View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11396_high_43 (Length: 239)
Name: NF11396_high_43
Description: NF11396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11396_high_43 |
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Alignment Details
Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 10931457 - 10931651
Alignment:
| Q |
29 |
agatgtgtataaatatgacgtattattgactaagaatttctaaggataaggacactgtacataaccaatactaactaccacaaaaatatatacacataag |
128 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10931457 |
agatgtgtataaatatgacgtattattgactaagaatttctaaggataaggacactgtacataaccaatactaactaccacaaaaatatatacacataag |
10931556 |
T |
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| Q |
129 |
agtgatgcagacccatacataatcccattcttcccatcacattataaattcactagagagaaacacttcccttaccaattaattctccaacctct |
223 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
10931557 |
agtgatgcagacccatacataatcccattcttctcatcacattataaattcaccagagagaaacacttcccttaccaattaattctccaacctct |
10931651 |
T |
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