View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11399_low_2 (Length: 431)

Name: NF11399_low_2
Description: NF11399
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11399_low_2
NF11399_low_2
[»] chr8 (18 HSPs)
chr8 (7-413)||(23283456-23283864)
chr8 (4-413)||(23394674-23395069)
chr8 (216-353)||(37251109-37251246)
chr8 (216-353)||(16313193-16313330)
chr8 (216-353)||(34800821-34800958)
chr8 (249-399)||(357537-357686)
chr8 (281-349)||(41528225-41528293)
chr8 (231-295)||(17871244-17871310)
chr8 (227-351)||(19263309-19263434)
chr8 (245-348)||(45528216-45528319)
chr8 (328-395)||(12159322-12159388)
chr8 (320-395)||(19223210-19223285)
chr8 (321-399)||(45245079-45245157)
chr8 (223-316)||(14373889-14373982)
chr8 (216-353)||(16249983-16250120)
chr8 (222-316)||(18431549-18431645)
chr8 (244-313)||(43215543-43215612)
chr8 (216-268)||(23525229-23525281)
[»] chr2 (10 HSPs)
chr2 (224-399)||(13439258-13439435)
chr2 (143-353)||(25546864-25547076)
chr2 (244-399)||(24967974-24968128)
chr2 (229-314)||(29651783-29651870)
chr2 (245-399)||(20444127-20444281)
chr2 (229-368)||(29977294-29977435)
chr2 (281-349)||(31967054-31967122)
chr2 (227-351)||(6909645-6909770)
chr2 (244-313)||(45661124-45661193)
chr2 (259-351)||(6466954-6467046)
[»] chr1 (9 HSPs)
chr1 (229-399)||(47783158-47783330)
chr1 (216-353)||(17006437-17006574)
chr1 (216-351)||(34159517-34159652)
chr1 (234-399)||(19065657-19065823)
chr1 (234-399)||(19113547-19113713)
chr1 (281-349)||(45919435-45919503)
chr1 (244-399)||(7844522-7844676)
chr1 (222-351)||(16853615-16853744)
chr1 (281-349)||(49880585-49880653)
[»] chr4 (15 HSPs)
chr4 (233-399)||(11793303-11793472)
chr4 (216-353)||(55050035-55050172)
chr4 (244-353)||(24180627-24180736)
chr4 (226-399)||(35695051-35695225)
chr4 (222-351)||(42756772-42756903)
chr4 (223-296)||(50158194-50158269)
chr4 (244-399)||(17675190-17675344)
chr4 (244-399)||(56340297-56340451)
chr4 (281-349)||(313125-313193)
chr4 (281-345)||(3773441-3773505)
chr4 (297-353)||(4280400-4280456)
chr4 (281-349)||(6553342-6553410)
chr4 (222-353)||(26289942-26290073)
chr4 (223-304)||(24183423-24183505)
chr4 (223-304)||(28475632-28475714)
[»] chr7 (7 HSPs)
chr7 (255-400)||(26412677-26412822)
chr7 (224-353)||(29912589-29912718)
chr7 (223-304)||(38788940-38789022)
chr7 (280-351)||(36838051-36838122)
chr7 (243-313)||(6202345-6202415)
chr7 (284-353)||(26247386-26247455)
chr7 (281-397)||(29865894-29866010)
[»] chr6 (11 HSPs)
chr6 (231-352)||(31737165-31737288)
chr6 (224-399)||(9452769-9452946)
chr6 (216-353)||(23410033-23410170)
chr6 (287-390)||(18089904-18090007)
chr6 (245-399)||(4791531-4791684)
chr6 (245-353)||(24359566-24359674)
chr6 (229-306)||(4031542-4031619)
chr6 (216-353)||(20872474-20872610)
chr6 (328-399)||(16705723-16705794)
chr6 (281-351)||(15600247-15600317)
chr6 (261-390)||(24175782-24175911)
[»] scaffold0268 (1 HSPs)
scaffold0268 (216-353)||(19807-19944)
[»] chr5 (6 HSPs)
chr5 (216-353)||(4062149-4062286)
chr5 (216-353)||(7332880-7333017)
chr5 (216-353)||(8128377-8128514)
chr5 (245-399)||(7928620-7928773)
chr5 (281-369)||(19320286-19320373)
chr5 (225-353)||(29865818-29865946)
[»] chr3 (9 HSPs)
chr3 (216-353)||(19817349-19817486)
chr3 (229-399)||(14044292-14044463)
chr3 (229-399)||(40056528-40056699)
chr3 (320-395)||(53001-53076)
chr3 (224-316)||(12125486-12125580)
chr3 (245-399)||(34854249-34854402)
chr3 (321-399)||(39183160-39183238)
chr3 (244-313)||(9265298-9265367)
chr3 (287-351)||(14249225-14249289)
[»] scaffold0012 (1 HSPs)
scaffold0012 (216-344)||(30977-31105)
[»] scaffold0050 (1 HSPs)
scaffold0050 (223-313)||(11600-11687)
[»] scaffold0284 (3 HSPs)
scaffold0284 (281-349)||(2053-2121)
scaffold0284 (230-316)||(6413-6501)
scaffold0284 (229-351)||(7544-7668)
[»] scaffold0216 (1 HSPs)
scaffold0216 (222-315)||(29157-29252)
[»] scaffold0211 (1 HSPs)
scaffold0211 (281-349)||(19669-19737)
[»] scaffold1743 (1 HSPs)
scaffold1743 (227-351)||(193-318)
[»] scaffold0002 (1 HSPs)
scaffold0002 (249-351)||(95699-95801)
[»] scaffold0061 (2 HSPs)
scaffold0061 (281-390)||(44842-44951)
scaffold0061 (284-348)||(45609-45673)
[»] scaffold0017 (2 HSPs)
scaffold0017 (281-390)||(153836-153945)
scaffold0017 (284-348)||(153114-153178)
[»] scaffold0191 (1 HSPs)
scaffold0191 (287-351)||(11646-11710)
[»] scaffold0169 (1 HSPs)
scaffold0169 (259-351)||(5157-5249)
[»] scaffold0114 (1 HSPs)
scaffold0114 (281-349)||(35462-35530)


Alignment Details
Target: chr8 (Bit Score: 386; Significance: 0; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 7 - 413
Target Start/End: Original strand, 23283456 - 23283864
Alignment:
Q  7 tcatgcacggactataattttgtcatccttagaatattgggtgaaaatgtc--atcattcttattgtgtggttgctctttgtccaatggattaatcccat 104  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  23283456 tcatgcacggactataattttgtcatccttagaatattaggtgaaaatgtcgtatcattcttattgtgtggttgctctttgtccaatggattaatcccac 23283555  T
Q  105 cgaaatgttggttctccaataaggtccagtgatgaaatcatatcccagtttgattttgtggggaaggaggagtggttctaggtggtagattgcggatgcg 204  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23283556 agaaatgttggttctccaataaggtccagtgatgaaatcatatcccagtttgattttgtggggaaggaggagtggttctaggtggtagattgcggatgcg 23283655  T
Q  205 aagaattttaaacttgcgggagaaatgttaatgtgtcaagtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatga 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23283656 aagaattttaaacttgcgggagaaatgttaatgtgtcaagtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatga 23283755  T
Q  305 ccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaattagaa 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23283756 ccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaattagaa 23283855  T
Q  405 actccgaaa 413  Q
    |||||||||    
T  23283856 actccgaaa 23283864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 4 - 413
Target Start/End: Complemental strand, 23395069 - 23394674
Alignment:
Q  4 gagtcatgcacggactataattttgtcatccttagaatattgggtgaaaatgtc--atcattcttattgtgtggttgctctttgtccaatggattaatcc 101  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||    
T  23395069 gagtcatgcacggacgataattttgtcatccttagaatattaggtgaaaatgttgtatcattcttattgtgtggttgctctttgtccaatggattaatcc 23394970  T
Q  102 catcgaaatgttggttctccaataaggtccagtgatgaaatcatatcccagtttgattttgtggggaaggaggagtggttctaggtggtagattgcggat 201  Q
    ||  ||||||||                |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  23394969 cacagaaatgtt----------------ccagtgatgaaatcatatcccagtttgattttgtagggaaggaggagtggttctaggtggtagatcgcggat 23394886  T
Q  202 gcgaagaattttaaacttgcgggagaaatgttaatgtgtcaagtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgata 301  Q
    ||||||||||| |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  23394885 gcgaagaatttcaaactttcgggagaaatgttgatgtgtcaagtgagttaaaatttcacattggatgcaagagcaaatattgagcaatatataaatgata 23394786  T
Q  302 tgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaatta 401  Q
    ||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23394785 tgaccgatatacctaataccttaatgtttagggtgaagatctggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaatta 23394686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 37251246 - 37251109
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| |||||||||||||||||||||||||  |||||||||  |||||||||||  |||| | |||||||| ||||||||| || ||||| | ||| ||    
T  37251246 acttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatattgagtaacatataagtgttatgatccatacac 37251149  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||||||||    
T  37251148 ctaatttcataaggtttggggtgaagatgtgttgtcaaac 37251109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 16313330 - 16313193
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| ||||||||||||||||||||||||  |||||||||  ||||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  16313330 acttgagggagaaatgttaatgtgtcaagtgcgagttaaag--tcacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 16313233  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||| ||||    
T  16313232 ctaatttcataaggtttggggtgaagatgtgttgttaaac 16313193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 34800821 - 34800958
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| ||||||||||||||||||||||||  |||||||||  ||||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  34800821 acttgagggagaaatgttaatgtgtcaagtgcgagttaaag--tcacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 34800918  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||| ||||    
T  34800919 ctaatttcataaggtttggggtgaagatgtgttgttaaac 34800958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 249 - 399
Target Start/End: Original strand, 357537 - 357686
Alignment:
Q  249 ttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgt 348  Q
    ||||||||||||||||||||| | || |||| |||| ||| |||||| |||||||||  |||||  || |  ||||| ||||| | |||||||||||| |    
T  357537 ttaaagtttcacattggatgcaatagtaaatgttgaacaatatataagtgatatgactcatata-ttaatgacttaaggtttaagatgaagatgtggttt 357635  T
Q  349 caaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||| ||  ||||||| |||| ||| | |||  |||||||||||||||||    
T  357636 caaactcacttgtgtggtttattttaatctaacgtgatgatcaaactcaat 357686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 41528293 - 41528225
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtc 349  Q
    |||| |||||||||||| |||||||  ||||||||| ||| ||||  ||||||||||||||||||||||    
T  41528293 ttgaacaacatataaattatatgactcatatacctactactttaagctttagggtgaagatgtggtgtc 41528225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 295
Target Start/End: Original strand, 17871244 - 17871310
Alignment:
Q  231 gttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataa 295  Q
    ||||||||||||||||  ||||||||||| |||||| |||  |||| ||||||||||||||||||||    
T  17871244 gttaatgtgtcaagtgtgagttaaagttttacattgaatgtaagagtaaatattgagcaacatataa 17871310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 351
Target Start/End: Complemental strand, 19263434 - 19263309
Alignment:
Q  227 aaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattacctta 324  Q
    ||||||||||||||||||||  |||||| || || |||||||||| |||| ||   |||| ||||| |||| |||||||||  ||||||||| |  ||||    
T  19263434 aaatgttaatgtgtcaagtgtgagttaa-gtctcgcattggatgcaagagtaaccgttgaacaacaaataagtgatatgactcatatacctaatgtctta 19263336  T
Q  325 atgtttagggtgaagatgtggtgtcaa 351  Q
    | ||||||| || ||||||||||||||    
T  19263335 aggtttaggatggagatgtggtgtcaa 19263309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 245 - 348
Target Start/End: Original strand, 45528216 - 45528319
Alignment:
Q  245 tgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtg 344  Q
    ||||||||| ||  || ||||||||  ||| | |||||||||||||||||||||| ||||| |||||||||| |  |||||  ||| |||||||||| ||    
T  45528216 tgagttaaatttcaacgttggatgcacgagtatatattgagcaacatataaatgagatgacaaatatacctaatgtcttaagattttgggtgaagatttg 45528315  T
Q  345 gtgt 348  Q
    ||||    
T  45528316 gtgt 45528319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 395
Target Start/End: Original strand, 12159322 - 12159388
Alignment:
Q  328 tttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaact 395  Q
    ||||||||||| |||||||||||||  ||  ||||| |||| ||||||| ||||||||||||||||||    
T  12159322 tttagggtgaa-atgtggtgtcaaaatcacttgtgttgattctcttagtctaatatgatgatcaaact 12159388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 395
Target Start/End: Complemental strand, 19223285 - 19223210
Alignment:
Q  320 ccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaact 395  Q
    ||||||| ||||||||||| || ||||||||||  ||  |||||  ||| ||||||| ||||||||||||||||||    
T  19223285 ccttaatttttagggtgaaaatatggtgtcaaaatcacttgtgtttattctcttagtgtaatatgatgatcaaact 19223210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 399
Target Start/End: Original strand, 45245079 - 45245157
Alignment:
Q  321 cttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||| ||||| ||||||||||||||||||||| ||  ||||||| || | ||| | |||  |||||||||||||||||    
T  45245079 cttaaggtttaaggtgaagatgtggtgtcaaactcacttgtgtggtttcttttaatctaacgtgatgatcaaactcaat 45245157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 316
Target Start/End: Original strand, 14373889 - 14373982
Alignment:
Q  223 ggagaaatgttaatgtgtcaagtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatataccta 316  Q
    |||| |||||||||||||||||||||||||| ||| | |||||||   |||| | || |||||||  || ||| ||| |||||| |||||||||    
T  14373889 ggagtaatgttaatgtgtcaagtgagttaaaattttaaattggatataagaggagatgttgagcactatgtaagtgagatgacccatataccta 14373982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 16250120 - 16249983
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| || |||||||||||||||||||||  ||| |||||  ||||||||||||  |||| | || ||||| ||||||||| |  ||||| | ||||||    
T  16250120 acttgaggaagaaatgttaatgtgtcaagtgcgagataaag--tcacattggatgtaagagtagatgttgagtaacatataagtattatgatccatatac 16250023  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||| ||||    
T  16250022 ctaatttcataaggtttggggtgaagatgtgttgttaaac 16249983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 316
Target Start/End: Complemental strand, 18431645 - 18431549
Alignment:
Q  222 gggagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatataccta 316  Q
    |||||| |||||||||||||| |||  ||||||| ||  |  || ||||| |||| | |||||||||||||||||  ||| ||||||||||||||||    
T  18431645 gggagagatgttaatgtgtcatgtgtgagttaaacttctaattttgatgcaagagtatatattgagcaacatatatttgagatgaccaatataccta 18431549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 43215612 - 43215543
Alignment:
Q  244 gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    |||||||||  ||| ||||| ||||| |||| ||||||| |||||||||||| ||| ||| |||||||||    
T  43215612 gtgagttaaccttttacatttgatgcaagagtaaatattaagcaacatataagtgagatgtccaatatac 43215543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 23525229 - 23525281
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatg 268  Q
    ||||| ||||||||||||||||||||||||  |||||||||  ||||||||||||    
T  23525229 acttgagggagaaatgttaatgtgtcaagtgcgagttaaag--tcacattggatg 23525281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 224 - 399
Target Start/End: Complemental strand, 13439435 - 13439258
Alignment:
Q  224 gagaaatgttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattacc 321  Q
    ||||||| | ||||||||||  |||| ||||||||||||| |||||    ||||| || ||||||||||||||| |||| ||||  ||||||| |  |||    
T  13439435 gagaaatatcaatgtgtcaaatgtgaattaaagtttcacactggataaaggagcagatgttgagcaacatataagtgatgtgactcatatacccagcacc 13439336  T
Q  322 ttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||| ||||||||||||| |||||||||||||| ||  ||| |||||| ||||||| |||| |||||||||||||||||    
T  13439335 ttattgtttagggtgaaaatgtggtgtcaaactcacttgtatggattctcttagtctaatgtgatgatcaaactcaat 13439258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 143 - 353
Target Start/End: Original strand, 25546864 - 25547076
Alignment:
Q  143 catatcccagtttgattttgtggggaaggaggagtggtt-ctaggtggtagattgcggatgcgaagaattttaaacttgcgggagaaatgttaatgtgtc 241  Q
    |||| ||||||| || |||||| ||||| | |||||||| |||| ||||||||| | |||| ||| | | | | ||||| ||| |||||| |||||||||    
T  25546864 catagcccagttcgactttgtgaggaagtacgagtggtttctag-tggtagatttcagatgtgaaaagtatcatacttgtgggtgaaatggtaatgtgtc 25546962  T
Q  242 aa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaag 339  Q
    ||  |||||||||||||  ||||||||||| ||| || || ||||  ||||||||| |||||||| | |||||| || |||||||||||||| |||||||    
T  25546963 aaatgtgagttaaagttctacattggatgcaagaacatatgttgaaaaacatataagtgatatgaactatatacataataccttaatgtttatggtgaag 25547062  T
Q  340 atgtggtgtcaaac 353  Q
    || |||||||||||    
T  25547063 atatggtgtcaaac 25547076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 399
Target Start/End: Original strand, 24967974 - 24968128
Alignment:
Q  244 gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgt 343  Q
    |||| |||||||| |||||||||||| | |  | || |||| |||||||||| |||||| ||| |||||  || |  ||||| |||||||||||||||||    
T  24967974 gtgatttaaagttccacattggatgcaataatagatgttgaacaacatataagtgatataacccatata-ttaatgacttaaggtttagggtgaagatgt 24968072  T
Q  344 ggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    |||||||||| ||  ||||||| || | ||| | |||  |||||||||||||||||    
T  24968073 ggtgtcaaactcacttgtgtggtttcttttaatctaacgtgatgatcaaactcaat 24968128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 314
Target Start/End: Original strand, 29651783 - 29651870
Alignment:
Q  229 atgttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacc 314  Q
    |||||||||||||||  ||||||||||||||||||||| |||| |||| | || |||| |||||| ||| |||||||| | |||||||    
T  29651783 atgttaatgtgtcaaatgtgagttaaagtttcacattgaatgcaagagtagatgttgaacaacatctaagtgatatgatccatatacc 29651870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 399
Target Start/End: Original strand, 20444127 - 20444281
Alignment:
Q  245 tgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtg 344  Q
    ||||||||||||||| ||||||||  | |  | || |||||  ||| |||| |||||||||  ||||||||| | |||||| ||||||| ||||||| ||    
T  20444127 tgagttaaagtttcatattggatgtaaaaatatatgttgagtgacacataagtgatatgactcatatacctaatgccttaaggtttaggatgaagatatg 20444226  T
Q  345 gtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||||||| ||  |  ||||||| ||||| | |||| | ||||||||| |||||    
T  20444227 gtgtcaaactcacttaagtggattctcttactctaatgtaatgatcaaattcaat 20444281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 368
Target Start/End: Complemental strand, 29977435 - 29977294
Alignment:
Q  229 atgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaat 326  Q
    ||||||||||||||||||  |||||||||| ||||||| |||| ||||   || ||||  ||||||||| |||||||||  ||||||||| |  |||||     
T  29977435 atgttaatgtgtcaagtgtaagttaaagttccacattgaatgcaagagtggatgttgataaacatataagtgatatgactcatatacctaatgtcttaag 29977336  T
Q  327 gtttagggtgaagatgtggtgtcaaacccaactgtgtggatt 368  Q
    || || | ||||||| |||||| |||| ||  ||||||||||    
T  29977335 gtctatgatgaagatttggtgtaaaactcacttgtgtggatt 29977294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 31967122 - 31967054
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtc 349  Q
    |||| |||||||||| | |||||||  ||||||||| ||| ||||  ||||||||||||||||||||||    
T  31967122 ttgaacaacatataagttatatgactcatatacctactactttaagctttagggtgaagatgtggtgtc 31967054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 351
Target Start/End: Original strand, 6909645 - 6909770
Alignment:
Q  227 aaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattacctta 324  Q
    |||||||||||||||||||  ||||||| |||||  ||||| ||| |||| ||   |||| ||||| ||||||||||||||  ||||||||| | || ||    
T  6909645 aaatgttaatgtgtcaagtatgagttaa-gtttcgtattggctgcaagagtaaccgttgaacaacaaataaatgatatgactcatatacctaatgcccta 6909743  T
Q  325 atgtttagggtgaagatgtggtgtcaa 351  Q
    | | |||||||  ||||||||||||||    
T  6909744 agggttagggtagagatgtggtgtcaa 6909770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 45661124 - 45661193
Alignment:
Q  244 gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    |||||||||  ||| ||||| ||||| |||| ||||||| |||||||||||| ||| ||| |||||||||    
T  45661124 gtgagttaaccttttacatttgatgcaagagtaaatattaagcaacatataagtgagatgtccaatatac 45661193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 351
Target Start/End: Original strand, 6466954 - 6467046
Alignment:
Q  259 acattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaa 351  Q
    ||||||||| | |||| | ||||||||||| |||||||||| ||||| |||||| ||| |  |||||  ||| || || ||||||||||||||    
T  6466954 acattggatccaagagtatatattgagcaagatataaatgaaatgacaaatataactaatgtcttaagtttttggatggagatgtggtgtcaa 6467046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 229 - 399
Target Start/End: Original strand, 47783158 - 47783330
Alignment:
Q  229 atgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaat 326  Q
    ||||||||||||||||||  ||||||||||||||||||| ||| |||| || | || | |||||||||| |||||||||  |||||| || | ||||||     
T  47783158 atgttaatgtgtcaagtgtgagttaaagtttcacattggctgcaagagtaattgtttaacaacatataagtgatatgactcatatacataatgccttaag 47783257  T
Q  327 gtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||||||||||||||| || |||| | ||  |||||||  ||| |||||||||| ||||||||||| |||||    
T  47783258 gtttagggtgaagatgtagtctcaatctcacttgtgtggtatatgttagtataatgtgatgatcaaaatcaat 47783330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 17006574 - 17006437
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| ||||||||||||||||||||||||  |||||||||  ||||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  17006574 acttgagggagaaatgttaatgtgtcaagtgcgagttaaag--tcacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 17006477  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| || |||||||||| ||||||||    
T  17006476 ctaatttcataaggtttgggttgaagatgtgttgtcaaac 17006437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 351
Target Start/End: Original strand, 34159517 - 34159652
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| ||||||||||||||||||||||||  |||||||||  ||||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  34159517 acttgagggagaaatgttaatgtgtcaagtgcgagttaaag--tcacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 34159614  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaa 351  Q
    ||| |  |  || |||| ||||||||||||| ||||||    
T  34159615 ctaatttcacaaggtttggggtgaagatgtgttgtcaa 34159652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 399
Target Start/End: Complemental strand, 19065823 - 19065657
Alignment:
Q  234 aatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgttta 331  Q
    |||||||||||||  | |||||||| |||||||||||| | || |||| |||| ||| |||||| |||||||||| |||||  || |  ||||| |||||    
T  19065823 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgacccatata-ttaatgacttaaggttta 19065725  T
Q  332 gggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
     | || ||||||||| |||||| ||  ||||||| |||| ||| | |||  |||||||||||||||||    
T  19065724 agatggagatgtggtttcaaactcacttgtgtggtttattttaatctaacgtgatgatcaaactcaat 19065657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 399
Target Start/End: Complemental strand, 19113713 - 19113547
Alignment:
Q  234 aatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgttta 331  Q
    |||||||||||||  | |||||||| |||||||||||| | || |||| |||| ||| |||||| |||||||||| |||||  || |  ||||| |||||    
T  19113713 aatgtgtcaagtgttatttaaagttccacattggatgcaatagtaaatgttgaacaatatataagtgatatgacccatata-ttaatgacttaaggttta 19113615  T
Q  332 gggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
     | || ||||||||| |||||| ||  ||||||| |||| ||| | |||  |||||||||||||||||    
T  19113614 agatggagatgtggtttcaaactcacttgtgtggtttattttaatctaacgtgatgatcaaactcaat 19113547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 45919503 - 45919435
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtc 349  Q
    |||| |||||||||| | |||||||  ||||||||| ||| ||||  ||||||||||||||||||||||    
T  45919503 ttgaacaacatataagttatatgactcatatacctactactttaagctttagggtgaagatgtggtgtc 45919435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 399
Target Start/End: Complemental strand, 7844676 - 7844522
Alignment:
Q  244 gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgt 343  Q
    |||| ||||||||  ||||||||||| | |  | || |||| |||||||||| |||||| ||| |||||   || || |||| |||||| ||||||||||    
T  7844676 gtgatttaaagttctacattggatgcaataatagatgttgaacaacatataagtgatataacccatatattaatgac-ttaaggtttagagtgaagatgt 7844578  T
Q  344 ggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    |||||||||| ||  ||||||| || | ||| | |||  |||||||||||||||||    
T  7844577 ggtgtcaaactcacttgtgtggtttcttttaatctaacgtgatgatcaaactcaat 7844522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 351
Target Start/End: Original strand, 16853615 - 16853744
Alignment:
Q  222 gggagaaatgttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctatta 319  Q
    |||||| ||||||| |||||||  |||| | ||||||||| ||||||||| ||   |||| ||||  ||||||||| ||| |||| |||||||| || |     
T  16853615 gggagagatgttaaagtgtcaattgtgactcaaagtttcaaattggatgcaagt--aaatcttgaaaaacatataagtgagatgatcaatatacataatg 16853712  T
Q  320 ccttaatgtttagggtgaagatgtggtgtcaa 351  Q
    | |||| |||| |||||| |||||||||||||    
T  16853713 ctttaaggttttgggtgatgatgtggtgtcaa 16853744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 49880585 - 49880653
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtc 349  Q
    |||| |||||||||| | |||||||  ||||||||| ||| ||||| ||||||||||| || |||||||    
T  49880585 ttgaacaacatataagttatatgactcatatacctactactttaatctttagggtgaaaatatggtgtc 49880653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 233 - 399
Target Start/End: Original strand, 11793303 - 11793472
Alignment:
Q  233 taatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaa-catataaatgatatgaccaatatacctattaccttaatgtt 329  Q
    ||||||||||||||  ||||||||||    |||||||||  ||| | || |||||||| ||||||| |||||||||| || ||| || | |||||| |||    
T  11793303 taatgtgtcaagtgtgagttaaagttctgtattggatgcaggagtagatgttgagcaaacatataagtgatatgacccatgtacttaattccttaaggtt 11793402  T
Q  330 tagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    |||||| || |||||||||||||||||  ||| |||||| |||| || |||| |||||||||||||||||    
T  11793403 tagggtaaatatgtggtgtcaaacccacttgtatggattctctttgtctaatgtgatgatcaaactcaat 11793472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 55050035 - 55050172
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| |||||||||||||||||||||||||  |||||||||  |||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  55050035 acttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 55050132  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||||||||    
T  55050133 ctaatttcataaggtttggggtgaagatgtgttgtcaaac 55050172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 24180736 - 24180627
Alignment:
Q  244 gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgt 343  Q
    |||||||||  ||| ||||| ||||| |||| ||||||| |||||||||||| ||| ||| |||||||||||| || ||||| |||| |  |||| ||||    
T  24180736 gtgagttaaccttttacatttgatgcaagagtaaatattaagcaacatataactgaaatgtccaatatacctaatatcttaaggttttgaatgaaaatgt 24180637  T
Q  344 ggtgtcaaac 353  Q
     |||||||||    
T  24180636 agtgtcaaac 24180627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 399
Target Start/End: Original strand, 35695051 - 35695225
Alignment:
Q  226 gaaatgttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattacctt 323  Q
    ||||||||||||||||||  |||||||| |||| |||| ||||||| |||| | ||  ||| |||||||||| |||| ||||  | ||||||||  ||||    
T  35695051 gaaatgttaatgtgtcaagtgtgagttagagttccaca-tggatgcaagagtagatgctgaacaacatataagtgatttgactcacatacctatcgcctt 35695149  T
Q  324 aatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    || ||||| |||||||||| || ||||||  ||  ||||||| || | ||| | |||  |||||||||||||||||    
T  35695150 aaagtttaaggtgaagatgcggcgtcaaattcacttgtgtggtttcttttaatctaacgtgatgatcaaactcaat 35695225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 351
Target Start/End: Complemental strand, 42756903 - 42756772
Alignment:
Q  222 gggagaaatgttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctatta 319  Q
    |||||| ||||||||||||||   |||||| ||| ||  ||||||||||| |||  | |||||||||||||||||| | | ||||| ||||||||||       
T  42756903 gggagagatgttaatgtgtcatttgtgagtaaaacttctacattggatgcaagactatatattgagcaacatataagttaaatgacaaatatacctaaag 42756804  T
Q  320 ccttaatgtttagggtgaagatgtggtgtcaa 351  Q
     ||||| |||| || |||||||||||||||||    
T  42756803 tcttaaggttttggatgaagatgtggtgtcaa 42756772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 296
Target Start/End: Original strand, 50158194 - 50158269
Alignment:
Q  223 ggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaa 296  Q
    ||||| |||||||||||||||||  ||||||||||||||||||  |||| |||| | || ||||||||||||||||    
T  50158194 ggagagatgttaatgtgtcaagtatgagttaaagtttcacattttatgcaagagtatatgttgagcaacatataaa 50158269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 244 - 399
Target Start/End: Complemental strand, 17675344 - 17675190
Alignment:
Q  244 gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgt 343  Q
    |||| |||||||| ||||||||||||   |  | || |||| |||||||||| |||||| ||| ||||||  || || |||| |||||||||||||||||    
T  17675344 gtgatttaaagttccacattggatgcattaatagatgttgaacaacatataagtgatataacccatatactaatgac-ttaaggtttagggtgaagatgt 17675246  T
Q  344 ggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    |||||||||| ||  ||||||  || | ||| | |||  |||||||||||||||||    
T  17675245 ggtgtcaaactcacttgtgtgattttttttaatctaacgtgatgatcaaactcaat 17675190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 244 - 399
Target Start/End: Original strand, 56340297 - 56340451
Alignment:
Q  244 gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgt 343  Q
    |||| |||||||| || ||||||||| | |  | || |||| |||||||||| | |||| ||| |||||  || || ||||| |||||||||||||||||    
T  56340297 gtgatttaaagttccatattggatgcaataatagatgttgaacaacatataagttatataacccatatat-taataacttaaggtttagggtgaagatgt 56340395  T
Q  344 ggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||| |||||||  ||||||| || | ||| | |||  |||||||||||||||||    
T  56340396 ggtgtaaaacccacttgtgtggtttcttttaatctaacgtgatgatcaaactcaat 56340451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 313125 - 313193
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtc 349  Q
    |||| |||||||||| | |||||||  ||||||||| ||| ||||  ||||||||||||||||||||||    
T  313125 ttgaacaacatataagttatatgactcatatacctactactttaagctttagggtgaagatgtggtgtc 313193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 3773441 - 3773505
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtgg 345  Q
    |||||||| ||||||||||||||||  ||||||||| |  ||||| | |||||||||||||||||    
T  3773441 ttgagcaatatataaatgatatgactcatatacctaatttcttaaggattagggtgaagatgtgg 3773505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 4280456 - 4280400
Alignment:
Q  297 tgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    |||||||||| ||| ||||| | |||||| ||||| |||||||||||||||||||||    
T  4280456 tgatatgacccatacacctaatgccttaaggtttatggtgaagatgtggtgtcaaac 4280400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 6553342 - 6553410
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtc 349  Q
    |||| |||||||||| | |||||||  ||||||||| ||| ||||  ||||||||||||||||||||||    
T  6553342 ttgaacaacatataagttatatgactcatatacctactactttaagctttagggtgaagatgtggtgtc 6553410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 353
Target Start/End: Complemental strand, 26290073 - 26289942
Alignment:
Q  222 gggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctatta 319  Q
    ||||||||| ||||||||||||||  |||||||||  |||||||| |||  |||| | || ||||| ||||||||| || ||||| | ||||||||| |     
T  26290073 gggagaaatattaatgtgtcaagtgcgagttaaag--tcacattgtatgtaagagtagatgttgagtaacatataagtgttatgatccatatacctaatt 26289976  T
Q  320 ccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
     | ||| |||| || |||||||||| ||||||||    
T  26289975 tcataaggtttgggttgaagatgtgttgtcaaac 26289942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 24183505 - 24183423
Alignment:
Q  223 ggagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatga 304  Q
    ||||| |||||||||||| |||||  ||||||| |||||||||| |||| |||| | || | ||||||||||||||| ||||||    
T  24183505 ggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagatgt-gagcaacatataaatcatatga 24183423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 28475714 - 28475632
Alignment:
Q  223 ggagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatga 304  Q
    ||||| |||||||||||| |||||  ||||||| |||||||||| |||| |||| | || | ||||||||||||||| ||||||    
T  28475714 ggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagat-tagagcaacatataaataatatga 28475632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 400
Target Start/End: Complemental strand, 26412822 - 26412677
Alignment:
Q  255 tttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacc 354  Q
    ||||||||||||||| ||||  |||  ||| |||||||||| ||||||||| ||||||| || | ||||||| |||| | |||||||||||||||||||     
T  26412822 tttcacattggatgcaagagtgaatgatgaacaacatataagtgatatgacaaatatacataatgccttaatatttatgttgaagatgtggtgtcaaact 26412723  T
Q  355 caactgtgtggattatcttagtataatatgatgatcaaactcaatt 400  Q
    ||  ||||||||||  |||  | |||| ||||||||||| ||||||    
T  26412722 cacttgtgtggattcacttgatctaatgtgatgatcaaattcaatt 26412677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 224 - 353
Target Start/End: Original strand, 29912589 - 29912718
Alignment:
Q  224 gagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattacc 321  Q
    |||||||||||||| ||||||||  |||||||||  |||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||||| |  |    
T  29912589 gagaaatgttaatgcgtcaagtgtgagttaaagt--cacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatacctaatttc 29912686  T
Q  322 ttaatgtttagggtgaagatgtggtgtcaaac 353  Q
     |||  ||| ||||||||||||| ||||||||    
T  29912687 ataagatttggggtgaagatgtgttgtcaaac 29912718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 304
Target Start/End: Complemental strand, 38789022 - 38788940
Alignment:
Q  223 ggagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatga 304  Q
    ||||| |||||||||||| |||||  ||||||| |||||||||| |||| |||| | |||| ||||||||||||||| ||||||    
T  38789022 ggagagatgttaatgtgttaagtgtaagttaaaatttcacattgtatgcaagagtagatat-gagcaacatataaataatatga 38788940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 351
Target Start/End: Complemental strand, 36838122 - 36838051
Alignment:
Q  280 attgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaa 351  Q
    ||||||||| ||||||||||||||||   ||||| || | |||||| ||||| |||||||| ||||||||||    
T  36838122 attgagcaatatataaatgatatgacacgtatacataatgccttaaggtttaaggtgaagacgtggtgtcaa 36838051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 243 - 313
Target Start/End: Original strand, 6202345 - 6202415
Alignment:
Q  243 agtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||||||||  ||| ||||| ||||| |||| ||||||| |||||||||||| ||| ||| |||||||||    
T  6202345 agtgagttaaccttttacatttgatgcaagagtaaatattaagcaacatataagtgagatgtccaatatac 6202415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 353
Target Start/End: Complemental strand, 26247455 - 26247386
Alignment:
Q  284 agcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    |||||| ||||| |||| ||||  ||||||||| | |||||| |||||||||||| |||| |||||||||    
T  26247455 agcaacgtataagtgatttgacacatatacctaattccttaaggtttagggtgaaaatgtagtgtcaaac 26247386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 397
Target Start/End: Complemental strand, 29866010 - 29865894
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataa 380  Q
    |||| ||||||||||| ||||||||  ||||||||| |  ||||| ||||| |||||| |||  ||||||||| ||  |||||| |||||| |  | |||    
T  29866010 ttgaacaacatataaacgatatgacacatatacctaatttcttaaggtttatggtgaaaatgcagtgtcaaactcacttgtgtgaattatcattatctaa 29865911  T
Q  381 tatgatgatcaaactca 397  Q
    |  ||||||||||||||    
T  29865910 tgggatgatcaaactca 29865894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 7e-19; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 231 - 352
Target Start/End: Complemental strand, 31737288 - 31737165
Alignment:
Q  231 gttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgt 328  Q
    |||||||||||||  |||||||||| ||||||||||||||| |||| | || |||| ||||||| || ||||||||   ||||||||| ||| ||||  |    
T  31737288 gttaatgtgtcaattgtgagttaaaatttcacattggatgcaagagtagatgttgaacaacatacaagtgatatgattcatatacctaatacattaagat 31737189  T
Q  329 ttagggtgaagatgtggtgtcaaa 352  Q
    |||| |||||||||||||||||||    
T  31737188 ttagtgtgaagatgtggtgtcaaa 31737165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 399
Target Start/End: Complemental strand, 9452946 - 9452769
Alignment:
Q  224 gagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattacc 321  Q
    ||||||| ||||||| |||||||  |||||||||| || ||||||||| || |   || ||||| ||||||||| |||||||||| ||||| ||| |  |    
T  9452946 gagaaatattaatgtatcaagtgcgagttaaagttccaaattggatgcaagcgtcgatgttgagtaacatataagtgatatgacccatatatctaatttc 9452847  T
Q  322 ttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    |||| |||||| |||||||| |||| |||||| ||  ||| | |||| |||| || |||| |||||||||||||||||    
T  9452846 ttaaggtttagagtgaagatatggtttcaaactcacttgtatagattctctttgtttaatgtgatgatcaaactcaat 9452769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 23410170 - 23410033
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| |||||||||||||||||||||||||  |||||||||  |||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  23410170 acttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 23410073  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||||||||    
T  23410072 ctaatttcataaggtttggggtgaagatgtgttgtcaaac 23410033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 390
Target Start/End: Complemental strand, 18090007 - 18089904
Alignment:
Q  287 aacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgat 386  Q
    ||||||||| ||| |||| ||||||||||| | |||||| |||| |||||||||||||||||||| | || || ||| | |  ||||||| |||||||||    
T  18090007 aacatataattgagatgaacaatatacctaatgccttaaggttttgggtgaagatgtggtgtcaatctcacctctgtagttgctcttagtctaatatgat 18089908  T
Q  387 gatc 390  Q
    ||||    
T  18089907 gatc 18089904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 245 - 399
Target Start/End: Complemental strand, 4791684 - 4791531
Alignment:
Q  245 tgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtg 344  Q
    |||| ||||||| |||||||||||| | || |||| ||||||||||||||| |||||||| | |||| | || |  ||||| ||||||| | ||||||||    
T  4791684 tgagctaaagttccacattggatgcgatagtaaatgttgagcaacatataagtgatatgatccatatgcttaatttcttaaggtttaggat-aagatgtg 4791586  T
Q  345 gtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||||| | ||  |||||||||| |||| || |  |  ||||||||||||||||    
T  4791585 gtgtcaagctcacttgtgtggattctctttgtctgttgagatgatcaaactcaat 4791531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 353
Target Start/End: Complemental strand, 24359674 - 24359566
Alignment:
Q  245 tgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtg 344  Q
    ||||||||||||||| ||||||||  |||  | || |||||| ||| |||| |||||||||  ||||||||| | |||||| ||||||| |||| || ||    
T  24359674 tgagttaaagtttcatattggatgtaagattatatgttgagcgacacataagtgatatgactgatatacctaatgccttaaggtttaggatgaatatatg 24359575  T
Q  345 gtgtcaaac 353  Q
    |||||||||    
T  24359574 gtgtcaaac 24359566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 4031542 - 4031619
Alignment:
Q  229 atgttaatgtgtcaagtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgacc 306  Q
    |||||||||||||||||||||||| ||| |||||| |||   ||||   || ||||||||||||||| ||||||||||    
T  4031542 atgttaatgtgtcaagtgagttaaggttccacattagatataagagtggatgttgagcaacatataagtgatatgacc 4031619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 20872474 - 20872610
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| |||||||||||||| |||||||  |||||||||||  ||||||||||||  |||| | || ||||| | ||||||| || ||||| | ||||||    
T  20872474 acttgagggagaaatgttaacgtgtcaagtgtgagttaaag--tcacattggatgtaagagtagatgttgagtagcatataagtgttatgatccatatac 20872571  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||||||||    
T  20872572 ctaatttcataaggttt-gggtgaagatgtgttgtcaaac 20872610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 399
Target Start/End: Original strand, 16705723 - 16705794
Alignment:
Q  328 tttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    |||| |||||||||||| |||||||| ||  ||| ||| || ||||| |||||||||||| |||||||||||    
T  16705723 tttatggtgaagatgtgatgtcaaacacacatgtttggtttctcttaatataatatgatggtcaaactcaat 16705794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 281 - 351
Target Start/End: Complemental strand, 15600317 - 15600247
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaa 351  Q
    ||||||||||||  |||||||||||||||||||||| |  |||||  |||||| |||| ||||| ||||||    
T  15600317 ttgagcaacataataatgatatgaccaatatacctaatgtcttaagatttaggctgaatatgtgatgtcaa 15600247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 390
Target Start/End: Original strand, 24175782 - 24175911
Alignment:
Q  261 attggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacccaactg 360  Q
    ||||||||| |||| | |||||||||||||||||||||| || | |||||| | || || |||||  ||| ||||  | |||||||||||| |  |  ||    
T  24175782 attggatgcaagagtatatattgagcaacatataaatgagataatcaatatgcataatatcttaagattttgggtacatatgtggtgtcaatcttagttg 24175881  T
Q  361 tgtggattatcttagtataatatgatgatc 390  Q
    || || || |||||||||| ||||||||||    
T  24175882 tggggtttctcttagtatattatgatgatc 24175911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 19944 - 19807
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagtgag--ttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| ||||||||||||||||||||||||| |  |||||||  |||||||||||  |||| | |||||||| ||||||||| || ||||| | ||||||    
T  19944 acttgagggagaaatgttaatgtgtcaagtgcgaattaaagt--cacattggatgtaagagtagatattgagtaacatataagtgttatgatccatatac 19847  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||||||||    
T  19846 ctaatttcataaggtttggggtgaagatgtgttgtcaaac 19807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 4062149 - 4062286
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| |||||||||||||||||||||||||  |||||||||  |||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  4062149 acttgagggagaaatgttaatgtgtcaagtgcgagttaaagt--cacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 4062246  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||||||||    
T  4062247 ctaatttcataaggtttggggtgaagatgtgttgtcaaac 4062286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 7333017 - 7332880
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| |||||||||||||||||||||||||  |||| || |  |||||||||||  |||| | |||||||| ||||||||| || || |||| ||||||    
T  7333017 acttgagggagaaatgttaatgtgtcaagtgcgagttcaaat--cacattggatgtaagagtagatattgagtaacatataagtgttacgacccatatac 7332920  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||||||||    
T  7332919 ctaatttcataaggtttggggtgaagatgtgttgtcaaac 7332880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 8128514 - 8128377
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| ||||||||||||||||||||||||  |||||||||  ||||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  8128514 acttgagggagaaatgttaatgtgtcaagtgcgagttaaag--tcacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 8128417  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
     || |  | ||| |||| || |||||||||| ||||||||    
T  8128416 ataatttcataaagtttgggttgaagatgtgttgtcaaac 8128377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 399
Target Start/End: Original strand, 7928620 - 7928773
Alignment:
Q  245 tgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtg 344  Q
    |||| ||||||| | |||||||||| | || |||| ||||||| ||||||| |||||||| | |||| | || |  ||||| ||||||| | ||||||||    
T  7928620 tgagctaaagttccgcattggatgcgatagtaaatgttgagcagcatataagtgatatgatccatatgcttaatttcttaaggtttaggat-aagatgtg 7928718  T
Q  345 gtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||||| | ||  |||||||||| |||| || |  |  ||||||||||||||||    
T  7928719 gtgtcaagctcacttgtgtggattctctttgtctgttgagatgatcaaactcaat 7928773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 369
Target Start/End: Complemental strand, 19320373 - 19320286
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggatta 369  Q
    |||| |||||||||| |||||||||| |  |||||| |  ||||| |||||||| |||||||||||||||||  ||  |||||||||||    
T  19320373 ttgaacaacatataagtgatatgacccac-tacctaatgtcttaaggtttagggcgaagatgtggtgtcaaattcatttgtgtggatta 19320286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 353
Target Start/End: Complemental strand, 29865946 - 29865818
Alignment:
Q  225 agaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattacct 322  Q
    |||||||||||||||||||||  |||||||||  ||||||||||||  ||||   || ||||| ||||||||| || |||||   ||||||||| |  |     
T  29865946 agaaatgttaatgtgtcaagtgcgagttaaag--tcacattggatgtaagagttgatgttgagtaacatataagtgttatgattcatatacctaatttca 29865849  T
Q  323 taatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |||| ||||||||||||| ||| ||||    
T  29865848 taaggtttggggtgaagatgtgttgttaaac 29865818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 19817486 - 19817349
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| ||||||||||||||||||||||||  |||||||||  ||||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  19817486 acttgagggagaaatgttaatgtgtcaagtgcgagttaaag--tcacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 19817389  T
Q  314 ctattaccttaatgtttagggtgaagatgtggtgtcaaac 353  Q
    ||| |  | ||| |||| ||||||||||||| ||| ||||    
T  19817388 ctaatttcataaggtttggggtgaagatgtgttgttaaac 19817349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 399
Target Start/End: Original strand, 14044292 - 14044463
Alignment:
Q  229 atgttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaat 326  Q
    |||||||||||||||  |||| |||||||| || ||||||||| | || |||| |||| |||||| ||| |||||||||| |||||  || |  |||||     
T  14044292 atgttaatgtgtcaagtgtgatttaaagttccatattggatgcaatagtaaatgttgaacaacatttaagtgatatgacccatata-ttaatgacttaag 14044390  T
Q  327 gtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||| | |||| |||||||||||||| ||  ||||||| || | ||| | |||  |||||||||||||||||    
T  14044391 gtttaagatgaatatgtggtgtcaaactcacttgtgtggtttcttttaatctaacgtgatgatcaaactcaat 14044463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 399
Target Start/End: Original strand, 40056528 - 40056699
Alignment:
Q  229 atgttaatgtgtcaagtgag--ttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaat 326  Q
    ||||||| |||||||||| |  |||||||| |||||||||||| | |  | || |||| |||||||||| |||||| ||| |||||  || |  |||||     
T  40056528 atgttaacgtgtcaagtgtgatttaaagttccacattggatgcaataatagatgttgaacaacatataagtgatataacccatata-ttaatgacttaag 40056626  T
Q  327 gtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||| ||||||||||||||||||||| ||  ||||||| || | ||| | |||  |||||||||||||||||    
T  40056627 gtttatggtgaagatgtggtgtcaaactcacttgtgtggtttcttttaatctaacgtgatgatcaaactcaat 40056699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 395
Target Start/End: Original strand, 53001 - 53076
Alignment:
Q  320 ccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaact 395  Q
    ||||||| ||||||||||| || ||||||||||  ||  |||||  ||| ||||||| ||||||||||||||||||    
T  53001 ccttaatttttagggtgaaaatatggtgtcaaaatcacttgtgtttattctcttagtctaatatgatgatcaaact 53076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 316
Target Start/End: Complemental strand, 12125580 - 12125486
Alignment:
Q  224 gagaaatgttaatgtgtca--agtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatataccta 316  Q
    |||| ||||||||||||||  ||||||||| | ||  || || ||||| |||| | |||||||||||||||||  ||| ||||||||||||||||    
T  12125580 gagagatgttaatgtgtcattagtgagttacacttctacttttgatgcaagagtatatattgagcaacatatatgtgagatgaccaatataccta 12125486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 245 - 399
Target Start/End: Complemental strand, 34854402 - 34854249
Alignment:
Q  245 tgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtg 344  Q
    |||| ||||||| |||||||||||| | || |||| || |||||||||||| |||||||| | |||| | || |  ||||| ||||||| | ||||||||    
T  34854402 tgagctaaagttccacattggatgcgatagtaaatgtttagcaacatataagtgatatgatccatatgcttaatttcttaaggtttaggat-aagatgtg 34854304  T
Q  345 gtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||  | | ||  |||||||||| |||| || || |  ||||||||||||||||    
T  34854303 gtgtttagctcacttgtgtggattctctttgtctattgagatgatcaaactcaat 34854249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 399
Target Start/End: Original strand, 39183160 - 39183238
Alignment:
Q  321 cttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataatatgatgatcaaactcaat 399  Q
    ||||| ||||||||||||||||||||| ||||| ||  ||||||| || | ||| | |||  |||||||||||||||||    
T  39183160 cttaaggtttagggtgaagatgtggtgccaaactcacttgtgtggtttcttttaatctaacgtgatgatcaaactcaat 39183238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 9265298 - 9265367
Alignment:
Q  244 gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    |||||||||  ||| ||||| ||||| |||| ||||||| |||||||||||| ||| ||| |||||||||    
T  9265298 gtgagttaaccttttacatttgatgcaagagtaaatattaagcaacatataagtgagatgtccaatatac 9265367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 351
Target Start/End: Complemental strand, 14249289 - 14249225
Alignment:
Q  287 aacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaa 351  Q
    ||||||||| ||| ||||||||||||| || ||| |||| |||| |||||| |||||||| ||||    
T  14249289 aacatataagtgagatgaccaatatacataatactttaaggttttgggtgatgatgtggtatcaa 14249225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 344
Target Start/End: Complemental strand, 31105 - 30977
Alignment:
Q  216 acttgcgggagaaatgttaatgtgtcaagt--gagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| ||||||||||||||||||||||||  |||||||||  ||||||||||||  |||| | || ||||| ||||||||| || ||||| | ||||||    
T  31105 acttgagggagaaatgttaatgtgtcaagtgcgagttaaag--tcacattggatgtaagagtagatgttgagtaacatataagtgttatgatccatatac 31008  T
Q  314 ctattaccttaatgtttagggtgaagatgtg 344  Q
    ||| |  | ||| |||| |||||||||||||    
T  31007 ctaatttcataaggtttggggtgaagatgtg 30977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 313
Target Start/End: Complemental strand, 11687 - 11600
Alignment:
Q  223 ggagaaatgttaatgtgtcaagtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatac 313  Q
    ||||| |||||||||||| |||||||||||| ||   || || |||| |||| |||||||||||||||||||| ||| |||||| ||||||    
T  11687 ggagagatgttaatgtgtaaagtgagttaaaatt---cagtgtatgcaagagtaaatattgagcaacatataagtgagatgacccatatac 11600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 2121 - 2053
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtc 349  Q
    |||| |||||||||| | |||||||  ||||||||| ||| ||||  ||||||||||||||||||||||    
T  2121 ttgaacaacatataagttatatgactcatatacctactactttaagctttagggtgaagatgtggtgtc 2053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 316
Target Start/End: Complemental strand, 6501 - 6413
Alignment:
Q  230 tgttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatataccta 316  Q
    ||||||||| ||||  ||||||||||||| || ||||||||| | |  | || |||| |||||||||| ||| ||||||||||||||||    
T  6501 tgttaatgtatcaaatgtgagttaaagttccatattggatgcaaaaatagatgttgaacaacatataagtgagatgaccaatataccta 6413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 351
Target Start/End: Complemental strand, 7668 - 7544
Alignment:
Q  229 atgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaat 326  Q
    ||||||||||||||| ||  |||||| |||  ||||||||||  |||| | || ||||||||||||||| | | |||||||| ||||||| |  |||||     
T  7668 atgttaatgtgtcaaatgcgagttaacgttatacattggatggaagagtagattttgagcaacatataagttagatgaccaaaatacctaatgtcttaag 7569  T
Q  327 gtttagggtgaagatgtggtgtcaa 351  Q
    ||||   |||||| |||||||||||    
T  7568 gtttcatgtgaagttgtggtgtcaa 7544  T

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Target: scaffold0216 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 315
Target Start/End: Complemental strand, 29252 - 29157
Alignment:
Q  222 gggagaaatgttaatgtgtcaa--gtgagttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacct 315  Q
    |||||| |||||||||| ||||  ||||||||||||| |||||||||||| | || | || || | |||||||||| ||| |||| ||||||||||    
T  29252 gggagatatgttaatgtatcaaatgtgagttaaagttccacattggatgcaaaagtagatgttaaacaacatataagtgagatgatcaatatacct 29157  T

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Target: scaffold0211 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 349
Target Start/End: Complemental strand, 19737 - 19669
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtc 349  Q
    |||| |||||||||| | |||||||  ||||||||| ||| ||||  ||||||||||||||||||||||    
T  19737 ttgaacaacatataagttatatgactcatatacctactactttaagctttagggtgaagatgtggtgtc 19669  T

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Target: scaffold1743 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1743
Description:

Target: scaffold1743; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 351
Target Start/End: Complemental strand, 318 - 193
Alignment:
Q  227 aaatgttaatgtgtcaagtg--agttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattacctta 324  Q
    ||||||||||||||||||||  |||||| || || |||||| ||| |||| || | |||| ||||| |||| |||||||||  ||||| ||| |  ||||    
T  318 aaatgttaatgtgtcaagtgtgagttaa-gtctcgcattggctgcaagagtaactgttgaacaacaaataagtgatatgactcatatatctaatgtctta 220  T
Q  325 atgtttagggtgaagatgtggtgtcaa 351  Q
    | ||||||| || ||||||||||||||    
T  219 aggtttaggatggagatgtggtgtcaa 193  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 249 - 351
Target Start/End: Complemental strand, 95801 - 95699
Alignment:
Q  249 ttaaagtttcacattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgt 348  Q
    ||||||||||| ||||||||| | || | |||| ||||||  | ||| ||||||||||  ||||| || | |||| | |||||||||||| |||||||||    
T  95801 ttaaagtttcagattggatgcaaaagtagatatcgagcaatgtttaagtgatatgacccgtatacataatgccttgaggtttagggtgaatatgtggtgt 95702  T
Q  349 caa 351  Q
    |||    
T  95701 caa 95699  T

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Target: scaffold0061 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 390
Target Start/End: Complemental strand, 44951 - 44842
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataa 380  Q
    ||||| || |||||| ||| |||| ||||||||||| | |||||  ||||  ||||||||||||||||||| | ||| | ||| | |  ||||||| |||    
T  44951 ttgagaaatatataagtgagatgaacaatatacctaatgccttatggtttttggtgaagatgtggtgtcaatctcaaatatgtagttgctcttagtctaa 44852  T
Q  381 tatgatgatc 390  Q
    ||||||||||    
T  44851 tatgatgatc 44842  T

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Target: scaffold0061; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 348
Target Start/End: Complemental strand, 45673 - 45609
Alignment:
Q  284 agcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgt 348  Q
    |||||||||||||||| ||||| |||||||||| |  |||||  ||| |||||||||| ||||||    
T  45673 agcaacatataaatgagatgacaaatatacctaatgtcttaagattttgggtgaagatttggtgt 45609  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 390
Target Start/End: Original strand, 153836 - 153945
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaaacccaactgtgtggattatcttagtataa 380  Q
    ||||| || |||||| ||| |||| ||||||||||| | |||||  ||||  ||||||||||||||||||| | ||| | ||| | |  ||||||| |||    
T  153836 ttgagaaatatataagtgagatgaacaatatacctaatgccttatggtttttggtgaagatgtggtgtcaatctcaaatatgtagttgctcttagtctaa 153935  T
Q  381 tatgatgatc 390  Q
    ||||||||||    
T  153936 tatgatgatc 153945  T

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Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 284 - 348
Target Start/End: Original strand, 153114 - 153178
Alignment:
Q  284 agcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgt 348  Q
    |||||||||||||||| ||||| |||||||||| |  |||||  ||| |||||||||| ||||||    
T  153114 agcaacatataaatgagatgacaaatatacctaatgtcttaagattttgggtgaagatttggtgt 153178  T

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Target: scaffold0191 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 351
Target Start/End: Original strand, 11646 - 11710
Alignment:
Q  287 aacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaa 351  Q
    ||||||||| ||| |||| |||||||| || ||| |||| |||| |||||| |||||||||||||    
T  11646 aacatataagtgagatgatcaatatacataatactttaaggttttgggtgatgatgtggtgtcaa 11710  T

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Target: scaffold0169 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 259 - 351
Target Start/End: Original strand, 5157 - 5249
Alignment:
Q  259 acattggatgctagagcaaatattgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtcaa 351  Q
    ||||||||||| |||  | | ||||| |||||||||| |||  ||||||||||||||| |  |||| | ||| ||||||| ||||||||||||    
T  5157 acattggatgcaagaatatacattgaacaacatataagtgaagtgaccaatatacctaatgtcttactattttgggtgaatatgtggtgtcaa 5249  T

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Target: scaffold0114 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 281 - 349
Target Start/End: Original strand, 35462 - 35530
Alignment:
Q  281 ttgagcaacatataaatgatatgaccaatatacctattaccttaatgtttagggtgaagatgtggtgtc 349  Q
    |||| |||||||||| | |||||||  ||||||||| ||| ||||  ||||||||||||||||| ||||    
T  35462 ttgaacaacatataagttatatgactcatatacctactactttaagctttagggtgaagatgtgatgtc 35530  T

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