View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11396_low_33 (Length: 296)

Name: NF11396_low_33
Description: NF11396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11396_low_33
NF11396_low_33
[»] chr8 (45 HSPs)
chr8 (1-200)||(35434153-35434352)
chr8 (28-234)||(30576510-30576725)
chr8 (13-243)||(13771704-13771941)
chr8 (162-234)||(11113618-11113690)
chr8 (11-200)||(5358693-5358882)
chr8 (40-197)||(44041150-44041307)
chr8 (28-228)||(14871207-14871406)
chr8 (27-234)||(6236087-6236294)
chr8 (166-244)||(23179044-23179122)
chr8 (90-200)||(30576262-30576372)
chr8 (24-234)||(16197096-16197314)
chr8 (162-237)||(9770770-9770854)
chr8 (90-237)||(25730035-25730191)
chr8 (194-241)||(9277069-9277116)
chr8 (194-243)||(29794343-29794392)
chr8 (162-234)||(40553232-40553304)
chr8 (191-234)||(9770679-9770722)
chr8 (195-234)||(36359968-36360007)
chr8 (194-245)||(36360160-36360211)
chr8 (176-234)||(9770628-9770686)
chr8 (90-200)||(13771468-13771578)
chr8 (28-114)||(14871109-14871195)
chr8 (90-200)||(25737521-25737631)
chr8 (89-183)||(35433964-35434058)
chr8 (194-243)||(45017745-45017794)
chr8 (191-243)||(8713844-8713896)
chr8 (191-239)||(9277006-9277054)
chr8 (194-234)||(36359908-36359948)
chr8 (191-242)||(8714436-8714487)
chr8 (195-242)||(31169570-31169617)
chr8 (191-234)||(39701475-39701518)
chr8 (162-200)||(9276593-9276631)
chr8 (162-200)||(16208674-16208712)
chr8 (195-241)||(16208776-16208822)
chr8 (195-241)||(25730210-25730256)
chr8 (191-237)||(43422982-43423028)
chr8 (191-237)||(45017811-45017857)
chr8 (194-243)||(9770871-9770920)
chr8 (99-200)||(39700995-39701096)
chr8 (191-243)||(5358641-5358693)
chr8 (126-242)||(5359018-5359134)
chr8 (33-113)||(23179160-23179240)
chr8 (191-239)||(25737166-25737214)
chr8 (194-234)||(29792603-29792643)
chr8 (199-243)||(30576150-30576194)
[»] chr1 (24 HSPs)
chr1 (23-234)||(49650641-49650852)
chr1 (127-234)||(4772586-4772693)
chr1 (162-239)||(49650985-49651062)
chr1 (164-234)||(4772179-4772249)
chr1 (164-234)||(10685916-10685986)
chr1 (11-119)||(2965754-2965861)
chr1 (156-234)||(27351513-27351591)
chr1 (89-237)||(8902826-8902983)
chr1 (27-200)||(34254610-34254782)
chr1 (191-237)||(1765881-1765927)
chr1 (126-200)||(10686653-10686727)
chr1 (162-200)||(48352311-48352349)
chr1 (191-233)||(48352755-48352797)
chr1 (33-234)||(4030599-4030800)
chr1 (194-243)||(11897841-11897890)
chr1 (191-239)||(34254562-34254610)
chr1 (195-239)||(44964091-44964135)
chr1 (191-234)||(27351119-27351162)
chr1 (194-243)||(10686790-10686839)
chr1 (197-234)||(11897910-11897947)
chr1 (28-193)||(29418886-29419051)
chr1 (194-243)||(48352818-48352867)
chr1 (194-234)||(10685856-10685896)
chr1 (194-234)||(27351059-27351099)
[»] chr6 (25 HSPs)
chr6 (13-233)||(28630452-28630672)
chr6 (11-197)||(24139333-24139518)
chr6 (162-237)||(16168530-16168605)
chr6 (13-200)||(10407568-10407755)
chr6 (24-234)||(11527604-11527814)
chr6 (162-234)||(2839693-2839765)
chr6 (162-237)||(9946689-9946764)
chr6 (162-239)||(2840036-2840113)
chr6 (191-234)||(20575610-20575653)
chr6 (27-135)||(10962914-10963022)
chr6 (89-200)||(9902010-9902121)
chr6 (195-234)||(10862665-10862704)
chr6 (191-234)||(32417597-32417640)
chr6 (191-234)||(32423438-32423481)
chr6 (162-200)||(10862562-10862600)
chr6 (176-234)||(20575646-20575703)
chr6 (162-200)||(32417688-32417726)
chr6 (162-200)||(32423529-32423567)
chr6 (189-234)||(9902276-9902321)
chr6 (194-243)||(16168767-16168816)
chr6 (194-243)||(32417468-32417517)
chr6 (194-243)||(32417789-32417838)
chr6 (194-243)||(32423309-32423358)
chr6 (194-243)||(32423630-32423679)
chr6 (194-234)||(20575420-20575460)
[»] chr3 (12 HSPs)
chr3 (24-243)||(35555820-35556039)
chr3 (38-211)||(33974948-33975120)
chr3 (162-239)||(4276600-4276677)
chr3 (162-234)||(14629293-14629365)
chr3 (13-183)||(21410134-21410302)
chr3 (90-200)||(31247547-31247657)
chr3 (162-234)||(3088077-3088149)
chr3 (162-205)||(21376994-21377037)
chr3 (162-237)||(50530311-50530385)
chr3 (194-243)||(31247720-31247769)
chr3 (164-200)||(31247237-31247273)
chr3 (191-243)||(50530245-50530297)
[»] chr4 (36 HSPs)
chr4 (94-234)||(44916227-44916367)
chr4 (21-243)||(2508261-2508490)
chr4 (24-200)||(42115683-42115859)
chr4 (162-234)||(52183408-52183480)
chr4 (171-234)||(52866347-52866410)
chr4 (191-238)||(5387190-5387237)
chr4 (12-142)||(42115894-42116023)
chr4 (191-234)||(52181783-52181826)
chr4 (191-237)||(43098365-43098411)
chr4 (164-234)||(19631831-19631905)
chr4 (191-236)||(35046560-35046605)
chr4 (191-239)||(26330020-26330068)
chr4 (162-234)||(30543112-30543184)
chr4 (162-234)||(52866024-52866096)
chr4 (191-234)||(26329831-26329874)
chr4 (191-234)||(43098425-43098468)
chr4 (191-237)||(2788928-2788974)
chr4 (191-237)||(2788988-2789034)
chr4 (11-200)||(8408686-8408873)
chr4 (162-200)||(22025164-22025202)
chr4 (196-234)||(22025319-22025357)
chr4 (162-200)||(31229366-31229404)
chr4 (162-200)||(43098289-43098327)
chr4 (14-183)||(44915966-44916134)
chr4 (191-239)||(35046491-35046539)
chr4 (207-243)||(41735966-41736002)
chr4 (191-234)||(26329960-26330003)
chr4 (195-234)||(26330084-26330123)
chr4 (191-234)||(41735820-41735863)
chr4 (11-237)||(52568023-52568254)
chr4 (195-234)||(52865964-52866003)
chr4 (126-200)||(2508634-2508708)
chr4 (176-234)||(8408359-8408417)
chr4 (11-69)||(31229592-31229650)
chr4 (194-243)||(8408936-8408985)
chr4 (191-243)||(42116081-42116133)
[»] chr7 (50 HSPs)
chr7 (24-234)||(5559465-5559674)
chr7 (11-200)||(1286481-1286668)
chr7 (162-237)||(1441417-1441492)
chr7 (162-237)||(31893315-31893390)
chr7 (162-233)||(36566497-36566568)
chr7 (162-237)||(39958752-39958827)
chr7 (176-234)||(31893474-31893532)
chr7 (162-239)||(8040131-8040207)
chr7 (165-234)||(10620213-10620282)
chr7 (162-237)||(28256921-28256996)
chr7 (90-237)||(42990921-42991067)
chr7 (90-234)||(35214875-35215028)
chr7 (163-234)||(1346548-1346624)
chr7 (191-239)||(19925351-19925399)
chr7 (24-234)||(5805106-5805325)
chr7 (90-200)||(8039757-8039867)
chr7 (191-237)||(21433348-21433394)
chr7 (11-205)||(28104490-28104684)
chr7 (162-239)||(28256556-28256642)
chr7 (191-242)||(1441006-1441057)
chr7 (191-234)||(31175970-31176013)
chr7 (191-234)||(33235102-33235145)
chr7 (176-234)||(10619817-10619875)
chr7 (191-237)||(22876867-22876913)
chr7 (194-243)||(21433143-21433192)
chr7 (194-243)||(33879592-33879641)
chr7 (195-243)||(5559694-5559742)
chr7 (194-234)||(5805046-5805086)
chr7 (207-243)||(20101822-20101858)
chr7 (191-239)||(21412929-21412977)
chr7 (191-239)||(21412989-21413037)
chr7 (191-239)||(27995124-27995172)
chr7 (191-234)||(21433212-21433255)
chr7 (191-242)||(28256493-28256544)
chr7 (191-234)||(31893438-31893481)
chr7 (162-200)||(5559220-5559258)
chr7 (162-200)||(10619911-10619949)
chr7 (162-200)||(34951338-34951376)
chr7 (191-237)||(36566403-36566449)
chr7 (162-200)||(39959169-39959207)
chr7 (194-243)||(1346479-1346528)
chr7 (194-243)||(1441509-1441558)
chr7 (191-235)||(21433287-21433332)
chr7 (194-243)||(34951538-34951587)
chr7 (147-200)||(35215284-35215337)
chr7 (191-234)||(5559115-5559159)
chr7 (24-72)||(10620088-10620136)
chr7 (191-239)||(20366551-20366599)
chr7 (195-243)||(31893553-31893601)
chr7 (199-243)||(33235033-33235077)
[»] chr2 (29 HSPs)
chr2 (24-200)||(36196341-36196517)
chr2 (161-234)||(27893102-27893175)
chr2 (162-228)||(41265229-41265295)
chr2 (162-238)||(20535938-20536014)
chr2 (162-234)||(21813213-21813285)
chr2 (90-234)||(27893464-27893617)
chr2 (11-119)||(42116909-42117017)
chr2 (11-237)||(19080693-19080928)
chr2 (191-237)||(34336099-34336145)
chr2 (58-200)||(15506376-15506518)
chr2 (162-239)||(39376236-39376312)
chr2 (191-234)||(31263992-31264035)
chr2 (191-237)||(37543011-37543057)
chr2 (194-242)||(8260384-8260432)
chr2 (162-234)||(39301808-39301880)
chr2 (191-234)||(30907141-30907184)
chr2 (201-243)||(16781133-16781175)
chr2 (162-200)||(31264134-31264172)
chr2 (191-232)||(11871764-11871805)
chr2 (198-243)||(13315808-13315853)
chr2 (190-243)||(16780937-16780990)
chr2 (194-243)||(27893637-27893686)
chr2 (194-243)||(31263923-31263972)
chr2 (191-228)||(31264058-31264095)
chr2 (208-237)||(37543062-37543091)
chr2 (194-234)||(30907081-30907121)
chr2 (191-239)||(30907196-30907244)
chr2 (194-234)||(34429688-34429728)
chr2 (191-227)||(39376420-39376456)
[»] scaffold0374 (3 HSPs)
scaffold0374 (13-200)||(16434-16620)
scaffold0374 (24-200)||(16224-16398)
scaffold0374 (191-243)||(16072-16124)
[»] scaffold0027 (2 HSPs)
scaffold0027 (24-234)||(9462-9672)
scaffold0027 (194-234)||(9949-9989)
[»] chr5 (30 HSPs)
chr5 (162-239)||(26275567-26275644)
chr5 (162-243)||(26275983-26276064)
chr5 (11-200)||(20728639-20728827)
chr5 (162-237)||(35189978-35190053)
chr5 (58-234)||(38082624-38082800)
chr5 (24-197)||(19278818-19278991)
chr5 (162-234)||(36417954-36418026)
chr5 (191-234)||(18951311-18951354)
chr5 (88-183)||(35890894-35890989)
chr5 (191-237)||(32660324-32660370)
chr5 (189-234)||(31813953-31813998)
chr5 (162-237)||(38405522-38405594)
chr5 (89-197)||(32459757-32459865)
chr5 (191-237)||(6336208-6336254)
chr5 (194-243)||(20728527-20728576)
chr5 (191-243)||(19278704-19278756)
chr5 (191-243)||(35891274-35891326)
chr5 (191-234)||(6336151-6336194)
chr5 (162-200)||(13543577-13543615)
chr5 (90-200)||(18237963-18238073)
chr5 (24-70)||(18238082-18238128)
chr5 (162-200)||(20729019-20729057)
chr5 (162-200)||(35891236-35891274)
chr5 (162-200)||(36418375-36418413)
chr5 (162-203)||(13538572-13538613)
chr5 (194-243)||(38405611-38405660)
chr5 (191-243)||(18238351-18238403)
chr5 (195-239)||(18951366-18951410)
chr5 (191-243)||(32459426-32459478)
chr5 (11-119)||(32459550-32459658)
[»] scaffold0746 (1 HSPs)
scaffold0746 (93-200)||(441-548)
[»] scaffold0070 (1 HSPs)
scaffold0070 (162-234)||(29034-29105)
[»] scaffold0019 (2 HSPs)
scaffold0019 (191-243)||(124142-124194)
scaffold0019 (194-234)||(124373-124413)


Alignment Details
Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 35434153 - 35434352
Alignment:
Q  1 aacaataatcgtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaa 100  Q
    |||||||| |||||||| |||||||||||||||| | ||||| |||||||| ||||| |||||||| ||||||||||||||||  || ||||||||||||    
T  35434153 aacaataaccgtctttcaaaccttataaatgatcttttgtgaccattaaacgcatcgatttgacacactgaagactttaaaacgcagagttttgatccaa 35434252  T
Q  101 gtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||| || ||    ||||||||||||||||||||||  || ||||||||||||    
T  35434253 gtcagcaacttaacggccaaatcggcatcagttaaacggagactgacaacatgggtacctgtgaaatagtttatcaactaaaatgacatatttgaaactt 35434352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 234
Target Start/End: Original strand, 30576510 - 30576725
Alignment:
Q  28 aatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggca 127  Q
    |||||||||||||||  |||||||  | ||||||||||||||| ||  |||||||   | ||||||||||||||||| | |||||||||| | |||| ||    
T  30576510 aatgatcatctgtgacgattaaacgtaacgttttgacaccctggagcttttaaaaggcaatgttttgatccaagtcaacaacttaacggctacatcgaca 30576609  T
Q  128 tcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactta---------tttgaaacttaaaggtctaacttgggaa 218  Q
    ||||||||||||||| |  ||||| || |||   ||||||||||||||||||||||  || ||         ||||||||||||||| ||||||||||||    
T  30576610 tcagttaaacggagactcacaacaggggtaacggtgaaatagtttatcaactaaaatgacatatttaaaacttttgaaacttaaaggactaacttgggaa 30576709  T
Q  219 ttctgtcaaactaaaa 234  Q
    ||||||||||||||||    
T  30576710 ttctgtcaaactaaaa 30576725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 13771704 - 13771941
Alignment:
Q  13 ctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgactta 112  Q
    ||||||| |||||||||||||||| | ||| |||||||| || | ||||||||||||| || |||||||||  ||||||||||||| ||| ||| |||||    
T  13771704 ctttctagccttataaatgatcatttttgaccattaaacgcaacattttgacaccctggaggctttaaaac--agtgttttgatcctagttagcaactta 13771801  T
Q  113 acggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactta---------tttgaaacttaaa 203  Q
    || | || ||| |||||||||||||| ||| ||||   || | ||| | |||||| ||||||||| |||||  || ||         |||||||||||||    
T  13771802 acagtcacatcagcatcagttaaacgaagagtggcggtaaaggtaacagtgaaatggtttatcaaataaaatgacatatttgaaacttttgaaacttaaa 13771901  T
Q  204 ggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    || |||||||||||||| |||||||||||||||| |||||    
T  13771902 ggactaacttgggaattatgtcaaactaaaatgaccaaaa 13771941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 11113690 - 11113618
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  11113690 tgaaatagtttatcaactaaaataacttatttgaaacttaaaggactaacttggaaattctgtcaaactaaaa 11113618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 5358882 - 5358693
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    |||||| || || ||||||||||| | ||||| || ||||| ||||||||||||  ||| ||  |||| ||||  | ||||||||||||||||||| |||    
T  5358882 gtctttttagccgtataaatgatcttttgtgagcactaaacgcatcgttttgactacctaaaacctttgaaacacattgttttgatccaagtcagcaact 5358783  T
Q  111 taacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
     |||| ||| ||  ||||||||||||||||||||| || || || ||| |  |||||||||||||||||||||| || ||||| ||||||    
T  5358782 caacgcccatattagcatcagttaaacggagattgacagcaggggtaacagcgaaatagtttatcaactaaaaggacctatttaaaactt 5358693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 197
Target Start/End: Original strand, 44041150 - 44041307
Alignment:
Q  40 tgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacgg 139  Q
    ||||||||||||  | ||||||||||||||||||  |||||||  |||  ||||||||||||||| | ||||||| |  | ||| |||| ||||||||||    
T  44041150 tgatcattaaacgtagcgttttgacaccctgaagcttttaaaaggtagcattttgatccaagtcaactacttaacagttacatcagcataagttaaacgg 44041249  T
Q  140 agattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaa 197  Q
    |||||| || || || ||||  ||||||||||||||||||||||  ||||||||||||    
T  44041250 agattgacatcatgggtaatggtgaaatagtttatcaactaaaatgacttatttgaaa 44041307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 228
Target Start/End: Original strand, 14871207 - 14871406
Alignment:
Q  28 aatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggca 127  Q
    ||||||||| ||||| ||||||||  |  |||| ||||||||||||  |||||||   |  |||||||||||||||| | |||||||| | | ||| |||    
T  14871207 aatgatcatttgtgaccattaaacgtagagtttcgacaccctgaagcttttaaaaggcatcgttttgatccaagtcaacaacttaacgactacatcagca 14871306  T
Q  128 tcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaa 227  Q
    ||| ||||||||||| || || || ||  |  ||| ||||||||||||||||||||| || ||||||||||||||||| |||| ||| ||||| ||||||    
T  14871307 tcaattaaacggagactgacagcagggtaacgatt-aaatagtttatcaactaaaaggacctatttgaaacttaaaggactaatttgagaattatgtcaa 14871405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 6236087 - 6236294
Alignment:
Q  27 aaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggc 126  Q
    |||||||| | ||||| ||||||||  | | |||||||||||||||   |||||||   || ||||||||| |||||| | ||||||||   | ||| ||    
T  6236087 aaatgatcgtttgtgaccattaaacgtagcattttgacaccctgaaacatttaaaagacagcgttttgatctaagtcaacaacttaacgataacatcagc 6236186  T
Q  127 atcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtca 226  Q
    ||||||||||| ||||||| || || || |||   ||||||||||| |||| |||||  || ||||||||||||||||  |||||||||||| |||||||    
T  6236187 atcagttaaaccgagattgacatcatgggtaaagatgaaatagtttttcaattaaaatgacctatttgaaacttaaagtactaacttgggaagtctgtca 6236286  T
Q  227 aactaaaa 234  Q
    || |||||    
T  6236287 aattaaaa 6236294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 23179122 - 23179044
Alignment:
Q  166 atagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaat 244  Q
    ||||||||||||||||||  || || |||||||||||||| |||||||||||||||||||||||||||| || ||||||    
T  23179122 atagtttatcaactaaaacgacctacttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggaccaaaat 23179044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 30576372 - 30576262
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    ||||||| ||||||| | |||||||||| | |||  ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||||||  ||      
T  30576372 ttttgattcaagtcaacaacttaacggctacatcaacatcagttaaacggagactgacaacaagggtaatagtgaaatagtttatcaactaaaaagacca 30576273  T
Q  190 atttgaaactt 200  Q
    |||||||||||    
T  30576272 atttgaaactt 30576262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 16197314 - 16197096
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    ||||||||||||| ||||| ||||||| | | |||||||||||| |||||  |||||||   | | ||||||||||||||| | | ||||| || | |||    
T  16197314 tataaatgatcatttgtgaccattaaata-agcgttttgacaccttgaagcttttaaaaggcaatattttgatccaagtcaacaatttaacagctagatc 16197216  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactta---------tttgaaacttaaaggtctaacttg 214  Q
      ||||||||||||||||| || ||||| |  ||||  ||||||| ||||| ||||||||| || ||         ||||||||||||| |  |||||||    
T  16197215 aacatcagttaaacggagactgacaacaggcgtaatggtgaaataatttattaactaaaaggacctatttgatacttttgaaacttaaatgattaacttg 16197116  T
Q  215 ggaattctgtcaaactaaaa 234  Q
    ||||||||||||||||||||    
T  16197115 ggaattctgtcaaactaaaa 16197096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 9770770 - 9770854
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt---------aaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||||||||||| || ||||||||||||         ||||| |||||||||||||||||||||||||||||||    
T  9770770 tgaaatagtttatcaactaaaaggacctatttgaaacttttgaaaattaaaggactaacttgggaattctgtcaaactaaaatga 9770854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 25730035 - 25730191
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    ||||||||||||||| | |||||||| | | ||| |||||||||||||||| | || |  || || ||| | ||||||||||||||||||||||  || |    
T  25730035 ttttgatccaagtcaacaacttaacgactacatcagcatcagttaaacggatactgacggcaggggtaacagtgaaatagtttatcaactaaaatgacat 25730134  T
Q  190 atttgaaac---------ttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||||||||         ||||||| |||||||| ||||||||||||| ||||||||    
T  25730135 atttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaattaaaatga 25730191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 9277069 - 9277116
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaa 241  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||    
T  9277069 gaaacttaaaagactaacttgggaattctgtcaaactaaaatgatcaa 9277116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 29794343 - 29794392
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  29794343 gaaatttaaaggactaacttgggaattctgtcaaactaaaatgaccaaaa 29794392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 40553232 - 40553304
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||||| |||||  |  ||||||||||||||| |  ||||||| |||||||||||||||||||    
T  40553232 tgaaatagtttatcaagtaaaatgatctatttgaaacttaaatgattaacttgagaattctgtcaaactaaaa 40553304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 9770722 - 9770679
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  9770722 tttgaaacttaaaggactaacttcggaattctgtcaaactaaaa 9770679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 36360007 - 36359968
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  36360007 aaacttaaaggactaacttgggaattctgtcaaactaaaa 36359968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 36360160 - 36360211
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaatt 245  Q
    |||||||||| | ||||||||| ||||||||||||||||||||| |||||||    
T  36360160 gaaacttaaaagactaacttggaaattctgtcaaactaaaatgaccaaaatt 36360211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 9770686 - 9770628
Alignment:
Q  176 aactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||| || ||||||||||||||| | |||||||| ||||||| |||||||||||    
T  9770686 aactaaaaggacctatttgaaacttaaatgactaacttgagaattctctcaaactaaaa 9770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 13771578 - 13771468
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    ||||||| ||||||||| ||||||| | |  ||  |||||||||||| ||||| || || || ||  |||  |||||||||||||||||||||||||  |    
T  13771578 ttttgattcaagtcagcaacttaactgtcgcattagcatcagttaaatggagactgccagcaggggaaatggtgaaatagtttatcaactaaaagaatct 13771479  T
Q  190 atttgaaactt 200  Q
    |||||||||||    
T  13771478 atttgaaactt 13771468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 14871195 - 14871109
Alignment:
Q  28 aatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaac 114  Q
    ||||||||| ||||| ||||||||  | ||||||||||||||||||  ||||||| | |  |||||||||||||||| | |||||||    
T  14871195 aatgatcatttgtgaccattaaacgtaacgttttgacaccctgaagcttttaaaatccaacgttttgatccaagtcaacaacttaac 14871109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 25737521 - 25737631
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    ||||||||||||||| | |||||||| | | ||| |||||||||||||||| | || |  || || ||| | ||||||||||||||||||||||  |  |    
T  25737521 ttttgatccaagtcaacaacttaacgactacatcagcatcagttaaacggatactgacggcaggggtaacagtgaaatagtttatcaactaaaatgaaat 25737620  T
Q  190 atttgaaactt 200  Q
    |||||||||||    
T  25737621 atttgaaactt 25737631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 89 - 183
Target Start/End: Complemental strand, 35434058 - 35433964
Alignment:
Q  89 gttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaa 183  Q
    |||||||||||||||| | |||||||| ||| ||  | ||||||||||||| || || || ||||| ||| | ||||||| ||||||||||||||    
T  35434058 gttttgatccaagtcaacaacttaacgcccacattagtatcagttaaacggcgactgacagcaagggtaacagtgaaataatttatcaactaaaa 35433964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 45017794 - 45017745
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| |||||||||||||||| ||||||||||| || |||||    
T  45017794 gaaacttaaaggactaacttgggaattctatcaaactaaaaggaccaaaa 45017745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 8713896 - 8713844
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| || |||||    
T  8713896 tttgaaacttaaaggactaacttgagaattatgtcaaactaaaaggaccaaaa 8713844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 9277006 - 9277054
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||| ||||||||| |||||| ||||||||||| ||||    
T  9277006 tttgaaacttaaaggactaacttggaaattctatcaaactaaaaggatc 9277054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 36359948 - 36359908
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  36359948 gaaacttaaaggactaacttggaaattctgtcaaactaaaa 36359908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 242
Target Start/End: Original strand, 8714436 - 8714487
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaa 242  Q
    |||||| |||||||| ||||||||| |||||| ||||||||||| |||||||    
T  8714436 tttgaatcttaaaggactaacttggaaattctatcaaactaaaaggatcaaa 8714487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 31169570 - 31169617
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaa 242  Q
    ||||||||||| |||||||| ||||| |||||||||||||||| ||||    
T  31169570 aaacttaaaggactaacttgagaattttgtcaaactaaaatgaccaaa 31169617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 39701475 - 39701518
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||  |||||||| |||||||||||||||||||    
T  39701475 tttgaaacttaaagaactaacttgagaattctgtcaaactaaaa 39701518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 9276631 - 9276593
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  9276631 tgaaatagtttatcaactaaaaggacctatttgaaactt 9276593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 16208674 - 16208712
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  16208674 tgaaatagtttatcaactaaaaggacatatttgaaactt 16208712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 16208776 - 16208822
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaa 241  Q
    ||||||||||  |||||||| ||||||||||||||||||| ||||||    
T  16208776 aaacttaaagaactaacttgagaattctgtcaaactaaaaagatcaa 16208822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 25730210 - 25730256
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaa 241  Q
    ||||||||||| ||||||||| |||||| ||||||||||| ||||||    
T  25730210 aaacttaaaggactaacttggaaattctatcaaactaaaaggatcaa 25730256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 43423028 - 43422982
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||| ||||||| ||||||||| |||| ||||||||||||||||    
T  43423028 tttgaaatttaaaggactaacttggaaattttgtcaaactaaaatga 43422982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 45017857 - 45017811
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||||| |||||||| |||| ||||||||||||| ||||||||||||    
T  45017857 tttgaatcttaaaggactaatttgggaattctgttaaactaaaatga 45017811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 9770871 - 9770920
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| |||||||| ||||| ||||||||||||| || |||||    
T  9770871 gaaacttaaaggactaacttgagaattttgtcaaactaaaaggaccaaaa 9770920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 39701096 - 39700995
Alignment:
Q  99 aagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaac 198  Q
    |||||| | |||||||||| | ||| |||| ||||||||| ||| || || || || |||   ||||||||||||||||||||||  || ||||||||||    
T  39701096 aagtcaacaacttaacggctacatcagcattagttaaacgaagactgacagcaggggtaacggtgaaatagtttatcaactaaaatgacatatttgaaac 39700997  T
Q  199 tt 200  Q
    ||    
T  39700996 tt 39700995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 5358693 - 5358641
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||| |||| ||||||||  |||||||||||||||||| ||| ||||    
T  5358693 tttgaaacttgaaggactaacttgaaaattctgtcaaactaaaaggattaaaa 5358641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 242
Target Start/End: Original strand, 5359018 - 5359134
Alignment:
Q  126 catcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtc 225  Q
    ||||||||||||||||| || ||||| |  |||   ||||||| ||||||||||||||     ||||| |||||||||||  ||| |||  |||||||||    
T  5359018 catcagttaaacggagactgacaacaggagtaacggtgaaataatttatcaactaaaacggtgtatttaaaacttaaaggattaatttgataattctgtc 5359117  T
Q  226 aaactaaaatgatcaaa 242  Q
    ||||||||  |||||||    
T  5359118 aaactaaatagatcaaa 5359134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 23179240 - 23179160
Alignment:
Q  33 tcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaa 113  Q
    |||| ||||||||||||||  | ||||||||||| ||||||  |||||||   ||| ||||||||||||||| | ||||||    
T  23179240 tcatttgtgatcattaaacgtagcgttttgacactctgaagcttttaaaagacagtattttgatccaagtcaacaacttaa 23179160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 25737214 - 25737166
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||| ||||||| ||||||| ||||||| |||||||||||| ||||    
T  25737214 tttgaaatttaaaggactaacttaggaattcggtcaaactaaaaggatc 25737166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 29792603 - 29792643
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||| ||||||| |||| |||||||||||||||||||||||    
T  29792603 gaaatttaaaggactaatttgggaattctgtcaaactaaaa 29792643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 30576194 - 30576150
Alignment:
Q  199 ttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||| ||||||||||||||||||||| |||||| || |||||    
T  30576194 ttaaaggactaacttgggaattctgtcaagctaaaaagaccaaaa 30576150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 4e-38; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 234
Target Start/End: Complemental strand, 49650852 - 49650641
Alignment:
Q  23 ttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaat 122  Q
    ||||||||| |||| ||||||||||||||  |||||||||||||||||||   |||||||   |   ||||||||||| ||| | |||||||||| | ||    
T  49650852 ttataaatggtcat-tgtgatcattaaacgtatcgttttgacaccctgaaacttttaaaagacaacattttgatccaaatcaacaacttaacggctacat 49650754  T
Q  123 cggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt-aaaggtctaacttgggaattc 221  Q
    | ||||||||||||| || |||| || || || ||||| |||||| ||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||    
T  49650753 cagcatcagttaaacagatattgacagcaggggtaatagtgaaatggtttatcaactaaaagaacctatttgaaacttaaaaggactaacttgagaattc 49650654  T
Q  222 tgtcaaactaaaa 234  Q
    |||||||||||||    
T  49650653 tgtcaaactaaaa 49650641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 4772586 - 4772693
Alignment:
Q  127 atcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtca 226  Q
    |||||||||||| ||| || |||||||| |||   ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  4772586 atcagttaaacgaagactgacaacaagggtaacgatgaaatagtttatcaactaaaagaatttatttgaaacttaaaggactaacttggaaattctgtca 4772685  T
Q  227 aactaaaa 234  Q
    ||||||||    
T  4772686 aactaaaa 4772693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 49650985 - 49651062
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||||||||| | || ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  49650985 tgaaatagtttatcaactaaagggacctatttgaaacttaaaggactaacttgagaattctgtcaaactaaaatgatc 49651062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 4772249 - 4772179
Alignment:
Q  164 aaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||||||||||    
T  4772249 aaatagtttatcaactaaaagaacttatttgaaacttaaaggactaccttgtgaattttgtcaaactaaaa 4772179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 10685986 - 10685916
Alignment:
Q  164 aaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||||||||  || ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  10685986 aaatagtttatcaactaaaatgacatatttgaaacttaaaggactaacttggaaattctgtcaaactaaaa 10685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 2965754 - 2965861
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    ||||||||| || ||||||||||||| ||||| |||||||||||||||||||||  ||||||| |||| ||||  | |  |||||| ||||||||| |||    
T  2965754 gtctttctagccctataaatgatcatttgtgaccattaaacacatcgttttgactacctgaagcctttgaaacaca-tcgtttgattcaagtcagcaact 2965852  T
Q  111 taacggcca 119  Q
    |||||||||    
T  2965853 taacggcca 2965861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 27351513 - 27351591
Alignment:
Q  156 taatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||| |||||||||||||||| |||||| || ||||||||||||||||| |||| ||| ||||||| ||||| |||||    
T  27351513 taatagtgaaatagtttatcaagtaaaagcacctatttgaaacttaaaggactaatttgagaattctatcaaaataaaa 27351591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 8902983 - 8902826
Alignment:
Q  89 gttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaact 188  Q
    |||||||||||||||| | |||||||||| | ||| |||||||||||      || | ||||| || ||| | ||||||| ||||||||||||||| |||    
T  8902983 gttttgatccaagtcaacaacttaacggctacatcagcatcagttaattattaatcgacaacaggggtaacagtgaaataatttatcaactaaaaggact 8902884  T
Q  189 tattt---------gaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||||         |||||||||||| |||||||||||||| ||||||||||||||||    
T  8902883 tatttaaaacttttgaaacttaaaggactaacttgggaattttgtcaaactaaaatga 8902826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 200
Target Start/End: Complemental strand, 34254782 - 34254610
Alignment:
Q  27 aaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggc 126  Q
    |||||||| | ||||| ||||||||| | |||||| ||||| |||||  |||||||   ||  ||||||||||||||| | ||||| || | | |||  |    
T  34254782 aaatgatcgtttgtgaccattaaacatagcgttttaacaccatgaagcttttaaaaggcagcattttgatccaagtcaacaactta-cgactacatcaac 34254684  T
Q  127 atcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||||||||||| | || ||||| || ||| | |||||||||||||| |||||||| |  ||||||||||||    
T  34254683 atcagttaaacggatactgacaacaggggtaacagtgaaatagtttatcgactaaaagcatatatttgaaactt 34254610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 1765881 - 1765927
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||||||||||||||  |||||||| |||||||||||||||||||||    
T  1765881 tttgaaacttaaaggagtaacttggaaattctgtcaaactaaaatga 1765927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 10686653 - 10686727
Alignment:
Q  126 catcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||| || ||||| || |||   ||||||||||||||||||||||  || ||||||||||||    
T  10686653 catcagttaaacggagactgacaacatgggtaacggtgaaatagtttatcaactaaaatgacctatttgaaactt 10686727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 48352349 - 48352311
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  48352349 tgaaatagtttatcaactaaaagaacctatttgaaactt 48352311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 233
Target Start/End: Original strand, 48352755 - 48352797
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaa 233  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  48352755 tttgaaacttaaaggactaacttgggaattatgtcaaactaaa 48352797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 234
Target Start/End: Original strand, 4030599 - 4030800
Alignment:
Q  33 tcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggcatcagt 132  Q
    |||| ||||| |||||||| || |||||||||||||| |||  |||||||   ||| |||||||  ||||||   |||||||| | | ||  ||||||||    
T  4030599 tcatttgtgaccattaaacgcagcgttttgacaccctcaagcttttaaaatacagtattttgattaaagtcaaaaacttaacgcctatattagcatcagt 4030698  T
Q  133 taaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaa 232  Q
    |||| ||||| |  ||||| |  |||   |||||||||||| |||||||||  || |||||||||||||| ||  || ||||  |||||||| |||||||    
T  4030699 taaatggagacttacaacatgagtaaaggtgaaatagtttaccaactaaaatgacctatttgaaacttaagggattagcttgaaaattctgtgaaactaa 4030798  T
Q  233 aa 234  Q
    ||    
T  4030799 aa 4030800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 11897890 - 11897841
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||| | |||||||| |||||||||||||||||||||| |||||    
T  11897890 gaaacttaaatgactaacttgagaattctgtcaaactaaaatgaccaaaa 11897841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 34254610 - 34254562
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||| || |||| |||||||||||||||||||| ||||    
T  34254610 tttgaaacttaaaggactgacttaggaattctgtcaaactaaaaggatc 34254562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Original strand, 44964091 - 44964135
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||    
T  44964091 aaacttaaaggaataacttgagaattctgtcaaactaaaatgatc 44964135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 27351162 - 27351119
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  27351162 tttgaaacttaaaggactaacttgagaattatgtcaaactaaaa 27351119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 10686790 - 10686839
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| ||||||||  |||||||||||||||||| || |||||    
T  10686790 gaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaaa 10686839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 234
Target Start/End: Complemental strand, 11897947 - 11897910
Alignment:
Q  197 acttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||  |||||||||||||||||||||||||||    
T  11897947 acttaaaggattaacttgggaattctgtcaaactaaaa 11897910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 193
Target Start/End: Original strand, 29418886 - 29419051
Alignment:
Q  28 aatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggca 127  Q
    |||||| || |||||| |||||||  | ||| ||||||||||| ||  |||||||   ||| ||||||||||||||| | |||||||||| | ||| |||    
T  29418886 aatgattatttgtgatgattaaacgtaacgtgttgacaccctggagtttttaaaagacagtattttgatccaagtcaacaacttaacggctacatcagca 29418985  T
Q  128 tcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttattt 193  Q
    | ||||| || |||| ||  | || ||||||   |||| || ||||||||||||||  ||||||||    
T  29418986 ttagttatacagagactgataccagggataacggtgaagtaatttatcaactaaaatgacttattt 29419051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 48352818 - 48352867
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||| | |||||| ||||||||||||||||||||| || |||||    
T  48352818 gaaacttaaaagactaactcgggaattctgtcaaactaaaaggaccaaaa 48352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 10685896 - 10685856
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||| ||||||||  ||||||||||||||||||    
T  10685896 gaaacttaaaggactaacttgaaaattctgtcaaactaaaa 10685856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 27351099 - 27351059
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||| |||||||| ||||||||||||| |||||    
T  27351099 gaaacttaaaggactaacttgcgaattctgtcaaagtaaaa 27351059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 5e-31; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 28630452 - 28630672
Alignment:
Q  13 ctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgactta 112  Q
    ||||||||| |||||||||||||| |||||  ||||||||   ||||||||||||||| |   |||||||   ||  ||||||||||||||| | |||||    
T  28630452 ctttctaacgttataaatgatcatttgtgactattaaacatggcgttttgacaccctgtaacttttaaaaggcagcattttgatccaagtcaacaactta 28630551  T
Q  113 acggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaact 212  Q
    ||| | | ||| |||||||||||||||| | || ||||| || |||   ||||||||||||||||||||||| || |||||||| |||||||  ||||||    
T  28630552 acgactacatcagcatcagttaaacggatactgacaacaggggtaaaggtgaaatagtttatcaactaaaaggacctatttgaagcttaaagtactaact 28630651  T
Q  213 tgggaattctgtcaaactaaa 233  Q
    | ||||||||  |||||||||    
T  28630652 taggaattctaccaaactaaa 28630672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 197
Target Start/End: Original strand, 24139333 - 24139518
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    ||||||||| | |||||||| ||||||||||| ||||||||  | |||||| ||||| |||||  |||||||  |||||||||||||||||||| | |||    
T  24139333 gtctttctagcattataaataatcatctgtgaccattaaacgtagcgttttaacacc-tgaagcttttaaaatgtagtgttttgatccaagtcaacaact 24139431  T
Q  111 taacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaa 197  Q
    ||| ||| | ||| ||||||| |||||||||| || ||||| || | | | ||||||| ||||||||||||||  ||||||||||||    
T  24139432 taatggctacatcagcatcagataaacggagactgacaacaggggttacagtgaaataatttatcaactaaaaagacttatttgaaa 24139518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 16168605 - 16168530
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||||||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  16168605 tgaaatagtttatcaactaaaaggacctatttgaaacttaaaggactaacttggaaattctgtcaaactaaaatga 16168530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 10407568 - 10407755
Alignment:
Q  13 ctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgactta 112  Q
    ||||||| ||||||| |||||||| ||||| |||||||| | |||||||||||||||| ||||||||||||  |   ||||| ||||| ||| | |||||    
T  10407568 ctttctagccttatagatgatcatttgtgaccattaaacgcgtcgttttgacaccctggagactttaaaacgcaacattttgttccaattcaacaactta 10407667  T
Q  113 acggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    | || |||||||||||| ||||||| ||||  |  || |  | ||| | ||||||||||||||||||||||  || ||||||||||||    
T  10407668 atggtcaaatcggcatcggttaaacagagacagataaaagaggtaacagtgaaatagtttatcaactaaaatgacatatttgaaactt 10407755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 11527814 - 11527604
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    ||||||| ||||| ||||| |||||||   | |||||||||| ||| |||  |||||||  ||   ||||||||||| ||| | |||||||| | | |||    
T  11527814 tataaattatcatttgtgaccattaaaagtagcgttttgacagccttaagcttttaaaaggtaacattttgatccaactcaacaacttaacgactacatc 11527715  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctg 223  Q
     |||||| ||||||||| | || || || || |||   ||||||||||||||||||||||  || ||||||||||||||||| |||||||| ||||| ||    
T  11527714 agcatcaattaaacggatactgacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaacttaaaggactaacttgtgaattttg 11527615  T
Q  224 tcaaactaaaa 234  Q
    |||||||||||    
T  11527614 tcaaactaaaa 11527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 2839765 - 2839693
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||||||||||| ||| ||||||||| ||||||| |||||||| ||||||||||||| |||||    
T  2839765 tgaaatagtttatcaactaaaaaaacctatttgaaatttaaaggactaacttgagaattctgtcaaattaaaa 2839693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 9946689 - 9946764
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||||||||||| || | ||||||| ||||||| |||| |||| |||| ||||||||||||||||    
T  9946689 tgaaatagtttatcaactaaaaggacctctttgaaatttaaaggactaatttggaaattatgtcaaactaaaatga 9946764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 2840036 - 2840113
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||||||||||  || ||||||||||||||| |  ||||||| ||||||||| ||||||||| ||||    
T  2840036 tgaaatagtttatcaactaaaatgacctatttgaaacttaaatgattaacttgagaattctgttaaactaaaaggatc 2840113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 20575610 - 20575653
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20575610 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 20575653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 135
Target Start/End: Complemental strand, 10963022 - 10962914
Alignment:
Q  27 aaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggc 126  Q
    |||||||||| ||||| ||||||||  | |||||||||| ||| |||  |||||||   ||  ||||||||||||||| | |||||||||| | ||| ||    
T  10963022 aaatgatcatttgtgaccattaaacgtagcgttttgacatcctaaagcttttaaaaaacagcattttgatccaagtcaacaacttaacggctacatcagc 10962923  T
Q  127 atcagttaa 135  Q
    |||||||||    
T  10962922 atcagttaa 10962914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 200
Target Start/End: Complemental strand, 9902121 - 9902010
Alignment:
Q  89 gttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaact 188  Q
    |||||||||||||||| | |||||| ||| |  ||  ||||||||||||| ||||||  |||| || |||   ||||||||||||||||||||||  ||     
T  9902121 gttttgatccaagtcaacaacttaatggctacctcaacatcagttaaacgaagattgataacaggggtaacgatgaaatagtttatcaactaaaatgacc 9902022  T
Q  189 tatttgaaactt 200  Q
    ||||| ||||||    
T  9902021 tatttaaaactt 9902010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 10862665 - 10862704
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  10862665 aaacttaaaggactaacttgagaattctgtcaaactaaaa 10862704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 32417640 - 32417597
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||    
T  32417640 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaa 32417597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 32423481 - 32423438
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||    
T  32423481 tttgaaacttaaaggactaatttggaaattctgtcaaactaaaa 32423438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 10862562 - 10862600
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  10862562 tgaaatagtttatcaactaaaaggacctatttgaaactt 10862600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 20575646 - 20575703
Alignment:
Q  176 aactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||| || |||||||||||| |||  |||||||||||||| |||||||||||||    
T  20575646 aactaaaaggacctatttgaaacttgaaga-ctaacttgggaattttgtcaaactaaaa 20575703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 32417688 - 32417726
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  32417688 tgaaatagtttatcaactaaaaggacctatttgaaactt 32417726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 32423529 - 32423567
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  32423529 tgaaatagtttatcaactaaaaggacctatttgaaactt 32423567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 9902276 - 9902321
Alignment:
Q  189 tatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||||  |||||| ||||||| |||||||||||||    
T  9902276 tatttgaaacttaaagaactaactcgggaattatgtcaaactaaaa 9902321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 16168767 - 16168816
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||| | |||| |||| |||||||||||||||||| ||||||||    
T  16168767 gaaacttaaatgactaatttggaaattctgtcaaactaaaaagatcaaaa 16168816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 32417517 - 32417468
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| ||||||||  |||||||||||||||||| || |||||    
T  32417517 gaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaaa 32417468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 32417789 - 32417838
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||| ||||||  |||||||||||||||||| ||||||||| ||||||||    
T  32417789 gaaagttaaagaactaacttgggaattctgtaaaactaaaaagatcaaaa 32417838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 32423358 - 32423309
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| ||||||||  |||||||||||||||||| || |||||    
T  32423358 gaaacttaaaggactaacttgaaaattctgtcaaactaaaaggaccaaaa 32423309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 32423630 - 32423679
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||| ||||||  |||||||||||||||||| ||||||||| ||||||||    
T  32423630 gaaagttaaagaactaacttgggaattctgtaaaactaaaaagatcaaaa 32423679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 20575460 - 20575420
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||| ||||||||| |||||| |||||||||||    
T  20575460 gaaacttaaaggactaacttggaaattctatcaaactaaaa 20575420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 243
Target Start/End: Original strand, 35555820 - 35556039
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    |||||||||| || ||||||||||||||  | ||||||||||||||  ||  |||||||   ||  ||||||||||||||| | |||||||||| | |||    
T  35555820 tataaatgataatttgtgatcattaaacgtagcgttttgacacccttgagcttttaaaatgaagcattttgatccaagtcaacaacttaacggctacatc 35555919  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctg 223  Q
     ||||| |||||||||||| || |  ||| |||||   ||||||||||||| ||||||||  || |||||||||||||||||  ||||||||||||| ||    
T  35555920 agcatcggttaaacggagactgacgtcaacgataacggtgaaatagtttattaactaaaatgacctatttgaaacttaaaggattaacttgggaattttg 35556019  T
Q  224 tcaaactaaaatgatcaaaa 243  Q
     |||||||||| || |||||    
T  35556020 ccaaactaaaaggaccaaaa 35556039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 38 - 211
Target Start/End: Original strand, 33974948 - 33975120
Alignment:
Q  38 tgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaac 137  Q
    |||||||||||||| || | |||||||||||| ||| |||| ||||  |  ||||| || |||| |||| |||||||||||| |||  |||||||||||     
T  33974948 tgtgatcattaaactcagcattttgacaccctaaagcctttgaaacgcatcgttttaattcaag-cagcaacttaacggccacatcaacatcagttaaat 33975046  T
Q  138 ggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaac 211  Q
    ||||| || ||| | |||||||  ||||||| |||||||||||||||||| ||||||||||||||||| |||||    
T  33975047 ggagactgacaatagggataatggtgaaataatttatcaactaaaagaacctatttgaaacttaaaggactaac 33975120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 4276600 - 4276677
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||||||||||  |  ||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  4276600 tgaaatagtttatcaactaaaatgatctatttgaaacttaaaggactaacttgggaattctgtcaaactaaaatgatc 4276677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 14629365 - 14629293
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||    
T  14629365 tgaaataatttatcaactaaaagaacctatttgaaacttaaaggactaacttgggaattctgtcaaagtaaaa 14629293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 21410134 - 21410302
Alignment:
Q  13 ctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgactta 112  Q
    ||||||| || ||||| ||||||| ||||| |||||||| || |||||||||||||||||| |||| |||| ||  ||||||||||||  || | |||||    
T  21410134 ctttctagccctataactgatcatttgtgaccattaaacgcagcgttttgacaccctgaagcctttgaaacatatcgttttgatccaa--caacaactta 21410231  T
Q  113 acggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaa 183  Q
    ||| |||  || |||||||||| ||||| | || ||| |  | ||| | ||||||||||||||||||||||    
T  21410232 acgaccacttcagcatcagttacacggaaactgacaatagaggtaacagtgaaatagtttatcaactaaaa 21410302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 90 - 200
Target Start/End: Original strand, 31247547 - 31247657
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    |||||||| |||||| | |||||||  | | ||| |||||||||||||||||| || ||||| || ||||| ||||||| ||||||||||||||  || |    
T  31247547 ttttgatcaaagtcaacaacttaacaactatatcagcatcagttaaacggagactgacaacaggggtaatagtgaaataatttatcaactaaaatgacat 31247646  T
Q  190 atttgaaactt 200  Q
    |||||||||||    
T  31247647 atttgaaactt 31247657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 3088077 - 3088149
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||||| |||||| || ||||||||||||||||| |||||| || |||  |||||||||||||    
T  3088077 tgaaatagtttatcaattaaaaggacctatttgaaacttaaaggactaactaggaaatcatgtcaaactaaaa 3088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 205
Target Start/End: Original strand, 21376994 - 21377037
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaagg 205  Q
    ||||||||||||| ||||||||| || |||||||||||||||||    
T  21376994 tgaaatagtttataaactaaaaggacctatttgaaacttaaagg 21377037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 50530385 - 50530311
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||||||||||||||| |||||  || ||||| |||||||| || | || ||| ||||||||||||||||||||||    
T  50530385 tgaaatagtttatcaattaaaatgacctatttaaaacttaa-ggacaaatttgagaattctgtcaaactaaaatga 50530311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 31247720 - 31247769
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| ||||||||| |||||||||||| ||||| || |||||    
T  31247720 gaaacttaaaggactaacttggaaattctgtcaaattaaaaggaccaaaa 31247769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 31247273 - 31247237
Alignment:
Q  164 aaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||||||||||||||| || |||||||||||||||    
T  31247273 aaatagtttatcaactaataggacttatttgaaactt 31247237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 50530297 - 50530245
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||| | |||| |||  |||||||||||||||||| ||||||||    
T  50530297 tttgaaacttaaaagactaagttgaaaattctgtcaaactaaaaggatcaaaa 50530245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 234
Target Start/End: Original strand, 44916227 - 44916367
Alignment:
Q  94 gatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttattt 193  Q
    |||| |||||| | |||||||||||| |||  ||||||||||||||||| |||||  | || ||| | |||||||||||||||||||||| ||| |||||    
T  44916227 gatcaaagtcaacaacttaacggccacatcaacatcagttaaacggagactggcagtaggggtaacagtgaaatagtttatcaactaaaataacctattt 44916326  T
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||| ||||||||  |||| |||||||||||||    
T  44916327 gaaacttaaaggactaacttgaaaattttgtcaaactaaaa 44916367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 243
Target Start/End: Complemental strand, 2508490 - 2508261
Alignment:
Q  21 ccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaa 120  Q
    |||||||||||||||| | |||  |||||||||| | |||||||| |||  | |||| |||||  |  ||||||||||||||||||  ||||| ||||||    
T  2508490 ccttataaatgatcatttatgactattaaacacaacattttgacatcctagatacttgaaaacgcaacgttttgatccaagtcagcagcttaaaggccaa 2508391  T
Q  121 atcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt-------atttgaaacttaaaggtctaactt 213  Q
    ||| |||||||||||||| ||| || |||||| | ||| | |||||| |||||||||||| ||  || |        |||||| |||||||| |||||||    
T  2508390 atcagcatcagttaaacgaagaatgacaacaacggtaacaatgaaatggtttatcaactagaatgacatttgaaacttttgaagcttaaaggactaactt 2508291  T
Q  214 gggaattctgtcaaactaaaatgatcaaaa 243  Q
    || |||||||||||||||||| ||||||||    
T  2508290 ggaaattctgtcaaactaaaaggatcaaaa 2508261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 42115859 - 42115683
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    ||||||||||||| ||||| |||||||| || | || ||||  |||| || |||| ||||  |  |||||||||||||||||| |||||| | ||| |||    
T  42115859 tataaatgatcatttgtgaccattaaacgcaacattctgactacctggagcctttgaaacgcatcgttttgatccaagtcagcaacttaatgcccacatc 42115760  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
     |||||||||||||||||| || ||||| ||||||   ||||||||||||| | ||||||| |||||||| ||||||    
T  42115759 agcatcagttaaacggagaatgacaacatggataaccgtgaaatagtttattatctaaaaggacttatttaaaactt 42115683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 52183408 - 52183480
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| ||  ||||||||||||||||||||||||    
T  52183408 tgaaatagtttatcaacttaaaaaacttatttgaaacttaaaggactggcttgggaattctgtcaaactaaaa 52183480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 52866347 - 52866410
Alignment:
Q  171 ttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||| || | ||||||||||||||| ||||||||||||||||||||||||||||    
T  52866347 ttatcaactaaaaggacatttttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 52866410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 191 - 238
Target Start/End: Complemental strand, 5387237 - 5387190
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgat 238  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5387237 tttgaaacttaaagggctaacttgggaattctgtcaaactaaaatgat 5387190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 42115894 - 42116023
Alignment:
Q  12 tctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgactt 111  Q
    |||||||| || ||||||||| ||| || |||||||||||  | ||||||||||||||| |||| |||||||  || |||||||||||||||| | |||     
T  42115894 tctttctagccctataaatgaacatttgagatcattaaacgtagcgttttgacaccctggagac-ttaaaacacagcgttttgatccaagtcatcaactc 42115992  T
Q  112 aacggccaaatcggcatcagttaaacggaga 142  Q
    ||| |  |||||| ||| |||||||||||||    
T  42115993 aacagttaaatcgacattagttaaacggaga 42116023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 52181826 - 52181783
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  52181826 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 52181783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 43098365 - 43098411
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  43098365 tttgaaacttaaaggactaacttgggaattctgttaaactaaaatga 43098411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 19631905 - 19631831
Alignment:
Q  164 aaatagtttatcaactaaaagaacttatttgaaacttaaaggtc----taacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||||||||  || ||||||||||||||||| |    ||||||| |||||||||||||||||||    
T  19631905 aaatagtttatcaactaaaatgacctatttgaaacttaaaggactaattaacttgagaattctgtcaaactaaaa 19631831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 35046560 - 35046605
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatg 236  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||    
T  35046560 tttgaaacttaaaggactaacttgggaattatgtcaaactaaaatg 35046605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 26330020 - 26330068
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  26330020 tttgaaacttaaaggactaacttgggaattctgtaaaactaaaaggatc 26330068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 30543112 - 30543184
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||||| |||||  | |||||||||| ||||||| ||||||||  |||| |||||||||||||    
T  30543112 tgaaatagtttatcaattaaaatgatttatttgaaatttaaaggactaacttgataattttgtcaaactaaaa 30543184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 52866096 - 52866024
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||||||||||  || ||||||||||||||||| |||  ||| | ||| |||||||||||||    
T  52866096 tgaaatagtttatcaactaaaatgacctatttgaaacttaaaggactagattgagcattttgtcaaactaaaa 52866024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 26329874 - 26329831
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  26329874 tttgaaacttaaagggctaacttggaaattctgtcaaactaaaa 26329831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 43098425 - 43098468
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| |||||||||||||| |||||||||||||    
T  43098425 tttgaaacttaaaggactaacttgggaattttgtcaaactaaaa 43098468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 2788928 - 2788974
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||| | |||||||| ||||||||||||||||||||||    
T  2788928 tttgaaacttaaatgactaacttgagaattctgtcaaactaaaatga 2788974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 2788988 - 2789034
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||    
T  2788988 tttgaaacttaaaggactaacttgaaaattctgtcaaactaaaatga 2789034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 200
Target Start/End: Original strand, 8408686 - 8408873
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    ||||||||| | ||||||||||  || ||||||||||||||| | ||||||||||   |||||  |||||||   |   ||||||||||||||| | |||    
T  8408686 gtctttctagcattataaatga--atatgtgatcattaaacatagcgttttgacattttgaagcttttaaaagacaacattttgatccaagtcaacaact 8408783  T
Q  111 taacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||| |  ||  |||||||||||| |||| ||  ||||||| ||    |||||||||||||||||||| |  || ||||||||||||    
T  8408784 taacggctatctcaacatcagttaaacagagactgaaaacaagggtagcggtgaaatagtttatcaactaagatgacctatttgaaactt 8408873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 22025202 - 22025164
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  22025202 tgaaatagtttatcaactaaaagaacctatttgaaactt 22025164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 234
Target Start/End: Original strand, 22025319 - 22025357
Alignment:
Q  196 aacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  22025319 aacttaaaggactaacttgggaattctgtcaaactaaaa 22025357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 31229404 - 31229366
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  31229404 tgaaatagtttatcaactaaaagaacctatttgaaactt 31229366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 43098327 - 43098289
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  43098327 tgaaatagtttatcaactaaaaggacttatttgaaactt 43098289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 44916134 - 44915966
Alignment:
Q  14 tttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaa 113  Q
    |||||| || ||||||||||||| |||||   |||||  || |||||||||||| || || || ||||||  |||||||||||| |||||||| ||||||    
T  44916134 tttctagccctataaatgatcatttgtgacttttaaaagcagcgttttgacaccatgtagcctctaaaactcagtgttttgatcaaagtcagcaacttaa 44916035  T
Q  114 cggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaa 183  Q
     | ||| |||   |||||||||| | ||||||  | || || ||| | ||||||| ||||||||||||||    
T  44916034 agaccacatc-atatcagttaaatgaagattgatagcaggggtaacagtgaaataatttatcaactaaaa 44915966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 35046539 - 35046491
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||| |||| || |||||||||||||||||||| ||||    
T  35046539 tttgaaacttaaaggactaatttaggaattctgtcaaactaaaaggatc 35046491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 41735966 - 41736002
Alignment:
Q  207 ctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||||||||||||||||||| ||||||||    
T  41735966 ctaacttgggaattctgtcaaactaaaaggatcaaaa 41736002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 26329960 - 26330003
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||| | |||||||||||||| |||||||||||||    
T  26329960 tttgaaacttaaatgactaacttgggaattatgtcaaactaaaa 26330003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 26330084 - 26330123
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  26330084 aaacttaaaggactaacttgagaattctgtcaaactaaaa 26330123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 41735863 - 41735820
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| |||||||||||||| ||| |||||||||    
T  41735863 tttgaaacttaaaggactaacttgggaattatgttaaactaaaa 41735820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 11 - 237
Target Start/End: Original strand, 52568023 - 52568254
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    ||||||||| |  ||||||||||||| ||||| ||||||||  | ||||||||||||||  ||  ||||||||  |   |||||||||||||||   |||    
T  52568023 gtctttctatcactataaatgatcatttgtgaccattaaacgtagcgttttgacaccctagagcttttaaaacgcatcattttgatccaagtca---act 52568119  T
Q  111 taacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatt--------tgaaacttaa 202  Q
    ||| ||| | |||  |||| |||||||||| || | || || || |||   ||||||||||||||||||||| || ||  ||        ||||||||||    
T  52568120 taatggctacatcaacatcggttaaacggatatggacatcaggggtaacggtgaaatagtttatcaactaaaggatctatttgaaacttttgaaacttaa 52568219  T
Q  203 aggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||| || ||||| ||||||| ||||||||||||||    
T  52568220 aggactgacttgagaattctatcaaactaaaatga 52568254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 52866003 - 52865964
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  52866003 aaacttaaaggactaacttgagaattctgtcaaactaaaa 52865964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 2508634 - 2508708
Alignment:
Q  126 catcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||| |||||| |||| || || ||||||||| | ||||||| ||||||||||||||| || ||||| ||||||    
T  2508634 catcaattaaacagagactgacatcaaggataacactgaaataatttatcaactaaaaggacatatttaaaactt 2508708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 8408417 - 8408359
Alignment:
Q  176 aactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||| |  ||||||||||||||||  ||||||||| |||| |||||||||||||    
T  8408417 aactaaaaggatctatttgaaacttaaagaactaacttggaaattttgtcaaactaaaa 8408359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 31229592 - 31229650
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccct 69  Q
    ||||||||| |  ||||||||||||| ||||| ||||||||| | ||||||||||||||    
T  31229592 gtctttctagcactataaatgatcatttgtgaccattaaacatagcgttttgacaccct 31229650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 8408936 - 8408985
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||| | |||||||| ||||| |||||||||||||||| |||||    
T  8408936 gaaacttaaatgactaacttgagaattatgtcaaactaaaatgaccaaaa 8408985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 42116081 - 42116133
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||||| |||||||   |||| |||||||||||||||| |||||    
T  42116081 tttgaaacttaaaggactaacttaaaaattttgtcaaactaaaatgaccaaaa 42116133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 234
Target Start/End: Original strand, 5559465 - 5559674
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    |||||||||| || ||||| ||||||||  | ||||||||||||||| ||  |||||||   ||  |||||||| || ||| | |||||||| | | |||    
T  5559465 tataaatgattatttgtgaccattaaacgtagcgttttgacaccctggagcttttaaaaggcagcattttgatcaaactcaacaacttaacgactacatc 5559564  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctg 223  Q
     |||||||||||||||| | ||  | || || |||   |||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  5559565 agcatcagttaaacggatactgatagcaggggtaacggtgaaatagtt-atcaactaaaaagacttatttgaaacttaaaggactaacttgggaattctg 5559663  T
Q  224 tcaaactaaaa 234  Q
    |||||||||||    
T  5559664 tcaaactaaaa 5559674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 1286668 - 1286481
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    ||||||||| |  ||||||||| ||| ||||| ||||||||| | ||||||||||||||| ||  |||||||  |||||||| ||||||||||| | |||    
T  1286668 gtctttctagcactataaatgaacatttgtgaccattaaacatagcgttttgacaccctggagcttttaaaaagtagtgtttggatccaagtcaacaact 1286569  T
Q  111 taacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||| | |||  ||||||||||||||||| || || || || |||   ||  ||| |||||||||||||||||| ||||||||||||    
T  1286568 taacggctacatcaacatcagttaaacggagactgacagcaggggtaacggtg--ataatttatcaactaaaagaacctatttgaaactt 1286481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 1441417 - 1441492
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||||||||||| || ||||||||||||||| | |||||||||||||||| ||||||||||||||    
T  1441417 tgaaatagtttatcaactaaaaggacctatttgaaacttaaaagactaacttgggaattctatcaaactaaaatga 1441492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 31893390 - 31893315
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||||||||||||| |||||||  || ||||||||||||||| | ||||||| |||||||||||||||||||||||    
T  31893390 tgaaatagtttatcgactaaaatgacctatttgaaacttaaaagactaacttaggaattctgtcaaactaaaatga 31893315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 233
Target Start/End: Original strand, 36566497 - 36566568
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaa 233  Q
    ||||||||||||||||||||||  || ||||||||||||||| | ||||||||| |||||||||||||||||    
T  36566497 tgaaatagtttatcaactaaaaagacatatttgaaacttaaaagactaacttggaaattctgtcaaactaaa 36566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 39958827 - 39958752
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||||||||||| || |||||||||||||||||  ||   |||||||||||||||||||||||||    
T  39958827 tgaaatagtttatcaactaaaaggacctatttgaaacttaaaggattagaatgggaattctgtcaaactaaaatga 39958752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 234
Target Start/End: Original strand, 31893474 - 31893532
Alignment:
Q  176 aactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||    
T  31893474 aactaaaaggacttatttgaaacttaaaggactaacttgagaattctgtcaaactaaaa 31893532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 8040131 - 8040207
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    |||||||||| |||||||||||| || ||||||||||||||||| |||||||||| |||||||||| |||||| ||||    
T  8040131 tgaaatagttcatcaactaaaaggacctatttgaaacttaaaggactaacttggg-attctgtcaagctaaaaggatc 8040207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 10620213 - 10620282
Alignment:
Q  165 aatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||| |||||||||||||| ||||||||||||||||||||| || |||||| |||||||| |||||||||    
T  10620213 aataatttatcaactaaaataacttatttgaaacttaaaggacttacttggaaattctgttaaactaaaa 10620282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 28256921 - 28256996
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||| |||||||||||||| ||| ||||| ||||||||||| ||||||||  |||| ||||||||||||||||    
T  28256921 tgaaataatttatcaactaaaataacatatttaaaacttaaaggactaacttgaaaattttgtcaaactaaaatga 28256996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 90 - 237
Target Start/End: Original strand, 42990921 - 42991067
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    ||||||||||||||| | |||||||||| | ||  |||||||||||| ||||| |  ||||| ||  ||   ||||||||||||||||||||||  || |    
T  42990921 ttttgatccaagtcaacaacttaacggctacattagcatcagttaaatggagactaacaacaggggaaacggtgaaatagtttatcaactaaaaagacct 42991020  T
Q  190 atttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||| ||| |||||| | |||||||  |||||||||||||||||||||    
T  42991021 atttaaaatttaaagat-taacttgaaaattctgtcaaactaaaatga 42991067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 234
Target Start/End: Complemental strand, 35215028 - 35214875
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    ||||||||||||||| | ||| |||||| | |||  ||||||||||||||||| || ||||| || |||   ||||||||||||||||||||||  || |    
T  35215028 ttttgatccaagtcaacaactaaacggctacatcaacatcagttaaacggagactgacaacaggggtaacggtgaaatagtttatcaactaaaaagacct 35214929  T
Q  190 a---------tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |         ||||||||||||| | |||||||| |||||||||||||||||||    
T  35214928 atttgaaatttttgaaacttaaaagactaacttgagaattctgtcaaactaaaa 35214875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 1346624 - 1346548
Alignment:
Q  163 gaaatagtttatcaactaaaagaactta-----tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||||||||||||||||      ||||||||||||||| ||||||||| |||| |||||||||||||    
T  1346624 gaaatagtttatcaactaaaagaacttgaaacttttgaaacttaaaggactaacttggaaattatgtcaaactaaaa 1346548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 19925351 - 19925399
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  19925351 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaaggatc 19925399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 5805325 - 5805106
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    ||||||||||||| ||||| ||||||||| | ||||||||||||||  |   |||||||   ||  ||||||||||||||| | |||||| ||||| |||    
T  5805325 tataaatgatcatttgtgaccattaaacatagcgttttgacaccctcgaacttttaaaatgcagcattttgatccaagtcaacaacttaaaggccacatc 5805226  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactta---------tttgaaacttaaaggtctaacttg 214  Q
     |||||| ||||| ||||| ||  |  | ||| || |  |||||||||||||||||||||| || ||         |||||||||||||||  || ||||    
T  5805225 agcatcaattaaatggagactgataggagggaaaacaacgaaatagtttatcaactaaaaggacctagttaaaacttttgaaacttaaaggaatagcttg 5805126  T
Q  215 ggaattctgtcaaactaaaa 234  Q
     |||||||||||||||||||    
T  5805125 agaattctgtcaaactaaaa 5805106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 8039867 - 8039757
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    |||||||| |||||| | |||||||||| | ||| |||||||||||||||| | |  || || || |||   ||||||||||||||||||||||| || |    
T  8039867 ttttgatcaaagtcaacaacttaacggctacatcagcatcagttaaacggatactaacagcaggggtaacggtgaaatagtttatcaactaaaaggacct 8039768  T
Q  190 atttgaaactt 200  Q
    |||||||||||    
T  8039767 atttgaaactt 8039757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 21433348 - 21433394
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||    
T  21433348 tttgaaacttaaaggattaacttgggaattctgtcaaactaaaatga 21433394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 205
Target Start/End: Original strand, 28104490 - 28104684
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    |||||||||||| ||||||||||||| |||||  |||||||||| |||||||||  | || |  |||| || |  |  |||||||| |||||||||   |    
T  28104490 gtctttctaaccatataaatgatcatttgtgacaattaaacacaacgttttgactacatggaatctttgaagcacatcgttttgattcaagtcagcaggt 28104589  T
Q  111 taacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaagg 205  Q
    ||||||||| |||  ||||||||||||| | | || |||||  | |||   ||||||| |||||||||| |||  |||||||| |||||||||||    
T  28104590 taacggccagatcaccatcagttaaacgaaaactgacaacataggtaacggtgaaataatttatcaactgaaatgacttatttaaaacttaaagg 28104684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 28256642 - 28256556
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaac---------ttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    |||||||||||||||||||||||||| ||||||||||         ||||||| |||||||| ||||||||||||||||||| ||||    
T  28256642 tgaaatagtttatcaactaaaagaacctatttgaaacttttgaaatttaaaggactaacttgagaattctgtcaaactaaaaggatc 28256556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 1441057 - 1441006
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaa 242  Q
    |||||||||||||   |||||||||||||||||||||||||||| |||||||    
T  1441057 tttgaaacttaaaatactaacttgggaattctgtcaaactaaaaggatcaaa 1441006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 31175970 - 31176013
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  31175970 tttgaaacttaaaggactaacttggaaattctgtcaaactaaaa 31176013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 33235145 - 33235102
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||    
T  33235145 tttgaaatttaaaggtctaacttgggaattctgtcaaaccaaaa 33235102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 10619875 - 10619817
Alignment:
Q  176 aactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||| || ||||||||| |||| |||| || ||||||||||||||||||||    
T  10619875 aactaaaagaacctaattgaaacttgaaggactaatttaggaattctgtcaaactaaaa 10619817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 22876867 - 22876913
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||||    
T  22876867 tttgaaacttaaaggattaacttgagaattctgtcaaactaaaatga 22876913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 21433192 - 21433143
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| |||||||| ||||| ||||||||||||| ||||||||    
T  21433192 gaaacttaaaggactaacttgtgaattttgtcaaactaaaaggatcaaaa 21433143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 33879592 - 33879641
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| |||||||| ||||||||||||||||||| || |||||    
T  33879592 gaaacttaaaggactaacttgtgaattctgtcaaactaaaaggaccaaaa 33879641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 5559694 - 5559742
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||| |||||||||||||| ||||||||||||| || |||||    
T  5559694 aaacttaaaggactaacttgggaattttgtcaaactaaaaggaccaaaa 5559742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 5805086 - 5805046
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  5805086 gaaacttaaaggactaacttgagaattctgtcaaactaaaa 5805046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 243
Target Start/End: Complemental strand, 20101858 - 20101822
Alignment:
Q  207 ctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20101858 ctaacttgggaattcagtcaaactaaaatgatcaaaa 20101822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 21412977 - 21412929
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||| ||||||||  |||||||||||||||||| ||||    
T  21412977 tttgaaacttaaaggactaacttgaaaattctgtcaaactaaaaggatc 21412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 21413037 - 21412989
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||| | |||||||| ||||||||| ||||||||||||||    
T  21413037 tttgaaacttaaaagactaacttgagaattctgtgaaactaaaatgatc 21412989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 27995172 - 27995124
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    |||||||||||||||  ||||||| ||||||||||||| ||||||||||    
T  27995172 tttgaaacttaaaggattaacttgagaattctgtcaaattaaaatgatc 27995124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 21433255 - 21433212
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||| | |||||||||||||||| |||||||||||    
T  21433255 tttgaaacttaaatgactaacttgggaattctttcaaactaaaa 21433212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 28256544 - 28256493
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaa 242  Q
    ||||||| ||||||   ||||||||||||||||||||||||||| |||||||    
T  28256544 tttgaaatttaaagaagtaacttgggaattctgtcaaactaaaaggatcaaa 28256493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 31893438 - 31893481
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  31893438 tttgaaacttaaaggactaacttgagaattttgtcaaactaaaa 31893481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 5559258 - 5559220
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  5559258 tgaaatagtttatcaactaaaaggacctatttgaaactt 5559220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 10619949 - 10619911
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  10619949 tgaaatagtttatcaactaaaaggacctatttgaaactt 10619911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Complemental strand, 34951376 - 34951338
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  34951376 tgaaatagtttatcaactaaaatgacttatttgaaactt 34951338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 36566449 - 36566403
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||| ||||||| |||||||| ||||| ||||||||||||||||    
T  36566449 tttgaaatttaaaggactaacttgagaattttgtcaaactaaaatga 36566403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 39959169 - 39959207
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||||||||||||| ||||||||| ||||||||||||    
T  39959169 tgaaatagtttatcaagtaaaagaacctatttgaaactt 39959207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 1346528 - 1346479
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||  |||||||  ||||||||||||||||||| ||||||||    
T  1346528 gaaacttaaagcactaacttaagaattctgtcaaactaaaaggatcaaaa 1346479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 1441509 - 1441558
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||| |||||| |||||||||||||| ||||||||||||| || |||||    
T  1441509 gaaacctaaaggactaacttgggaattatgtcaaactaaaaggaccaaaa 1441558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 21433287 - 21433332
Alignment:
Q  191 tttgaaacttaaaggt-ctaacttgggaattctgtcaaactaaaat 235  Q
    ||||||||||||| || ||||||||||||||||||||||| |||||    
T  21433287 tttgaaacttaaaagtactaacttgggaattctgtcaaacaaaaat 21433332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 34951538 - 34951587
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| ||||||||  |||||||||||||||||| || |||||    
T  34951538 gaaacttaaaggactaacttgataattctgtcaaactaaaaagaccaaaa 34951587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 35215284 - 35215337
Alignment:
Q  147 caacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||||| ||| | ||||||||||||||||||||||  | |||||||||||||    
T  35215284 caacaagggtaacaatgaaatagtttatcaactaaaatgagttatttgaaactt 35215337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 5559159 - 5559115
Alignment:
Q  191 tttgaaacttaaa-ggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||| || |||||||||||||||||||||| |||||    
T  5559159 tttgaaacttaaaaggactaacttgggaattctgtcaaattaaaa 5559115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Original strand, 10620088 - 10620136
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaa 72  Q
    ||||||||||||| ||||| ||||||||  | |||||||||||||||||    
T  10620088 tataaatgatcatttgtgaccattaaacgtagcgttttgacaccctgaa 10620136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 239
Target Start/End: Original strand, 20366551 - 20366599
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    |||||||| |||||| |||||||| ||||| ||||||||||||| ||||    
T  20366551 tttgaaacctaaaggactaacttgcgaattttgtcaaactaaaaggatc 20366599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 31893553 - 31893601
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||| ||||||| | |||||||||||||||||| || |||||    
T  31893553 aaacttaaaggactaacttagaaattctgtcaaactaaaaggaccaaaa 31893601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 33235077 - 33235033
Alignment:
Q  199 ttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||  ||||||| |||||||||||||||||||||| |||||    
T  33235077 ttaaaggattaacttgagaattctgtcaaactaaaatgaacaaaa 33235033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 24 - 200
Target Start/End: Original strand, 36196341 - 36196517
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    ||||||||||||| ||||| ||||||||  | ||||||||||||||  ||  |||||||   ||  ||||||||||||||| | |||||||||| | |||    
T  36196341 tataaatgatcatttgtgaccattaaacgtagcgttttgacaccctcgagtttttaaaaggcagcattttgatccaagtcaacaacttaacggctatatc 36196440  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
     |||||||||||||||||| || || || || |||   ||||||||||||||||||||||  || ||||||||||||    
T  36196441 agcatcagttaaacggagactgacagcaggggtaacggtgaaatagtttatcaactaaaatgacctatttgaaactt 36196517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 234
Target Start/End: Complemental strand, 27893175 - 27893102
Alignment:
Q  161 ttgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||||||||||||||  || ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  27893175 ttgaaatagtttatcaactaaaaagacctatttgaaacttaaaggactaacttgggaatactgtcaaactaaaa 27893102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 41265229 - 41265295
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaa 228  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||||||| |||||||||||||    
T  41265229 tgaaatagtttatcaactaaaatgacttatttgaaacttaaaggactaacttgagaattctgtcaaa 41265295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 20535938 - 20536014
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgat 238  Q
    |||||||||||||||||||| |  |||||||||||||||||| | |||||||| ||||| |||||||||||||||||    
T  20535938 tgaaatagtttatcaactaacaagacttatttgaaacttaaaagactaacttgagaattatgtcaaactaaaatgat 20536014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 21813285 - 21813213
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||||||||||| || | ||||||||||||||| |||||||| ||||||| |||||||||||    
T  21813285 tgaaatagtttatcaactaaaaggacctttttgaaacttaaaggactaacttgagaattctatcaaactaaaa 21813213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 234
Target Start/End: Original strand, 27893464 - 27893617
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    ||||||||||||||| | | |||||||| | |||  ||||||||||||||||| || ||||| || |||   ||||||||||||||||||||||  |  |    
T  27893464 ttttgatccaagtcaacaatttaacggctacatcaacatcagttaaacggagactgacaacagggttaacgatgaaatagtttatcaactaaaatgatct 27893563  T
Q  190 atttg---------aaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||         ||||||||||| ||||||||||||||||||||||||||||    
T  27893564 atttgaaacttttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 27893617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 42117017 - 42116909
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    ||||||||| || ||||||||||||| |||||  ||||||  || | |||||||| |||| || ||||| ||| || ||||||||||||||||||| |||    
T  42117017 gtctttctagccctataaatgatcatttgtgactattaaatgcagcattttgacatcctggagtctttataacgtaatgttttgatccaagtcagcaact 42116918  T
Q  111 taacggcca 119  Q
    |||||||||    
T  42116917 taacggcca 42116909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 19080928 - 19080693
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    ||||||||| |  ||||||||||||| ||||||||||||||| | | ||||||||||||  ||  |||||||   ||| |||||||||| |||| | |||    
T  19080928 gtctttctagcactataaatgatcatttgtgatcattaaacatagcattttgacaccctcgagcttttaaaagacagtattttgatccatgtcaacaact 19080829  T
Q  111 taacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactta---------tttgaaactta 201  Q
    ||||||  | |||  ||||| |||||||||||  | ||  | |  |||   ||||||||||||||||||||||| || ||         |||||||||||    
T  19080828 taacggttacatcaacatcaattaaacggagaccgacagtaggagtaacggtgaaatagtttatcaactaaaaggacctatatgaaacttttgaaactta 19080729  T
Q  202 aaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    || ||||||||||  |||||||||||||||||||||    
T  19080728 aatgtctaacttgaaaattctgtcaaactaaaatga 19080693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 34336145 - 34336099
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  34336145 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaatga 34336099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 200
Target Start/End: Original strand, 15506376 - 15506518
Alignment:
Q  58 ttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggata 157  Q
    ||||||||||||| ||| |||||||| ||||||||||||| |||||| | | |||||||| | |||  ||||||||||      |||| || ||  ||||    
T  15506376 ttttgacaccctggagattttaaaacatagtgttttgatcaaagtcaacaatttaacggctacatcaacatcagttaattattaattgacagcagagata 15506475  T
Q  158 atattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||  ||||||||||||||||||||||| || ||||| ||||||    
T  15506476 atggtgaaatagtttatcaactaaaaggacatatttaaaactt 15506518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 39376312 - 39376236
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||||||||||||  |||||||||||| ||||| | ||||||| ||||||| || ||||||||| ||||    
T  39376312 tgaaatagtttatcaactaaaaagacttatttgaaatttaaa-gactaacttaggaattccgtaaaactaaaaggatc 39376236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 31264035 - 31263992
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| |||||||| |||||||||||||||||||    
T  31264035 tttgaaacttaaaggactaacttgagaattctgtcaaactaaaa 31263992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 37543057 - 37543011
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  37543057 tttgaaacttaaaggactaacttggaaattatgtcaaactaaaatga 37543011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 242
Target Start/End: Complemental strand, 8260432 - 8260384
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaa 242  Q
    |||||||||||| |||| ||| ||||||||| |||||||||||||||||    
T  8260432 gaaacttaaaggactaatttgagaattctgtaaaactaaaatgatcaaa 8260384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 39301808 - 39301880
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||||||||||   | ||||||||||||||||   ||||||   ||||||||||||||||||    
T  39301808 tgaaatagtttatcaactaaaatggcctatttgaaacttaaagaaataacttaaaaattctgtcaaactaaaa 39301880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 30907184 - 30907141
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  30907184 tttgaaacttaaaggactaacttgagaattatgtcaaactaaaa 30907141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 243
Target Start/End: Original strand, 16781133 - 16781175
Alignment:
Q  201 aaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||| |||||||| |||||||||||||||||||||| |||||    
T  16781133 aaaggactaacttgagaattctgtcaaactaaaatgaccaaaa 16781175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 31264134 - 31264172
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  31264134 tgaaatagtttatcaactaaaaggacctatttgaaactt 31264172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 11871764 - 11871805
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaa 232  Q
    ||||||||||||||| |||||| | |||||||||||||||||    
T  11871764 tttgaaacttaaaggactaactcgagaattctgtcaaactaa 11871805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 243
Target Start/End: Original strand, 13315808 - 13315853
Alignment:
Q  198 cttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||| ||||||||| |||| ||||||||||||| ||||||||    
T  13315808 cttaaaggactaacttggaaattatgtcaaactaaaaggatcaaaa 13315853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 243
Target Start/End: Complemental strand, 16780990 - 16780937
Alignment:
Q  190 atttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||||||| ||||||||  ||||||||| || ||||| ||||||||    
T  16780990 atttgaaacttaaaggactaacttgaaaattctgtcgaattaaaaggatcaaaa 16780937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 27893637 - 27893686
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| |||||||| ||||| ||||||||||||| || |||||    
T  27893637 gaaacttaaaggactaacttgagaattttgtcaaactaaaaggaccaaaa 27893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 31263972 - 31263923
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||  |||||||| |||||||||||||||||| || |||||    
T  31263972 gaaacttaaaggattaacttggaaattctgtcaaactaaaaagaccaaaa 31263923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 31264095 - 31264058
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaa 228  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  31264095 tttgaaacttaaagtactaacttgggaattctgtcaaa 31264058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 237
Target Start/End: Complemental strand, 37543091 - 37543062
Alignment:
Q  208 taacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||||||||||||||||||    
T  37543091 taacttgggaattctgtcaaactaaaatga 37543062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 30907121 - 30907081
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||| | |||||||| |||||||||||||||||||    
T  30907121 gaaacttaaaagactaacttgagaattctgtcaaactaaaa 30907081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 30907244 - 30907196
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||||| | |||||||||||||| |||||| |||||| ||||    
T  30907244 tttgaaacttaaatgactaacttgggaattatgtcaatctaaaaggatc 30907196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Complemental strand, 34429728 - 34429688
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  34429728 gaaatttaaaggactaacttgagaattctgtcaaactaaaa 34429688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 39376420 - 39376456
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaa 227  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  39376420 tttgaaacttaaaggactaacttggaaattctgtcaa 39376456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 200
Target Start/End: Original strand, 16434 - 16620
Alignment:
Q  13 ctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgactta 112  Q
    ||||||| |||||||||||||||| |||||  |||||| ||| |||| ||||  |||| || |||| ||||  |  |||||||||| ||||||| |||||    
T  16434 ctttctagccttataaatgatcatttgtgactattaaaaacaacgttatgactacctggagcctttgaaactcatcgttttgatcctagtcagcaactta 16533  T
Q  113 acggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||||  || | ||||||| |||||||| || ||||| ||||||   ||||||||||||||||||||||  |||||||| ||||||    
T  16534 acggccac-tcagtatcagtttaacggagactgacaacagggataactgtgaaatagtttatcaactaaaatgacttatttaaaactt 16620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 200
Target Start/End: Complemental strand, 16398 - 16224
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    ||||||||||||| | ||| |||||||| ||  |||||||||||||  | ||||||||||    |||||||||| |||||||| || ||||| ||| |||    
T  16398 tataaatgatcatttctgaccattaaacgcaaagttttgacaccctagacactttaaaacgcgttgttttgatcgaagtcagcaacctaacgaccacatc 16299  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
      ||| ||||||||||||| ||  | || || |||   ||||||||||||||||||||||  || ||||| ||||||    
T  16298 atcattagttaaacggagactg--agcaggggtaacggtgaaatagtttatcaactaaaatgacctatttaaaactt 16224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 16124 - 16072
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||| | |||||||  ||||| ||| ||||||||||||||||||    
T  16124 tttgaaacttaaaagactaacttaagaattttgtgaaactaaaatgatcaaaa 16072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 9672 - 9462
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    ||||||||||||| ||||| ||||||||  | ||||||||||||||  ||  |||||||   | | |||||||| |||||| | |||||||  | | |||    
T  9672 tataaatgatcatttgtgaccattaaacgtagcgttttgacaccctcgagcttttaaaaggcaatattttgatcaaagtcaacaacttaacaactacatc 9573  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctg 223  Q
      ||| ||||||||||||| ||  | || || ||| | ||||||||||||||||||||||| || ||||||||||||||||  |||||||| |||||||     
T  9572 aacattagttaaacggagactgatagcaggggtaacagtgaaatagtttatcaactaaaaggacctatttgaaacttaaagaactaacttgagaattcta 9473  T
Q  224 tcaaactaaaa 234  Q
    | |||||||||    
T  9472 ttaaactaaaa 9462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 9949 - 9989
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||  |||||||| |||||||||||||||||||    
T  9949 gaaacttaaagaactaacttgagaattctgtcaaactaaaa 9989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 5e-22; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 239
Target Start/End: Complemental strand, 26275644 - 26275567
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||| |||||||||||||| |||||||||||| || | ||||||||||||||| |||||||||||||||||    
T  26275644 tgaaatagtttgtcaactaaaagaacctatttgaaacttgaatgactaacttgggaattccgtcaaactaaaatgatc 26275567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 26275983 - 26276064
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||| |||||||||||||| || ||||||||||||||||| ||||||||| |||| ||||||||||||| ||||||||    
T  26275983 tgaaatagcttatcaactaaaaggacatatttgaaacttaaaggactaacttggaaattttgtcaaactaaaaggatcaaaa 26276064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 200
Target Start/End: Complemental strand, 20728827 - 20728639
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    ||||||||| |  ||||||||||||| ||||| ||||||||| |  |||||||||| ||| ||  |||||||   || |||||||||||||||| | |||    
T  20728827 gtctttctagcactataaatgatcatttgtgaccattaaacatagtgttttgacactctggagcttttaaaagacagcgttttgatccaagtca-caact 20728729  T
Q  111 taacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||| | | | ||| |||||||||||||||||| || ||| |||| |||   ||||||||||| ||||||||||  || ||||||||||||    
T  20728728 taatgactacatcagcatcagttaaacggagactgacaataagggtaacggtgaaatagtttttcaactaaaaagacatatttgaaactt 20728639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 35190053 - 35189978
Alignment:
Q  162 tgaaatagtttatcaactaaaa-gaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    |||||||||||||||||||||| || ||| ||||||||||||||| ||||||||||| |||||||||||||||||||    
T  35190053 tgaaatagtttatcaactaaaatgatctt-tttgaaacttaaaggactaacttgggagttctgtcaaactaaaatga 35189978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 58 - 234
Target Start/End: Complemental strand, 38082800 - 38082624
Alignment:
Q  58 ttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggata 157  Q
    |||||||||||||||| ||||||||   || |||||||||||||| |   | ||||| |||| |||  |||||||||||   ||| || |||||  | ||    
T  38082800 ttttgacaccctgaagcctttaaaatgaagcgttttgatccaagtgaataatttaacagccacatcaacatcagttaaatcaagactgacaacagtggta 38082701  T
Q  158 atattgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||| ||||||||||||||||||||||  || ||||| ||| ||||| | |||||||| ||||||||| |||||||||    
T  38082700 atagtgaaatagtttatcaactaaaatgacctatttaaaatttaaaagactaacttgagaattctgtgaaactaaaa 38082624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 197
Target Start/End: Complemental strand, 19278991 - 19278818
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgacttaacggccaaatc 123  Q
    ||||||||||||| |||||| |||||||  | |||||||||| |||| |   |||||||   |  |||||||||||||||| | |||||||| | | |||    
T  19278991 tataaatgatcatttgtgataattaaacgtagcgttttgacatcctggaacttttaaaagacaacgttttgatccaagtcaacaacttaacgacgacatc 19278892  T
Q  124 ggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatttgaaa 197  Q
     |||||||||||| ||||| |  ||||| || ||| | ||||||||||||||||||||||  | ||||||||||    
T  19278891 agcatcagttaaaaggagactaacaacatgggtaacagtgaaatagtttatcaactaaaatgatttatttgaaa 19278818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 234
Target Start/End: Complemental strand, 36418026 - 36417954
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||| ||||||||||||||| || ||||||||||||||||| |||||||| ||||| |||||||| ||||    
T  36418026 tgaaataatttatcaactaaaaggacctatttgaaacttaaaggactaacttgagaattatgtcaaaccaaaa 36417954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 18951354 - 18951311
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18951354 tttgaaacttaaaggactaacttgggaattctgtcaaactaaaa 18951311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 35890989 - 35890894
Alignment:
Q  88 tgttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaa 183  Q
    ||||||||| ||||||| | |||||||||||| ||   ||||||||||||||||| || |||||  |||||   ||||||||||||||||||||||    
T  35890989 tgttttgattcaagtcaacaacttaacggccacattaacatcagttaaacggagactgacaacagcgataacggtgaaatagtttatcaactaaaa 35890894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 32660370 - 32660324
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  32660370 tttgaaacttaaaggactaacttaggaattctgtcaaactaaaatga 32660324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 31813953 - 31813998
Alignment:
Q  189 tatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||    
T  31813953 tatttgaaacttaaatgactaacttgggaattctgtcaaactaaaa 31813998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 38405522 - 38405594
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||||||||||| || ||||| ||||||||||| ||   ||| |||||||| |||||||||||||    
T  38405522 tgaaatagtttatcaactaaaaggacatatttaaaacttaaaggact---ttgagaattctgccaaactaaaatga 38405594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 32459757 - 32459865
Alignment:
Q  89 gttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaact 188  Q
    |||| ||||||||| ||  | |||||||||| |||   |||||||||||||||| || |||||| | ||| | |||||||||||||| |||||||| ||     
T  32459757 gtttcgatccaagttagtaatttaacggccacatcaatatcagttaaacggagactgacaacaatggtaacagtgaaatagtttatcgactaaaaggacc 32459856  T
Q  189 tatttgaaa 197  Q
    |||||||||    
T  32459857 tatttgaaa 32459865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 6336254 - 6336208
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatga 237  Q
    ||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  6336254 tttgaaacttaaaggactaacttggaaattctttcaaactaaaatga 6336208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 20728576 - 20728527
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||||| ||||||||| |||||||||||||||||| || |||||    
T  20728576 gaaacttaaaggactaacttggaaattctgtcaaactaaaaagaccaaaa 20728527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 19278756 - 19278704
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||| ||||||| |||||||  ||||||||||||||||||| ||||||||    
T  19278756 tttgaaatttaaaggactaacttaagaattctgtcaaactaaaaggatcaaaa 19278704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 35891274 - 35891326
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||||| ||||||||  |||| ||||||||||||| ||||||||    
T  35891274 tttgaaacttaaaggactaacttgaaaattatgtcaaactaaaaggatcaaaa 35891326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 6336194 - 6336151
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||||    
T  6336194 tttgaaacttaaaggactaacttggaaattctgccaaactaaaa 6336151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 13543577 - 13543615
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    |||||||||||||||| ||||||||| ||||||||||||    
T  13543577 tgaaatagtttatcaagtaaaagaacctatttgaaactt 13543615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 200
Target Start/End: Complemental strand, 18238073 - 18237963
Alignment:
Q  90 ttttgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaactt 189  Q
    |||| |||||||||| | |||||||  ||| |||  |||| |||||||| |||  | ||||| || ||| | ||||||| ||||||||||||||| ||||    
T  18238073 ttttcatccaagtcatcaacttaacaaccacatcaacatctgttaaacgaagaccgacaacatgggtaacagtgaaatattttatcaactaaaaggactt 18237974  T
Q  190 atttgaaactt 200  Q
    |||| ||||||    
T  18237973 atttaaaactt 18237963  T

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Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 18238128 - 18238082
Alignment:
Q  24 tataaatgatcatctgtgatcattaaacacatcgttttgacaccctg 70  Q
    ||||||||||||| ||||||||||||||  | |||||||||||||||    
T  18238128 tataaatgatcatttgtgatcattaaacgtaacgttttgacaccctg 18238082  T

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Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 20729019 - 20729057
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  20729019 tgaaatagtttatcaactaaaaggacctatttgaaactt 20729057  T

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Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 35891236 - 35891274
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  35891236 tgaaatagtttatcaacaaaaaaaacttatttgaaactt 35891274  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 200
Target Start/End: Original strand, 36418375 - 36418413
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaactt 200  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  36418375 tgaaatagtttatcaactaaaaggacctatttgaaactt 36418413  T

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Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 203
Target Start/End: Complemental strand, 13538613 - 13538572
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaa 203  Q
    ||||||||||||||||||||||  || |||||||||||||||    
T  13538613 tgaaatagtttatcaactaaaatgacatatttgaaacttaaa 13538572  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Original strand, 38405611 - 38405660
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    |||||||||| |  ||||||||||||||||| ||||||||| ||||||||    
T  38405611 gaaacttaaatgattaacttgggaattctgtgaaactaaaaggatcaaaa 38405660  T

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Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 18238351 - 18238403
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||| | ||||||||| |||| ||||||||| ||| ||||||||    
T  18238351 tttgaaacttaaacgactaacttggaaattttgtcaaacttaaaagatcaaaa 18238403  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 18951410 - 18951366
Alignment:
Q  195 aaacttaaaggtctaacttgggaattctgtcaaactaaaatgatc 239  Q
    ||||||||||| |||||||| ||||||| ||||||||||| ||||    
T  18951410 aaacttaaaggactaacttgagaattctatcaaactaaaaggatc 18951366  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 32459478 - 32459426
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||| | |||||||| ||||| ||||||||||||| || |||||    
T  32459478 tttgaaacttaaatgactaacttgtgaattttgtcaaactaaaaggaccaaaa 32459426  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 119
Target Start/End: Complemental strand, 32459658 - 32459550
Alignment:
Q  11 gtctttctaaccttataaatgatcatctgtgatcattaaacacatcgttttgacaccctgaagactttaaaacctagtgttttgatccaagtcagcgact 110  Q
    |||||| || || ||||||| || || ||||| |||||||  ||  |||||||||| ||| || ||||||||  ||| ||||||||| ||| |||| |||    
T  32459658 gtctttttagccatataaattattatttgtgaccattaaatgcagagttttgacacactggagcctttaaaatgtagcgttttgatctaaggcagcaact 32459559  T
Q  111 taacggcca 119  Q
    |||||||||    
T  32459558 taacggcca 32459550  T

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Target: scaffold0746 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 441 - 548
Alignment:
Q  93 tgatccaagtcagcgacttaacggccaaatcggcatcagttaaacggagattggcaacaaggataatattgaaatagtttatcaactaaaagaacttatt 192  Q
    |||||||||||| | |||||||||| | |||||||| ||||||||||| |||| |  || || ||| | ||||||||||||||||||||||  || ||||    
T  441 tgatccaagtcaacaacttaacggctacatcggcattagttaaacggatattgacggcaggggtaacagtgaaatagtttatcaactaaaatgacctatt 540  T
Q  193 tgaaactt 200  Q
    ||||||||    
T  541 tgaaactt 548  T

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Target: scaffold0070 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 162 - 234
Target Start/End: Original strand, 29034 - 29105
Alignment:
Q  162 tgaaatagtttatcaactaaaagaacttatttgaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    ||||||| ||||||||||||||  || ||||||||||||||| | ||||||| ||||||| ||||||||||||    
T  29034 tgaaataatttatcaactaaaatgacatatttgaaacttaaa-gactaacttaggaattcggtcaaactaaaa 29105  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 191 - 243
Target Start/End: Complemental strand, 124194 - 124142
Alignment:
Q  191 tttgaaacttaaaggtctaacttgggaattctgtcaaactaaaatgatcaaaa 243  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| || |||||    
T  124194 tttgaaacttaaaggactaacttgggaattttgtcaaactaaaaggaccaaaa 124142  T

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Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 124373 - 124413
Alignment:
Q  194 gaaacttaaaggtctaacttgggaattctgtcaaactaaaa 234  Q
    |||||||||||| ||||||||| ||||||||||||||||||    
T  124373 gaaacttaaaggactaacttggaaattctgtcaaactaaaa 124413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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