View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11396_high_40 (Length: 247)
Name: NF11396_high_40
Description: NF11396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11396_high_40 |
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Alignment Details
Target: chr5 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 13 - 230
Target Start/End: Original strand, 32551655 - 32551872
Alignment:
| Q |
13 |
gagaagaatcagactcggaagccgtagaaatggaactagaaagctctatataccataacagaaaagcgataaagctatagaaacttgagagattgtgtat |
112 |
Q |
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| T |
32551655 |
gagaagaatcagactcggaagccgtagaaatggaactagaaagctctatataccataacagaaaagcgataaagctatagaaacttgagagattgtgtat |
32551754 |
T |
|
| Q |
113 |
tcatctctgaaatttgttgagatttgttatcaatagaaagttagttacatgaaagactaggaaaggctatctacagcaacacctaactgcggtgacacag |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32551755 |
tcatctctgaaatttgttgagatttgttatcaatagaaagttagttacatgaaagactaggaaaggctatctacagcaacacctaactgcggtgacacag |
32551854 |
T |
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| Q |
213 |
ttagttatagttcttact |
230 |
Q |
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|||||||||||||||||| |
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| T |
32551855 |
ttagttatagttcttact |
32551872 |
T |
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