View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1139_high_173 (Length: 251)
Name: NF1139_high_173
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1139_high_173 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 234
Target Start/End: Original strand, 40515414 - 40515639
Alignment:
| Q |
9 |
aacaaaggagtatatgatagatgtaaaaatgtgtatagaaaacttaattgagctcattttaagttgacttgatgcatcatgtatacgttggtaataggta |
108 |
Q |
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| T |
40515414 |
aacaaaggagtatatgatagatgtaaaaatgtgtatagaaaacttaattgagctcattttaagttgacttgatgcatcatgtatacgttggtaataggta |
40515513 |
T |
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| Q |
109 |
ttaagagagaaagcgaaatatgcatgcatgatgcgtataaattgtgcatttgtgtgccacatggcatctatcaaaatttaggattggttgtgcattttta |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
40515514 |
ttaagagagaaagcgaaatatgcatgcatgatgcgtataaattgtgcatttgtgtgccacattgcatctatcaaaatttaggattggttgtgcattttta |
40515613 |
T |
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| Q |
209 |
caaataaaaagaagaaaattgttagg |
234 |
Q |
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|||||||||||||||||||||||||| |
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| T |
40515614 |
caaataaaaagaagaaaattgttagg |
40515639 |
T |
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