |||| |||||||||||||||  | || ||||||||||||| || |||| ||||||||||||||||    
T  12428682 ttttaaaaattaaatttgatggaaggataattttgtcattttaaaatgcaaccaggattaaaaaaagtgtaattagaaaaactctta 12428596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 7883674 - 7883761
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttt-tgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    ||||||| ||| | |||||||||||||||||||||| |||||||  | ||| ||||||||||||||| | ||| ||||||||||||||    
T  7883674 gctttttgaaaattaattttatgaaagggtaattttttcattttgggggtgcaaccaggattaaacatgatgtaattagaaaaactct 7883761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 8203438 - 8203521
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||||| |||||||||||||||||||| |||||||||| ||||| ||||| ||||||  ||||||  | |||||||||||    
T  8203438 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactaaggtgcaagtagaaaaactc 8203521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 8215915 - 8215998
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||||| |||||||||||||||||||| |||||||||| ||||| ||||| ||||||  ||||||  | |||||||||||    
T  8215915 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaactaaggtgcaagtagaaaaactc 8215998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 38876051 - 38876139
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaat 91  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||||||    
T  38876051 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcttaat 38876139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 42436505 - 42436588
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||| ||||||||||| ||||||||| |||||||||| | ||| | ||||||||||||| ||| | |||| ||||||||    
T  42436505 ttttgaaaactaaattttatggaagggtaatcttgtcattttggggtgcagccaggattaaacagggtataattataaaaactc 42436588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 48612944 - 48612861
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||| ||||||| |||||||   |||||||||| ||||||||  || | |||||||||||||    
T  48612944 ttttaaaaattaaattttatggaaggataattttatcattttaaggtgtaaccagaattaaacagagtctaattagaaaaactc 48612861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 26015863 - 26015948
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  26015863 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 26015948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 30173463 - 30173548
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||  || |||||||||||||||||  | || ||||| ||||||| | ||| | |||||||||||||||    
T  30173463 ttttgaaaattaaattttatagaaaggtaattttgtcattttgaaatgcaaccaagattaaatagggtataattagaaaaactctt 30173548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 39074361 - 39074438
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  39074361 attaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactctt 39074438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 43246954 - 43247039
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  43246954 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaactagaaaaactctt 43247039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 7790986 - 7790926
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  7790986 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 7790926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 7900516 - 7900456
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  7900516 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 7900456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 25066568 - 25066648
Alignment:
Q  8 aaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    ||||||||||||||  ||||| ||||||||||||||| | ||||||| || |||||| | ||||| | |||||||| ||||    
T  25066568 aaaattaaattttactaaaggataattttgtcattttagggtgtaacaagaattaaatagggtgtaactagaaaaattctt 25066648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 32542180 - 32542240
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  32542180 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 32542240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 35924313 - 35924253
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  35924313 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 35924253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 38283588 - 38283648
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  38283588 ttttgaaaatcaaattttatgaaagggtaatattgtcattttggggtgcaaccatgattaa 38283648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 42095779 - 42095831
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  42095779 attaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 42095831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 43047091 - 43047143
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  43047091 attaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaa 43047143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 46322043 - 46322103
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  46322043 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 46322103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 46923961 - 46923901
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  46923961 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 46923901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 47065937 - 47065997
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  47065937 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 47065997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 47779506 - 47779566
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  47779506 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 47779566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36688734 - 36688820
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgag-tgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    ||||||| ||| | ||||||||| |||| ||||||||||| ||||||| || ||| ||||||||| | ||||| ||||||||||||||    
T  36688734 gctttttgaaaattaattttatggaaggataattttgtca-ttttgagatgcaacaaggattaaagagggtgtaattagaaaaactct 36688820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 46101887 - 46101804
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||  || | |||||||||||||||  |||| || ||||||||| || ||||| |||| ||||||||    
T  46101887 ttttgaaaattaaattttatagaaagataattttgtcattttaaagtgcaatcaggattaagcagggtgtaattaaaaaaactc 46101804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48642020 - 48641965
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaacca 56  Q
    ||||||||||| |||||| |||||||| ||||||||||| |||| | |||||||||    
T  48642020 gctttttaaaaataaattctatgaaagagtaattttgtcgttttggggtgtaacca 48641965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 241767 - 241685
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaa 83  Q
    ||||||| ||| | ||||||||| |||||||||||| |||||||   ||| || || ||||||||| ||||| ||||||||||    
T  241767 gctttttgaaaattaattttatggaagggtaattttatcattttaaggtgcaagcatgattaaacagggtgtaattagaaaaa 241685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 21279066 - 21279156
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaataa 93  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||| ||||    
T  21279066 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactcttcataa 21279156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 89
Target Start/End: Original strand, 32662365 - 32662451
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||| ||||||||||||| |||||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||||    
T  32662365 ttttgaaaatcaaattttatgaaaaggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctta 32662451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 25225600 - 25225512
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaat 91  Q
    |||| |||||||||||||||  || | |||| ||||||||||  |||| ||||| |||||||||  || | || |||||||||||||||    
T  25225600 ttttgaaaattaaattttatagaaagataatattgtcattttaaagtgcaaccaagattaaacagcgtataataagaaaaactcttaat 25225512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 34591759 - 34591671
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaat 91  Q
    |||| ||||| ||||||||||||||| |||| ||||||||||   ||| ||||| ||||||  | ||||  | ||||||||||||||||    
T  34591759 ttttgaaaatcaaattttatgaaaggataatcttgtcattttgaggtgcaaccatgattaactagggtgcaagtagaaaaactcttaat 34591671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 39598531 - 39598615
Alignment:
Q  2 ctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||||| ||| | ||||||||| || ||||| ||| |||||||  |||  |||||| |||||||| ||||| |||||||||||||    
T  39598531 ctttttgaaaattaattttatggaaaggtaaatttatcattttaaagtacaaccagaattaaacagggtgtaattagaaaaactc 39598615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 40705509 - 40705569
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||| ||| |||||||||| | ||| ||||| ||||||    
T  40705509 ttttgaaaatcaaattttatgaaagggcaatcttgtcattttggggtgcaaccatgattaa 40705569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 13480551 - 13480638
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| |||||||||||||||||||||||||||||||||||||   ||| || |||||||||||| ||||| |||||||||||||||||    
T  13480551 ttttgaaaattaaattttatgaaagggtaattttgtcattttaaggtgcaatcaggattaaacatggtgtaattagaaaaactcttaa 13480638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 40659235 - 40659322
Alignment:
Q  1 gctttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||||||||||||||||||||| ||||||||||||| |||||||  ||||||||||  |||||||| |||||||||||||||| ||||    
T  40659235 gctttttaaaattaaattttataaaagggtaattttttcattttaaagtgtaaccataattaaacatggtgtgattagaaaaattctt 40659322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 4331883 - 4331967
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| ||||||||||||||||||||||||||||||||||||| |  || ||||||||||||| | ||||| ||||||||||||||    
T  4331883 ttttgaaaattaaattttatgaaagggtaattttgtcattttaggatgcaaccaggattaaagagggtgtaattagaaaaactct 4331967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 44798892 - 44798809
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||| ||||| |||| ||||||||    
T  44798892 ttttgaaacttaaattttatgaaagagtaattttgtcattttgaagtgtaaccaggattaaacagggtgtaattaaaaaaactc 44798809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 45443557 - 45443640
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||||||||||||||||||||||||||||| |||||||   |||||| |||||||||||| ||||| |||||||||||||    
T  45443557 ttttgaaaattaaattttatgaaagggtaattttatcattttgaggtgtaatcaggattaaacatggtgtaattagaaaaactc 45443640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 3 - 87
Target Start/End: Complemental strand, 26171059 - 26170975
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactct 87  Q
    |||| |||||||||||||||| |||||||||||||| ||||| | ||| ||||| ||||||||| ||||| ||||||||||||||    
T  26171059 ttttgaaaattaaattttatggaagggtaattttgttattttggggtgcaaccaagattaaacagggtgtaattagaaaaactct 26170975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 7722681 - 7722760
Alignment:
Q  9 aaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    ||||||||||||||| |||||||||||| |||||||   ||| |||||| |||||||| ||||| |||||||||||||||    
T  7722681 aaattaaattttatggaagggtaattttatcattttgaggtgcaaccagaattaaacagggtgtaattagaaaaactctt 7722760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 86
Target Start/End: Original strand, 38629411 - 38629494
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| ||||||||||||||||||||| ||||||| ||||||| |  || ||||||||||||| | ||||| |||||||||||||    
T  38629411 ttttgaaaattaaattttatgaaaggataattttatcattttaggatgcaaccaggattaaagagggtgtaattagaaaaactc 38629494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 44456814 - 44456899
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaat 91  Q
    |||| ||||||||||||||||||||||||||||| ||||||| |  || ||||| |||||||||  |||| ||||||||||||||||||    
T  44456814 ttttgaaaattaaattttatgaaagggtaattttatcattttaggatgcaacca-gattaaaca--gtgtaattagaaaaactcttaat 44456899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 5109197 - 5109256
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggatta 62  Q
    |||| |||||||||||||||| |||  ||||||||||||||| |||||||||||||||||    
T  5109197 ttttgaaaattaaattttatgtaagaataattttgtcattttagagtgtaaccaggatta 5109256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 458611 - 458701
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaataa 93  Q
    |||| |||||||||||||||  || | ||||||| ||||||| |  || |||||||||||||||  |||| ||||||||||||||||||||    
T  458611 ttttgaaaattaaattttatagaatgataattttatcattttaggatgcaaccaggattaaacagagtgtaattagaaaaactcttaataa 458701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 45505787 - 45505872
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| |||||||||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  45505787 ttttgaaaattaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 45505872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 927147 - 927062
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  927147 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 927062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 15011902 - 15011817
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  15011902 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctt 15011817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 34202362 - 34202277
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||||||||| ||||||  | ||||  | |||||||||||||    
T  34202362 ttttgaaaatcaaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaactagggtgcaagtagaaaaactctt 34202277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 1481894 - 1481834
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  1481894 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 1481834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 10638861 - 10638801
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  10638861 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaa 10638801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 13196139 - 13196199
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  13196139 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 13196199  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 25853434 - 25853494
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  25853434 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 25853494  T

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Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 27980921 - 27980973
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||||||||||||||||| |||| |||||||||| | ||||||||| ||||||    
T  27980921 attaaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaa 27980973  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 28067451 - 28067503
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||||||||||||||||| |||| |||||||||| | ||||||||| ||||||    
T  28067451 attaaattttatgaaaggataatcttgtcattttggggtgtaaccatgattaa 28067503  T

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Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 35895563 - 35895515
Alignment:
Q  15 aattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  35895563 aattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaa 35895515  T

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Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 43577086 - 43577026
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  43577086 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaa 43577026  T

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Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 44143443 - 44143383
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  44143443 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 44143383  T

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Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 31569661 - 31569711
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaa 53  Q
    |||| |||||||||||||||| |||| ||||||||||||||| | ||||||    
T  31569661 ttttgaaaattaaattttatggaaggataattttgtcattttagggtgtaa 31569711  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 39697779 - 39697820
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttt 44  Q
    |||| ||||| |||||||||||||||||||| ||||||||||    
T  39697779 ttttgaaaatcaaattttatgaaagggtaatcttgtcatttt 39697820  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 1520259 - 1520199
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| || ||||||| | ||| ||||| ||||||    
T  1520259 ttttgaaaatcaaattttatgaaagggtaatcttatcattttggggtgcaaccatgattaa 1520199  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 2390688 - 2390748
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||    
T  2390688 ttttgaaaatcaaattttatgaaaggataatcttgtcattttagggtgcaaccatgattaa 2390748  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 3178309 - 3178249
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| || ||||||| | ||| ||||| ||||||    
T  3178309 ttttgaaaatcaaattttatgaaagggtaatcttatcattttagggtgcaaccatgattaa 3178249  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 21658010 - 21657950
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| ||||||||||||||| |||| |||||||||| | ||| ||||| ||||||    
T  21658010 ttttgaaaatcaaattttatgaaaggataatcttgtcattttagggtgcaaccatgattaa 21657950  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 32551681 - 32551729
Alignment:
Q  15 aattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  32551681 aattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 32551729  T

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Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 200116 - 200033
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactc 86  Q
    |||| |||||||||||||||| |||||||||||||||||||| |  || | ||||||||||||| | ||| |||| ||||||||    
T  200116 ttttgaaaattaaattttatggaagggtaattttgtcattttgggatgcatccaggattaaacaggatgtaattaaaaaaactc 200033  T

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Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 157116 - 157176
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||||  ||| ||||| ||||||    
T  157116 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttttggtgcaaccatgattaa 157176  T

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Target: scaffold0578 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 85
Target Start/End: Complemental strand, 8801 - 8719
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaact 85  Q
    |||| |||||||||||||||| ||| |||||||||| |||||    || ||||||||||||||| ||||| ||||||||||||    
T  8801 ttttgaaaattaaattttatggaagagtaattttgttattttaagatgcaaccaggattaaacagggtgtaattagaaaaact 8719  T

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Target: scaffold0065 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 38421 - 38473
Alignment:
Q  11 attaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    ||||||||||||||||||||||| |||||||||| ||||| ||||| ||||||    
T  38421 attaaattttatgaaagggtaatcttgtcattttggagtgcaaccatgattaa 38473  T

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Target: scaffold0896 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 3751 - 3838
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactcttaa 90  Q
    |||| ||||| |||||||||| |||| ||||||| ||||||| | |||||||||||| || ||  ||||| |||||||||| ||||||    
T  3751 ttttcaaaatcaaattttatgtaaggataattttatcattttggggtgtaaccaggaatatacggggtgtaattagaaaaattcttaa 3838  T

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Target: scaffold0391 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 3958 - 3872
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctta 89  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | ||||||||||||||    
T  3958 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaactagggtgcaagtagaaaaactctta 3872  T

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Target: scaffold0368 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 13945 - 13860
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaaacaaggtgtgattagaaaaactctt 88  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||  | ||||  | |||||||||||||    
T  13945 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttagggtgcaaccatgattaactagggtgcaagtagaaaaactctt 13860  T

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Target: scaffold0438 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 2116 - 2176
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  2116 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 2176  T

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Target: scaffold0276 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 12603 - 12543
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcatttttgagtgtaaccaggattaa 63  Q
    |||| ||||| |||||||||||||||||||| |||||||||| | ||| ||||| ||||||    
T  12603 ttttgaaaatcaaattttatgaaagggtaatcttgtcattttggggtgcaaccatgattaa 12543  T

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Target: scaffold0294 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 12592 - 12554
Alignment:
Q  3 tttttaaaattaaattttatgaaagggtaattttgtcat 41  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  12592 ttttaaaaattaaattttatgaaaaggtaattttgtcat 12554  T

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Target: scaffold0004 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 227778 - 227829
Alignment:
Q  100 cttatgaatatacaattttcattagtatgatcttaatgatctaacataaaagc 152  Q
    |||||||||||||||||||| |||||| |||||| ||||  ||||||||||||    
T  227778 cttatgaatatacaattttcgttagtaagatctt-atgaattaacataaaagc 227829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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