View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1139_high_23 (Length: 525)

Name: NF1139_high_23
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1139_high_23
NF1139_high_23
[»] chr8 (62 HSPs)
chr8 (71-199)||(1875548-1875675)
chr8 (71-199)||(39482648-39482775)
chr8 (71-174)||(9300094-9300196)
chr8 (67-199)||(11976892-11977023)
chr8 (71-199)||(45425622-45425749)
chr8 (66-181)||(42972482-42972596)
chr8 (71-176)||(21216080-21216184)
chr8 (71-176)||(31271054-31271158)
chr8 (71-183)||(31082652-31082763)
chr8 (71-173)||(14854916-14855017)
chr8 (71-176)||(10179926-10180030)
chr8 (67-176)||(13335245-13335353)
chr8 (71-176)||(40996344-40996448)
chr8 (71-174)||(51146-51247)
chr8 (73-176)||(32476322-32476424)
chr8 (71-146)||(44761503-44761577)
chr8 (71-176)||(17719237-17719341)
chr8 (71-176)||(22771814-22771918)
chr8 (71-176)||(26626091-26626195)
chr8 (71-176)||(34948666-34948770)
chr8 (71-183)||(39405795-39405906)
chr8 (73-160)||(34393949-34394035)
chr8 (90-176)||(36967413-36967498)
chr8 (71-160)||(2767286-2767374)
chr8 (71-176)||(10097970-10098074)
chr8 (77-176)||(7703135-7703233)
chr8 (71-152)||(4428354-4428434)
chr8 (73-174)||(7172949-7173049)
chr8 (71-160)||(31231763-31231851)
chr8 (107-176)||(32678787-32678855)
chr8 (274-362)||(45405789-45405878)
chr8 (107-183)||(1739709-1739784)
chr8 (72-152)||(5053156-5053235)
chr8 (108-183)||(6611767-6611841)
chr8 (72-159)||(41092028-41092114)
chr8 (98-176)||(6796024-6796101)
chr8 (100-165)||(10953398-10953462)
chr8 (100-165)||(10961403-10961467)
chr8 (107-156)||(29226230-29226278)
chr8 (84-173)||(39329065-39329153)
chr8 (71-156)||(40028549-40028632)
chr8 (274-345)||(7325727-7325799)
chr8 (80-176)||(39300920-39301015)
chr8 (379-418)||(24503051-24503090)
chr8 (274-362)||(38174203-38174293)
chr8 (123-173)||(39465793-39465841)
chr8 (73-155)||(396611-396692)
chr8 (274-327)||(5502372-5502426)
chr8 (274-319)||(41541870-41541916)
chr8 (274-335)||(43419880-43419942)
chr8 (67-152)||(4924070-4924154)
chr8 (73-162)||(11649643-11649731)
chr8 (383-432)||(41675254-41675303)
chr8 (379-427)||(5502496-5502544)
chr8 (274-354)||(5740761-5740844)
chr8 (379-427)||(11223748-11223796)
chr8 (273-309)||(17492529-17492565)
chr8 (380-431)||(21648815-21648867)
chr8 (274-329)||(22706243-22706299)
chr8 (379-427)||(23258166-23258214)
chr8 (380-428)||(40102158-40102206)
chr8 (379-427)||(43403918-43403966)
[»] scaffold0294 (1 HSPs)
scaffold0294 (73-183)||(17070-17179)
[»] chr5 (53 HSPs)
chr5 (71-199)||(40530177-40530304)
chr5 (71-176)||(7827902-7828006)
chr5 (71-199)||(4818584-4818711)
chr5 (75-176)||(2232049-2232149)
chr5 (81-196)||(9515789-9515903)
chr5 (71-199)||(8698342-8698469)
chr5 (71-183)||(41496113-41496224)
chr5 (71-174)||(8724987-8725089)
chr5 (73-183)||(22848353-22848462)
chr5 (71-173)||(40899951-40900052)
chr5 (71-176)||(27542828-27542932)
chr5 (73-183)||(29570427-29570536)
chr5 (71-176)||(6753635-6753738)
chr5 (80-182)||(15818450-15818553)
chr5 (71-166)||(6615866-6615960)
chr5 (71-176)||(1248580-1248684)
chr5 (71-176)||(6315753-6315857)
chr5 (71-183)||(29374375-29374486)
chr5 (71-183)||(31655086-31655197)
chr5 (72-176)||(38508163-38508266)
chr5 (71-173)||(27580633-27580735)
chr5 (68-151)||(41062161-41062243)
chr5 (71-160)||(19929979-19930067)
chr5 (71-176)||(21060663-21060767)
chr5 (24-63)||(8361837-8361876)
chr5 (276-362)||(33567193-33567280)
chr5 (125-199)||(843523-843597)
chr5 (70-199)||(32440173-32440301)
chr5 (379-436)||(39595408-39595465)
chr5 (73-174)||(42803598-42803698)
chr5 (125-176)||(42922843-42922894)
chr5 (94-152)||(18890555-18890612)
chr5 (278-362)||(7080546-7080631)
chr5 (71-152)||(18841512-18841592)
chr5 (379-428)||(24431506-24431555)
chr5 (274-362)||(39458669-39458758)
chr5 (71-171)||(6754062-6754160)
chr5 (274-306)||(14073053-14073085)
chr5 (379-427)||(20719904-20719952)
chr5 (71-176)||(2588044-2588141)
chr5 (73-152)||(26285478-26285556)
chr5 (296-362)||(2117594-2117660)
chr5 (94-176)||(41478883-41478964)
chr5 (94-176)||(41492358-41492439)
chr5 (300-345)||(12718367-12718412)
chr5 (68-173)||(37184058-37184162)
chr5 (379-431)||(125226-125278)
chr5 (379-427)||(2117529-2117577)
chr5 (379-427)||(9403647-9403695)
chr5 (80-172)||(15439299-15439390)
chr5 (379-430)||(16202854-16202906)
chr5 (383-430)||(22402774-22402822)
chr5 (126-198)||(31747969-31748041)
[»] chr3 (58 HSPs)
chr3 (71-199)||(43253818-43253945)
chr3 (78-176)||(10366620-10366717)
chr3 (71-183)||(37311983-37312094)
chr3 (71-174)||(19823044-19823146)
chr3 (71-176)||(8679032-8679136)
chr3 (77-199)||(27471374-27471495)
chr3 (71-176)||(37695643-37695748)
chr3 (71-176)||(30190638-30190742)
chr3 (71-176)||(52290926-52291030)
chr3 (71-199)||(11632114-11632240)
chr3 (73-183)||(3313289-3313394)
chr3 (71-176)||(29023944-29024047)
chr3 (71-183)||(23004354-23004464)
chr3 (73-176)||(11905857-11905959)
chr3 (67-174)||(36476613-36476719)
chr3 (67-174)||(53560246-53560352)
chr3 (73-183)||(36460387-36460496)
chr3 (71-160)||(24569094-24569182)
chr3 (83-199)||(1778687-1778802)
chr3 (75-175)||(37772943-37773042)
chr3 (74-173)||(34750532-34750630)
chr3 (71-176)||(37497525-37497629)
chr3 (71-172)||(43719300-43719399)
chr3 (71-199)||(50035172-50035299)
chr3 (71-174)||(12736552-12736654)
chr3 (71-174)||(28690762-28690864)
chr3 (125-183)||(33491054-33491112)
chr3 (71-176)||(49830162-49830267)
chr3 (71-176)||(45710883-45710987)
chr3 (71-176)||(17652785-17652885)
chr3 (73-160)||(54726520-54726606)
chr3 (83-173)||(51837940-51838029)
chr3 (70-174)||(5322919-5323020)
chr3 (107-196)||(51064776-51064864)
chr3 (91-183)||(31158493-31158583)
chr3 (71-155)||(39931662-39931745)
chr3 (94-176)||(14194611-14194692)
chr3 (74-176)||(38795380-38795481)
chr3 (296-354)||(42672272-42672329)
chr3 (71-176)||(34957536-34957640)
chr3 (274-345)||(1765405-1765477)
chr3 (73-173)||(30711108-30711207)
chr3 (274-332)||(47683802-47683861)
chr3 (379-428)||(29706037-29706086)
chr3 (379-427)||(31997936-31997985)
chr3 (71-176)||(44301595-44301699)
chr3 (274-309)||(2482708-2482744)
chr3 (383-427)||(7231895-7231939)
chr3 (379-419)||(11173584-11173624)
chr3 (100-152)||(19609361-19609412)
chr3 (71-199)||(19611942-19612068)
chr3 (379-427)||(20380778-20380826)
chr3 (123-199)||(23068284-23068360)
chr3 (274-309)||(24537220-24537256)
chr3 (122-162)||(25090046-25090086)
chr3 (277-309)||(44365326-44365358)
chr3 (380-428)||(46315843-46315891)
chr3 (379-427)||(46473262-46473310)
[»] chr4 (90 HSPs)
chr4 (71-196)||(32884834-32884958)
chr4 (71-199)||(34360688-34360815)
chr4 (71-183)||(40122831-40122942)
chr4 (71-183)||(44536173-44536284)
chr4 (71-176)||(2066822-2066926)
chr4 (71-176)||(33790715-33790819)
chr4 (71-176)||(38405086-38405190)
chr4 (71-172)||(42517626-42517726)
chr4 (74-183)||(47464342-47464450)
chr4 (71-183)||(7061641-7061752)
chr4 (71-167)||(35380326-35380421)
chr4 (73-175)||(46396868-46396969)
chr4 (71-176)||(49428326-49428430)
chr4 (71-183)||(6643637-6643748)
chr4 (73-173)||(11907586-11907685)
chr4 (71-199)||(17237257-17237384)
chr4 (71-183)||(53346792-53346903)
chr4 (71-176)||(17114473-17114577)
chr4 (71-196)||(43237276-43237400)
chr4 (91-176)||(51625136-51625220)
chr4 (71-160)||(52859799-52859887)
chr4 (71-183)||(2942622-2942732)
chr4 (71-199)||(16821292-16821419)
chr4 (71-199)||(35311184-35311311)
chr4 (68-199)||(36985816-36985946)
chr4 (71-176)||(3689595-3689699)
chr4 (71-176)||(5841411-5841515)
chr4 (71-176)||(47773003-47773107)
chr4 (71-176)||(52247412-52247516)
chr4 (71-175)||(28500876-28500979)
chr4 (67-162)||(39157871-39157966)
chr4 (73-183)||(29575143-29575252)
chr4 (80-177)||(6609803-6609899)
chr4 (73-150)||(32469958-32470034)
chr4 (72-176)||(49175918-49176021)
chr4 (71-183)||(22130076-22130191)
chr4 (73-174)||(2653455-2653553)
chr4 (73-183)||(4972595-4972704)
chr4 (274-362)||(37547066-37547152)
chr4 (73-155)||(38502487-38502568)
chr4 (71-156)||(21240708-21240792)
chr4 (67-176)||(30682180-30682288)
chr4 (73-182)||(52869107-52869215)
chr4 (71-176)||(54506821-54506925)
chr4 (80-176)||(5618584-5618679)
chr4 (71-183)||(49746994-49747104)
chr4 (67-174)||(30192234-30192340)
chr4 (274-362)||(7795026-7795115)
chr4 (74-159)||(35998847-35998931)
chr4 (124-176)||(50263916-50263968)
chr4 (79-174)||(8175566-8175660)
chr4 (94-176)||(11288614-11288695)
chr4 (300-361)||(24154667-24154728)
chr4 (71-136)||(26147639-26147703)
chr4 (70-127)||(38663479-38663536)
chr4 (73-178)||(49579160-49579264)
chr4 (275-319)||(17367091-17367135)
chr4 (71-155)||(23915435-23915518)
chr4 (71-155)||(25233214-25233297)
chr4 (100-176)||(27880226-27880300)
chr4 (379-431)||(28480423-28480475)
chr4 (112-156)||(34321715-34321758)
chr4 (94-174)||(41711442-41711521)
chr4 (383-427)||(46173675-46173719)
chr4 (125-176)||(25141898-25141949)
chr4 (380-427)||(47998728-47998775)
chr4 (379-429)||(15596530-15596580)
chr4 (268-309)||(23347770-23347812)
chr4 (94-176)||(42616887-42616968)
chr4 (379-421)||(51389450-51389492)
chr4 (274-315)||(54036546-54036588)
chr4 (383-428)||(5234359-5234404)
chr4 (321-358)||(6290521-6290558)
chr4 (74-147)||(17512352-17512424)
chr4 (379-428)||(28481300-28481349)
chr4 (379-428)||(28482175-28482224)
chr4 (274-326)||(32365673-32365726)
chr4 (380-429)||(38844377-38844426)
chr4 (74-159)||(53412144-53412228)
chr4 (379-427)||(1033282-1033330)
chr4 (274-309)||(6953422-6953458)
chr4 (302-362)||(11012182-11012242)
chr4 (380-428)||(16004215-16004263)
chr4 (383-427)||(31275284-31275328)
chr4 (379-427)||(42915108-42915156)
chr4 (274-309)||(46566930-46566966)
chr4 (274-314)||(49906144-49906184)
chr4 (383-427)||(51717173-51717217)
chr4 (274-309)||(52392259-52392295)
chr4 (380-428)||(53583016-53583064)
[»] chr7 (80 HSPs)
chr7 (71-199)||(28103773-28103900)
chr7 (71-176)||(5524420-5524524)
chr7 (71-183)||(11373406-11373517)
chr7 (71-199)||(24516251-24516378)
chr7 (73-176)||(21759969-21760071)
chr7 (71-172)||(41506054-41506154)
chr7 (80-183)||(29835392-29835494)
chr7 (71-177)||(38391788-38391893)
chr7 (71-176)||(42935701-42935805)
chr7 (71-199)||(7463253-7463380)
chr7 (71-175)||(8592426-8592529)
chr7 (71-155)||(27921028-27921111)
chr7 (73-195)||(46478259-46478380)
chr7 (71-183)||(2459511-2459620)
chr7 (71-176)||(9786028-9786132)
chr7 (71-176)||(34947540-34947644)
chr7 (72-176)||(83426-83529)
chr7 (71-174)||(3178191-3178293)
chr7 (68-183)||(22738738-22738852)
chr7 (71-173)||(12631345-12631446)
chr7 (71-183)||(21350606-21350714)
chr7 (73-183)||(34100525-34100634)
chr7 (94-176)||(44180268-44180349)
chr7 (72-173)||(759079-759179)
chr7 (71-199)||(23670526-23670652)
chr7 (71-174)||(28202296-28202398)
chr7 (71-173)||(16560558-16560659)
chr7 (71-173)||(16605003-16605104)
chr7 (71-176)||(26974066-26974173)
chr7 (72-173)||(7457409-7457509)
chr7 (71-176)||(21390335-21390439)
chr7 (71-175)||(30866007-30866110)
chr7 (80-176)||(40076364-40076459)
chr7 (80-159)||(33819263-33819341)
chr7 (71-176)||(2850866-2850970)
chr7 (274-362)||(37856135-37856224)
chr7 (71-176)||(43873963-43874067)
chr7 (379-431)||(10591286-10591338)
chr7 (71-162)||(7930093-7930183)
chr7 (80-174)||(37245739-37245834)
chr7 (71-173)||(13961999-13962100)
chr7 (71-117)||(42796048-42796094)
chr7 (75-176)||(46211472-46211575)
chr7 (71-176)||(16904419-16904523)
chr7 (71-176)||(19271718-19271822)
chr7 (274-345)||(25887595-25887667)
chr7 (139-199)||(42796097-42796157)
chr7 (71-174)||(32346039-32346141)
chr7 (270-319)||(3062339-3062389)
chr7 (71-176)||(31930482-31930586)
chr7 (274-345)||(2469704-2469776)
chr7 (380-428)||(12142019-12142067)
chr7 (78-162)||(25530989-25531072)
chr7 (71-159)||(32018917-32019005)
chr7 (274-345)||(38218338-38218410)
chr7 (80-176)||(39452393-39452487)
chr7 (71-176)||(48608906-48609006)
chr7 (379-426)||(7990207-7990254)
chr7 (380-427)||(8792489-8792536)
chr7 (274-344)||(34264595-34264666)
chr7 (274-309)||(37149525-37149560)
chr7 (68-123)||(39005458-39005513)
chr7 (122-173)||(49101756-49101807)
chr7 (68-122)||(26982908-26982962)
chr7 (274-355)||(28862058-28862140)
chr7 (274-319)||(31274553-31274599)
chr7 (300-362)||(33212081-33212143)
chr7 (110-176)||(44424214-44424279)
chr7 (275-315)||(237026-237067)
chr7 (380-421)||(15325661-15325702)
chr7 (71-176)||(17828337-17828440)
chr7 (379-428)||(26153794-26153843)
chr7 (379-430)||(2790311-2790363)
chr7 (274-345)||(27866524-27866596)
chr7 (269-309)||(31467607-31467647)
chr7 (274-345)||(34992322-34992394)
chr7 (383-427)||(37351879-37351923)
chr7 (274-309)||(42663085-42663121)
chr7 (383-427)||(43445545-43445589)
chr7 (280-319)||(45431971-45432011)
[»] chr1 (74 HSPs)
chr1 (71-183)||(23168967-23169078)
chr1 (68-199)||(28749021-28749151)
chr1 (71-183)||(9307660-9307771)
chr1 (71-199)||(24991611-24991738)
chr1 (73-183)||(12039117-12039226)
chr1 (71-176)||(26093427-26093531)
chr1 (71-176)||(39864144-39864248)
chr1 (68-176)||(917054-917161)
chr1 (71-160)||(49223983-49224071)
chr1 (71-199)||(31042830-31042957)
chr1 (73-155)||(40144849-40144930)
chr1 (71-176)||(16395028-16395131)
chr1 (67-176)||(33733244-33733351)
chr1 (71-160)||(37276494-37276582)
chr1 (71-176)||(38787374-38787478)
chr1 (71-174)||(34031510-34031612)
chr1 (71-174)||(42410027-42410129)
chr1 (71-176)||(15699155-15699260)
chr1 (70-179)||(32970545-32970653)
chr1 (71-155)||(20209842-20209925)
chr1 (73-176)||(31978633-31978735)
chr1 (73-160)||(45331376-45331462)
chr1 (73-183)||(6023623-6023732)
chr1 (74-176)||(21909987-21910087)
chr1 (71-176)||(30754922-30755026)
chr1 (71-176)||(32825973-32826076)
chr1 (80-152)||(29074926-29074997)
chr1 (71-199)||(44707718-44707845)
chr1 (125-176)||(5179380-5179431)
chr1 (73-159)||(6160457-6160542)
chr1 (107-176)||(35367625-35367694)
chr1 (71-160)||(7759248-7759336)
chr1 (71-152)||(36701954-36702034)
chr1 (71-152)||(36718058-36718138)
chr1 (71-155)||(4441605-4441688)
chr1 (274-345)||(27687506-27687578)
chr1 (92-176)||(43500765-43500848)
chr1 (110-173)||(27687313-27687375)
chr1 (71-146)||(41121836-41121910)
chr1 (89-176)||(43614448-43614534)
chr1 (71-176)||(37506157-37506264)
chr1 (379-429)||(40610363-40610413)
chr1 (274-362)||(31480089-31480178)
chr1 (110-174)||(11449955-11450018)
chr1 (274-345)||(15466759-15466831)
chr1 (74-122)||(32219695-32219743)
chr1 (91-174)||(10495891-10495973)
chr1 (73-160)||(22181371-22181457)
chr1 (274-345)||(48256921-48256991)
chr1 (73-176)||(51028474-51028576)
chr1 (122-176)||(6267837-6267891)
chr1 (71-173)||(13579605-13579706)
chr1 (71-117)||(14757633-14757679)
chr1 (71-157)||(44761531-44761616)
chr1 (277-362)||(47187637-47187723)
chr1 (95-176)||(2572525-2572605)
chr1 (279-327)||(4637942-4637991)
chr1 (71-152)||(8896337-8896417)
chr1 (386-427)||(28716284-28716325)
chr1 (380-429)||(36690459-36690508)
chr1 (380-429)||(36706560-36706609)
chr1 (274-309)||(11097918-11097954)
chr1 (274-354)||(14983785-14983868)
chr1 (274-309)||(20288374-20288410)
chr1 (71-171)||(24880909-24881008)
chr1 (71-167)||(27896988-27897083)
chr1 (71-107)||(35367835-35367871)
chr1 (274-345)||(40139127-40139199)
chr1 (274-345)||(42539419-42539491)
chr1 (73-146)||(44122248-44122322)
chr1 (274-345)||(46903482-46903554)
chr1 (379-427)||(46948113-46948161)
chr1 (274-345)||(47059877-47059949)
chr1 (274-345)||(49453492-49453564)
[»] chr6 (39 HSPs)
chr6 (71-176)||(1781835-1781939)
chr6 (71-176)||(11655923-11656027)
chr6 (71-183)||(15058150-15058261)
chr6 (71-199)||(23142700-23142827)
chr6 (71-199)||(31894164-31894291)
chr6 (71-176)||(13087563-13087667)
chr6 (72-176)||(29363340-29363443)
chr6 (71-173)||(13909457-13909558)
chr6 (68-173)||(6834349-6834453)
chr6 (73-174)||(21010212-21010312)
chr6 (67-176)||(32440622-32440730)
chr6 (71-183)||(3720211-3720322)
chr6 (71-176)||(3291745-3291849)
chr6 (71-183)||(181589-181699)
chr6 (71-155)||(6801964-6802047)
chr6 (71-158)||(24983444-24983530)
chr6 (71-176)||(1955956-1956060)
chr6 (80-176)||(27448133-27448228)
chr6 (82-162)||(2423662-2423741)
chr6 (86-166)||(27367423-27367502)
chr6 (86-166)||(27457770-27457849)
chr6 (71-155)||(30716933-30717016)
chr6 (73-160)||(5302386-5302472)
chr6 (71-117)||(11143622-11143668)
chr6 (106-183)||(34639422-34639498)
chr6 (274-345)||(3179990-3180062)
chr6 (108-176)||(7072230-7072297)
chr6 (122-162)||(12340042-12340082)
chr6 (67-131)||(12605485-12605548)
chr6 (383-427)||(30714811-30714855)
chr6 (71-152)||(1063604-1063684)
chr6 (273-345)||(25338064-25338137)
chr6 (71-175)||(1225080-1225183)
chr6 (274-345)||(2163703-2163775)
chr6 (274-345)||(2175336-2175408)
chr6 (71-123)||(8115067-8115119)
chr6 (379-427)||(16336959-16337007)
chr6 (387-427)||(17457577-17457617)
chr6 (383-427)||(30733147-30733191)
[»] chr2 (57 HSPs)
chr2 (71-176)||(16463722-16463826)
chr2 (73-176)||(45235616-45235718)
chr2 (71-196)||(5789604-5789728)
chr2 (71-174)||(16805914-16806016)
chr2 (71-174)||(16845195-16845297)
chr2 (71-176)||(37322461-37322566)
chr2 (71-176)||(31448669-31448773)
chr2 (71-160)||(35313920-35314008)
chr2 (71-176)||(39691523-39691627)
chr2 (71-183)||(8947021-8947132)
chr2 (96-183)||(3323255-3323341)
chr2 (71-176)||(15359063-15359167)
chr2 (67-176)||(17695359-17695467)
chr2 (73-174)||(34225625-34225725)
chr2 (94-176)||(19937733-19937814)
chr2 (71-173)||(36354422-36354523)
chr2 (73-174)||(25637516-25637615)
chr2 (71-183)||(16377625-16377736)
chr2 (111-174)||(26607946-26608008)
chr2 (71-176)||(14523348-14523452)
chr2 (71-176)||(43115778-43115882)
chr2 (71-155)||(36794317-36794400)
chr2 (73-176)||(39785620-39785725)
chr2 (125-183)||(39443799-39443857)
chr2 (274-362)||(27538886-27538975)
chr2 (80-173)||(32783406-32783498)
chr2 (73-173)||(43410461-43410560)
chr2 (80-156)||(43699595-43699670)
chr2 (73-183)||(39329630-39329742)
chr2 (94-175)||(34120416-34120496)
chr2 (379-427)||(3091875-3091923)
chr2 (274-345)||(43725217-43725289)
chr2 (73-171)||(1206683-1206781)
chr2 (71-118)||(3601417-3601464)
chr2 (269-327)||(6511561-6511620)
chr2 (274-309)||(17826052-17826087)
chr2 (75-146)||(19426492-19426563)
chr2 (274-327)||(3012850-3012904)
chr2 (72-174)||(11367113-11367214)
chr2 (379-429)||(14714120-14714170)
chr2 (274-315)||(25801830-25801872)
chr2 (274-319)||(26277108-26277154)
chr2 (304-362)||(38464472-38464530)
chr2 (383-421)||(41195590-41195628)
chr2 (296-354)||(1907739-1907799)
chr2 (386-435)||(22195761-22195810)
chr2 (379-428)||(23344877-23344926)
chr2 (71-132)||(26337141-26337201)
chr2 (107-176)||(27501514-27501582)
chr2 (125-162)||(33729907-33729944)
chr2 (110-166)||(12520836-12520891)
chr2 (274-345)||(19695678-19695750)
chr2 (68-168)||(28170567-28170666)
chr2 (71-155)||(31976381-31976464)
chr2 (74-162)||(38763584-38763671)
chr2 (67-146)||(43730644-43730720)
chr2 (314-354)||(43762082-43762122)
[»] scaffold0302 (1 HSPs)
scaffold0302 (73-197)||(16133-16256)
[»] scaffold0018 (1 HSPs)
scaffold0018 (71-199)||(135992-136119)
[»] scaffold0159 (1 HSPs)
scaffold0159 (71-196)||(33977-34101)
[»] scaffold0330 (1 HSPs)
scaffold0330 (71-176)||(5423-5527)
[»] scaffold0110 (1 HSPs)
scaffold0110 (75-176)||(1741-1841)
[»] scaffold0095 (2 HSPs)
scaffold0095 (71-183)||(50237-50348)
scaffold0095 (123-173)||(22660-22708)
[»] scaffold0012 (1 HSPs)
scaffold0012 (71-175)||(105717-105820)
[»] scaffold1391 (1 HSPs)
scaffold1391 (73-173)||(1798-1897)
[»] scaffold0182 (1 HSPs)
scaffold0182 (71-173)||(20334-20435)
[»] scaffold0583 (1 HSPs)
scaffold0583 (71-176)||(2058-2162)
[»] scaffold0003 (2 HSPs)
scaffold0003 (80-176)||(39130-39225)
scaffold0003 (107-176)||(252507-252575)
[»] scaffold0470 (1 HSPs)
scaffold0470 (108-183)||(1055-1129)
[»] scaffold1809 (1 HSPs)
scaffold1809 (71-141)||(697-766)
[»] scaffold0504 (1 HSPs)
scaffold0504 (274-326)||(11159-11212)
[»] scaffold0328 (1 HSPs)
scaffold0328 (71-160)||(7975-8063)
[»] scaffold0464 (1 HSPs)
scaffold0464 (102-176)||(6263-6336)
[»] scaffold0154 (1 HSPs)
scaffold0154 (380-434)||(9730-9784)
[»] scaffold0100 (1 HSPs)
scaffold0100 (274-326)||(44787-44840)
[»] scaffold0286 (1 HSPs)
scaffold0286 (274-345)||(18634-18706)
[»] scaffold0024 (1 HSPs)
scaffold0024 (143-183)||(84384-84424)


Alignment Details
Target: chr8 (Bit Score: 85; Significance: 3e-40; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 1875675 - 1875548
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||||||||||| |||||||||    
T  1875675 actaactacaattaataagggtgttttagtaaatgctactaattttaccattgaaa-tcaacacaattaatcatttccttaataatcgtgcacaaacctt 1875577  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| |||||| || ||||||||||||    
T  1875576 aaacgactaatataataagacggagggag 1875548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 39482648 - 39482775
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||||| |||    
T  39482648 actaactataattaataagggtgttttagtaaattctactaattttacccttgaaa-tcaacacaattaatcattttcttaataatcgtgcacaaatctt 39482746  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| ||||||  | ||||||||||||    
T  39482747 aaacgactaatattgtgagacggagggag 39482775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 9300196 - 9300094
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||    
T  9300196 actaactaaaattaataagggtgttttagtaaatgctattaattttaccatt-aaaatcaacacaaacaatcattttcttaataatcgtgcataaacctt 9300098  T
Q  171 aaac 174  Q
    ||||    
T  9300097 aaac 9300094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 67 - 199
Target Start/End: Complemental strand, 11977023 - 11976892
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    |||||||||||| ||||||||||||| ||||| ||||||||||| ||| ||||||| ||| ||||||||| |||| |||| | |||||||| || |||||    
T  11977023 ctctactaactacaattaataagggtattttagtaaatgctactgattataccattgaaa-tcaacacaattaatgatttccataataatcatgcacaaa 11976925  T
Q  167 ccttaaacgaataatatcatcagacggagggag 199  Q
    |||||||||| |||||| || ||||||||||||    
T  11976924 ccttaaacgactaatattatgagacggagggag 11976892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 45425749 - 45425622
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||  |||||||||||||| || ||||||||||||| ||||||||||||| |||||||||||||||||||| || | ||| |||    
T  45425749 actaactacaattaataagaatgttttaataaatgttattaattttaccatt-aaaatcaacacaattaatcattttcttaataatcatgcataaaactt 45425651  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| |||||| || ||||||| ||||    
T  45425650 aaacgactaatattatgagacggaaggag 45425622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 66 - 181
Target Start/End: Complemental strand, 42972596 - 42972482
Alignment:
Q  66 tctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaa 165  Q
    |||| |||||||||||||||||||||| ||||| |||| | || ||||||||||||| ||| |||| |||| ||||||||||||||||||||||| ||||    
T  42972596 tctccactaactataattaataagggtattttagtaaacgatattaattttaccattgaaa-tcaaaacaattaatcattttcttaataatcgtgcacaa 42972498  T
Q  166 accttaaacgaataat 181  Q
    |||||||| |||||||    
T  42972497 accttaaatgaataat 42972482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 21216184 - 21216080
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| ||||||| ||||||| ||||||||||||||| ||| ||||||||| ||||||||| |||||||||| || |||||||||    
T  21216184 actaactacaattaataaggatgttttagtaaatgcaactaattttaccattgaaa-tcaacacaattaatcatttccttaataatcatgcacaaacctt 21216086  T
Q  171 aaacga 176  Q
    ||||||    
T  21216085 aaacga 21216080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 31271054 - 31271158
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||||||||||||||||| || ||||| || ||| || ||||||||||||| |||||||||||||  |||||||||||||||||||||  |||||||||    
T  31271054 actaactataattaataagagtattttagtatatgatattaattttaccatt-aaaatcaacacaatcaatcattttcttaataatcgtacacaaacctt 31271152  T
Q  171 aaacga 176  Q
    ||||||    
T  31271153 aaacga 31271158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 31082652 - 31082763
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||||||||||| ||||| | |||||||||| || |||||||||| |||| ||||||||| |||||| |||||| ||||||| |    
T  31082652 actaactataattaataagggtgttttagtaaataccactaattttatca-ttaaaatcaagacaattaatcatttccttaattatcgtgcacaaaccat 31082750  T
Q  171 aaacgaataatat 183  Q
    |||| | ||||||    
T  31082751 aaacaactaatat 31082763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 14855017 - 14854916
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| |||||||||  |||||| | ||||||||||||| |||||||||||||  | |||||||||| |||||||||||||||||||    
T  14855017 actaactacaattaataaaggtgttttagcaaatgcaattaattttaccatt-aaaatcaacacaatgattcattttcttgataatcgtgtacaaacctt 14854919  T
Q  171 aaa 173  Q
    |||    
T  14854918 aaa 14854916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 10180030 - 10179926
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| || ||||| |||||  |||||||||||||||| ||| |||| |||| || |||||||||||||||||||| |||||||||    
T  10180030 actaactacaattaataagtgtattttagtaaattatactaattttaccattgaaa-tcaatacaactactcattttcttaataatcgtgcacaaacctt 10179932  T
Q  171 aaacga 176  Q
    ||||||    
T  10179931 aaacga 10179926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 13335245 - 13335353
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    |||||||||||  |||||||||  |||||||| |||||| |||||||||||||||  ||||||||||||| ||| ||||| ||||||||||||| | |||    
T  13335245 ctctactaactgcaattaataaatgtgttttactaaatgatactaattttaccatc-aaaatcaacacaattaaccatttccttaataatcgtgcataaa 13335343  T
Q  167 ccttaaacga 176  Q
    ||||||||||    
T  13335344 ccttaaacga 13335353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 40996448 - 40996344
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||  |||||||||| |||| ||||||||||||| ||||||||| ||||| ||| ||| | |||||||    
T  40996448 actaactacaattaataagggtgttttagtaaatgaaactaatttta-cattcaaaatcaacacaattaatcatttccttaacaattgtgcataaacctt 40996350  T
Q  171 aaacga 176  Q
    ||||||    
T  40996349 aaacga 40996344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 51146 - 51247
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||  |||||||  |||||| |||| |||||||   ||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  51146 actaactacaattaataaatgtgtttttgtaaatgatacttattttaca--ttaaaatcaacacaattaatcattttcttaataatcgtgcacaaacctt 51243  T
Q  171 aaac 174  Q
    ||||    
T  51244 aaac 51247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 32476322 - 32476424
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||||||| |||||||||||| || |||||||| |||| ||| |||||| ||  ||||||||||||||||| |||| |||||||||||    
T  32476322 taactacaattaataagggtattttaataaatgatattaattttatcattgaaa-tcaacagaatcaatcattttcttaataaccgtgcacaaaccttaa 32476420  T
Q  173 acga 176  Q
    ||||    
T  32476421 acga 32476424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 44761577 - 44761503
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattt 146  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| |||||||||    
T  44761577 actaactacaattaataagggtgttttagtaaatgctactaattttacca-ttgaaatcaacacaattaatcattt 44761503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 17719341 - 17719237
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||| | ||||| |||||  |||||| ||||||||| |||||||  |||| |||||||||| |||||||||||| ||||| |||    
T  17719341 actaactataattaataaggatattttagtaaataatactaactttaccatt-aaaatcattacaattaatcatttttttaataatcgtgcacaaatctt 17719243  T
Q  171 aaacga 176  Q
    ||||||    
T  17719242 aaacga 17719237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 22771918 - 22771814
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||||||| | ||||||||| ||| |||||| || ||||||||  ||| | |||||||    
T  22771918 actaactacaattaataagggtgttttaataaatgacactaattttacca-tcaaaatcaacccaattaatcaattccttaataactgtgcataaacctt 22771820  T
Q  171 aaacga 176  Q
    ||||||    
T  22771819 aaacga 22771814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 26626195 - 26626091
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | |||||||||||  ||| |||||||||||  ||| ||||||||| ||||||||| ||||||||||||| | |||||||    
T  26626195 actaactacaattaataaggatattttaataaattatacaaattttaccatc-aaattcaacacaattaatcatttccttaataatcgtgcataaacctt 26626097  T
Q  171 aaacga 176  Q
    ||||||    
T  26626096 aaacga 26626091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 34948770 - 34948666
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||  ||||||   |||||| |||||||||||| ||||||| ||||||||| ||||||||| ||||||||| ||||||||| |||    
T  34948770 actaactacaattaataaatgtgtttctgtaaatgatactaattttactatttaaa-tcaacacaattaatcatttccttaataattgtgtacaaatctt 34948672  T
Q  171 aaacga 176  Q
    ||||||    
T  34948671 aaacga 34948666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 39405795 - 39405906
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||||| |||||||||| | | || || |||||| ||||||||||| |||| ||| | ||||||| ||||||||| ||||||||||||| |||||||||    
T  39405795 actaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaatt-aacacaattaatcatttccttaataatcgtgcacaaacctt 39405893  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  39405894 aaacgactaatat 39405906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 73 - 160
Target Start/End: Complemental strand, 34394035 - 34393949
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||||||||||| ||||||||| |||||  |||||||||||||| | ||||||||||||| ||||||||| |||||||| ||||    
T  34394035 taactataattaataaaggtgttttagtaaattatactaattttacca-tcaaaatcaacacaattaatcatttccttaataaccgtg 34393949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 36967413 - 36967498
Alignment:
Q  90 ggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||| |||||| || ||||||||||||  ||||||||||||| ||||||||| ||||||||||||| | |||||||||||||    
T  36967413 ggtgttttagtaaatgatattaattttaccatc-aaaatcaacacaattaatcatttccttaataatcgtgcataaaccttaaacga 36967498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 2767374 - 2767286
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| || |||||||| |||||||||||||| |||||||||||||| | ||||||||||||| |||| |||| |||||||| ||||    
T  2767374 actaactacaaataataaggatgttttaataaatgatactaattttacca-tcaaaatcaacacaattaattatttccttaataaccgtg 2767286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 10098074 - 10097970
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||||||||| || |||||| || ||||||||||| | |||||||| |||| |||||||||||||||||| | || |  ||||||    
T  10098074 actaactacaattaataagggtgttatagtaaatgatattaattttacca-tcaaaatcaatacaattaatcattttcttaataaccatgcatcaacctt 10097976  T
Q  171 aaacga 176  Q
    ||||||    
T  10097975 aaacga 10097970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 7703233 - 7703135
Alignment:
Q  77 tataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||||||||||| ||||| |||||| || ||||||||||| || |||||||||||| |||| |||| |||||||||| |  |||||| ||||||||    
T  7703233 tataattaataagggtattttagtaaatgatattaattttacca-ttgaaatcaacacaattaattatttccttaataatcttacacaaactttaaacga 7703135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 4428434 - 4428354
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||||| |||||||||  || ||||| |||||| || |||||||| |||| |||||||||||||||||||||||||||||    
T  4428434 actaactacaattaataattgtattttagtaaatgataataattttatcatt-aaaatcaacacaaataatcattttcttaa 4428354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 174
Target Start/End: Original strand, 7172949 - 7173049
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||||||   ||||||| |||||||||||||||||| || || |||||||||||| |||||||||  ||||||||  |  |||||||||||    
T  7172949 taactacaattaataaatatgttttagtaaatgctactaattttatca-ttgaaatcaacacaattaatcatttctttaataatgatacacaaaccttaa 7173047  T
Q  173 ac 174  Q
    ||    
T  7173048 ac 7173049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 31231763 - 31231851
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| ||||||||||||||||| | |||||| || ||||||||||| | |||||| |||||| | ||||||| |||||||| ||||    
T  31231763 actaactacaattaataagggtgtttcagtaaatgatattaattttacca-tcaaaatcgacacaattcatcatttccttaataaccgtg 31231851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 32678787 - 32678855
Alignment:
Q  107 tactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||| |||||||||  ||||||||||||| ||||||||| ||||||||||||||| |||| ||||||||    
T  32678787 tactagttttaccatc-aaaatcaacacaattaatcatttccttaataatcgtgtataaactttaaacga 32678855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 45405878 - 45405789
Alignment:
Q  274 agaaatgatatttgtacatccattt-gtgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||||| |||||| |  |||||||| ||||| ||| | ||||| ||||||| ||||||||  ||||||||||||||||    
T  45405878 agaaatgatatttgtacaaccattttgatacaactttttctctcatactcacattatgtttttattctctctttattgtttttgaccaat 45405789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 183
Target Start/End: Original strand, 1739709 - 1739784
Alignment:
Q  107 tactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatat 183  Q
    |||||||||||||||| ||| ||||||||| |||| |||| ||||||||||||  |||||||||| |||| ||||||    
T  1739709 tactaattttaccattgaaa-tcaacacaattaattatttccttaataatcgtacacaaaccttagacgactaatat 1739784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 72 - 152
Target Start/End: Complemental strand, 5053235 - 5053156
Alignment:
Q  72 ctaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    ||||||| ||||||||||  ||||||| |||||| || ||||||||||| | ||||||||||||| ||||||||| |||||    
T  5053235 ctaactacaattaataagactgttttagtaaatgatattaattttacca-tcaaaatcaacacaattaatcatttccttaa 5053156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 6611767 - 6611841
Alignment:
Q  108 actaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatat 183  Q
    ||||||||||||||| ||| |||||| || |||||||||| |||||||||||||  ||| ||||||||| ||||||    
T  6611767 actaattttaccattgaaa-tcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatat 6611841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 41092028 - 41092114
Alignment:
Q  72 ctaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgt 159  Q
    ||||||| |||||||||| || |||||||||||| || ||||||||||| || |||||||||||| ||||| |||  |||| ||||||    
T  41092028 ctaactacaattaataagagtattttaataaatgatattaattttacca-ttgaaatcaacacaattaatcgtttctttaaaaatcgt 41092114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 176
Target Start/End: Complemental strand, 6796101 - 6796024
Alignment:
Q  98 aataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||| || ||||||||||||| ||||||||| |   |||||||||| |||||||||||| |||||| ||||||||    
T  6796101 aataaatgatattaattttaccatt-aaaatcaacgctgttaatcattttattaataatcgtgcacaaacattaaacga 6796024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 10953462 - 10953398
Alignment:
Q  100 taaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaa 165  Q
    ||||||||| ||||| || |||| ||||||||||||| ||||||||| ||||||||||| ||||||    
T  10953462 taaatgctattaattatatcatt-aaaatcaacacaattaatcatttccttaataatcgagtacaa 10953398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 10961467 - 10961403
Alignment:
Q  100 taaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaa 165  Q
    ||||||||| ||||| || |||| ||||||||||||| ||||||||| ||||||||||| ||||||    
T  10961467 taaatgctattaattatatcatt-aaaatcaacacaattaatcatttccttaataatcgagtacaa 10961403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 29226278 - 29226230
Alignment:
Q  107 tactaattttaccatttaaaatcaacacaaataatcattttcttaataat 156  Q
    |||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  29226278 tactaattttaccatc-aaaatcaacacaattaatcattttcttaataat 29226230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 173
Target Start/End: Original strand, 39329065 - 39329153
Alignment:
Q  84 aataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    ||||||||| |||||| ||| | ||||||||||| |||| ||||| ||||||| ||||||||||||||| ||| ||  ||||| ||||||    
T  39329065 aataagggtattttaaaaaacgatactaattttatcatt-aaaattaacacaattaatcattttcttaaaaattgtacacaaaacttaaa 39329153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 40028549 - 40028632
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataat 156  Q
    ||||| || ||||||||| | | ||||||||||||||| ||||||||||| || ||||||||| || |||||||||| ||||||||    
T  40028549 actaaatacaattaataatgatattttaataaatgctattaattttacca-ttgaaatcaacataattaatcatttt-ttaataat 40028632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 7325727 - 7325799
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||||||| ||| | |||||||| ||||| ||| | ||||| ||||||| |||||||||    
T  7325727 agaaatgatatttgtacatccactttataacaactttctctctcatactcacattatgtttttattctctctc 7325799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 39301015 - 39300920
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||| ||||| ||||| |||||| || ||||||||||||  ||| |||||| || |||||||||  |||||||||||  ||||| |||||||||    
T  39301015 aattaattagggttttttagtaaatgatattaattttaccatcgaaa-tcaacataattaatcatttctttaataatcgtacacaaatcttaaacga 39300920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 418
Target Start/End: Original strand, 24503051 - 24503090
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaata 418  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  24503051 gaagttgtcataaaagttgtctcaaatggttattcaaata 24503090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 38174293 - 38174203
Alignment:
Q  274 agaaatgatatttgtacatccatttgt--gacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||||| | || | |  ||||||||| ||||| ||| | ||||| | || || ||||||||||||||||||||||||||    
T  38174293 agaaatgatatttgtacaactatcttttagacaactttctctctcatactcacattatattcttattctctctccattgtttttgaccaat 38174203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 173
Target Start/End: Complemental strand, 39465841 - 39465793
Alignment:
Q  123 taaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    |||||||||||||| ||||||||||||||||||  |||| |||||||||||    
T  39465841 taaaatcaacacaattaatcattttcttaataa--gtgtgcaaaccttaaa 39465793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 396692 - 396611
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||| ||||||||||| | || || |||||| |||||||||||||  || ||||||||| || ||||||||| ||||||||    
T  396692 taactacaattaataaggatattgtagtaaatgatactaattttacc-gttgaaatcaacataattaatcatttccttaataa 396611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 5502372 - 5502426
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacatt 327  Q
    |||||||||||||||||| ||| |||||||||||||| ||||| ||||| |||||    
T  5502372 agaaatgatatttgtacaaccactttgtgacaactttctctctcatattcacatt 5502426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 41541870 - 41541916
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttata 319  Q
    |||||||||||||| ||||||| |||||||||||||| |||||||||    
T  41541870 agaaatgatatttgaacatccattttgtgacaactttctctcttata 41541916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 335
Target Start/End: Original strand, 43419880 - 43419942
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgttttt 335  Q
    |||||||||||||||||| | | |||||||||| ||| ||||||||| ||||||| |||||||    
T  43419880 agaaatgatatttgtacaactaatttgtgacaattttctctcttatacttacattatgttttt 43419942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 152
Target Start/End: Complemental strand, 4924154 - 4924070
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    ||||| |||||| ||||||||| | | ||||| |||||  |||||||||||||| |||||||  |||||| |||| ||||||||||    
T  4924154 ctctattaactacaattaataaagatattttagtaaataatactaattttacca-ttaaaatatacacaactaataattttcttaa 4924070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 162
Target Start/End: Original strand, 11649643 - 11649731
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgta 162  Q
    |||| ||||||||||||||||||||| |||||| |||  ||||||  | ||||||||||| | | |||| ||||| ||||||| ||||||    
T  11649643 taaccataattaataagggtgttttagtaaatgatacacattttatta-ttaaaatcaaccctattaattatttttttaataaccgtgta 11649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 432
Target Start/End: Complemental strand, 41675303 - 41675254
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaaaat 432  Q
    ||||||||||| |||| | ||||| |||||||||||||| ||||||||||    
T  41675303 ttgtcacaaaaattgtttaaaatggttattcaaatatcagtactcaaaat 41675254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 5502496 - 5502544
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||||||| || | |||||||||| ||||||||||| |||||    
T  5502496 gaagttgtcacaaaaattatatcaaatgattgttcaaatatcactactc 5502544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 5740844 - 5740761
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgttttt--gttctctctccattgtttt 354  Q
    |||||||||||||||||| ||| ||| |||||||||| ||||| ||| | ||||| |||||||   ||||||||| ||||||||    
T  5740844 agaaatgatatttgtacaaccactttttgacaactttttctctcatactcacattatgtttttactttctctctctattgtttt 5740761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 11223796 - 11223748
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||  |||||||||||||||| |||| ||||||||||| |||||    
T  11223796 gaagttgtaccaaaagttgtctcaaaagattgttcaaatatcactactc 11223748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 17492529 - 17492565
Alignment:
Q  273 aagaaatgatatttgtacatccatttgtgacaacttt 309  Q
    |||||||||||||||||||  ||||||||||||||||    
T  17492529 aagaaatgatatttgtacaatcatttgtgacaacttt 17492565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 21648867 - 21648815
Alignment:
Q  380 aagttgtcac-aaaagttgtctcaaatgattattcaaatatcaatactcaaaa 431  Q
    |||||||||| ||||||||||||||||| || || |||||||| |||||||||    
T  21648867 aagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactcaaaa 21648815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 22706299 - 22706243
Alignment:
Q  274 agaaatgatatttgtacatccattt-gtgacaactttatctcttatatttacattgt 329  Q
    |||||||||||||| | |||||||| ||||||||||||||||| ||| | |||||||    
T  22706299 agaaatgatatttgaatatccatttagtgacaactttatctctcatactcacattgt 22706243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 23258166 - 23258214
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||||||| |||| ||||||| || ||||||||||| |||||    
T  23258166 gaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactactc 23258214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 428
Target Start/End: Original strand, 40102158 - 40102206
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    ||||||||||||||||||||||| ||| || |||||||| || ||||||    
T  40102158 aagttgtcacaaaagttgtctcatatggttgttcaaataacactactca 40102206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 43403918 - 43403966
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||| |||||||||||||||  || ||||||||||| |||||    
T  43403918 gaagttgtcacgaaagttgtctcaaatagttgttcaaatatcactactc 43403966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 79; Significance: 1e-36; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 17070 - 17179
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||| || |||||||||||    
T  17070 taactataattaataagggtgttctaataaatgctactaattttacca-ttgaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaa 17168  T
Q  173 acgaataatat 183  Q
    |||| ||||||    
T  17169 acgactaatat 17179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 40530304 - 40530177
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||| ||| |||||    
T  40530304 actaactacaattaataagggtgttttagtaaatgctactaattttacca-ttgaaatcaacacaattaatcattttcttaataatcgtgcacagacctt 40530206  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    ||||||  |||||  | ||||||||||||    
T  40530205 aaacgacaaatattgtgagacggagggag 40530177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 7828006 - 7827902
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  7828006 actaactacaattaataagggtattttaataaatgatactaattttaccattgaaa-tcaacacaattaattattttcttaataatcgtgtacaaacctt 7827908  T
Q  171 aaacga 176  Q
    ||||||    
T  7827907 aaacga 7827902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 4818584 - 4818711
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||| || || |||||||||||| |||| |||| ||||||||||||| |||||||||    
T  4818584 actaactacaattaataagggtgttttagtaaatgctactaatttta-caattgaaatcaacacaattaattatttccttaataatcgtgcacaaacctt 4818682  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    ||||||  |||||  | ||||||||||||    
T  4818683 aaacgacaaatattgtgagacggagggag 4818711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 75 - 176
Target Start/End: Complemental strand, 2232149 - 2232049
Alignment:
Q  75 actataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaac 174  Q
    |||| |||||||||| || ||||||||||||||||||||||||||||| ||| ||||||||| || |||||||||||||||||||| |||||||||||||    
T  2232149 actaaaattaataagagttttttaataaatgctactaattttaccattgaaa-tcaacacaattattcattttcttaataatcgtgcacaaaccttaaac 2232051  T
Q  175 ga 176  Q
    ||    
T  2232050 ga 2232049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 81 - 196
Target Start/End: Original strand, 9515789 - 9515903
Alignment:
Q  81 attaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataa 180  Q
    |||||||||| ||||||| |||||| |||||||||||||||| ||| ||||||||| |||||||| |||||||||||||| ||||||||||||||| |||    
T  9515789 attaataaggatgttttagtaaatgatactaattttaccattgaaa-tcaacacaattaatcattatcttaataatcgtgcacaaaccttaaacgactaa 9515887  T
Q  181 tatcatcagacggagg 196  Q
    |||  | |||||||||    
T  9515888 tattgtgagacggagg 9515903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 8698342 - 8698469
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||  ||||||| ||||||||||||| || |||||||||||| |||||||||  |||||||||||| |||||||||    
T  8698342 actaactacaattaataagggtgttttggtaaatgcaactaattttacca-ttgaaatcaacacaattaatcatttctttaataatcgtgcacaaacctt 8698440  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||| |  |||||  | ||||||||||||    
T  8698441 aaacaacaaatattgtgagacggagggag 8698469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 41496113 - 41496224
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| | ||||||| ||||||| ||||||||||||||| ||| ||||||||| |||| ||||| ||||||||||||||||||||||    
T  41496113 actaactacaattaataatgatgttttactaaatgcaactaattttaccattgaaa-tcaacacaattaattatttttttaataatcgtgtacaaacctt 41496211  T
Q  171 aaacgaataatat 183  Q
    || ||| ||||||    
T  41496212 aatcgactaatat 41496224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 8725089 - 8724987
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| |||||||| |||||| || ||||||||||||| ||| ||||||||| |||||||||  |||||||||||| |||||||||    
T  8725089 actaactacaattaataagtgtgttttagtaaatgatattaattttaccattgaaa-tcaacacaattaatcatttctttaataatcgtgcacaaacctt 8724991  T
Q  171 aaac 174  Q
    ||||    
T  8724990 aaac 8724987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 22848462 - 22848353
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||| | || |||||||||||| |||||  || |||||||||| ||||||| ||||||    
T  22848462 taactacaattaataagggtgttttaataaatactattaattttacta-ttgaaatcaacacaattaatcgcttccttaataatcttgtacaagccttaa 22848364  T
Q  173 acgaataatat 183  Q
    |||| ||||||    
T  22848363 acgactaatat 22848353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 40899951 - 40900052
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||| ||| | ||||||||||||| ||||||||| |||||||| |||| | |||||||    
T  40899951 actaactacaattaataagggtgttttagtaaatgatactaattttgcca-tcaaaatcaacacaattaatcatttccttaataaccgtgcataaacctt 40900049  T
Q  171 aaa 173  Q
    |||    
T  40900050 aaa 40900052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 27542828 - 27542932
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| || ||||| |||||| || ||||||||||||| ||| |||||||||  |||||||| ||||||||||||| |||||||||    
T  27542828 actaactacaattaataagagtattttagtaaatggtattaattttaccattgaaa-tcaacacaatcaatcatttccttaataatcgtgcacaaacctt 27542926  T
Q  171 aaacga 176  Q
    ||||||    
T  27542927 aaacga 27542932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 29570427 - 29570536
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||| |||||||||  |||| ||| |||||||| |||| ||||||||||||| |||||||||  |||||||||||| ||||| |||||    
T  29570427 taactacaattaataaaggtgttttagcaaatactaataattttaacatt-aaaatcaacacaattaatcatttctttaataatcgtgcacaaatcttaa 29570525  T
Q  173 acgaataatat 183  Q
    |||| ||||||    
T  29570526 acgactaatat 29570536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 6753738 - 6753635
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| |||||| |||||||||||||||| ||| | || | || ||||||||||||||||||||||| | |||||||    
T  6753738 actaactacaattaataagggtattttagtaaatgatactaattttaccattgaaatt-aata-aattaatcattttcttaataatcgtgcataaacctt 6753641  T
Q  171 aaacga 176  Q
    ||||||    
T  6753640 aaacga 6753635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 182
Target Start/End: Complemental strand, 15818553 - 15818450
Alignment:
Q  80 aattaataagggtgttttaataaat--gctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaa 177  Q
    ||||||||| ||||||||| |||||  |||||||||||||||||| ||| ||||||||| ||| ||||| ||||||||||||| | |||||||||||||     
T  15818553 aattaataaaggtgttttagtaaatatgctactaattttaccattgaaa-tcaacacaattaaacatttccttaataatcgtgcataaaccttaaacgac 15818455  T
Q  178 taata 182  Q
    |||||    
T  15818454 taata 15818450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 6615960 - 6615866
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    |||||||| ||||||||||| ||||||  ||||||||||||||||||||| || |||||||||||| |||| ||||  |||||||||||| |||||    
T  6615960 actaactaaaattaataaggatgttttggtaaatgctactaattttacca-ttgaaatcaacacaattaattatttatttaataatcgtgcacaaa 6615866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 1248684 - 1248580
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| |||||| || ||||||||||| || ||||||||| || |||| |||| |||||||| |||| ||||| |||    
T  1248684 actaactacaattaataagggtattttagtaaatgatattaattttacca-ttgaaatcaacataattaataatttccttaataaccgtgcacaaatctt 1248586  T
Q  171 aaacga 176  Q
    ||||||    
T  1248585 aaacga 1248580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 6315857 - 6315753
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| |||||| || |||||||| |||| ||| | |||||||  |||||||| ||||||||||| |||||| ||||    
T  6315857 actaactacaattaataagggtattttagtaaatgatattaattttatcattgaaatt-aacacaatcaatcatttccttaataatcgagtacaaccctt 6315759  T
Q  171 aaacga 176  Q
    ||||||    
T  6315758 aaacga 6315753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 29374375 - 29374486
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| ||| ||||| ||||||||| |||||||| |||| ||| |||||| || |||||||||||||||||| | |  | |||||||    
T  29374375 actaactacaattaataaaggtcttttagtaaatgctattaattttatcattgaaa-tcaacataattaatcattttcttaataaccttaaataaacctt 29374473  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  29374474 aaacgactaatat 29374486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 31655086 - 31655197
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | || || |||||| || ||||||||||||| ||| ||||||||| |||||||||  |||||||||||  |||||| ||    
T  31655086 actaactacaattaataaggatattatagtaaatgatattaattttaccattgaaa-tcaacacaattaatcatttctttaataatcgtacacaaacttt 31655184  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  31655185 aaacgactaatat 31655197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 38508266 - 38508163
Alignment:
Q  72 ctaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctta 171  Q
    ||||||| |||||||||| || ||||||| | || |||||||||||||||| ||| | ||||||| ||||||||||||||| ||||| | ||||| ||||    
T  38508266 ctaactacaattaataagagtattttaatgagtgatactaattttaccattgaaatt-aacacaattaatcattttcttaaaaatcgagcacaaatctta 38508168  T
Q  172 aacga 176  Q
    |||||    
T  38508167 aacga 38508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 27580633 - 27580735
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa-taatcgtgtacaaacct 169  Q
    |||||||| ||||||||||||| ||||| |||||| || ||||||||||| || |||||||||||| ||||||||| || || |||||||| | ||||||    
T  27580633 actaactacaattaataagggtattttagtaaatgatattaattttacca-ttgaaatcaacacaattaatcatttcctaaattaatcgtgcagaaacct 27580731  T
Q  170 taaa 173  Q
    ||||    
T  27580732 taaa 27580735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 41062243 - 41062161
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttctta 151  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||||||| || | |||||||||| || |||| |||||||||    
T  41062243 tctactaactacaattaataagggtgttttagtaaatgatactaattttatca-tcaaaatcaacataattaattattttctta 41062161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 19929979 - 19930067
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| ||||||||||| ||||||| ||||||   ||| |||||||||  |||||||||| || |||||||||||||||||||||||    
T  19929979 actaactacaattaataaggatgttttagtaaatgacgctagttttaccatc-aaaatcaacaaaattaatcattttcttaataatcgtg 19930067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 21060663 - 21060767
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| || ||||| |||||  |||||||||||||| | ||||| ||||||| ||||||||| | |||||| |||| | |||||||    
T  21060663 actaactacaattaataagagtattttagtaaataatactaattttacca-tcaaaataaacacaattaatcatttccctaataaccgtgcataaacctt 21060761  T
Q  171 aaacga 176  Q
    ||||||    
T  21060762 aaacga 21060767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 8361876 - 8361837
Alignment:
Q  24 ccttttctttcctaactgcaagtaacttggttctgtggtg 63  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8361876 ccttttctttcctaactgcaagtaacttggttctgtggtg 8361837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 362
Target Start/End: Complemental strand, 33567280 - 33567193
Alignment:
Q  276 aaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||| ||| |||||||||||||| ||||| ||| | ||||| |  | || ||||||||||||||||||||||||||    
T  33567280 aaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattattctcttattctctctccattgtttttgaccaat 33567193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 843523 - 843597
Alignment:
Q  125 aaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatatcatcagacggagggag 199  Q
    ||||||||| || ||||||||||||||||||||||| ||||||||||||| | || |||  | ||||||||||||    
T  843523 aaatcaacaaaattaatcattttcttaataatcgtgcacaaaccttaaacaattattattgtgagacggagggag 843597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 199
Target Start/End: Original strand, 32440173 - 32440301
Alignment:
Q  70 tactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacct 169  Q
    |||||| || ||||||||||||| ||||| |||||| || |||||||| || || |||| ||||||| |||||||||  |||| |||| || ||||||||    
T  32440173 tactaagtacaattaataagggtattttagtaaatgatattaattttatca-ttgaaattaacacaattaatcatttctttaaaaatcatgcacaaacct 32440271  T
Q  170 taaacgaataatatcatcagacggagggag 199  Q
    | ||||| || |||  | ||||||||||||    
T  32440272 ttaacgactattattttgagacggagggag 32440301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 379 - 436
Target Start/End: Original strand, 39595408 - 39595465
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaaaatttat 436  Q
    |||||||||||||||||||| ||||||| || ||||||||||| |||||||| |||||    
T  39595408 gaagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactcaaattttat 39595465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 73 - 174
Target Start/End: Complemental strand, 42803698 - 42803598
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||| ||||||||| ||||| |||||||||||| || || |||| ||||||| |||| ||||  || ||||||||| | |||||||||    
T  42803698 taactacaattaataatggtgttttagtaaatactactaatttta-caattgaaatgaacacaattaattatttctttgataatcgtgcataaaccttaa 42803600  T
Q  173 ac 174  Q
    ||    
T  42803599 ac 42803598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 42922894 - 42922843
Alignment:
Q  125 aaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||||||| |||||||||||||||||||| || ||||| |||||||||    
T  42922894 aaatcaacacaattaatcattttcttaataatcatgcacaaatcttaaacga 42922843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 18890612 - 18890555
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||||||||| |||||||||||||| |||||| |||| ||| |||||||||||||||    
T  18890612 ttttaataaatgatactaattttacca-ttaaaaacaactcaactaatcattttcttaa 18890555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 278 - 362
Target Start/End: Original strand, 7080546 - 7080631
Alignment:
Q  278 atgatatttgtacatccatttgtg-acaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    ||||||||||||||  ||||| || |||||||| ||||| ||| | ||||| | || || ||||||||||||||||||||||||||    
T  7080546 atgatatttgtacaatcatttttgtacaactttctctctcatactcacattatcttcttattctctctccattgtttttgaccaat 7080631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 18841512 - 18841592
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||||| ||||||||| ||| ||||| |||||| || |||||||||||||| ||||||| | || |||||||||| ||||    
T  18841512 actaactacaattaataacggtattttattaaatgatattaattttaccattt-aaatcaatataattaatcatttttttaa 18841592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 24431555 - 24431506
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    ||||||||||||| |||||||||||||| || ||||||||||| ||||||    
T  24431555 gaagttgtcacaatagttgtctcaaatggttgttcaaatatcactactca 24431506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 39458669 - 39458758
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    ||||||||||| |||||| ||| ||| |||||||||| ||||| ||| | ||||| |  | || ||||||||||||||||||||||||||    
T  39458669 agaaatgatatctgtacaaccagtttttgacaactttctctctcatactcacattatcctcttattctctctccattgtttttgaccaat 39458758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 6754062 - 6754160
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| |||||||| ||||||  | ||||||||| ||| ||| |||||| || |||||||||||||| |||| ||| | |||||||    
T  6754062 actaactacaattaataagagtgttttagtaaatgacattaattttactattgaaa-tcaaca-aattaatcattttcttattaatagtgcataaacctt 6754159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 306
Target Start/End: Original strand, 14073053 - 14073085
Alignment:
Q  274 agaaatgatatttgtacatccatttgtgacaac 306  Q
    |||||||||||||||||||||||||||||||||    
T  14073053 agaaatgatatttgtacatccatttgtgacaac 14073085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 20719952 - 20719904
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||||||||||||||||||||  | ||||||||||| |||||    
T  20719952 gaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactc 20719904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 2588141 - 2588044
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||       |||||||||||||  ||||||||||||| ||||||||| ||||||||  ||| |  ||||||    
T  2588141 actaactacaattaataagggtgttttagta-------ctaattttaccatc-aaaatcaacacaattaatcatttccttaataactgtgcatcaacctt 2588050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 152
Target Start/End: Complemental strand, 26285556 - 26285478
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||| |||||||| | ||||||| ||||||| |||||||||||||  ||||||||||  ||| |||||||||| ||||    
T  26285556 taactacaattaatacgtgtgttttcataaatgatactaattttacc-gttaaaatcaagtcaactaatcattttattaa 26285478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 296 - 362
Target Start/End: Complemental strand, 2117660 - 2117594
Alignment:
Q  296 tttgtgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||| ||||| ||| | ||||| | || || ||||||||||||||||||| ||||||    
T  2117660 tttgtgacaactttctctctcatactcacattatattcttattctctctccattgtttttaaccaat 2117594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 41478883 - 41478964
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||| ||||||  ||||||||||||||| ||| | | ||||| ||||||||||||||| ||||| | |||||||||| ||||    
T  41478883 ttttagtaaatgacactaattttaccattgaaa-taagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacga 41478964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 41492358 - 41492439
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||| ||||||  ||||||||||||||| ||| | | ||||| ||||||||||||||| ||||| | |||||||||| ||||    
T  41492358 ttttagtaaatgtcactaattttaccattgaaa-taagcacaattaatcattttcttaaaaatcgcgcacaaaccttagacga 41492439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 345
Target Start/End: Complemental strand, 12718412 - 12718367
Alignment:
Q  300 tgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||| ||||| ||||| ||||||| |||||||||    
T  12718412 tgacaactttatctctcatattcacattatgtttttattctctctc 12718367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 37184162 - 37184058
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    |||| |||||| ||| ||||| | | ||||| |||||| || ||||||||||| || |||||||| ||| |||||||||| |||| |||| || |||||     
T  37184162 tctattaactacaatgaataaagatattttagtaaatgatattaattttacca-ttgaaatcaactcaattaatcatttttttaaaaatcttgcacaaaa 37184064  T
Q  168 cttaaa 173  Q
    ||||||    
T  37184063 cttaaa 37184058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 125226 - 125278
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaaaa 431  Q
    ||||||||| |||||||||| ||||||| || ||||||||||| |||| ||||    
T  125226 gaagttgtcgcaaaagttgtatcaaatggttgttcaaatatcactactaaaaa 125278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 2117577 - 2117529
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||||||| ||||||  || ||||||||||| |||||    
T  2117577 gaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactc 2117529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 9403647 - 9403695
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||||||| ||||||| || || |||||||| |||||    
T  9403647 gaagttgtcacaaaagttgtatcaaatggttgtttaaatatcactactc 9403695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 15439390 - 15439299
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||||||  || ||||| |||||| |||||||||||||| || |||| || |||| ||||||||| |||||  |||||| ||||| |||||    
T  15439390 aattaataaaagtattttagtaaatgatactaattttacca-ttgaaattaatacaattaatcatttccttaaatatcgtgcacaaaacttaa 15439299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 430
Target Start/End: Original strand, 16202854 - 16202906
Alignment:
Q  379 gaagttgtcac-aaaagttgtctcaaatgattattcaaatatcaatactcaaa 430  Q
    ||||||||||| ||||||||| | |||||||| ||||||||||| ||||||||    
T  16202854 gaagttgtcactaaaagttgtatgaaatgattgttcaaatatcactactcaaa 16202906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 430
Target Start/End: Original strand, 22402774 - 22402822
Alignment:
Q  383 ttgtcacaaaagttgtc-tcaaatgattattcaaatatcaatactcaaa 430  Q
    ||||||||||||||||| |||||| ||||| ||||||||| ||||||||    
T  22402774 ttgtcacaaaagttgtcatcaaataattatacaaatatcattactcaaa 22402822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 31747969 - 31748041
Alignment:
Q  126 aatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatatcatcagacggaggga 198  Q
    ||||||||||| ||||||||| |||||||||   | | ||| ||||||||||||||||  | |||||||||||    
T  31747969 aatcaacacaattaatcatttccttaataatgacgcataaatcttaaacgaataatattgtgagacggaggga 31748041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 43253945 - 43253818
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||| |||||||||    
T  43253945 actaactacaattaataagggtgttttagtaaatgctactaattttacca-ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaacctt 43253847  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    ||||||  |||||  | ||||||||||||    
T  43253846 aaacgatcaatattgtgagacggagggag 43253818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 10366717 - 10366620
Alignment:
Q  78 ataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||||||| ||||||||||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  10366717 ataattaataagagtgttttaataaatgatactaattttaccattgaaa-tcaacacaattaatcattttcttaataatcgtgcacaaaccttaaacga 10366620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 37311983 - 37312094
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||| | |||||||    
T  37311983 actaactacaattaataagggttttttagtaaatgctactaattttacca-ttgaaatcaacacaattaatcatttccttaataatcgtgcataaacctt 37312081  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  37312082 aaacgactaatat 37312094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 19823044 - 19823146
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||||| |||||||| ||||||  ||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  19823044 actaactacaattaataagggtgttttagtaaatgatactaattctaccatc-aaaatcaacacaattaatcatttccttaataatcgtgcacaaacctt 19823142  T
Q  171 aaac 174  Q
    ||||    
T  19823143 aaac 19823146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 8679136 - 8679032
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||| | ||||| ||||||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||| | ||| |||    
T  8679136 actaactataattaataaggatcttttagtaaatgctactaattttacca-ttgaaatcaacacaattaatcatttccttaataatcgtgcataaatctt 8679038  T
Q  171 aaacga 176  Q
    ||||||    
T  8679037 aaacga 8679032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 77 - 199
Target Start/End: Original strand, 27471374 - 27471495
Alignment:
Q  77 tataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||||||| |||||||| ||||||| |||||||| |||||| ||| |||||| || ||||||||||||||||||||||| ||||| |||||||||    
T  27471374 tataattaataagagtgttttagtaaatgcaactaatttcaccattgaaa-tcaacataattaatcattttcttaataatcgtgcacaaatcttaaacga 27471472  T
Q  177 ataatatcatcagacggagggag 199  Q
     |||| |  | ||||||||||||    
T  27471473 ttaatgttgtgagacggagggag 27471495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 37695748 - 37695643
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtac-aaacct 169  Q
    |||||||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||||||| ||||||||| ||||||||||||| || ||||||    
T  37695748 actaactacaattaataagggtgttttagtaaatgatattaattttacca-ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaaacct 37695650  T
Q  170 taaacga 176  Q
    |||||||    
T  37695649 taaacga 37695643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 30190742 - 30190638
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| |||||| |||||||||||||| || |||||||||||| ||||||||| ||| |||| |||| |||||||||    
T  30190742 actaactacaattaataagggtattttagtaaatgatactaattttacca-ttgaaatcaacacaattaatcatttccttcataaccgtgcacaaacctt 30190644  T
Q  171 aaacga 176  Q
    ||||||    
T  30190643 aaacga 30190638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 52290926 - 52291030
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||| | |||||||| |||| |||||||||||||||||| |||  |  ||||||    
T  52290926 actaactataattaataaggctgttttaataaatggtactaattttacca-tcaaaatcaatacaattaatcattttcttaataaccgtacatcaacctt 52291024  T
Q  171 aaacga 176  Q
    ||||||    
T  52291025 aaacga 52291030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 11632114 - 11632240
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| ||||||||| ||||| ||||||||||||||  || |||||||||||| |||||||||| |||||||||||| ||||| |||    
T  11632114 actaactacaattaataaaggtgttttagtaaatactactaattttacc-gttgaaatcaacacaattaatcatttt-ttaataatcgtgcacaaatctt 11632211  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    ||| || |||||| || |||||| |||||    
T  11632212 aaatgactaatattatgagacggtgggag 11632240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 3313289 - 3313394
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||||||||||||| | ||| ||||||||||||||||| ||| || |||    ||||||||||||||||||||||| |||||||||||    
T  3313289 taactacaattaataagggtgttttagttaattctactaattttaccattgaaa-tcgaca----taatcattttcttaataatcgtgcacaaaccttaa 3313383  T
Q  173 acgaataatat 183  Q
    |||| ||||||    
T  3313384 acgactaatat 3313394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 29024047 - 29023944
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||  ||||||| |||||| |||||||||||||||  ||||||||||||| |||||||||| |||||||||||| | |||||||    
T  29024047 actaactacaattaataaga-tgttttagtaaatgatactaattttaccatc-aaaatcaacacaattaatcatttttttaataatcgtgcataaacctt 29023950  T
Q  171 aaacga 176  Q
    ||||||    
T  29023949 aaacga 29023944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 23004464 - 23004354
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| || || ||||||||||||||| || ||||| |||||| ||||||||| ||||||||| ||  |||||||||    
T  23004464 actaactacaattaataagggtgttttagtatatactactaattttacca-ttgaaatcgacacaattaatcatttccttaataatagt-aacaaacctt 23004367  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  23004366 aaacgactaatat 23004354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 11905857 - 11905959
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||||||||||| |||| |||||| ||||||||||| |||  ||||| ||||||| ||||||||||||||||||||||| | |||| ||||    
T  11905857 taactacaattaataagggtgctttagtaaatgatactaattttatcatc-aaaattaacacaattaatcattttcttaataatcgtgcataaactttaa 11905955  T
Q  173 acga 176  Q
    ||||    
T  11905956 acga 11905959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 36476613 - 36476719
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    |||||||||||| ||||||||||||| ||||| |||||| || ||||||||||| ||  |||||||||||  ||| ||||||||||||| |||| |||||    
T  36476613 ctctactaactacaattaataagggtattttagtaaatgatattaattttacca-ttgcaatcaacacaatcaattattttcttaataaccgtgaacaaa 36476711  T
Q  167 ccttaaac 174  Q
    ||||||||    
T  36476712 ccttaaac 36476719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 53560246 - 53560352
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    |||||||||||||| ||||||||||||||||| |||||| ||| |||||||||| | |||||||||| || ||||||||| |||||| |||||| |  ||    
T  53560246 ctctactaactatatttaataagggtgttttagtaaatgatacaaattttacca-tcaaaatcaacataattaatcatttccttaatcatcgtgcatcaa 53560344  T
Q  167 ccttaaac 174  Q
    ||||||||    
T  53560345 ccttaaac 53560352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 36460496 - 36460387
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||||  | |||||||||||| |||||||||||| ||| ||| | ||||||| |||| |||||||||||||||||| |||||| ||||    
T  36460496 taactacaattaataagaatattttaataaatgttactaattttactattgaaatt-aacacaattaataattttcttaataatcgtgcacaaactttaa 36460398  T
Q  173 acgaataatat 183  Q
    |||| ||||||    
T  36460397 acgactaatat 36460387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 24569182 - 24569094
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| ||||||||||||| ||||| |||||  || ||||||||||||| ||| ||||||||| |||||||||||||||||||||||    
T  24569182 actaactacaattaataagggtattttagtaaataatattaattttaccattgaaa-tcaacacaattaatcattttcttaataatcgtg 24569094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 83 - 199
Target Start/End: Original strand, 1778687 - 1778802
Alignment:
Q  83 taataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataata 182  Q
    |||||||| ||||||| ||||||  | |||||||| |||| ||| ||||||||| ||||||||| |||||||||| || ||||||||||||||| |||||    
T  1778687 taataaggatgttttagtaaatgtcattaattttatcattgaaa-tcaacacaattaatcatttccttaataatcatgcacaaaccttaaacgactaata 1778785  T
Q  183 tcatcagacggagggag 199  Q
    |  | ||||||||||||    
T  1778786 ttgtgagacggagggag 1778802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 75 - 175
Target Start/End: Complemental strand, 37773042 - 37772943
Alignment:
Q  75 actataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaac 174  Q
    |||||||||||||||||| ||||| |||||| || ||||||||||| ||  |||||| |||| ||||||||| |||||||||| || |||||||||||||    
T  37773042 actataattaataagggtattttagtaaatgatattaattttacca-ttgtaatcaatacaattaatcatttccttaataatcatgcacaaaccttaaac 37772944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 74 - 173
Target Start/End: Original strand, 34750532 - 34750630
Alignment:
Q  74 aactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    ||||| ||||||||||| ||||||| |||||| |||||||||||||| |||||||||||||||  ||||||||  | || ||||||| ||||||||||||    
T  34750532 aactacaattaataaggatgttttagtaaatgatactaattttacca-ttaaaatcaacacaatcaatcatttcatcaaaaatcgtgcacaaaccttaaa 34750630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 37497525 - 37497629
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| | |||| || ||||||||| |||||| |||||||||||||||  |||||||||||||  |||||||| ||||||||||||| | ||| |||    
T  37497525 actaactacagttaacaacggtgttttagtaaatgatactaattttaccatc-aaaatcaacacaataaatcatttccttaataatcgtgcataaatctt 37497623  T
Q  171 aaacga 176  Q
    ||||||    
T  37497624 aaacga 37497629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 172
Target Start/End: Original strand, 43719300 - 43719399
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| ||||| | | |||| || ||||||||||||| ||||||||||||| |||||||||| ||||| ||||||||||||| ||    
T  43719300 actaactacaattaataaggatgtttcagtgaatgata-taattttaccatt-aaaatcaacacaattaatcattttattaatgatcgtgtacaaacttt 43719397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 50035299 - 50035172
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||| || ||||||||  ||||||||||||||||||  ||| ||| |||||| || || ||||||||||||||||| || |||||||||    
T  50035299 actaactacaattaacaacggtgttttggtaaatgctactaattttattattgaaa-tcaacataattattcattttcttaataatcatgcacaaacctt 50035201  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    ||| |  ||||||  | ||||||||||||    
T  50035200 aaaagtctaatattgtgagacggagggag 50035172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 12736654 - 12736552
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||| || ||||||||||||| || || |||||| ||||||||||| |||| | ||||||||||| ||||||||| ||||| ||||||| |||||| ||    
T  12736654 actaagtacaattaataagggtattgtagtaaatgatactaattttatcatt-agaatcaacacaattaatcatttccttaaaaatcgtgcacaaacttt 12736556  T
Q  171 aaac 174  Q
    ||||    
T  12736555 aaac 12736552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 28690864 - 28690762
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| | | ||||| |||||| || |||||||||| || ||| ||||||||| |||||||||  |||||||||||| |||||||||    
T  28690864 actaactacaattaataaagatattttagtaaatgatattaattttaccgttgaaa-tcaacacaattaatcatttctttaataatcgtgcacaaacctt 28690766  T
Q  171 aaac 174  Q
    ||||    
T  28690765 aaac 28690762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 33491112 - 33491054
Alignment:
Q  125 aaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatat 183  Q
    |||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  33491112 aaatcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacgactaatat 33491054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 49830162 - 49830267
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttctt-aataatcgtgtacaaacct 169  Q
    |||||||| ||||||||| ||| ||||| |||||| || ||||||||| ||| ||| ||||||||| |||||||||| || |||||||||| |||||| |    
T  49830162 actaactacaattaataatggtattttagtaaatgatattaattttactattgaaa-tcaacacaattaatcattttttttaataatcgtgcacaaacgt 49830260  T
Q  170 taaacga 176  Q
    |||||||    
T  49830261 taaacga 49830267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 45710883 - 45710987
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||  |||||||| |||||| || ||||||||||| | |||||||||| || ||||||||||||||| || |||| |  ||||||    
T  45710883 actaactacaattaataaaagtgttttagtaaatgatattaattttacca-tcaaaatcaacataattaatcattttcttaacaaccgtgcatcaacctt 45710981  T
Q  171 aaacga 176  Q
    ||||||    
T  45710982 aaacga 45710987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 17652785 - 17652885
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| ||||||| |||    ||||| |||||||||  ||||||||||||| ||||||||| ||||||||||||| | ||||||     
T  17652785 actaactacaattaataaggatgttttagtaa----tactagttttaccatc-aaaatcaacacaattaatcatttccttaataatcgtgcataaacctc 17652879  T
Q  171 aaacga 176  Q
    ||||||    
T  17652880 aaacga 17652885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 54726520 - 54726606
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||| ||||||||| | ||||||| |||||| || ||||||||||| | ||||||||||||  |||||||||||||||||| ||||    
T  54726520 taactacaattaataaagatgttttagtaaatgatattaattttacca-tcaaaatcaacacatttaatcattttcttaataaccgtg 54726606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 83 - 173
Target Start/End: Complemental strand, 51838029 - 51837940
Alignment:
Q  83 taataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    |||||||||| ||||| |||||| || |||||||| |||| ||| ||||||||| ||||||||| ||||||| || || ||||||||||||    
T  51838029 taataagggtattttagtaaatgatattaattttatcattgaaa-tcaacacaattaatcatttacttaatactcatgcacaaaccttaaa 51837940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 70 - 174
Target Start/End: Complemental strand, 5323020 - 5322919
Alignment:
Q  70 tactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacct 169  Q
    |||||| ||||||||||||| || ||||| |||||| || |||||||| ||  | ||||||||| || |||||||||  |||||||||||| ||||||||    
T  5323020 tactaattataattaataagtgtattttagtaaatgatattaattttatca-ctgaaatcaacataattaatcattt--ttaataatcgtgcacaaacct 5322924  T
Q  170 taaac 174  Q
    |||||    
T  5322923 taaac 5322919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 107 - 196
Target Start/End: Complemental strand, 51064864 - 51064776
Alignment:
Q  107 tactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatatcatcagacggagg 196  Q
    |||||||||||||| || ||| |||||||| |||||||||| |||||| ||||| | |||| |||||||| |||||| || |||||||||    
T  51064864 tactaattttacca-ttgaaagcaacacaattaatcatttttttaatattcgtgcataaactttaaacgactaatattatgagacggagg 51064776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 183
Target Start/End: Complemental strand, 31158583 - 31158493
Alignment:
Q  91 gtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatat 183  Q
    |||||||| |||||| || ||||||||| ||  ||| ||| ||||| |||||||||| |||||||||||| ||||||||||||||| ||||||    
T  31158583 gtgttttagtaaatgttattaattttactatcgaaa-tcagcacaattaatcatttt-ttaataatcgtgcacaaaccttaaacgactaatat 31158493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 39931662 - 39931745
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    ||||||||||||||||||| ||||||||||||||| |||  ||||| ||| ||||||||||||| | |||| ||||  |||||||    
T  39931662 actaactataattaataagtgtgttttaataaatgatacatattttgcca-ttaaaatcaacactattaataatttctttaataa 39931745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 14194611 - 14194692
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||| |||||| ||||||||||| |||| ||| ||||||||| | |||||||  |||| ||||||| |||||||||||||||    
T  14194611 ttttagtaaatggtactaattttatcattgaaa-tcaacacaattgatcatttctttaaaaatcgtgcacaaaccttaaacga 14194692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 176
Target Start/End: Original strand, 38795380 - 38795481
Alignment:
Q  74 aactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    ||||| ||||||||||||  |||   |||||| |||||||||||||| || |||| ||||||| ||||||||| |||||  |||||| |||||| |||||    
T  38795380 aactacaattaataagggcatttgggtaaatgatactaattttacca-ttgaaataaacacaattaatcatttccttaaatatcgtgcacaaacattaaa 38795478  T
Q  174 cga 176  Q
    |||    
T  38795479 cga 38795481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 354
Target Start/End: Original strand, 42672272 - 42672329
Alignment:
Q  296 tttgtgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttt 354  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||  |||||||    
T  42672272 tttgtgacaactttatctcttatatttacattatattttt-ttctctctctcttgtttt 42672329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 34957536 - 34957640
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||| | ||| | |||||  ||| |||||||||| | ||| ||||||||| ||||||||| |||| |||| ||  | |||||||    
T  34957536 actaactataattaataaggatatttaagtaaattatacaaattttacca-tcaaattcaacacaattaatcatttccttagtaattgtccataaacctt 34957634  T
Q  171 aaacga 176  Q
    ||||||    
T  34957635 aaacga 34957640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 1765405 - 1765477
Alignment:
Q  274 agaaatgatatttgtacatccattt-gtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||| |||   ||||| ||||||| |||||||||    
T  1765405 agaaatgatatttgtacattcattttgtgacaactttctctctcatacgcacattatgtttttattctctctc 1765477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 30711108 - 30711207
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||| ||||||||| |||||| || |||||||| |||| |||||||||| || |||| ||||  |||||||   || |||||||||||    
T  30711108 taactacaattaataatggtgttttagtaaatgatattaattttatcatt-aaaatcaacataattaattatttctttaataacaatgcacaaaccttaa 30711206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 47683802 - 47683861
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtt 332  Q
    |||||||||||||||||| ||| |||||||||||||| ||||| ||| | ||||||||||    
T  47683802 agaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattgtgtt 47683861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 428
Target Start/End: Original strand, 29706037 - 29706086
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    |||||||||||||||||||| ||||||  || ||||||||||| ||||||    
T  29706037 gaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactca 29706086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 31997936 - 31997985
Alignment:
Q  379 gaagttgtca-caaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||| |||||||||||||||||| || ||||||||||| |||||    
T  31997936 gaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactc 31997985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 44301595 - 44301699
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||| || |||| |||||||| ||||| |||||| ||||||||||| || || ||||||||| || |||  |||| ||||| | ||| | |||||||||    
T  44301595 actaattacaattgataagggtattttagtaaatgatactaattttatca-ttgaaatcaacataattaaatatttccttaaaagtcgggcacaaacctt 44301693  T
Q  171 aaacga 176  Q
    ||||||    
T  44301694 aaacga 44301699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 2482744 - 2482708
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaacttt 309  Q
    |||||||||||||||||||||| ||||||||||||||    
T  2482744 agaaatgatatttgtacatccattttgtgacaacttt 2482708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 7231939 - 7231895
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||| ||||||| || ||||||||||| |||||    
T  7231939 ttgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 7231895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 11173584 - 11173624
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatat 419  Q
    |||||||||||||||||||| ||||||| || |||||||||    
T  11173584 gaagttgtcacaaaagttgtatcaaatggttgttcaaatat 11173624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 19609361 - 19609412
Alignment:
Q  100 taaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||| || ||||||||| ||| ||| |||||||||||||||||||||||||    
T  19609361 taaatgatattaattttacgattgaaa-tcaacacaaataatcattttcttaa 19609412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 19611942 - 19612068
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||| | ||||||||||| | ||||| |||||  || |||||||| |||| ||| ||||||||| |||||| |||||||| ||||||  |||||| ||    
T  19611942 actaacaacaattaataaggatattttagtaaattata-taattttaacattgaaa-tcaacacaattaatcactttcttaaaaatcgtacacaaacttt 19612039  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||| | || ||||   ||||||||||||    
T  19612040 aaacaattattatctcgagacggagggag 19612068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 20380826 - 20380778
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||||||| | ||||| || ||||||||||| |||||    
T  20380826 gaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactc 20380778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 23068284 - 23068360
Alignment:
Q  123 taaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatatcatcagacggagggag 199  Q
    ||||||||||| || |||| |||||||| |||||| || |||||| ||||| || |||||| || ||||||| ||||    
T  23068284 taaaatcaacataattaattattttcttgataatcatgcacaaactttaaatgactaatattatgagacggatggag 23068360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Original strand, 24537220 - 24537256
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaacttt 309  Q
    |||||||||||||||||||||| ||||||||||||||    
T  24537220 agaaatgatatttgtacatccactttgtgacaacttt 24537256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 25090086 - 25090046
Alignment:
Q  122 ttaaaatcaacacaaataatcattttcttaataatcgtgta 162  Q
    ||||||| ||||| | |||||||||||||||||||||||||    
T  25090086 ttaaaattaacactactaatcattttcttaataatcgtgta 25090046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 309
Target Start/End: Complemental strand, 44365358 - 44365326
Alignment:
Q  277 aatgatatttgtacatccatttgtgacaacttt 309  Q
    |||||||| ||||||||||||||||||||||||    
T  44365358 aatgatatatgtacatccatttgtgacaacttt 44365326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 46315891 - 46315843
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    |||||||||||| ||||||||| ||||  | ||||||||||||||||||    
T  46315891 aagttgtcacaagagttgtctcgaatggatgttcaaatatcaatactca 46315843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 46473262 - 46473310
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||| ||||||||| ||||||| || ||||||||||| |||||    
T  46473262 gaagttgtcataaaagttgtatcaaatggttgttcaaatatcattactc 46473310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 32884834 - 32884958
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| |||||||| ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  32884834 actaactacaattaataagagtgttttactaaatgctactaattctaccattgaaa-tcaacacaattaatcattttcttaataatcgtgcacaaacctt 32884932  T
Q  171 aaacgaataatatcatcagacggagg 196  Q
    |||||| ||||||  | |||||||||    
T  32884933 aaacgactaatattgtgagacggagg 32884958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 34360688 - 34360815
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||| || ||||||| |||| |||||||||  |||||||||||| |||||| ||    
T  34360688 actaactacaattaataagagtgttttagtaaatgctactaattttacca-ttgaaatcaatacaattaatcatttctttaataatcgtgcacaaacttt 34360786  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| ||||||  | ||||||||||||    
T  34360787 aaacgattaatattgtgagacggagggag 34360815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 40122942 - 40122831
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||| |||| ||||||||| ||| ||||||||| ||||||||||||| ||||| |||    
T  40122942 actaactacaatcaataagggtgttttagtaaatgctactaattttaacatt-aaaatcaacgcaattaatcatttccttaataatcgtgcacaaagctt 40122844  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  40122843 aaacgactaatat 40122831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 44536284 - 44536173
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||||||||||| ||||||||| ||||||||||||| | |||| ||    
T  44536284 actaactacaattaataagggtgttttaataaatcctgctaattttacca-ttaaaatcaacacaattaatcatttccttaataatcgtgcataaacttt 44536186  T
Q  171 aaacgaataatat 183  Q
    |||| | ||||||    
T  44536185 aaacaattaatat 44536173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 2066822 - 2066926
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||||||||||||||||||  |||||| ||||||||  ||||||||||||| ||||||||| ||||||||||||| | |||||||    
T  2066822 actaactaaaattaataagggtgttttaataaataatactaactttaccatc-aaaatcaacacaattaatcatttccttaataatcgtgcataaacctt 2066920  T
Q  171 aaacga 176  Q
    ||||||    
T  2066921 aaacga 2066926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 33790819 - 33790715
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||||||||||||  |||||  ||||||||||||||  ||||||||||||| ||||||||||||||||||||||| | |||||||    
T  33790819 actaactacaattaataagggtgttttagcaaatgaaactaattttaccatc-aaaatcaacacaattaatcattttcttaataatcgtgcataaacctt 33790721  T
Q  171 aaacga 176  Q
    ||||||    
T  33790720 aaacga 33790715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 38405190 - 38405086
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| |||||| || ||||||||||||||||| |||||| || ||||||||| ||||||||||||| |||||||||    
T  38405190 actaactacaattaataagggtattttagtaaatgatattaattttaccatttaaa-tcaacagaattaatcatttccttaataatcgtgcacaaacctt 38405092  T
Q  171 aaacga 176  Q
    ||||||    
T  38405091 aaacga 38405086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 42517726 - 42517626
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||||| ||||| |||||| |  ||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||    
T  42517726 actaactataattaataagggtattttagtaaatgatcttaattttaccattgaaa-tcaacacaattaatcattttcttaataatcgtgtacaaacatt 42517628  T
Q  171 aa 172  Q
    ||    
T  42517627 aa 42517626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 74 - 183
Target Start/End: Complemental strand, 47464450 - 47464342
Alignment:
Q  74 aactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    ||||| |||||||||| || ||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||| |||||||||||||  |||||||||||    
T  47464450 aactacaattaataagagttttttagtaaatgctactaattttaccattgaaa-tcaacacaattaatcatttccttaataatcgtgctcaaaccttaaa 47464352  T
Q  174 cgaataatat 183  Q
    ||| ||||||    
T  47464351 cgactaatat 47464342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 7061752 - 7061641
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| | | || || |||||| |||||||||||||||| ||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  7061752 actaactacaattaataaagatattatagtaaatgatactaattttaccattgaaa-tcaacacaattaatcatttccttaataatcgtgtacaaacctt 7061654  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  7061653 aaacgactaatat 7061641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 35380421 - 35380326
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    |||||||| ||||||||| | ||||||| ||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||| ||||    
T  35380421 actaactacaattaataatgatgttttagtaaatgctactaattttacca-ttaaaatcaacataattaatcattttcttaataatcgtgtataaac 35380326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 73 - 175
Target Start/End: Complemental strand, 46396969 - 46396868
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||||||| |||||||| ||||||||| ||||||||||||| ||| ||||||||| ||||||||| |||||| |||||| |||||||||||    
T  46396969 taactacaattaataagagtgttttagtaaatgctattaattttaccattgaaa-tcaacacaattaatcatttacttaatgatcgtgcacaaaccttaa 46396871  T
Q  173 acg 175  Q
    |||    
T  46396870 acg 46396868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 49428430 - 49428326
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| |||||  || ||||||||||||| ||| ||||||||||||||||||| ||||||||||||| | |||||||    
T  49428430 actaactacaattaataagggtattttagtaaattatattaattttaccattgaaa-tcaacacaaataatcatttccttaataatcgtgcaaaaacctt 49428332  T
Q  171 aaacga 176  Q
    ||||||    
T  49428331 aaacga 49428326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 6643748 - 6643637
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| | ||||||| ||||||||||||||||||||| || |||||||||||| ||||||||| |||||||||||||  ||||| ||    
T  6643748 actaactacaattaataaagatgttttagtaaatgctactaattttacca-ttgaaatcaacacaattaatcatttccttaataatcgtgctcaaacatt 6643650  T
Q  171 aaacgaataatat 183  Q
    |||| | ||||||    
T  6643649 aaactactaatat 6643637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 11907685 - 11907586
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||||||| ||||||||| ||||||||||||| |  ||||||||    
T  11907685 taactacaattaataagggtgttttagtaaatgatactaattttacca-tcaaaatcaacacaattaatcatttccttaataatcgtgcattaaccttaa 11907587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 17237384 - 17237257
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| ||||||| |||||| |||||||||||||| ||  ||||||||||| |||| ||||||||||||||| || |||||||||    
T  17237384 actaactacaattaataaggttgttttagtaaatgttactaattttacca-ttgcaatcaacacaattaattattttcttaataatcatgcacaaacctt 17237286  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    ||| || || |||  | ||||||||||||    
T  17237285 aaatgactagtattgtgagacggagggag 17237257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 53346792 - 53346903
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||||||||||| ||| | |||||||  ||| |||||||||||||||||| |||||  ||    
T  53346792 actaactaaaattaataagggtgttttagtaaatgctattaattttaccattgaaact-aacacaatcaattattttcttaataatcgtgcacaaatttt 53346890  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  53346891 aaacgactaatat 53346903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 17114473 - 17114577
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||||||| ||||||||| ||||||||  ||| |  ||||||    
T  17114473 actaactacaattaataagggtgttttagtaaatgatactaattttacca-tcaaaatcaacacaattaatcatttccttaataactgtgcatcaacctt 17114571  T
Q  171 aaacga 176  Q
    ||||||    
T  17114572 aaacga 17114577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 196
Target Start/End: Original strand, 43237276 - 43237400
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||| | | ||||| |||||  |||||||||||||||| ||| | ||||||| ||||||||| ||||||||||||| | |||||||    
T  43237276 actaactataattaataatgattttttagtaaatattactaattttaccattgaaa-taaacacaattaatcatttccttaataatcgtgcataaacctt 43237374  T
Q  171 aaacgaataatatcatcagacggagg 196  Q
    |||||| ||||||  | |||||||||    
T  43237375 aaacgactaatattgtgagacggagg 43237400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 51625136 - 51625220
Alignment:
Q  91 gtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||| |||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  51625136 gtgttttagtaaatgttactaattttaccattgaaa-tcaacacaattaatcattttcttaataatcgtgcacaaactttaaacga 51625220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 52859887 - 52859799
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| ||||||||||| ||||||| |||||| |||||||||||||| | ||||||||||||| ||||||||| |||||||||||||    
T  52859887 actaactacaattaataaggatgttttagtaaatgatactaattttacca-tcaaaatcaacacaattaatcatttccttaataatcgtg 52859799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 2942732 - 2942622
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| ||||||| |||||||||||||||||| |||  ||| ||||||||| |||||||||  ||||||||| | ||||||||||    
T  2942732 actaactacaattaataagg-tgttttagtaaatgctactaattttatcatcgaaa-tcaacacaattaatcatttctttaataatcttatacaaacctt 2942635  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  2942634 aaacgactaatat 2942622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 16821419 - 16821292
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||| | || || |||||| ||||||||||| |||| ||| ||||||||| ||||||||   |||||||||||| |||||||||    
T  16821419 actaactataattaataaggatattatagtaaatgatactaattttatcattgaaa-tcaacacaattaatcattgcattaataatcgtgcacaaacctt 16821321  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| |||| |  | ||||||||||||    
T  16821320 aaacgactaattttgtgagacggagggag 16821292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 35311311 - 35311184
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| ||||| || ||||||| | ||||||||||||| ||| | |||| || ||||||||| ||||||||||||| |||||||||    
T  35311311 actaactacaattaataagagtgttctagtaaatgcaattaattttaccattgaaatt-aacataattaatcatttccttaataatcgtgcacaaacctt 35311213  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||  ||||||  | ||||||||||||    
T  35311212 aaacgcttaatattgtaagacggagggag 35311184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 36985816 - 36985946
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    ||||||||||| |||||||| |||| ||||| |||||| |||||||||||||| || |||||||||||| ||||||||| || || |||||| || |||     
T  36985816 tctactaactacaattaatacgggtattttagtaaatgatactaattttacca-ttgaaatcaacacaattaatcatttcctgaaaaatcgtataaaaat 36985914  T
Q  168 cttaaacgaataatatcatcagacggagggag 199  Q
    ||||||||| || |||  | ||||||||||||    
T  36985915 cttaaacgagtattattttgagacggagggag 36985946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 3689595 - 3689699
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||||||||||||||||| |||||||| |||||| |||||||||||||| | |||||||| |||| |||||||||  ||||||| |||  | |||||||    
T  3689595 actaactataattaataagagtgttttagtaaatgatactaattttacca-tcaaaatcaatacaattaatcatttctttaataaccgtacataaacctt 3689693  T
Q  171 aaacga 176  Q
    ||||||    
T  3689694 aaacga 3689699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 5841515 - 5841411
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| |||||| || ||||||||||| ||||||||||| |||  |||||||| ||||||| | ||| |||||||||    
T  5841515 actaactacaattaataagggtattttagtaaatgatattaattttacca-ttaaaatcaacgcaatcaatcatttccttaatagttgtgcacaaacctt 5841417  T
Q  171 aaacga 176  Q
    ||||||    
T  5841416 aaacga 5841411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 47773107 - 47773003
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||||||| |||| |||| ||||||||  ||| |  ||||||    
T  47773107 actaactacaattaataagggtgttttagtaaatgatactaattttacca-tcaaaatcaacacaattaattatttccttaataactgtgcatcaacctt 47773009  T
Q  171 aaacga 176  Q
    ||||||    
T  47773008 aaacga 47773003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 52247516 - 52247412
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | ||||| |||||  || ||||||||||||| ||| | ||||||| ||||||||||||||||||||||| |||| ||||    
T  52247516 actaactacaattaataaggatattttagtaaattgtattaattttaccattgaaatt-aacacaattaatcattttcttaataatcgtgcacaatcctt 52247418  T
Q  171 aaacga 176  Q
    ||||||    
T  52247417 aaacga 52247412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 28500979 - 28500876
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||  ||||||||||||| ||||| |||||| || ||||||||||||| ||| |||||||||  |||||||| ||||||||||||| |||||| ||    
T  28500979 actaactgcaattaataagggtattttagtaaatgatattaattttaccattgaaa-tcaacacaatcaatcatttccttaataatcgtgcacaaacatt 28500881  T
Q  171 aaacg 175  Q
    |||||    
T  28500880 aaacg 28500876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 39157966 - 39157871
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgta 162  Q
    |||||||| |||||||||||||| || ||||| ||||||  || |||||||||||  ||| | ||||||| |||||||||||||||||||||||||    
T  39157966 ctctactagctataattaataagtgtattttagtaaatgaaacaaattttaccatcaaaattaaacacaactaatcattttcttaataatcgtgta 39157871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 29575143 - 29575252
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||| ||| || |||||||||||| || |||||||| |||||||| | |||| || |||||||||||||| ||||||||||||||  ||||    
T  29575143 taactacaattaacaagagtattttaataaatgttattaattttatcatttaaatt-aacataattaatcattttcttagtaatcgtgtacaaattttaa 29575241  T
Q  173 acgaataatat 183  Q
    |||| ||||||    
T  29575242 acgactaatat 29575252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 177
Target Start/End: Original strand, 6609803 - 6609899
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaa 177  Q
    ||||||||| | ||||||  |||||| |||||||||||||||  ||||||||||||| ||||||||| ||||||||||||| | |||| |||||||||    
T  6609803 aattaataaagatgtttttgtaaatgatactaattttaccatc-aaaatcaacacaattaatcatttccttaataatcgtgcataaactttaaacgaa 6609899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 32470034 - 32469958
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttctt 150  Q
    |||||| | ||||||||  |||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  32470034 taactacagttaataagaatgttttaataaatgatactaattttacca-ttaaaatcaacacaattaatcattttctt 32469958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 49176021 - 49175918
Alignment:
Q  72 ctaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctta 171  Q
    ||||||| ||||||||||| | ||||| |||||| ||||||||||| |||| ||| ||  ||||| ||||||||||||||| |||| || ||||||||||    
T  49176021 ctaactacaattaataaggttattttagtaaatgatactaattttatcattgaaa-tctccacaattaatcattttcttaaaaatcatgcacaaacctta 49175923  T
Q  172 aacga 176  Q
    |||||    
T  49175922 aacga 49175918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 22130076 - 22130191
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaa----taatcattttcttaataatcgtgtacaaa 166  Q
    |||||||| ||||||||||| ||||||  |||||| |||||||| ||||||| ||| |||||||| |    ||||||||| |||||||| |||| |||||    
T  22130076 actaactacaattaataaggatgtttttgtaaatgatactaattataccattgaaa-tcaacacatacaattaatcatttccttaataaccgtgcacaaa 22130174  T
Q  167 ccttaaacgaataatat 183  Q
    |||||||||| ||||||    
T  22130175 ccttaaacgactaatat 22130191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 174
Target Start/End: Original strand, 2653455 - 2653553
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||||||| || |||||||||||| ||||||||||| || || |||||||||||| |||||||||  ||||||||| || ||||| |||||    
T  2653455 taactacaattaataagagtattttaataaatgatactaatttta-caattgaaatcaacacaattaatcattt--ttaataatcatgcacaaatcttaa 2653551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 4972595 - 4972704
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||||||| |||||||| ||||||  || |||||| | ||| ||| ||||||||| |||||||||  |||||||||||| ||||| |||||    
T  4972595 taactacaattaataagagtgttttagtaaatgtcaccaatttttcaattgaaa-tcaacacaattaatcatttcattaataatcgtgcacaaatcttaa 4972693  T
Q  173 acgaataatat 183  Q
    |||| ||||||    
T  4972694 acgactaatat 4972704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 37547066 - 37547152
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||||| ||| ||||||||||||||  |||||||| ||||||| | ||||| ||||||||||||||| ||||||||||    
T  37547066 agaaatgatatttgtacaaccactttgtgacaacttt--ctcttatacttacattatattttt-ttctctctccattgtatttgaccaat 37547152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 38502568 - 38502487
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    ||||||||||||||||  || |||||||||||| |||||||||||||| | ||||||||||||| |||| |||| ||||||||    
T  38502568 taactataattaataaaagtattttaataaatgatactaattttacca-tcaaaatcaacacaattaattatttccttaataa 38502487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 21240792 - 21240708
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataat 156  Q
    |||||||| ||||||||||| ||| ||| |||||| |||||||||||||| | ||||||||||||  ||||||||| |||||||||    
T  21240792 actaactacaattaataaggatgtgttagtaaatgatactaattttacca-tcaaaatcaacacagttaatcatttccttaataat 21240708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 30682288 - 30682180
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    |||||||||||| || |||||||| | || || |||||| || ||||||||||| | ||||| ||||||| |||||||||| |||||| ||||| | |||    
T  30682288 ctctactaactacaactaataaggatattatagtaaatgatattaattttaccaat-aaaattaacacaattaatcatttttttaatagtcgtgcaaaaa 30682190  T
Q  167 ccttaaacga 176  Q
    ||||||||||    
T  30682189 ccttaaacga 30682180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 182
Target Start/End: Original strand, 52869107 - 52869215
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||| ||| |||||||||| | || |||| |||| ||| ||| ||||||||| |||| |||| ||||||||| ||| |||||||||||    
T  52869107 taactacaattaataaaggtattttaataaacgatattaatcttactattgaaa-tcaacacaattaattatttccttaataattgtgcacaaaccttaa 52869205  T
Q  173 acgaataata 182  Q
    |||| |||||    
T  52869206 acgactaata 52869215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 54506821 - 54506925
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||| |||| | | |||||||||||| || ||||||||||||| ||| ||||||||  |||||||||||||||||| |||  ||||| |||    
T  54506821 actaactacaattgataatgatattttaataaatgatattaattttaccattgaaa-tcaacacagttaatcattttcttaataaccgtaaacaaatctt 54506919  T
Q  171 aaacga 176  Q
    ||||||    
T  54506920 aaacga 54506925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 5618584 - 5618679
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||||| | |||||||||||  |  ||||||||||||| ||||||||||||| | |||||||| |||||||||| | |||||| ||||||||    
T  5618584 aattaataaggatattttaataaataattttaattttaccatt-aaaatcaacacaactcatcatttttttaataatcgagcacaaacattaaacga 5618679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 49746994 - 49747104
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||| | ||| ||||| ||||| |||||||||||| || || |||||||||||| |||| ||||| |||||||||||| |||| ||||    
T  49746994 actaactataattaatgaaggtattttagtaaatactactaattttatca-ttgaaatcaacacaattaattatttt-ttaataatcgtgcacaagcctt 49747091  T
Q  171 aaacgaataatat 183  Q
     || || ||||||    
T  49747092 gaatgactaatat 49747104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 30192234 - 30192340
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    |||||||||||| ||||||||||  | |||||  |||||  | ||||||||  | || |||||||||||| ||||||||||||||| |||||||||||||    
T  30192234 ctctactaactacaattaataagaatattttagcaaatgacattaatttta-taattgaaatcaacacaattaatcattttcttaaaaatcgtgtacaaa 30192332  T
Q  167 ccttaaac 174  Q
    | ||||||    
T  30192333 cattaaac 30192340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 7795026 - 7795115
Alignment:
Q  274 agaaatgatatttgtacatccatttgtg-acaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||||| |||||| || |||||||| | ||| ||| ||||||| | || || ||||||||||| ||||||||||||||    
T  7795026 agaaatgatatttgtacaaccatttttgtacaactttctttctcatacttacattatcttcttattctctctccaatgtttttgaccaat 7795115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 35998847 - 35998931
Alignment:
Q  74 aactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgt 159  Q
    ||||| ||||||||| | | |||||||||||| ||||||||||||  || |||||||||| ||||||| ||||| |||||||||||    
T  35998847 aactacaattaataatgatattttaataaatgttactaattttactgtt-aaaatcaacataaataataatttttttaataatcgt 35998931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 50263968 - 50263916
Alignment:
Q  124 aaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||||||   |||||||||||||||||||||| |||||||||||||||    
T  50263968 aaaatcaacacagtgaatcattttcttaataatcgtgcacaaaccttaaacga 50263916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 174
Target Start/End: Complemental strand, 8175660 - 8175566
Alignment:
Q  79 taattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaac 174  Q
    ||||||| ||| || |||||||||||| || ||||||||||| || |||||||||||| || ||||||| ||||||||| || |||| || |||||    
T  8175660 taattaacaagagtattttaataaatgatattaattttacca-ttgaaatcaacacaattattcatttttttaataatcatgcacaagccataaac 8175566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 11288695 - 11288614
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||| |||||| || ||||||| ||||| ||| |||| |||| ||||||||||||||||||||||  | |||||||||||||    
T  11288695 ttttagtaaatgatattaattttgccattgaaa-tcaatacaattaatcattttcttaataatcgtacataaaccttaaacga 11288614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 300 - 361
Target Start/End: Original strand, 24154667 - 24154728
Alignment:
Q  300 tgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaa 361  Q
    |||||||||| | ||| ||||| ||||  ||||||| |||||||||||||||||||||||||    
T  24154667 tgacaactttctttctcatattcacatgttgtttttattctctctccattgtttttgaccaa 24154728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 26147703 - 26147639
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaa 136  Q
    |||||||| ||||||||||  ||||||| |||||| |||||||||||||| | |||||||||||||    
T  26147703 actaactacaattaataagaatgttttagtaaatgatactaattttacca-tcaaaatcaacacaa 26147639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 38663536 - 38663479
Alignment:
Q  70 tactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaa 127  Q
    |||||||||  ||||||||  |||||||| ||||||||||||||||||||||| ||||    
T  38663536 tactaactacgattaataaaagtgttttagtaaatgctactaattttaccattgaaaa 38663479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 49579264 - 49579160
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||||||  |||||||| ||| |  || |||||||| |||| ||||||||||||| |||||||||  |||| |||| || |||||| ||||    
T  49579264 taactacaattaataaaagtgttttagtaa-taataataattttatcattaaaaatcaacacaattaatcatttatttaaaaatcatgcacaaactttaa 49579166  T
Q  173 acgaat 178  Q
    ||||||    
T  49579165 acgaat 49579160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 17367091 - 17367135
Alignment:
Q  275 gaaatgatatttgtacatccatttgtgacaactttatctcttata 319  Q
    |||||||||||||||||||  |||||||||||||| |||||||||    
T  17367091 gaaatgatatttgtacatcattttgtgacaactttctctcttata 17367135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 23915518 - 23915435
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||||||||||||||| | ||||||| |||||   ||  ||||||||||| ||||||||||| | ||||||||| ||||||||    
T  23915518 actaactataattaataatgatgttttagtaaattaaacatattttaccatt-aaaatcaacactactaatcatttccttaataa 23915435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 25233214 - 25233297
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||||||||||||||   |||||||| |||||| |||||||||||||| | ||||| ||||||| |||| ||||  |||||||    
T  25233214 actaactataattaatactagtgttttagtaaatgatactaattttacca-tcaaaattaacacaattaattatttctttaataa 25233297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 27880300 - 27880226
Alignment:
Q  100 taaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||| |||||||||||||||| ||| ||||||||| |||||||||  |||| |||| | ||||||||||||||||    
T  27880300 taaatgatactaattttaccattgaaa-tcaacacaa-taatcatttatttaaaaatcatatacaaaccttaaacga 27880226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 28480475 - 28480423
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaaaa 431  Q
    ||||||||||||| |||||||||||||  || ||||||||||| |||||||||    
T  28480475 gaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactcaaaa 28480423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 34321758 - 34321715
Alignment:
Q  112 attttaccatttaaaatcaacacaaataatcattttcttaataat 156  Q
    ||||||||||| ||||||||||||| |||||||||||||||||||    
T  34321758 attttaccatt-aaaatcaacacaattaatcattttcttaataat 34321715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 174
Target Start/End: Complemental strand, 41711521 - 41711442
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaac 174  Q
    |||||| ||||| || ||||||||||||| |||||||||| || ||||||||| | ||| ||| ||| |||||||||||||    
T  41711521 ttttaaaaaatgatattaattttaccatt-aaaatcaacataattaatcatttccataaaaattgtgcacaaaccttaaac 41711442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 46173675 - 46173719
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||    
T  46173675 ttgtcacaaaagttgtatcaaatggttattcaaatatcattactc 46173719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 25141949 - 25141898
Alignment:
Q  125 aaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||||||  ||||||||||||||| |||||| || |||||||||||||    
T  25141949 aaatcaacacatttaatcattttcttaaaaatcgtatataaaccttaaacga 25141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 427
Target Start/End: Original strand, 47998728 - 47998775
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||| ||||||||||||| |||||||||| ||||||||||| |||||    
T  47998728 aagttatcacaaaagttgtatcaaatgattgttcaaatatcactactc 47998775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 15596530 - 15596580
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaa 429  Q
    |||||||||||||||||||| | ||||| || ||||||||||| |||||||    
T  15596530 gaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactcaa 15596580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 309
Target Start/End: Original strand, 23347770 - 23347812
Alignment:
Q  268 tttataagaaatgatatttgtacatcca-tttgtgacaacttt 309  Q
    ||||| |||||||||||||||||||||| ||||||||||||||    
T  23347770 tttatgagaaatgatatttgtacatccactttgtgacaacttt 23347812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 42616968 - 42616887
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||| |||||| || ||||||||||||| ||| ||||||||  |||||||||  ||||||||| || ||||| |||||||||    
T  42616968 ttttagtaaatgatattaattttaccattgaaa-tcaacacagttaatcatttctttaataatcatgcacaaaacttaaacga 42616887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 421
Target Start/End: Original strand, 51389450 - 51389492
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatca 421  Q
    |||||||||||||||||||| ||||||| || |||||||||||    
T  51389450 gaagttgtcacaaaagttgtatcaaatggttgttcaaatatca 51389492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 54036588 - 54036546
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctct 315  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  54036588 agaaatgatatttgtacaaccattttgtgacaactttatctct 54036546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 428
Target Start/End: Complemental strand, 5234404 - 5234359
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    |||||||||||||||| ||||||| || ||||||||||| ||||||    
T  5234404 ttgtcacaaaagttgtatcaaatggttgttcaaatatcactactca 5234359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 6290521 - 6290558
Alignment:
Q  321 ttacattgtgtttttgttctctctccattgtttttgac 358  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  6290521 ttacattatgtttttattctctctccattgtttttgac 6290558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 17512424 - 17512352
Alignment:
Q  74 aactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcatttt 147  Q
    ||||| ||||||||| ||| ||||| |||||  || |||||||||| |||||||||||| ||| ||||||||||    
T  17512424 aactacaattaataatggtattttagtaaattatattaattttacc-tttaaaatcaactcaactaatcatttt 17512352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 28481349 - 28481300
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    ||||||||||||| |||||||||||||  || ||||||||||| ||||||    
T  28481349 gaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactca 28481300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 28482224 - 28482175
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    ||||||||||||| |||||||||||||  || ||||||||||| ||||||    
T  28482224 gaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactca 28482175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 32365726 - 32365673
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacat 326  Q
    |||||||||||||||||| ||| |||||||||||||| ||||| ||||| ||||    
T  32365726 agaaatgatatttgtacaaccattttgtgacaactttctctctcatattcacat 32365673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 38844426 - 38844377
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaa 429  Q
    ||||||||||||||||||||||| ||| || |||||||| || |||||||    
T  38844426 aagttgtcacaaaagttgtctcatatggttgttcaaataacattactcaa 38844377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 53412144 - 53412228
Alignment:
Q  74 aactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgt 159  Q
    |||||||||||||||   | ||||| |||||| |||||||||||||| || ||||||| | || ||||| ||||||||| ||||||    
T  53412144 aactataattaataaaaatattttagtaaatgatactaattttacca-ttgaaatcaataaaattaatcgttttcttaaaaatcgt 53412228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 1033282 - 1033330
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||||||| | ||||| || ||||||||||| |||||    
T  1033282 gaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactc 1033330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 6953458 - 6953422
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaacttt 309  Q
    |||||||||||||||||||||| ||||||||||||||    
T  6953458 agaaatgatatttgtacatccactttgtgacaacttt 6953422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 302 - 362
Target Start/End: Original strand, 11012182 - 11012242
Alignment:
Q  302 acaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||| ||| ||||||| | ||||| ||||||||| |||||||  |||||||    
T  11012182 acaactttatctctcatacttacattatatttttattctctctctattgtttcggaccaat 11012242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 16004263 - 16004215
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    |||||||||||| ||||||||||||||  | ||||||||||| ||||||    
T  16004263 aagttgtcacaagagttgtctcaaatggatgttcaaatatcactactca 16004215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 31275284 - 31275328
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||| ||||||| || ||||||||||| |||||    
T  31275284 ttgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 31275328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 42915156 - 42915108
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||||||| ||||||  || ||||||||||| |||||    
T  42915156 gaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactc 42915108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Original strand, 46566930 - 46566966
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaacttt 309  Q
    |||||||||||||||||||||| ||||||||||||||    
T  46566930 agaaatgatatttgtacatccactttgtgacaacttt 46566966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 49906144 - 49906184
Alignment:
Q  274 agaaatgatatttgtacatccatttgtgacaactttatctc 314  Q
    |||||||||||||||||| ||||||||||||| ||| ||||    
T  49906144 agaaatgatatttgtacaaccatttgtgacaattttctctc 49906184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 51717217 - 51717173
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||| ||||||||||| |||||| ||||||||||| |||||    
T  51717217 ttgtcacataagttgtctcatatgattgttcaaatatcactactc 51717173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 52392295 - 52392259
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaacttt 309  Q
    |||||||||||||||||||||| ||||||||||||||    
T  52392295 agaaatgatatttgtacatccactttgtgacaacttt 52392259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 380 - 428
Target Start/End: Complemental strand, 53583064 - 53583016
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    ||||||||||||||||||||||| ||| || |||||||| || ||||||    
T  53583064 aagttgtcacaaaagttgtctcatatggttgttcaaataacagtactca 53583016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 4e-33; HSPs: 80)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 28103773 - 28103900
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||  |||||||| |||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  28103773 actaactacaattaataagggtgttttggtaaatgctgctaattttaccattgaaa-tcaacacaattaatcattttcttaataatcgtgcacaaacctt 28103871  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    ||||||  |||||  | ||||||||||||    
T  28103872 aaacgacaaatattgtgagacggagggag 28103900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 5524420 - 5524524
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||||||||||||||||  |||||||| |||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||| ||    
T  5524420 actaactataattaataaaagtgttttattaaatgttactaattttaccattgaaa-tcaacacaattaatcattttcttaataatcgtgcacaaacttt 5524518  T
Q  171 aaacga 176  Q
    ||||||    
T  5524519 aaacga 5524524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 11373517 - 11373406
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| |  |||||||||||| ||| ||||| ||||||||||||| |||| ||||    
T  11373517 actaactacaattaataagggtgttttagtaaatgctactaattttacca-tcgaaatcaacacaattaaacatttccttaataatcgtgcacaatcctt 11373419  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  11373418 aaacgactaatat 11373406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 24516378 - 24516251
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | ||||| |||||| |||||||||||||||| ||| ||||||||| |||||||||| |||||||||||||| |||||||    
T  24516378 actaactacaattaataaggtttttttagtaaatgttactaattttaccattgaaa-tcaacacaattaatcattttattaataatcgtgtataaacctt 24516280  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| ||| || || |||| |||||||    
T  24516279 aaacgactaaaattatgagacagagggag 24516251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 21760071 - 21759969
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||| ||||||||||||| |||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||| || |||||||||||    
T  21760071 taactacaattagtaagggtgttttattaaatgatactaattttaccatc-aaaatcaacacaattaatcattttcttaataatcatgcacaaaccttaa 21759973  T
Q  173 acga 176  Q
    ||||    
T  21759972 acga 21759969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 172
Target Start/End: Complemental strand, 41506154 - 41506054
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||| | |||||||    
T  41506154 actaactacaattaataagagtgttttagtaaatgctactaattttacca-ttaaaattaacacaattaatcatttccttaataatcgtgcataaacctt 41506056  T
Q  171 aa 172  Q
    ||    
T  41506055 aa 41506054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 29835494 - 29835392
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaata 179  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||||| || ||||||||| |||||||| || | ||||||||||||||| ||    
T  29835494 aattaataagagtgttttagtaaatgctactaattttaccattt-aaatcaacataattaatcatttccttaataagcgcgcacaaaccttaaacgatta 29835396  T
Q  180 atat 183  Q
    ||||    
T  29835395 atat 29835392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 38391788 - 38391893
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||| ||| |||||||| |||||| |||||||||||||||  ||||||||||||| ||||||||||||||||||| ||| | |||||||    
T  38391788 actaactacaattaacaagagtgttttagtaaatgatactaattttaccatc-aaaatcaacacaattaatcattttcttaataattgtgcataaacctt 38391886  T
Q  171 aaacgaa 177  Q
    |||||||    
T  38391887 aaacgaa 38391893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 42935701 - 42935805
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||||| || ||||||||||| | ||||||||||||| |||||||||||||||||| |||| |  ||||||    
T  42935701 actaactacaattaataagggtgttttagtaaatgatattaattttacca-tcaaaatcaacacaattaatcattttcttaataaccgtgcatcaacctt 42935799  T
Q  171 aaacga 176  Q
    ||||||    
T  42935800 aaacga 42935805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 7463253 - 7463380
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||| ||||| ||| | |||||||||||||||||| |||| ||| ||||||||| ||||||||| |||||||| |||| |||| ||||    
T  7463253 actaactacaattaatgagggtatttaagtaaatgctactaattttatcattgaaa-tcaacacaattaatcatttccttaataaccgtgcacaatcctt 7463351  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| |||||| |  ||||||||||||    
T  7463352 aaacgactaatattacgagacggagggag 7463380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 175
Target Start/End: Complemental strand, 8592529 - 8592426
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||| |||||||||| |||| || |||||||||||| |||||||||  ||||||||| || |||||||||    
T  8592529 actaactacaattaataagggtgttttattaaatactactaatttaacca-ttgaaatcaacacaattaatcatttctttaataatcatgcacaaacctt 8592431  T
Q  171 aaacg 175  Q
    |||||    
T  8592430 aaacg 8592426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 27921028 - 27921111
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||||| |||||||||| ||||||||||||||| |||||||||||||| |||||||||||| || ||||||||||||||||||    
T  27921028 actaactacaattaataagagtgttttaataaatgatactaattttacca-ttaaaatcaacataattaatcattttcttaataa 27921111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 46478380 - 46478259
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||||||| ||||| ||||||||||||| ||||| ||| ||||| ||||||| |||||||||  ||||||||||||||  ||| ||||    
T  46478380 taactacaattaataagggtattttagtaaatgctactaactttactatt-aaaattaacacaattaatcatttaattaataatcgtgtatgaactttaa 46478282  T
Q  173 acgaataatatcatcagacggag 195  Q
    |||| |||||| || ||||||||    
T  46478281 acgactaatattatgagacggag 46478259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 2459511 - 2459620
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||||||||| || ||||||  |||||||||||| || ||| ||||||||| ||||||||| ||||||||||||| |||||| ||    
T  2459511 actaactacaattaataagggtgttgtagtaaatg--actaattttaccgttgaaa-tcaacacaattaatcatttccttaataatcgtgcacaaacatt 2459607  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  2459608 aaacgactaatat 2459620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 9786028 - 9786132
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| |||||||| ||||||  | ||||||||||||  ||||||||||||| ||||||||| ||||||||||||| ||| |||||    
T  9786028 actaactacaattaataagcgtgttttagtaaatgaaattaattttaccatc-aaaatcaacacaattaatcatttccttaataatcgtgcacagacctt 9786126  T
Q  171 aaacga 176  Q
    ||||||    
T  9786127 aaacga 9786132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 34947540 - 34947644
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||||||| |||||||||  ||||||| | || |||||||||    
T  34947540 actaactacaattaataagggtgttttagtaaatgataataattttacca-ttgaaatcaacacaattaatcatttctttaataaacatgcacaaacctt 34947638  T
Q  171 aaacga 176  Q
    ||||||    
T  34947639 aaacga 34947644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 83426 - 83529
Alignment:
Q  72 ctaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctta 171  Q
    ||||||| ||||||||||  ||||||| |||||| |||||||||||||||  ||||||||||||| ||||||||| ||||||||| ||| | ||||||||    
T  83426 ctaactacaattaataagaatgttttagtaaatgatactaattttaccatc-aaaatcaacacaattaatcatttccttaataattgtgcataaacctta 83524  T
Q  172 aacga 176  Q
    |||||    
T  83525 aacga 83529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 3178293 - 3178191
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| ||||||||| |||||| || ||||||||||||  |||||||||||||  |||||||| |||||||||| || |||||||||    
T  3178293 actaactacaattaataaaggtgttttagtaaatgatattaattttaccatc-aaaatcaacacaatcaatcatttacttaataatcatgcacaaacctt 3178195  T
Q  171 aaac 174  Q
    ||||    
T  3178194 aaac 3178191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 183
Target Start/End: Original strand, 22738738 - 22738852
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    ||||||||||| ||||||| ||| | ||||| |||||| |||||||||||||| || ||||| |||||| |||||||||  |||||||||||| | ||||    
T  22738738 tctactaactacaattaatgaggatattttagtaaatgatactaattttacca-ttgaaatctacacaattaatcatttctttaataatcgtgcataaac 22738836  T
Q  168 cttaaacgaataatat 183  Q
    ||||||||| ||||||    
T  22738837 cttaaacgactaatat 22738852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 12631345 - 12631446
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| |||||| |||||| ||||||||||||| | || ||||||| |||| |||| |||| ||||||||||||| |||||||||    
T  12631345 actaactacaattaataaggatgttttgataaatactactaattttacta-ttgaaatcaatacaattaattatttccttaataatcgtgcacaaacctt 12631443  T
Q  171 aaa 173  Q
    |||    
T  12631444 aaa 12631446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 21350714 - 21350606
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||| | |||| |||||||| || |||||||||||| ||   |||| ||||||||||||| |||||||||    
T  21350714 actaactacaattaataagggtgttttagtaaatacaactatttttacca-ttgaaatcaacacaatta---atttccttaataatcgtgcacaaacctt 21350619  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  21350618 aaacgactaatat 21350606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 34100634 - 34100525
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||| | | ||||| ||||||||||||||||||| ||| ||| ||||||||| ||||||||||||||||||||||  ||||| |||||    
T  34100634 taactacaattaataaagatattttagtaaatgctactaattttactattgaaa-tcaacacaattaatcattttcttaataatcgttgacaaatcttaa 34100536  T
Q  173 acgaataatat 183  Q
    || | ||||||    
T  34100535 acaactaatat 34100525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 44180268 - 44180349
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||| |||||  |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  44180268 ttttagtaaattatactaattttaccattgaaa-tcaacacaattaatcattttcttaataatcgtgtataaaccttaaacga 44180349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 759179 - 759079
Alignment:
Q  72 ctaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctta 171  Q
    ||||||| ||||||||||| ||||||| |||||| ||||| |||||||||  ||||||||||||| ||||||||| ||||||||| ||| | ||||||||    
T  759179 ctaactacaattaataaggatgttttagtaaatgatactagttttaccatc-aaaatcaacacaattaatcatttccttaataattgtgcataaacctta 759081  T
Q  172 aa 173  Q
    ||    
T  759080 aa 759079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 23670526 - 23670652
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||||||  ||||||||| |||||||| ||||||||| ||||||||||| |  |||||||||||| |||| |||  ||||||||| ||| |||||||||    
T  23670526 actaactaccattaataagagtgttttagtaaatgctattaattttacca-tggaaatcaacacaattaat-attcccttaataattgtgcacaaacctt 23670623  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| ||||||  | ||||||||||||    
T  23670624 aaacgattaatattgtgagacggagggag 23670652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 28202398 - 28202296
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| ||||||| ||||||  | ||||||||||||  ||||||||||||| |||| ||||||||||||| |||| | |||||||    
T  28202398 actaactacaattaataaggatgttttagtaaatgacattaattttaccatc-aaaatcaacacaattaattattttcttaataaccgtgcataaacctt 28202300  T
Q  171 aaac 174  Q
    ||||    
T  28202299 aaac 28202296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 16560659 - 16560558
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| ||||||| |||||| ||||| |||||||| | ||||| ||||||| ||||||||| ||||||||||||| | ||| |||    
T  16560659 actaactacaattaataaggatgttttagtaaatgatactagttttacca-tcaaaataaacacaattaatcatttccttaataatcgtgcataaatctt 16560561  T
Q  171 aaa 173  Q
    |||    
T  16560560 aaa 16560558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 16605003 - 16605104
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| ||||||| |||||| ||||| |||||||| | ||||| ||||||| ||||||||| ||||||||||||| | ||| |||    
T  16605003 actaactacaattaataaggatgttttagtaaatgatactagttttacca-tcaaaataaacacaattaatcatttccttaataatcgtgcataaatctt 16605101  T
Q  171 aaa 173  Q
    |||    
T  16605102 aaa 16605104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 26974066 - 26974173
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgct---actaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    |||||||| |||||||||| || ||||| |||||| |   | ||||||||||||| ||| ||||||||| ||||||||| ||||||||||||| ||||||    
T  26974066 actaactacaattaataagagtattttagtaaatgatgatattaattttaccattgaaa-tcaacacaattaatcatttccttaataatcgtgcacaaac 26974164  T
Q  168 cttaaacga 176  Q
    |||||||||    
T  26974165 cttaaacga 26974173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 173
Target Start/End: Complemental strand, 7457509 - 7457409
Alignment:
Q  72 ctaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctta 171  Q
    ||||||| | ||||||||||| ||||| ||||||  ||||||||||||||| ||| |||||| || |||||||||| |||||||||||| |||||| |||    
T  7457509 ctaactacatttaataagggtcttttagtaaatgtaactaattttaccattgaaa-tcaacataattaatcatttttttaataatcgtgcacaaacatta 7457411  T
Q  172 aa 173  Q
    ||    
T  7457410 aa 7457409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 21390335 - 21390439
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||| ||||||| ||||||| |||||| || || |||||||||  ||||| ||||||| ||||||||| ||||||||||||| | |||||||    
T  21390335 actaactacaatcaataaggatgttttagtaaatgatattagttttaccatc-aaaattaacacaattaatcatttccttaataatcgtgcataaacctt 21390433  T
Q  171 aaacga 176  Q
    ||||||    
T  21390434 aaacga 21390439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 30866007 - 30866110
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||| ||||||||||||| || ||||| |||||| || ||||| ||||||| ||| | ||||||| |||||||||  |||||||||||| |||||||||    
T  30866007 actaattataattaataagagtattttagtaaatgatattaattataccattgaaatt-aacacaattaatcatttctttaataatcgtgcacaaacctt 30866105  T
Q  171 aaacg 175  Q
    |||||    
T  30866106 aaacg 30866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 40076364 - 40076459
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||||  |||||||| |||||| |||||||||||||||  ||||| ||||||| |||||||||  |||||||||||| | |||||||||||||    
T  40076364 aattaataatagtgttttagtaaatgatactaattttaccatc-aaaattaacacaattaatcatttctttaataatcgtgcataaaccttaaacga 40076459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 80 - 159
Target Start/End: Original strand, 33819263 - 33819341
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgt 159  Q
    |||||||||| ||| |||  ||||||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||    
T  33819263 aattaataagagtgattttgtaaatgctactaattttacca-ttgaaatcaacacaattaatcatttccttaataatcgt 33819341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 2850970 - 2850866
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||| ||||| ||||| |||||  || |||||||| || || ||||||||| || ||||||||| |||||||||| || ||||||| |    
T  2850970 actaactataattaatgagggtattttagtaaataatattaattttatca-ttgaaatcaacataattaatcatttccttaataatcatgcacaaaccat 2850872  T
Q  171 aaacga 176  Q
    ||||||    
T  2850871 aaacga 2850866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 37856224 - 37856135
Alignment:
Q  274 agaaatgatatttgtacatccattt-gtgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||||| |||||| ||||||||||||||||  ||| | ||||| |  | || ||||||||||||||||||||||||||    
T  37856224 agaaatgatatttgtacaaccattttgtgacaactttatctcacatactcacattatactcttattctctctccattgtttttgaccaat 37856135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 43873963 - 43874067
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| | ||||||||||||||||| |||||| || ||||||||||| | ||||||||||||| |||||||||  ||||||| | || |  ||||||    
T  43873963 actaactacatttaataagggtgttttagtaaatgatattaattttacca-tcaaaatcaacacaattaatcatttctttaataaccatgcatcaacctt 43874061  T
Q  171 aaacga 176  Q
    ||||||    
T  43874062 aaacga 43874067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 10591286 - 10591338
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaaaa 431  Q
    |||||||||||||||||||||||||||| || ||||||||||| |||||||||    
T  10591286 gaagttgtcacaaaagttgtctcaaatggttgttcaaatatcactactcaaaa 10591338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 162
Target Start/End: Original strand, 7930093 - 7930183
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgta 162  Q
    |||||||||||||||||||||||||||| ||||||   |  ||||| ||| || |||||||||| | |||||||||||||||||| ||||||    
T  7930093 actaactataattaataagggtgttttagtaaatgaaccatatttttcca-ttgaaatcaacactactaatcattttcttaataaccgtgta 7930183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 37245739 - 37245834
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttctt---aataatcgtgtacaaaccttaaac 174  Q
    |||||||||| |||||||| ||||||||||||| ||||||| || ||||||||| || ||||| |||||||   |||||||||| |||||||||||||    
T  37245739 aattaataagagtgttttagtaaatgctactaa-tttacca-ttgaaatcaacagaattaatctttttcttataaataatcgtgcacaaaccttaaac 37245834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 13961999 - 13962100
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| | ||||||||| | ||||| ||| || || |||||||| |||| ||||||||||||| ||||||||| |||||||| |||| | |||||||    
T  13961999 actaactacacttaataaggatattttattaagtgatattaattttatcatt-aaaatcaacacaattaatcatttccttaataaacgtgcataaacctt 13962097  T
Q  171 aaa 173  Q
    |||    
T  13962098 aaa 13962100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 71 - 117
Target Start/End: Original strand, 42796048 - 42796094
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaatttta 117  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||    
T  42796048 actaactacaattaataagggtgttttaataaatgttactaatttta 42796094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 46211472 - 46211575
Alignment:
Q  75 actataattaataagggtgttttaataaatgcta---ctaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctta 171  Q
    |||| ||||||||||| ||||||| |||||| ||   ||| |||||||||  ||||||||||||| ||||||||| ||||||||| ||| | ||||||||    
T  46211472 actacaattaataaggatgttttagtaaatgatagtactagttttaccatc-aaaatcaacacaattaatcatttccttaataattgtgcataaacctta 46211570  T
Q  172 aacga 176  Q
    |||||    
T  46211571 aacga 46211575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 16904419 - 16904523
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||||||||||||||| | || |||||  || || || ||||||||| ||| ||| ||||||||| ||||||||||||||| |||  || |||||||||    
T  16904419 actaactataattaatacgagtattttagaaagtgataataattttactattgaaa-tcaacacaattaatcattttcttaaaaattttgcacaaacctt 16904517  T
Q  171 aaacga 176  Q
    ||||||    
T  16904518 aaacga 16904523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 19271822 - 19271718
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||  || ||||| | ||||| |||||||| | |||| ||| ||||||||| |||||||||| |||||||||||| |||| | ||    
T  19271822 actaactacaattaataaaagtattttagtcaatgccactaatttgatcattgaaa-tcaacacaattaatcatttttttaataatcgtgcacaagcatt 19271724  T
Q  171 aaacga 176  Q
    ||||||    
T  19271723 aaacga 19271718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 25887595 - 25887667
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||||||| |||||||||||||| ||||| ||| | ||| | ||||||| |||||||||    
T  25887595 agaaatgatatttgtacatccactttgtgacaactttctctctcatactcacaatatgtttttattctctctc 25887667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 139 - 199
Target Start/End: Original strand, 42796097 - 42796157
Alignment:
Q  139 aatcattttcttaataatcgtgtacaaaccttaaacgaataatatcatcagacggagggag 199  Q
    ||||||||| |||||||||||| |||| |||||||||| ||||||||| |||| |||||||    
T  42796097 aatcatttttttaataatcgtgcacaacccttaaacgactaatatcatgagactgagggag 42796157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 32346141 - 32346039
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||| ||||||||||||| || ||||| || ||| || ||||||||||| || ||||||||||||  ||| |||| |||||||| |||  |||||||||    
T  32346141 actaattataattaataagagtattttagtagatgatattaattttacca-ttgaaatcaacacaatcaattatttccttaataaccgtacacaaacctt 32346043  T
Q  171 aaac 174  Q
    ||||    
T  32346042 aaac 32346039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 3062339 - 3062389
Alignment:
Q  270 tataagaaatgatatttgtacatcca-tttgtgacaactttatctcttata 319  Q
    |||||||||||||||||| ||||||| |||||||||||||| |||||||||    
T  3062339 tataagaaatgatatttgaacatccattttgtgacaactttctctcttata 3062389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 31930586 - 31930482
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| |||||| ||||   | || |||||||||| ||||||||||||   ||||||||  |||||||||||| | |||| ||    
T  31930586 actaactacaattaataagggtattttaaaaaattagattagttttaccatt-aaaatcaacacagtcaatcatttctttaataatcgtgcataaacttt 31930488  T
Q  171 aaacga 176  Q
    ||||||    
T  31930487 aaacga 31930482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 2469704 - 2469776
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| ||| |||||||||||||| ||||| ||| | ||||||| || || |||||||||    
T  2469704 agaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattgtattcttattctctctc 2469776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 428
Target Start/End: Original strand, 12142019 - 12142067
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    ||||||||||||||||||| ||||||| || ||||||||||| ||||||    
T  12142019 aagttgtcacaaaagttgtatcaaatggttgttcaaatatcactactca 12142067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 25531072 - 25530989
Alignment:
Q  78 ataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgta 162  Q
    |||||||||||| |||||||| |||||| | |  ||||| ||||| ||||||||||| | |||||||||| ||| ||||||||||    
T  25531072 ataattaataagagtgttttagtaaatgatgcacattttgccatt-aaaatcaacactattaatcatttttttagtaatcgtgta 25530989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 159
Target Start/End: Complemental strand, 32019005 - 32018917
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgt 159  Q
    |||||| | |||||||||| || ||||| |||||| ||  |||||||| ||| ||||||||||||| |||||||||  |||| ||||||    
T  32019005 actaacaacaattaataagagtattttagtaaatgatagaaattttactattcaaaatcaacacaattaatcatttcattaaaaatcgt 32018917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 38218410 - 38218338
Alignment:
Q  274 agaaatgatatttgtacatccattt-gtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    ||||||||||||||||||  ||||| ||||||| ||||||||||||||||| ||| | ||||| || ||||||    
T  38218410 agaaatgatatttgtacaatcattttgtgacaattttatctcttatatttatattatatttttattttctctc 38218338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 39452393 - 39452487
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||||||| ||||| |||||| || ||||||||||| ||||||||||||  | |||| ||||| ||||  || |||| ||||||||||||||    
T  39452393 aattaataagggtattttagtaaatgatattaattttacca-ttaaaatcaaca-tattaattatttttttaaagattgtgtccaaaccttaaacga 39452487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 48608906 - 48609006
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||||||  |||||||||| ||||||| |||    ||||| |||||||||  ||||||||||||| ||||||||| |||||||||| || | ||||||     
T  48608906 actaactacgattaataaggatgttttagtaa----tactagttttaccatc-aaaatcaacacaattaatcatttccttaataatcatgcataaacctc 48609000  T
Q  171 aaacga 176  Q
    ||||||    
T  48609001 aaacga 48609006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 426
Target Start/End: Original strand, 7990207 - 7990254
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatact 426  Q
    ||||||||||||| ||||||||||||||| | ||||||||||| ||||    
T  7990207 gaagttgtcacaacagttgtctcaaatgaatgttcaaatatcactact 7990254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 8792536 - 8792489
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||||||||||| ||||||| || ||||||||||| |||||    
T  8792536 aagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactc 8792489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 34264595 - 34264666
Alignment:
Q  274 agaaatgatatttgtacatccattt-gtgacaactttatctcttatatttacattgtgtttttgttctctct 344  Q
    |||||||||||||||||  |||||| |||||||||||  |||||||| | ||||| ||||||| ||||||||    
T  34264595 agaaatgatatttgtacgaccattttgtgacaactttcgctcttatactcacattatgtttttattctctct 34264666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 37149560 - 37149525
Alignment:
Q  274 agaaatgatatttgtacatccatttgtgacaacttt 309  Q
    |||||||||||||||||| |||||||||||||||||    
T  37149560 agaaatgatatttgtacaaccatttgtgacaacttt 37149525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 39005458 - 39005513
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccattt 123  Q
    ||||||||||| ||||| ||| ||| ||||| |||||| |||||||||||||||||    
T  39005458 tctactaactacaattattaaaggtattttagtaaatgatactaattttaccattt 39005513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 173
Target Start/End: Original strand, 49101756 - 49101807
Alignment:
Q  122 ttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    ||||||| ||||||| ||||||||||||||| ||||||  ||||||||||||    
T  49101756 ttaaaataaacacaattaatcattttcttaaaaatcgtaaacaaaccttaaa 49101807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 26982908 - 26982962
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccatt 122  Q
    |||||||||||||||||||||  ||||||||||||||| |  |||||||| ||||    
T  26982908 tctactaactataattaataaatgtgttttaataaatgatgataattttatcatt 26982962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 355
Target Start/End: Complemental strand, 28862140 - 28862058
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctccattgttttt 355  Q
    |||||||||||||||||||||| ||| |||||||||| ||| | ||||| | ||| |  | || |||||||||||||||||||    
T  28862140 agaaatgatatttgtacatccattttatgacaactttctctttcatattcatattattatcttattctctctccattgttttt 28862058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 319
Target Start/End: Complemental strand, 31274599 - 31274553
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttata 319  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||    
T  31274599 agaaatgatatttgtacaaccaatttgtgacaactttttctcttata 31274553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 300 - 362
Target Start/End: Original strand, 33212081 - 33212143
Alignment:
Q  300 tgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||| ||| | ||||| | ||||| ||||||||| ||| ||||||||||||    
T  33212081 tgacaactttatctctcatactcacattatctttttattctctctctattatttttgaccaat 33212143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 44424214 - 44424279
Alignment:
Q  110 taattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||||||  ||||||||||||| ||||||||| |||||||| |||| |  ||||||||||||    
T  44424214 taattttaccatc-aaaatcaacacaattaatcatttccttaataaccgtgcatcaaccttaaacga 44424279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 315
Target Start/End: Original strand, 237026 - 237067
Alignment:
Q  275 gaaatgatatttgtaca-tccatttgtgacaactttatctct 315  Q
    ||||||||||||||||| || |||||||||||||||||||||    
T  237026 gaaatgatatttgtacaatcaatttgtgacaactttatctct 237067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 421
Target Start/End: Original strand, 15325661 - 15325702
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatca 421  Q
    ||||||||||||||||||||  |||||||| |||||||||||    
T  15325661 aagttgtcacaaaagttgtcaaaaatgattgttcaaatatca 15325702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 17828440 - 17828337
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||| ||||| ||  |||  |||||| || ||||||||||| || ||||||||| |||||||| ||| |||||| |||||| |||||| ||    
T  17828440 actaactacaattgataagagtaattttgtaaatgatattaattttacca-ttgaaatcaacaaaaataatcgtttccttaat-atcgtgcacaaacttt 17828343  T
Q  171 aaacga 176  Q
    ||||||    
T  17828342 aaacga 17828337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 428
Target Start/End: Original strand, 26153794 - 26153843
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    |||||||||||| ||||||||||| ||| || ||||||||||| ||||||    
T  26153794 gaagttgtcacataagttgtctcatatgtttgttcaaatatcactactca 26153843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 430
Target Start/End: Original strand, 2790311 - 2790363
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatga-ttattcaaatatcaatactcaaa 430  Q
    |||||||||||| ||||||||| |||||| || ||||||||||| ||||||||    
T  2790311 gaagttgtcacataagttgtctaaaatgagttgttcaaatatcactactcaaa 2790363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 27866596 - 27866524
Alignment:
Q  274 agaaatgatatttgtacatccatttgtg-acaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| |||||| || |||||||||||||| ||| | ||||| | || || |||||||||    
T  27866596 agaaatgatatttgtacaaccatttttgtacaactttatctctcatactcacattatcttcttattctctctc 27866524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 269 - 309
Target Start/End: Original strand, 31467607 - 31467647
Alignment:
Q  269 ttataagaaatgatatttgtacatccatttgtgacaacttt 309  Q
    ||||||||||||||||||||||||| | |||||| ||||||    
T  31467607 ttataagaaatgatatttgtacatcaacttgtgataacttt 31467647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 34992394 - 34992322
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| ||| ||| |||||||| | ||| | ||| ||||||| ||||||| |||||||||    
T  34992394 agaaatgatatttgtacaaccattttatgacaactctctctttcatacttacattatgtttttattctctctc 34992322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 37351923 - 37351879
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||| | |||||||||| ||||||||||| |||||    
T  37351923 ttgtcacaaaagttatatcaaatgattgttcaaatatcactactc 37351879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Original strand, 42663085 - 42663121
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaacttt 309  Q
    |||||||||||||||||||||| ||||||||||||||    
T  42663085 agaaatgatatttgtacatccattttgtgacaacttt 42663121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 43445545 - 43445589
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||| |||| |||||||||| ||||||||||| |||||    
T  43445545 ttgtcacaaaaattgtatcaaatgattgttcaaatatcactactc 43445589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 45431971 - 45432011
Alignment:
Q  280 gatatttgtacatcca-tttgtgacaactttatctcttata 319  Q
    |||||||||||| ||| ||||||||||||||||||||||||    
T  45431971 gatatttgtacaaccactttgtgacaactttatctcttata 45432011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 4e-33; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 23169078 - 23168967
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||| |||||| ||    
T  23169078 actaactataattaataaggatgttttagtaaatgctactaattttacca-ttgaaatcaacacaattaattattttcttaataatcgtgcacaaacttt 23168980  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  23168979 aaacgactaatat 23168967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 28749021 - 28749151
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    |||||||| || ||||||||||||||||||| ||||||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||| |||||     
T  28749021 tctactaattacaattaataagggtgttttagtaaatgctactaattttacca-ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaat 28749119  T
Q  168 cttaaacgaataatatcatcagacggagggag 199  Q
    |||||| ||  ||||| || ||||||||||||    
T  28749120 cttaaatgacaaatattatgagacggagggag 28749151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 9307660 - 9307771
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||| |||||||||||| ||||||||| |||||||| |||| ||| ||||||||  ||||||||| |||||||||||||||||||||||    
T  9307660 actaactacaattaacaagggtgttttagtaaatgctattaattttatcattgaaa-tcaacacagttaatcatttccttaataatcgtgtacaaacctt 9307758  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  9307759 aaacgactaatat 9307771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 24991738 - 24991611
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| |||||| || ||||| ||| |||||||||| || ||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  24991738 actaactacaattaataaaggtgttgtagtaaatactattaattttaccgttgaaa-tcaacacaattaatcatttccttaataatcgtgtacaaacctt 24991640  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| ||||||  | ||||||||||||    
T  24991639 aaacgactaatattgtgagacggagggag 24991611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 73 - 183
Target Start/End: Original strand, 12039117 - 12039226
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||||||| |||| ||| |||||| |||||||||||||||| ||| ||||||||| ||||||||| ||||||||||||| |||||||||||    
T  12039117 taactacaattaataagagtgtattagtaaatgttactaattttaccattgaaa-tcaacacaattaatcatttccttaataatcgtgcacaaaccttaa 12039215  T
Q  173 acgaataatat 183  Q
    |||| ||||||    
T  12039216 acgactaatat 12039226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 26093427 - 26093531
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | |||||||||||| || ||||||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||| |||    
T  26093427 actaactacaattaataaggatattttaataaatgatattaattttaccattgaaa-tcaacacaattaatcattttcttaataatcgtgcacaaatctt 26093525  T
Q  171 aaacga 176  Q
    ||||||    
T  26093526 aaacga 26093531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 39864144 - 39864248
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| || ||||| ||||||||||||||||||||| || |||||||||||| ||||||||| ||||||||||||| |||||| ||    
T  39864144 actaactacaattaataagagtattttagtaaatgctactaattttacca-ttgaaatcaacacaattaatcatttccttaataatcgtgcacaaacttt 39864242  T
Q  171 aaacga 176  Q
    ||||||    
T  39864243 aaacga 39864248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 917054 - 917161
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    ||||||||||| ||||||||||||| ||||| |||||| || |||||||||||||| ||||||||| || |||||||||  |||||||||||| ||||||    
T  917054 tctactaactacaattaataagggtattttagtaaatgatattaattttaccattt-aaatcaacataattaatcatttatttaataatcgtgcacaaac 917152  T
Q  168 cttaaacga 176  Q
    |||||||||    
T  917153 cttaaacga 917161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 49224071 - 49223983
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||||||| |||||||||||||| ||| ||||    
T  49224071 actaactacaattaataagggtgttttagtaaatgatactaattttacca-tcaaaatcaacacaattaatcattttcttagtaaccgtg 49223983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 31042830 - 31042957
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||| ||| ||||||||||||| ||  | |||||| |||||||||||||||| ||| ||||||||| ||||||||| |||||||||| || |||||||||    
T  31042830 actacctacaattaataagggtattacagtaaatgatactaattttaccattgaaa-tcaacacaattaatcatttccttaataatcatgcacaaacctt 31042928  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    ||| || ||||||  | ||||||||||||    
T  31042929 aaatgactaatattgtgagacggagggag 31042957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 40144930 - 40144849
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||| ||||||||||||||||||| |||||| || ||||||||||| | ||||||||||||| ||||||||||||||||||    
T  40144930 taactacaattaataagggtgttttagtaaatgatattaattttacca-tcaaaatcaacacaattaatcattttcttaataa 40144849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 16395131 - 16395028
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||| |||| | ||||| |||||| |||||||||||| ||  ||||||||||||| ||||||||||||||||||||||| | |||||||    
T  16395131 actaactacaattaaaaagg-tattttagtaaatgatactaattttactatc-aaaatcaacacaattaatcattttcttaataatcgtgcataaacctt 16395034  T
Q  171 aaacga 176  Q
    ||||||    
T  16395033 aaacga 16395028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 33733351 - 33733244
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    |||||||||||| |||||||||  || ||||| |||||| || ||||||||||||| ||| ||||||||| ||||||||| ||||||||||||| |||||    
T  33733351 ctctactaactacaattaataaaagtattttagtaaatgttaataattttaccattgaaa-tcaacacaa-taatcatttccttaataatcgtgcacaaa 33733254  T
Q  167 ccttaaacga 176  Q
    | ||||||||    
T  33733253 ctttaaacga 33733244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 37276494 - 37276582
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| ||||||||||||||||||| |||| | |||||||||||||| | ||||||||||||  ||||||||| |||||||||||||    
T  37276494 actaactacaattaataagggtgttttagtaaacgatactaattttacca-tcaaaatcaacacagttaatcatttccttaataatcgtg 37276582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 38787374 - 38787478
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||| ||||||   ||||| ||||| |||||||||  |||||||||||||  |||||||| ||||||||||||| | |||||||    
T  38787374 actaactataattaataaggatgttttggcaaatgatactagttttaccatc-aaaatcaacacaatcaatcatttccttaataatcgtgcataaacctt 38787472  T
Q  171 aaacga 176  Q
    ||||||    
T  38787473 aaacga 38787478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 34031612 - 34031510
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| ||| ||||| |||||| || |||||||||||||  || ||||||||| ||||||||| |||||||||| || |||||||||    
T  34031612 actaactacaattaataacggtattttagtaaatgatattaattttaccattggaa-tcaacacaagtaatcatttccttaataatcatgcacaaacctt 34031514  T
Q  171 aaac 174  Q
    ||||    
T  34031513 aaac 34031510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 42410027 - 42410129
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||||||| |||| |||||| || ||||||||||| | ||||||||||||| |||||||||| ||||||| |||| |  ||||||    
T  42410027 actaactacaattaataagggtgctttagtaaatgatattaattttacca-tcaaaatcaacacaattaatcatttttttaataaccgtgcatcaacctt 42410125  T
Q  171 aaac 174  Q
    ||||    
T  42410126 aaac 42410129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 15699155 - 15699260
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatca-ttttcttaataatcgtgtacaaacct 169  Q
    |||||||| ||||||||||||||||||| |||||| || ||||||||||| | ||||||||||||| |||||| ||||||||||||  ||| |  |||||    
T  15699155 actaactacaattaataagggtgttttagtaaatgatattaattttacca-tcaaaatcaacacaattaatcatttttcttaataactgtgcatcaacct 15699253  T
Q  170 taaacga 176  Q
    |||||||    
T  15699254 taaacga 15699260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 32970653 - 32970545
Alignment:
Q  70 tactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacct 169  Q
    ||||||| | |||||||| | || ||||| |||||  || |||||||| |||| ||| ||||||||| |||||||||||||||||||||| ||| |||||    
T  32970653 tactaacaacaattaatacgagtattttagtaaataatattaattttatcattgaaa-tcaacacaattaatcattttcttaataatcgtatacgaacct 32970555  T
Q  170 taaacgaata 179  Q
    ||||||||||    
T  32970554 taaacgaata 32970545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 20209925 - 20209842
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||||| ||||||||||| ||||||| |||||| |||||||||||| | | |||||||||| || ||||||||||||||||||    
T  20209925 actaactacaattaataaggatgttttagtaaatgatactaattttacta-tcaaaatcaacataattaatcattttcttaataa 20209842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 31978735 - 31978633
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||||||||||||||  |  |||| ||| || || ||||||||||||| ||| ||||||||| ||||| ||||||||||||||||| |||||| ||||    
T  31978735 taactataattaataagaatagtttagtaagtgatattaattttaccattgaaa-tcaacacaattaatctttttcttaataatcgtgcacaaactttaa 31978637  T
Q  173 acga 176  Q
    ||||    
T  31978636 acga 31978633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 45331376 - 45331462
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||| ||||||||||||||||||| |||||| || ||||||||||| | |||||||||| || |||| ||||||||||||| ||||    
T  45331376 taactacaattaataagggtgttttagtaaatgatattaattttacca-tcaaaatcaacataattaattattttcttaataaccgtg 45331462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 6023732 - 6023623
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||| ||| ||||| |||| |||||||| ||||||||| ||| ||||||||| ||| ||||| | ||||||||| | |||||| ||||    
T  6023732 taactacaattaataaaggtattttagtaaaagctactaaatttaccattgaaa-tcaacacaattaaacatttccgtaataatcgcgcacaaacattaa 6023634  T
Q  173 acgaataatat 183  Q
    |||| ||||||    
T  6023633 acgactaatat 6023623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 74 - 176
Target Start/End: Complemental strand, 21910087 - 21909987
Alignment:
Q  74 aactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    ||||||| ||||||||| |||||||  ||| | |||||||||||||||  ||||||||||||| ||||||||| ||||||||| ||| | ||||||||||    
T  21910087 aactatagttaataagg-tgttttagcaaacgatactaattttaccatc-aaaatcaacacaattaatcatttccttaataattgtgcataaaccttaaa 21909990  T
Q  174 cga 176  Q
    |||    
T  21909989 cga 21909987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 30755026 - 30754922
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||| | | ||||| |||||  ||  ||||||||| || ||||||||||||| ||||||||| ||||||||||||| | ||| |||    
T  30755026 actaactataattaataatgatattttagtaaataatataaattttaccctt-aaaatcaacacaattaatcatttccttaataatcgtgcataaatctt 30754928  T
Q  171 aaacga 176  Q
    ||||||    
T  30754927 aaacga 30754922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 32826076 - 32825973
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||| || ||||||||| ||||||||| |||||| |||||||||||||| | ||||||||||| | ||||||||| |||||||| |||| |  ||||||    
T  32826076 actaattacaattaataaaggtgttttagtaaatgatactaattttacca-tcaaaatcaacac-attaatcatttccttaataaccgtgcatcaacctt 32825979  T
Q  171 aaacga 176  Q
    ||||||    
T  32825978 aaacga 32825973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 29074926 - 29074997
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||||| || |||||||||||||| || ||||||||||| ||||||||||||||| |||||||||| ||||    
T  29074926 aattaatatggatgttttaataaatgatattaattttacca-ttaaaatcaacacaactaatcatttttttaa 29074997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 44707845 - 44707718
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||  |||||||| ||||| |||||||||||| || || ||||||| | || |||||||||   ||||||||||| | |||| ||    
T  44707845 actaactacaattaataaatgtgttttagtaaatactactaattttatca-ttgaaatcaatataattaatcatttctataataatcgtgcaaaaacttt 44707747  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| |||||| || ||||| ||||||    
T  44707746 aaacgactaatattatgagacgaagggag 44707718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 5179431 - 5179380
Alignment:
Q  125 aaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  5179431 aaatcaacacaattaatcattttgttaagaatcgtgtacaaaccttaaacga 5179380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 73 - 159
Target Start/End: Complemental strand, 6160542 - 6160457
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgt 159  Q
    |||||| |||||||||| || ||||| |||||  ||||||||||| |||| ||| ||||||||| ||||||||||||||| ||||||    
T  6160542 taactacaattaataagagtattttagtaaataatactaattttatcattgaaa-tcaacacaattaatcattttcttaaaaatcgt 6160457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 35367694 - 35367625
Alignment:
Q  107 tactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac-cttaaacga 176  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||||||||||| | |||| |||||||||    
T  35367694 tactaattttaccatc-aaaatcaacacaattaatcattttcttaataatcgtgcataaacgcttaaacga 35367625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 7759248 - 7759336
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| |||||||||| || ||||| |||||| || |||||| |||||| ||| ||||||||| |||| ||||| ||||||||||||    
T  7759248 actaactacaattaataagagtattttagtaaatgatattaatttcaccattgaaa-tcaacacaattaattatttttttaataatcgtg 7759336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 36701954 - 36702034
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||||| ||||||||||||  ||||| |||||| |||||||||||||| || ||||||||| || ||||||||| |||||    
T  36701954 actaactacaattaataagggcattttagtaaatgatactaattttacca-ttgaaatcaacataattaatcatttccttaa 36702034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 152
Target Start/End: Original strand, 36718058 - 36718138
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||||| ||||||||||||  ||||| |||||| |||||||||||||| || ||||||||| || ||||||||| |||||    
T  36718058 actaactacaattaataagggcattttagtaaatgatactaattttacca-ttgaaatcaacataattaatcatttccttaa 36718138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 155
Target Start/End: Complemental strand, 4441688 - 4441605
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||||| |||||| |||||||||||| ||||  | | ||||||||||| ||||||||| ||||| |||| |||||||||||||    
T  4441688 actaactacaattaacaagggtgttttagtaaagacgattaattttacca-ttaaaatcaccacaattaattattttcttaataa 4441605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 27687578 - 27687506
Alignment:
Q  274 agaaatgatatttgtacatccattt-gtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||| | ||||| | ||||| |||||||||    
T  27687578 agaaatgatatttgtacaaccattttgtgacaactttatctctcatactcacattatatttttattctctctc 27687506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 92 - 176
Target Start/End: Complemental strand, 43500848 - 43500765
Alignment:
Q  92 tgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||| ||||||  ||||||| ||||||  ||||||||||||| |||| |||| ||||||||||||| | |||||||||||||    
T  43500848 tgttttagtaaatgaaactaattataccatc-aaaatcaacacaattaataatttccttaataatcgtgcataaaccttaaacga 43500765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 27687313 - 27687375
Alignment:
Q  110 taattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    ||||||||||||| ||| ||||||||| |||||||||| |||||||| ||| ||||||||||||    
T  27687313 taattttaccattgaaa-tcaacacaactaatcatttttttaataattgtgcacaaaccttaaa 27687375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 41121910 - 41121836
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattt 146  Q
    |||||||| ||||||||||||| ||||| |||||  | |||||||||||| | ||||||||||||| |||||||||    
T  41121910 actaactacaattaataagggtattttagtaaattatgctaattttacca-tcaaaatcaacacaattaatcattt 41121836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 89 - 176
Target Start/End: Original strand, 43614448 - 43614534
Alignment:
Q  89 gggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||| ||||| | |||| |||||||||||||||| ||||||||||||  ||||||||| ||||| |  ||||||||| ||||||||||    
T  43614448 gggtattttagtcaatgatactaattttaccatt-aaaatcaacacacttaatcatttccttaaaacccgtgtacaatccttaaacga 43614534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 37506157 - 37506264
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgcta---ctaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    |||||||| |||||||||  |||||||| |||||| ||   ||||||||| |||  ||||||||||||| ||||||||| |||||||| |||| |  |||    
T  37506157 actaactacaattaataaaagtgttttagtaaatgatagtactaattttatcatc-aaaatcaacacaattaatcatttccttaataaccgtgcatcaac 37506255  T
Q  168 cttaaacga 176  Q
    |||||||||    
T  37506256 cttaaacga 37506264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 40610363 - 40610413
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaa 429  Q
    ||||||||||||||||||||||||||||  | ||||||||||| |||||||    
T  40610363 gaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactcaa 40610413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 31480178 - 31480089
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    ||||||||||| |||||||||| ||||||| |||||| ||||| ||| | |||||||  | || |||||| |||||||||||| ||||||    
T  31480178 agaaatgatatatgtacatccactttgtgataactttctctctcatactcacattgtcctcttattctctttccattgtttttaaccaat 31480089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 11449955 - 11450018
Alignment:
Q  110 taattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaac 174  Q
    ||||||||||||| ||| |||||| || ||| ||||| ||||||||||||| |||||||||||||    
T  11449955 taattttaccattgaaa-tcaacataattaaccatttccttaataatcgtgcacaaaccttaaac 11450018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 15466759 - 15466831
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||||||| ||||| |||||||||||||  ||||| ||||| |  |||| |||||||||    
T  15466759 agaaatgatatttgtacatccactttgtaacaactttatctcacatattcacattatacttttattctctctc 15466831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 32219743 - 32219695
Alignment:
Q  74 aactataattaataagggtgttttaataaatgctactaattttaccatt 122  Q
    |||||||||||||||| || |||||||||||| || |||||||||||||    
T  32219743 aactataattaataagagtattttaataaatgatattaattttaccatt 32219695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 10495891 - 10495973
Alignment:
Q  91 gtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaac 174  Q
    |||||||| |||||| |||||||||||||| | |||||||||| || |||| ||||| ||||||||| |  | |||||||||||    
T  10495891 gtgttttagtaaatgatactaattttacca-tcaaaatcaacaaaattaataatttttttaataatcttacataaaccttaaac 10495973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 22181371 - 22181457
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||| ||| | ||||||||||||| |||||| || ||||||||||| || |||| ||| ||| ||||||||| |||||||| ||||    
T  22181371 taactacaataactaagggtgttttagtaaatgatattaattttacca-ttgaaatgaactcaactaatcatttccttaataaccgtg 22181457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 48256921 - 48256991
Alignment:
Q  274 agaaatgatatttgtacatccatttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| |||||||| |||||||| ||||| ||||| ||||| | || || |||||||||    
T  48256921 agaaatgatatttgtacaaccatttgt-acaactttctctctcatattcacattatcttcttattctctctc 48256991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 176
Target Start/End: Complemental strand, 51028576 - 51028474
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||||||   | ||||||||||||||||||| ||||  ||| ||||||||||||| ||||| ||| ||| | |||||| | |||| |||||    
T  51028576 taactacaattaataaaaatattttaataaatgctactaactttattatt-aaaatcaacacaattaatcgtttccttgaaaatcgtatgcaaatcttaa 51028478  T
Q  173 acga 176  Q
    ||||    
T  51028477 acga 51028474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 6267891 - 6267837
Alignment:
Q  122 ttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||||||||| |||||||||  |||| ||| ||| |||||||||||||||    
T  6267891 ttaaaatcaacacaattaatcatttctttaaaaatagtgcacaaaccttaaacga 6267837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 13579706 - 13579605
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||| |||||||||  |||||| || |||| ||  |||  ||||||||||||| |||||||||  ||||||||| || | |||||||    
T  13579706 actaactacaattaatatgggtgtttttgtaaatgatattaatattgtcatc-aaaatcaacacaattaatcatttctttaataatcatgcataaacctt 13579608  T
Q  171 aaa 173  Q
    |||    
T  13579607 aaa 13579605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 14757679 - 14757633
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaatttta 117  Q
    |||||||| |||||||||| |||||||| |||||| |||||||||||    
T  14757679 actaactacaattaataagagtgttttagtaaatgttactaatttta 14757633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 71 - 157
Target Start/End: Complemental strand, 44761616 - 44761531
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatc 157  Q
    |||||||||||||||||| | | ||||| |||||| || |||||||| || ||||||| |||| || |||||||||| ||| |||||    
T  44761616 actaactataattaataaagatattttagtaaatgatattaattttatca-ttaaaattaacataattaatcatttttttattaatc 44761531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 277 - 362
Target Start/End: Complemental strand, 47187723 - 47187637
Alignment:
Q  277 aatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||  || |||| ||||||||| | ||| ||  ||| ||| ||||||| ||||||||||||| ||||||||||||    
T  47187723 aatgatatttgtacaatcactttgggacaactttctgtctcatgcttatattatgtttttattctctctccattatttttgaccaat 47187637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 176
Target Start/End: Original strand, 2572525 - 2572605
Alignment:
Q  95 tttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||| |||||| || ||||||||||||| ||| |||| |||| |||||||| | |||||||||||  |||||| ||||||||    
T  2572525 tttagtaaatgatattaattttaccattgaaa-tcaatacaattaatcattattttaataatcgtacacaaactttaaacga 2572605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 327
Target Start/End: Original strand, 4637942 - 4637991
Alignment:
Q  279 tgatatttgtacatccattt-gtgacaactttatctcttatatttacatt 327  Q
    ||||||||||||| |||||| || |||||||| |||||||||||||||||    
T  4637942 tgatatttgtacaaccattttgtaacaactttctctcttatatttacatt 4637991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 8896417 - 8896337
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||||| |||||||||   | ||||| |||||| || ||||||||||||| ||| |||||||||  ||||||||||||||    
T  8896417 actaactacaattaataaatatattttagtaaatgatattaattttaccattgaaa-tcaacacaatcaatcattttcttaa 8896337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 427
Target Start/End: Original strand, 28716284 - 28716325
Alignment:
Q  386 tcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||||||||||||| || ||||||||||| |||||    
T  28716284 tcacaaaagttgtctcaaatggttgttcaaatatcactactc 28716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 36690508 - 36690459
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaa 429  Q
    ||||||||||||||||||||||| ||| || |||||||| || |||||||    
T  36690508 aagttgtcacaaaagttgtctcatatggttgttcaaataacactactcaa 36690459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 429
Target Start/End: Complemental strand, 36706609 - 36706560
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaa 429  Q
    ||||||||||||||||||||||| ||| || |||||||| || |||||||    
T  36706609 aagttgtcacaaaagttgtctcatatggttgttcaaataacactactcaa 36706560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 11097954 - 11097918
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaacttt 309  Q
    |||||||||||||||||||||| ||||||||||||||    
T  11097954 agaaatgatatttgtacatccattttgtgacaacttt 11097918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 14983785 - 14983868
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgttttt--gttctctctccattgtttt 354  Q
    |||||||||||||||||| ||| ||| | |||||||| ||||| ||||| ||||| |||||||   ||||||||| ||||||||    
T  14983785 agaaatgatatttgtacaaccactttttaacaactttctctctcatattcacattatgtttttactttctctctctattgtttt 14983868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 309
Target Start/End: Complemental strand, 20288410 - 20288374
Alignment:
Q  274 agaaatgatatttgtacatcc-atttgtgacaacttt 309  Q
    ||||||||||||||||||||| |||||||||||||||    
T  20288410 agaaatgatatttgtacatccaatttgtgacaacttt 20288374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 24880909 - 24881008
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||  || ||||| |||||| || ||||||||||| || ||||||||| ||  |||||||| | |||||||  || |||||||||    
T  24880909 actaactacaattaataaaagtattttagtaaatgatattaattttacca-ttgaaatcaacataatcaatcatttccgtaataattatgcacaaacctt 24881007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 27896988 - 27897083
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    |||||||||||||||||||  | |||| ||||||  ||||||||||| || |||||||||||||   |||| |||| ||||| |||| || ||||||    
T  27896988 actaactataattaataagaatattttgataaattatactaattttatca-ttaaaatcaacacgtttaattatttccttaaaaatcatgcacaaac 27897083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 107
Target Start/End: Original strand, 35367835 - 35367871
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgct 107  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  35367835 actaactacaattaataagggtgttttagtaaatgct 35367871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 40139127 - 40139199
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| ||| ||| |||||||||| ||||| ||| | ||||| | ||||| |||||||||    
T  40139127 agaaatgatatttgtacaaccattttatgacaactttctctctcatactcacattatatttttattctctctc 40139199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 42539419 - 42539491
Alignment:
Q  274 agaaatgatatttgtacatccatt-tgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| ||||| |||||||||||| ||||| | | | ||||| |||||||| | ||||||    
T  42539419 agaaatgatatttgtacaaccattatgtgacaactttctctctcagactcacattatgtttttgctttctctc 42539491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 44122248 - 44122322
Alignment:
Q  73 taactataattaataagggtgttttaataa--atgctactaattttaccatttaaaatcaacacaaataatcattt 146  Q
    |||||||||||||||||||||||||| |||  ||| |||  ||||| ||| ||||||||||||| | |||||||||    
T  44122248 taactataattaataagggtgttttagtaaatatgatacatatttttcca-ttaaaatcaacactattaatcattt 44122322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 46903482 - 46903554
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| ||| ||||  |||||||| ||||| ||| | ||||| ||||||| |||||||||    
T  46903482 agaaatgatatttgtacaaccattttgatacaactttctctctcatactcacattatgtttttattctctctc 46903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 46948113 - 46948161
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||||| ||||||||||||||  | ||||||||||| |||||    
T  46948113 gaagttgtcacaagagttgtctcaaatggatgttcaaatatcactactc 46948161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 47059949 - 47059877
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| ||| ||| | ||||||||||||| |||||| ||||| | || || |||||||||    
T  47059949 agaaatgatatttgtacaaccattttttaacaactttatctcatatattcacattatattcttattctctctc 47059877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 49453492 - 49453564
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| ||| |||||||||||||| ||||| ||| | ||||| |  |||| |||||||||    
T  49453492 agaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattatacttttattctctctc 49453564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 1781835 - 1781939
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| || | ||||||| || ||||||||||||||| ||||||| | |||||||    
T  1781835 actaactacaattaataagggtgttttagtaaatgctactaattttacca-ttgagatcaacataattaatcattttcttaacaatcgtgcataaacctt 1781933  T
Q  171 aaacga 176  Q
    ||||||    
T  1781934 aaacga 1781939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 11656027 - 11655923
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||  ||||||||||||||  ||||||||||||| |||||||||||||||||| |||| | |||||||    
T  11656027 actaactacaattaataagggtgttttagtaaatgacactaattttaccatc-aaaatcaacacaattaatcattttcttaataaccgtgcataaacctt 11655929  T
Q  171 aaacga 176  Q
    ||||||    
T  11655928 aaacga 11655923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 15058150 - 15058261
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| ||||||| ||||||||||||||| ||| | |||  || ||||||||||||||||||||||| |||||||||    
T  15058150 actaactacaattaataagggtattttagtaaatgccactaattttaccattgaaatt-aacttaattaatcattttcttaataatcgtgcacaaacctt 15058248  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  15058249 aaacgactaatat 15058261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 199
Target Start/End: Original strand, 23142700 - 23142827
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||| ||| ||||||||||||||||||| ||||||| |||| |||||||||| ||| ||||||||| ||||||||||||||||||||||| | |||||||    
T  23142700 actacctacaattaataagggtgttttagtaaatgccactatttttaccattgaaa-tcaacacaattaatcattttcttaataatcgtggataaacctt 23142798  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||  | ||||||  | ||||||||||||    
T  23142799 aaataactaatattgtgagacggagggag 23142827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 31894291 - 31894164
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| |  |||||| ||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||| |  ||||| |||    
T  31894291 actaactacaattaataatgacgttttagtaaatgctactaattttaccattgaaa-tcaacacaattaatcattttcttaataatcatacacaaatctt 31894193  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| ||||||  | ||||||||||||    
T  31894192 aaacgattaatattgtgagacggagggag 31894164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 13087563 - 13087667
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||| ||||||| |||||| || ||||||||||| || |||||||||||| |||||| ||||||||||||||| ||  ||||||    
T  13087563 actaactataattaataaggatgttttagtaaatgatattaattttacca-ttgaaatcaacacaattaatcactttcttaataatcgtttatgaacctt 13087661  T
Q  171 aaacga 176  Q
    ||||||    
T  13087662 aaacga 13087667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 29363340 - 29363443
Alignment:
Q  72 ctaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctta 171  Q
    ||||||| ||||||||||| ||||||| |||||| ||||| |||||||||  ||||||||||||| ||||||||||||||||||| ||| | ||||||||    
T  29363340 ctaactacaattaataaggatgttttagtaaatgatactagttttaccatc-aaaatcaacacaattaatcattttcttaataattgtgcataaacctta 29363438  T
Q  172 aacga 176  Q
    |||||    
T  29363439 aacga 29363443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 71 - 173
Target Start/End: Original strand, 13909457 - 13909558
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||| ||||| ||||||  ||||||||||||| || |||||||||||  ||||||||| ||||||||||||| |||||| ||    
T  13909457 actaactacaattaataagggtattttagtaaatgtcactaattttacca-ttgaaatcaacacatttaatcatttccttaataatcgtgcacaaacttt 13909555  T
Q  171 aaa 173  Q
    |||    
T  13909556 aaa 13909558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 68 - 173
Target Start/End: Complemental strand, 6834453 - 6834349
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    ||||||||||||||||||||| ||||||||| |||||| || |||||| || | | ||||||||||||| |||| |||||||||||||||||| | ||||    
T  6834453 tctactaactataattaataaaggtgttttagtaaatgatattaatttgacta-tcaaaatcaacacaattaattattttcttaataatcgtgcataaac 6834355  T
Q  168 cttaaa 173  Q
     |||||    
T  6834354 tttaaa 6834349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 174
Target Start/End: Original strand, 21010212 - 21010312
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||| |||||||||||||| |||||| |||||||||| ||||  ||||| ||||||| ||||||||||||||||||| ||| | |||||||||    
T  21010212 taactacaatttataagggtgttttagtaaatgatactaatttttccatc-aaaattaacacaattaatcattttcttaataattgtgcataaaccttaa 21010310  T
Q  173 ac 174  Q
    ||    
T  21010311 ac 21010312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 176
Target Start/End: Complemental strand, 32440730 - 32440622
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    ||||||||| || ||||||||||||||||||| |||||  |||||||||||||| | ||||||||||||| ||||||||| || ||||| |||| | |||    
T  32440730 ctctactaattacaattaataagggtgttttagtaaataatactaattttacca-tcaaaatcaacacaattaatcatttcctaaataaccgtgcataaa 32440632  T
Q  167 ccttaaacga 176  Q
     |||||||||    
T  32440631 tcttaaacga 32440622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 3720322 - 3720211
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| |||||||  ||||| |||| |||||||  ||| ||| ||||||||| |||||||||  |||||||||||| |||||||||    
T  3720322 actaactacaattaataagagtgtttttgtaaatactacaaattttataattgaaa-tcaacacaattaatcatttcattaataatcgtgcacaaacctt 3720224  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  3720223 aaacgactaatat 3720211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 3291849 - 3291745
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||| ||| ||||| |||||  ||||||| |||||||| |||||| | |||| ||||||||| ||||||||||||| | |||||||    
T  3291849 actaactacaattaataaaggtattttagtaaataatactaatattaccatt-aaaatcgatacaattaatcatttccttaataatcgtgcaaaaacctt 3291751  T
Q  171 aaacga 176  Q
    ||||||    
T  3291750 aaacga 3291745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 181589 - 181699
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||| | ||||||| ||||| ||||||||||||| | || ||||||| |||| |||| ||||| ||||||||||||  ||||||||    
T  181589 actaactataattaataatgatgttttagtaaatactactaattttacta-ttgaaatcaatacaattaat-atttttttaataatcgtgctcaaacctt 181686  T
Q  171 aaacgaataatat 183  Q
    | |||| ||||||    
T  181687 agacgactaatat 181699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 6801964 - 6802047
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||||| |||||||||||| |||||| |||||| || ||||||||||| | |||||||||| || ||||||||||||||||||    
T  6801964 actaactacaattaataagggcgttttagtaaatgatattaattttacca-tcaaaatcaacataattaatcattttcttaataa 6802047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 71 - 158
Target Start/End: Complemental strand, 24983530 - 24983444
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcg 158  Q
    |||||||| ||||||||||||||||||| ||||||  ||||||||||||| || |||||||| ||| ||||||||| ||||| |||||    
T  24983530 actaactacaattaataagggtgttttagtaaatgacactaattttacca-ttgaaatcaactcaactaatcatttccttaagaatcg 24983444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 1956060 - 1955956
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| || | ||| |||||| |||||||||||||| || ||||||| |||| ||||| |||||||||| |  ||||| |||||||    
T  1956060 actaactacaattaataagagtatattagtaaatgatactaattttacca-ttgaaatcaatacaattaatctttttcttaattactgtgtataaacctt 1955962  T
Q  171 aaacga 176  Q
    ||||||    
T  1955961 aaacga 1955956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 176
Target Start/End: Complemental strand, 27448228 - 27448133
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||| | ||||||| |||||| ||||||||| | |||  ||||||||||||| ||||||||| ||||||||| ||| | |||||||||||||    
T  27448228 aattaataatgatgttttagtaaatgatactaatttcatcatc-aaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacga 27448133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 2423662 - 2423741
Alignment:
Q  82 ttaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgta 162  Q
    |||||||| ||||||||||||||| |||  ||||||||| ||||||||||||  | |||||||||||| ||||||| ||||    
T  2423662 ttaataagagtgttttaataaatgatacatattttacca-ttaaaatcaacaatattaatcattttctgaataatcatgta 2423741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 27367502 - 27367423
Alignment:
Q  86 taagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    ||||||||||||| ||||||| | ||||||||| | | ||||||||||||| |||||||||  |||||||||||| |||||    
T  27367502 taagggtgttttagtaaatgcaattaattttacaact-aaaatcaacacaattaatcatttctttaataatcgtgcacaaa 27367423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 27457849 - 27457770
Alignment:
Q  86 taagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    ||||||||||||| ||||||| | ||||||||| | | ||||||||||||| |||||||||  |||||||||||| |||||    
T  27457849 taagggtgttttagtaaatgcaattaattttacaact-aaaatcaacacaattaatcatttctttaataatcgtgcacaaa 27457770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 30716933 - 30717016
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||||| ||||||||||||||||| | |||||| |||||||||||||| | ||| |||| | || ||||||||| ||||||||    
T  30716933 actaactacaattaataagggtgtttaagtaaatgatactaattttacca-tcaaagtcaataaaattaatcatttccttaataa 30717016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 5302386 - 5302472
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||| ||||||||||| ||||||  |||||  || ||||||||||||  ||||||||||||  |||||||||||||||||| ||||    
T  5302386 taactacaattaataaggatgttttggtaaattatattaattttaccatc-aaaatcaacacatttaatcattttcttaataaccgtg 5302472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 117
Target Start/End: Complemental strand, 11143668 - 11143622
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaatttta 117  Q
    ||||||||||||||||||||||| |||| |||||| |||||||||||    
T  11143668 actaactataattaataagggtgatttagtaaatgatactaatttta 11143622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 106 - 183
Target Start/End: Complemental strand, 34639498 - 34639422
Alignment:
Q  106 ctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatat 183  Q
    |||||||||| |||||| ||| | ||||||| |||| |||| |||| ||||||||||||||||| |||||| ||||||    
T  34639498 ctactaatttcaccattgaaatt-aacacaattaattatttccttattaatcgtgtacaaacctcaaacgattaatat 34639422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 3180062 - 3179990
Alignment:
Q  274 agaaatgatatttgtacatccatttgt-gacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    ||||||||||||||||||  ||||| | ||||||||||||||||||||| ||||| |  |||| |||||||||    
T  3180062 agaaatgatatttgtacaatcattttttgacaactttatctcttatattcacattatcattttattctctctc 3179990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 7072230 - 7072297
Alignment:
Q  108 actaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||||||||| ||||||||||||| |||| |||||||||| |||  |  |||||||||||||||    
T  7072230 actaattttaccatt-aaaatcaacacaattaattattttcttaaaaattatacacaaaccttaaacga 7072297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 12340042 - 12340082
Alignment:
Q  122 ttaaaatcaacacaaataatcattttcttaataatcgtgta 162  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  12340042 ttaaaatcaacactactaatcattttcttaataatcgtgta 12340082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 131
Target Start/End: Complemental strand, 12605548 - 12605485
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaa 131  Q
    |||||||||||| ||||||||| |||||||||||||||| ||  |||||| ||| ||||||||||    
T  12605548 ctctactaactaaaattaataaaggtgttttaataaatgatataaattttgcca-ttaaaatcaa 12605485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 30714811 - 30714855
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||    
T  30714811 ttgtcacaaaagttatctcaaatgattgttcaaatatcactactc 30714855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 152
Target Start/End: Complemental strand, 1063684 - 1063604
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaa 152  Q
    |||||||| ||||| | || || ||||| |||||  ||||||||||| |||| ||| ||||||||| |||||||||||||||    
T  1063684 actaactacaattactcagagtattttagtaaataatactaattttatcattgaaa-tcaacacaattaatcattttcttaa 1063604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 345
Target Start/End: Complemental strand, 25338137 - 25338064
Alignment:
Q  273 aagaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    ||||||||||||||||| || || ||| |||||||||| ||||| ||||||||||  | |||||||||| ||||    
T  25338137 aagaaatgatatttgtatattcactttatgacaactttctctctcatatttacatcatatttttgttctatctc 25338064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 1225080 - 1225183
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||  | ||||| |||||  || ||||||||| ||||||| ||||||||| |||||||||  |||| | ||||| ||||  |||    
T  1225080 actaactaaaattaataagaatattttagtaaataatattaattttactatttaaa-tcaacacaattaatcatttctttaaaactcgtgcacaactctt 1225178  T
Q  171 aaacg 175  Q
    |||||    
T  1225179 aaacg 1225183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 2163703 - 2163775
Alignment:
Q  274 agaaatgatatttgtaca-tccatttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| || ||||||||||| ||| ||||| ||| ||||||| |  |||| |||||||||    
T  2163703 agaaatgatatttgtacaatcaatttgtgacaattttctctctcatacttacattatccttttattctctctc 2163775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 2175336 - 2175408
Alignment:
Q  274 agaaatgatatttgtaca-tccatttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| || ||||||||||| ||| ||||| ||| ||||||| |  |||| |||||||||    
T  2175336 agaaatgatatttgtacaatcaatttgtgacaattttctctctcatacttacattatccttttattctctctc 2175408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 123
Target Start/End: Complemental strand, 8115119 - 8115067
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccattt 123  Q
    |||||||| |||||||||| || ||||| |||||| ||||||||||| |||||    
T  8115119 actaactaaaattaataagagtattttagtaaatgatactaattttatcattt 8115067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 16337007 - 16336959
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||||| ||||||||||||||  | ||||||||||| |||||    
T  16337007 gaagttgtcacaagagttgtctcaaatggatgttcaaatatcattactc 16336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 387 - 427
Target Start/End: Original strand, 17457577 - 17457617
Alignment:
Q  387 cacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    ||||||||||||||||| ||||| ||||||||||| |||||    
T  17457577 cacaaaagttgtctcaattgattgttcaaatatcactactc 17457617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 30733147 - 30733191
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||||||||||| || || |||||||| |||||    
T  30733147 ttgtcacaaaagttgtctcaaatggttgtttaaatatcactactc 30733191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 16463722 - 16463826
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||||||||| ||||||||| |||||||| |||| | |||||||    
T  16463722 actaactacaattaataagggtgttttagtaaatgatactaattttacca-tcaaaatcaacacaattaatcatttccttaataaccgtgcataaacctt 16463820  T
Q  171 aaacga 176  Q
    ||||||    
T  16463821 aaacga 16463826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 45235616 - 45235718
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||||||||||||| |||||| || ||||||||||||| ||| |||||||||  |||||||| ||||||||||||| |||||||||||    
T  45235616 taactacaattaataagggtgttttagtaaatgatattaattttaccattgaaa-tcaacacaatcaatcatttccttaataatcgtgcacaaaccttaa 45235714  T
Q  173 acga 176  Q
    ||||    
T  45235715 acga 45235718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 5789728 - 5789604
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| | || || |||| |||| ||||||||| ||||||||||||| |||||||||    
T  5789728 actaactacaattaataagggtgttttagtaaatgccactaattttacta-ttgaattcaatacaattaatcatttccttaataatcgtgcacaaacctt 5789630  T
Q  171 aaacgaataatatcatcagacggagg 196  Q
    ||| || ||||||  | |||||||||    
T  5789629 aaatgactaatattgtgagacggagg 5789604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 16805914 - 16806016
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | ||||| |||||| |||||||||||| ||| ||||||||||||| |||||||||  |||||||||||| |||||||||    
T  16805914 actaactacaattaataaggatattttagtaaatgatactaattttactatt-aaaatcaacacaattaatcatttctttaataatcgtgcacaaacctt 16806012  T
Q  171 aaac 174  Q
    ||||    
T  16806013 aaac 16806016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 16845195 - 16845297
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | ||||| |||||| |||||||||||| ||| ||||||||||||| |||||||||  |||||||||||| |||||||||    
T  16845195 actaactacaattaataaggatattttagtaaatgatactaattttactatt-aaaatcaacacaattaatcatttctttaataatcgtgcacaaacctt 16845293  T
Q  171 aaac 174  Q
    ||||    
T  16845294 aaac 16845297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 37322461 - 37322566
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcatttt-cttaataatcgtgtacaaacct 169  Q
    |||||||| ||||||||||||| |||||||||||| || ||||||||||| || ||||||||||||  ||||||||| ||||||||||||| | ||||||    
T  37322461 actaactacaattaataagggtattttaataaatgatattaattttacca-ttgaaatcaacacaatcaatcattttccttaataatcgtgcataaacct 37322559  T
Q  170 taaacga 176  Q
    |||||||    
T  37322560 taaacga 37322566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 31448773 - 31448669
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||  ||||| ||||||||||||| ||||||   |||||||||||||  ||||||||||||| ||||||||| ||||||||||||| |||||||||    
T  31448773 actaactgcaattagtaagggtgttttagtaaatgactctaattttaccatc-aaaatcaacacaattaatcatttccttaataatcgtgcacaaacctt 31448675  T
Q  171 aaacga 176  Q
    ||||||    
T  31448674 aaacga 31448669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 160
Target Start/End: Original strand, 35313920 - 35314008
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| ||||||||||| || |||||||||| ||||||||||||||| || |||||||||||| ||||||||| |||||||||||||    
T  35313920 actaactacaattaataaggttgctttaataaatactactaattttacca-ttgaaatcaacacaattaatcatttccttaataatcgtg 35314008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 39691523 - 39691627
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||  |||||||||| || ||||| |||||| || |||||||| |||| ||| ||||||||| ||||||||||||||||||||||| |||||||||    
T  39691523 actaactgcaattaataagagtattttagtaaatgatattaattttatcattgaaa-tcaacacaattaatcattttcttaataatcgtgcacaaacctt 39691621  T
Q  171 aaacga 176  Q
    ||||||    
T  39691622 aaacga 39691627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 8947132 - 8947021
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||| ||||||| |||||  ||||||||||| || || |||||||||||| ||||||||| |||||||||  || |||||| ||    
T  8947132 actaactataattaataaggatgttttagtaaatattactaattttatca-ttgaaatcaacacaattaatcatttccttaataattatgcacaaacttt 8947034  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  8947033 aaacgattaatat 8947021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 96 - 183
Target Start/End: Complemental strand, 3323341 - 3323255
Alignment:
Q  96 ttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatat 183  Q
    |||||||||| |||||||||||||||| ||| ||||||||| ||||||||||  ||||||||||| ||||||||||||||| ||||||    
T  3323341 ttaataaatgttactaattttaccattgaaa-tcaacacaattaatcatttttataataatcgtgcacaaaccttaaacgactaatat 3323255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 15359167 - 15359063
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||||| || |||||||| || | ||||||||||||| ||||||| |||||||||| |||| |  ||||||    
T  15359167 actaactacaattaataagggtgttttagtaaatgatattaattttatca-tcaaaatcaacacaattaatcatcttcttaataaccgtgcatcaacctt 15359069  T
Q  171 aaacga 176  Q
    ||||||    
T  15359068 aaacga 15359063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 176
Target Start/End: Original strand, 17695359 - 17695467
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    |||||||||||||||||||||||  | ||||  |||||| ||  |||||||||||| ||| |||| |||| ||||||||| ||||||||||||| |||||    
T  17695359 ctctactaactataattaataagaatatttttgtaaatgatatcaattttaccattgaaa-tcaatacaattaatcatttccttaataatcgtgcacaaa 17695457  T
Q  167 ccttaaacga 176  Q
    ||||||||||    
T  17695458 ccttaaacga 17695467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 174
Target Start/End: Original strand, 34225625 - 34225725
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||||||||||||| |||||  |||||| ||||||| |||||||||| | || || |||||| ||||||||||||| |||||||||||    
T  34225625 taactacaattaataagggtgttttagtaaataatactaagtttacca-ttaaaatcaatataattattcatttccttaataatcgtgcacaaaccttaa 34225723  T
Q  173 ac 174  Q
    ||    
T  34225724 ac 34225725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 19937733 - 19937814
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||| |||||| || ||||||||||||| ||| ||||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  19937733 ttttagtaaatgatattaattttaccattgaaa-tcaacacaattaatcatttccttaataatcgtgcacaaaccttaaacga 19937814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 36354523 - 36354422
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| |||||||||| |||||| |||||||  |||||||||||||| | ||||||||||||| || |||||| ||||||||||||  | |||||||    
T  36354523 actaactacaattaataagagtgtttcaataaataatactaattttacca-tcaaaatcaacacaactagtcatttccttaataatcgtacataaacctt 36354425  T
Q  171 aaa 173  Q
    |||    
T  36354424 aaa 36354422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 73 - 174
Target Start/End: Original strand, 25637516 - 25637615
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||| ||||||||| ||||||  ||||||||||||| | ||||||||||||| ||||||||| ||| ||||||||| | |||||||||    
T  25637516 taactacaattaataaaggtgttttagtaaatgacactaattttacca-tcaaaatcaacacaattaatcatttcctt-ataatcgtgcataaaccttaa 25637613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 71 - 183
Target Start/End: Complemental strand, 16377736 - 16377625
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | ||||  |||||| || |||||||||||||  || ||||||||| |||||||||  |||||||||||| ||||| |||    
T  16377736 actaactacaattaataaggttattttggtaaatgatattaattttaccattgtaa-tcaacacaattaatcatttctttaataatcgtgcacaaatctt 16377638  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  16377637 aaacgattaatat 16377625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 26608008 - 26607946
Alignment:
Q  111 aattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaac 174  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||||||||||    
T  26608008 aattttaccattgaaa-tcaacacaattaatcattttcttaataatcgtgcacaaaccttaaac 26607946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 14523452 - 14523348
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | ||||| |||||| || ||||||||||| || ||||||||||||| |||||||| |||||||| | || | |||| ||    
T  14523452 actaactacaattaataaggatattttagtaaatgatattaattttacca-ttgaaatcaacacaaaaaatcatttccttaataaccttgcataaacttt 14523354  T
Q  171 aaacga 176  Q
    ||||||    
T  14523353 aaacga 14523348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Complemental strand, 43115882 - 43115778
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||| |||||| || ||||| ||||||||||||| |||| |||| ||| ||||||||| |||||||||  |||||||||| | |||||| ||    
T  43115882 actaactacaataaataagagtattttagtaaatgctactaactttatcattgaaa-tcaacacaattaatcatttctttaataatcgcgcacaaacttt 43115784  T
Q  171 aaacga 176  Q
    ||||||    
T  43115783 aaacga 43115778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 36794317 - 36794400
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||||| | |||||||||| |||||| |||| | |||||||||||||| | ||||||||||||| ||||||||| ||||||||    
T  36794317 actaactacagttaataagggcgttttagtaaaagatactaattttacca-tcaaaatcaacacaattaatcatttccttaataa 36794400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 176
Target Start/End: Original strand, 39785620 - 39785725
Alignment:
Q  73 taactataattaataagggtgttttaataaatgcta---ctaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacct 169  Q
    |||||| |||||||||| |||||||| |||||| ||   |||||||||||||  ||||||||||||| ||||||||| |||||||| |||| |  |||||    
T  39785620 taactacaattaataagagtgttttagtaaatgatagtactaattttaccatc-aaaatcaacacaattaatcatttccttaataaccgtgcatcaacct 39785718  T
Q  170 taaacga 176  Q
    |||||||    
T  39785719 taaacga 39785725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 39443799 - 39443857
Alignment:
Q  125 aaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatat 183  Q
    ||||||||| || ||||||||||||||||||| ||| ||||||||||||||| ||||||    
T  39443799 aaatcaacaaaattaatcattttcttaataattgtgcacaaaccttaaacgactaatat 39443857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 27538975 - 27538886
Alignment:
Q  274 agaaatgatatttgtacatccatttgtg-acaactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||||| |||||| || |||||||| ||| | ||| | ||||| | || || ||||||||||||||||||||||||||    
T  27538975 agaaatgatatttgtacaaccatttttgtacaactttctctatgatactcacattatcttcttattctctctccattgtttttgaccaat 27538886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 173
Target Start/End: Original strand, 32783406 - 32783498
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    ||||||||| ||||||||| |||||| || ||||||||| ||  ||||| ||||||| |||||||||||||||||| |||| |  |||||||||    
T  32783406 aattaataaaggtgttttagtaaatgatattaattttactatc-aaaataaacacaattaatcattttcttaataaccgtgcatcaaccttaaa 32783498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 73 - 173
Target Start/End: Original strand, 43410461 - 43410560
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| ||||||||||| | ||||| |||||| || |||||||| |||| | | ||||||||| |||| |||| ||||||||||||| |||||| ||||    
T  43410461 taactacaattaataaggatattttagtaaatgatattaattttatcattgata-tcaacacaattaataatttccttaataatcgtgcacaaacattaa 43410559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 43699670 - 43699595
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataat 156  Q
    |||||||| | || |||||||||||| |||||||||||| ||| ||| ||||||||  |||||||||||||||||||    
T  43699670 aattaataggtgtattttaataaatgatactaattttactattgaaa-tcaacacagttaatcattttcttaataat 43699595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 73 - 183
Target Start/End: Complemental strand, 39329742 - 39329630
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaa--cacaaataatcattttcttaataatcgtgtac-aaacct 169  Q
    |||||| |||||||||| |||||||| ||||||||| |||||||| |||| ||| ||||  ||||| | ||||||||||||  ||||||| || |||| |    
T  39329742 taactacaattaataagagtgttttagtaaatgctattaattttatcattgaaa-tcaatacacaattgatcattttcttagaaatcgtgcacaaaacgt 39329644  T
Q  170 taaacgaataatat 183  Q
    ||||||| ||||||    
T  39329643 taaacgactaatat 39329630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 175
Target Start/End: Complemental strand, 34120496 - 34120416
Alignment:
Q  94 ttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacg 175  Q
    ||||| |||||  ||||| |||||||||  ||||||||||||| |||||||||||||||||||| || | |||| |||||||    
T  34120496 ttttagtaaataatactagttttaccatc-aaaatcaacacaattaatcattttcttaataatcatgcataaactttaaacg 34120416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 3091875 - 3091923
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactc 427  Q
    |||||||||||||||||||| |||||| ||| ||||||||||| |||||    
T  3091875 gaagttgtcacaaaagttgtatcaaataattgttcaaatatcactactc 3091923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 345
Target Start/End: Original strand, 43725217 - 43725289
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||||| | ||| |||||||||| ||||| ||| | ||||| ||||||| |||||||||    
T  43725217 agaaatgatatttgtacatctactttatgacaactttctctctcatactcacattatgtttttattctctctc 43725289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 171
Target Start/End: Complemental strand, 1206781 - 1206683
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatca-ttttcttaataatcgtgtacaaacctta 171  Q
    |||||| ||||||||||| | ||||| |||||| ||||||||||||||  | ||||||||| || |||||| ||||||||  |||| || ||||||||||    
T  1206781 taactacaattaataaggatattttagtaaatgttactaattttacca-ctgaaatcaacataattaatcatttttcttacaaatcatgaacaaacctta 1206683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 118
Target Start/End: Original strand, 3601417 - 3601464
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttac 118  Q
    |||||||| ||||||||||||||||||| ||||||| |||| ||||||    
T  3601417 actaactacaattaataagggtgttttagtaaatgcaactatttttac 3601464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 327
Target Start/End: Complemental strand, 6511620 - 6511561
Alignment:
Q  269 ttataagaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacatt 327  Q
    |||| |||||||||||||| ||||||| |||||||||| ||| ||||| |||||||||||    
T  6511620 ttatgagaaatgatatttggacatccattttgtgacaattttctctctcatatttacatt 6511561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 309
Target Start/End: Original strand, 17826052 - 17826087
Alignment:
Q  274 agaaatgatatttgtacatccatttgtgacaacttt 309  Q
    |||||||||||||||||| |||||||||||||||||    
T  17826052 agaaatgatatttgtacaaccatttgtgacaacttt 17826087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 19426492 - 19426563
Alignment:
Q  75 actataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattt 146  Q
    |||| ||||||||| | | ||||| |||||| | ||||||||| |||| ||||||||||||| |||||||||    
T  19426492 actacaattaataatgatattttagtaaatgttgctaattttatcattgaaaatcaacacaattaatcattt 19426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 327
Target Start/End: Complemental strand, 3012904 - 3012850
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacatt 327  Q
    |||||||||||||| ||||||| |||||||||||||| ||||| ||| |||||||    
T  3012904 agaaatgatatttgaacatccattttgtgacaactttctctctcatacttacatt 3012850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 11367113 - 11367214
Alignment:
Q  72 ctaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctta 171  Q
    |||| |||||||||||| ||| ||| | ||||||  | ||||||||| ||| ||||||||||||| ||||||| |||||| ||||| || || ||| |||    
T  11367113 ctaattataattaataaaggtatttaagtaaatgacattaattttacaatt-aaaatcaacacaattaatcatcttcttactaatcttgcacgaacttta 11367211  T
Q  172 aac 174  Q
    |||    
T  11367212 aac 11367214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 14714120 - 14714170
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaa 429  Q
    ||||||||||||||| ||||||||||||  | ||||||||||| |||||||    
T  14714120 gaagttgtcacaaaaattgtctcaaatggatgttcaaatatcactactcaa 14714170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 315
Target Start/End: Complemental strand, 25801872 - 25801830
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctct 315  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  25801872 agaaatgatatttgtacaaccaatttgtgacaactttatctct 25801830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 26277108 - 26277154
Alignment:
Q  274 agaaatgatatttgtacatccattt-gtgacaactttatctcttata 319  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||||    
T  26277108 agaaatgatatttgaacatccatttagtgacaactttctctcttata 26277154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 38464472 - 38464530
Alignment:
Q  304 aactttatctcttatatttacattgtgtttttgttctctctccattgtttttgaccaat 362  Q
    |||||||||||||||| | ||||| ||||||| || |||||| || |||||||||||||    
T  38464472 aactttatctcttatactcacattatgttttttttttctctctatagtttttgaccaat 38464530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 383 - 421
Target Start/End: Complemental strand, 41195628 - 41195590
Alignment:
Q  383 ttgtcacaaaagttgtctcaaatgattattcaaatatca 421  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  41195628 ttgtcacaaaagttgtcaaaaatgattattcaaatatca 41195590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 354
Target Start/End: Complemental strand, 1907799 - 1907739
Alignment:
Q  296 tttgtgacaactttatctcttatatttacattgtgttttt--gttctctctccattgtttt 354  Q
    |||||||||||||||||||| ||||||| ||| |||||||   ||||||||| ||||||||    
T  1907799 tttgtgacaactttatctctcatatttatattatgtttttactttctctctctattgtttt 1907739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 22195761 - 22195810
Alignment:
Q  386 tcacaaaagttgtctcaaatgattattcaaatatcaatactcaaaattta 435  Q
    |||||||| || |||||||| ||||||||||||||| |||||||| ||||    
T  22195761 tcacaaaaattatctcaaataattattcaaatatcactactcaaatttta 22195810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 428
Target Start/End: Complemental strand, 23344926 - 23344877
Alignment:
Q  379 gaagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactca 428  Q
    |||||||||| || ||||||||||||||| | ||||||||||| ||||||    
T  23344926 gaagttgtcagaagagttgtctcaaatgaatgttcaaatatcactactca 23344877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 26337201 - 26337141
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaac 132  Q
    |||||||||||||||||  |||||||||||||||| ||  ||||||| || |||||||||||    
T  26337201 actaactataattaatagaggtgttttaataaatgatatcaattttaaca-ttaaaatcaac 26337141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 27501582 - 27501514
Alignment:
Q  107 tactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||||||||||| ||| |||||| || | ||||||| |||||||||| |  |||||||||||||||    
T  27501582 tactaattttaccattgaaa-tcaacataatttatcatttccttaataatcatacacaaaccttaaacga 27501514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 33729944 - 33729907
Alignment:
Q  125 aaatcaacacaaataatcattttcttaataatcgtgta 162  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  33729944 aaatcaacactaataatcattttcttaataaccgtgta 33729907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 12520891 - 12520836
Alignment:
Q  110 taattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaa 166  Q
    ||||||||||||| ||||||||||||| |||| ||||| || ||||||||| |||||    
T  12520891 taattttaccatt-aaaatcaacacaattaattattttattgataatcgtgcacaaa 12520836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 19695750 - 19695678
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    ||||||||||||||||||  || ||| |||||||||| ||||||||||| ||||| |  |||| |||||||||    
T  19695750 agaaatgatatttgtacaatcactttttgacaactttctctcttatattcacattatacttttattctctctc 19695678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 168
Target Start/End: Complemental strand, 28170666 - 28170567
Alignment:
Q  68 tctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaac 167  Q
    |||| |||||| ||||||||| | |||  || ||||||| ||||||||||||  || ||||||||| || |||||||||| | |||| ||||| ||||||    
T  28170666 tctattaactacaattaataaagctgtactagtaaatgcaactaattttacc-cttgaaatcaacataattaatcattttttaaatactcgtgcacaaac 28170568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 155
Target Start/End: Original strand, 31976381 - 31976464
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataa 155  Q
    |||||||||||||| |||| |||||||| ||||||  ||  ||||||| | || |||||||||| | ||||||||| ||||||||    
T  31976381 actaactataattattaagagtgttttagtaaatgaaacatattttacta-ttgaaatcaacactactaatcatttccttaataa 31976464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 38763584 - 38763671
Alignment:
Q  74 aactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgta 162  Q
    |||||||||||||| | || ||||| ||||||  ||  ||||||||||| ||||||||||| | ||| ||||| |||||||| ||||||    
T  38763584 aactataattaatatgagtattttagtaaatgaaacacattttaccatt-aaaatcaacactactaaccatttccttaataaccgtgta 38763671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 67 - 146
Target Start/End: Original strand, 43730644 - 43730720
Alignment:
Q  67 ctctactaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattt 146  Q
    ||||| |||||| ||||||||||| |  |||| |||||| || ||||||||||| ||||||||||||||  |||||||||    
T  43730644 ctctagtaactacaattaataaggtt--tttagtaaatgatattaattttacca-ttaaaatcaacacacctaatcattt 43730720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 314 - 354
Target Start/End: Complemental strand, 43762122 - 43762082
Alignment:
Q  314 cttatatttacattgtgtttttgttctctctccattgtttt 354  Q
    |||||||||||||||||||||| || |||||| ||||||||    
T  43762122 cttatatttacattgtgtttttattttctctctattgtttt 43762082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 73 - 197
Target Start/End: Original strand, 16133 - 16256
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||| |||||||||| |||||||| ||||||||| |||||||| |||| ||||||||||||| ||||||||| ||||||||||||| ||||| |||||    
T  16133 taactacaattaataagtgtgttttagtaaatgctattaattttatcatt-aaaatcaacacaattaatcatttccttaataatcgtgaacaaatcttaa 16231  T
Q  173 acgaataatatcatcagacggaggg 197  Q
    || | ||||||  | ||||||||||    
T  16232 actactaatattgtgagacggaggg 16256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 71 - 199
Target Start/End: Complemental strand, 136119 - 135992
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||  | |||||||||  |||||||||||| | ||| |||    
T  136119 actaactataattaataagggtgttttagtaaatgctattaattttacca-ttgaaatcaacattattaatcatttatttaataatcgtgcataaatctt 136021  T
Q  171 aaacgaataatatcatcagacggagggag 199  Q
    |||||| ||||||  | ||||||||||||    
T  136020 aaacgactaatattgtgagacggagggag 135992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 34101 - 33977
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||| | || || |||| |||| ||||||||| ||||||||||||| |||||||||    
T  34101 actaactacaattaataagggtgttttagtaaatgccactaattttacta-ttgaattcaatacaattaatcatttccttaataatcgtgcacaaacctt 34003  T
Q  171 aaacgaataatatcatcagacggagg 196  Q
    ||| || ||||||  | |||||||||    
T  34002 aaatgactaatattgtgagacggagg 33977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0330 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0330
Description:

Target: scaffold0330; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 5423 - 5527
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| | ||||| |||||| || ||||||||||||| ||  ||||||||  |||||||||||||||||||| ||||||||||||    
T  5423 actaactaaaattaataaggatattttagtaaatgatattaattttaccattgaat-tcaacacagttaatcattttcttaataatcatgtacaaacctt 5521  T
Q  171 aaacga 176  Q
    ||||||    
T  5522 aaacga 5527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 75 - 176
Target Start/End: Original strand, 1741 - 1841
Alignment:
Q  75 actataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaac 174  Q
    |||| |||||||| |||||||| | |||||| |||||||||||||||  |||||||||| || |||||||||||||||||| |||||| ||| |||||||    
T  1741 actacaattaatacgggtgtttaagtaaatgatactaattttaccatc-aaaatcaacataattaatcattttcttaataaccgtgtataaatcttaaac 1839  T
Q  175 ga 176  Q
    ||    
T  1840 ga 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 50237 - 50348
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    ||||||| |||||||||| | | || || |||||| ||||||||||| |||| ||| | ||||||| ||||||||| ||||||||||||| |||||||||    
T  50237 actaactgtaattaataaagatattatagtaaatgatactaattttatcattgaaatt-aacacaattaatcatttccttaataatcgtgcacaaacctt 50335  T
Q  171 aaacgaataatat 183  Q
    |||||| ||||||    
T  50336 aaacgactaatat 50348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 173
Target Start/End: Original strand, 22660 - 22708
Alignment:
Q  123 taaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaa 173  Q
    |||||||||||||| ||||||||||||||||||  |||| |||||||||||    
T  22660 taaaatcaacacaattaatcattttcttaataa--gtgtgcaaaccttaaa 22708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 49; Significance: 9e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 71 - 175
Target Start/End: Original strand, 105717 - 105820
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||||||||||| |||| |||| ||||||||||| || |||| ||||||| ||||||||| |||||||||| || | ||| |||    
T  105717 actaactacaattaataagggtgttttagtaaacgctattaattttacca-ttgaaataaacacaattaatcatttacttaataatcatgcataaatctt 105815  T
Q  171 aaacg 175  Q
    |||||    
T  105816 aaacg 105820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1391 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1391
Description:

Target: scaffold1391; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 1897 - 1798
Alignment:
Q  73 taactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaa 172  Q
    |||||||||||||||| ||||||||| |||||| || |||||| || ||  ||||||||||||| |||| |||||||||||||||||| | |||| ||||    
T  1897 taactataattaataaaggtgttttagtaaatgatattaatttgactatc-aaaatcaacacaattaattattttcttaataatcgtgcataaactttaa 1799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 71 - 173
Target Start/End: Complemental strand, 20435 - 20334
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||  ||||||||||||| ||||| |||||| ||||||||||| || | ||||||||||||| |||||||||  ||||||||| || |||| ||||    
T  20435 actaactgcaattaataagggtattttactaaatgatactaatttta-caatcaaaatcaacacaattaatcatttaattaataatcttgcacaaccctt 20337  T
Q  171 aaa 173  Q
    |||    
T  20336 aaa 20334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0583 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0583
Description:

Target: scaffold0583; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 176
Target Start/End: Original strand, 2058 - 2162
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaacctt 170  Q
    |||||||| ||||||||||| ||||||| |||||| || |||||||| || || |||| ||||||| |||||| || ||||||||||||| |  ||||||    
T  2058 actaactacaattaataaggatgttttagtaaatgatattaattttatca-ttgaaattaacacaattaatcacttccttaataatcgtgcatgaacctt 2156  T
Q  171 aaacga 176  Q
    ||||||    
T  2157 aaacga 2162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 80 - 176
Target Start/End: Original strand, 39130 - 39225
Alignment:
Q  80 aattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    ||||||||| | ||||||| |||||| ||||||||| | |||  ||||||||||||| ||||||||| ||||||||| ||| | |||||||||||||    
T  39130 aattaataatgatgttttagtaaatgatactaatttcatcatc-aaaatcaacacaattaatcatttccttaataattgtgcaaaaaccttaaacga 39225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Complemental strand, 252575 - 252507
Alignment:
Q  107 tactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||||||||||||||| |||||||||| || |||||||||  ||||||||| |   ||||||||||||||    
T  252575 tactaattttaccatt-aaaatcaacataattaatcatttctttaataatcatacgcaaaccttaaacga 252507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 1055 - 1129
Alignment:
Q  108 actaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacgaataatat 183  Q
    ||||||||||||||| ||| |||||| || |||||||||| |||||||||||||  ||| ||||||||| ||||||    
T  1055 actaattttaccattgaaa-tcaacataattaatcatttttttaataatcgtgtgtaaatcttaaacgactaatat 1129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1809 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1809
Description:

Target: scaffold1809; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 766 - 697
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataat 141  Q
    |||||||| ||| ||||| ||||||||| ||||||||| ||||||||||| || |||||||||||| ||||    
T  766 actaactacaatcaataaaggtgttttagtaaatgctattaattttacca-ttgaaatcaacacaattaat 697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 326
Target Start/End: Original strand, 11159 - 11212
Alignment:
Q  274 agaaatgatatttgtacatccatttgtg-acaactttatctcttatatttacat 326  Q
    |||||||||||||||||| |||||| || |||||||||||||||||| ||||||    
T  11159 agaaatgatatttgtacaaccatttttgaacaactttatctcttatacttacat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 71 - 160
Target Start/End: Complemental strand, 8063 - 7975
Alignment:
Q  71 actaactataattaataagggtgttttaataaatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtg 160  Q
    |||||||| ||||||||||||||||||  |||||  || ||||||||||| |  ||||||||| || ||||||||| |||||||| ||||    
T  8063 actaactacaattaataagggtgttttggtaaataatattaattttacca-tccaaatcaacaaaattaatcatttccttaataaccgtg 7975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 6336 - 6263
Alignment:
Q  102 aatgctactaattttaccatttaaaatcaacacaaataatcattttcttaataatcgtgtacaaaccttaaacga 176  Q
    |||| ||||||||||| |||| | ||||||||||| |||||||||  |||| ||||||| |||||| ||||||||    
T  6336 aatgatactaattttatcatt-agaatcaacacaattaatcatttcgttaaaaatcgtgcacaaactttaaacga 6263  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 380 - 434
Target Start/End: Complemental strand, 9784 - 9730
Alignment:
Q  380 aagttgtcacaaaagttgtctcaaatgattattcaaatatcaatactcaaaattt 434  Q
    |||||||||||||||||| |||| |||||| |||||||| || |||||| |||||    
T  9784 aagttgtcacaaaagttgcctcatatgattgttcaaataacactactcataattt 9730  T

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Target: scaffold0100 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 326
Target Start/End: Original strand, 44787 - 44840
Alignment:
Q  274 agaaatgatatttgtacatcca-tttgtgacaactttatctcttatatttacat 326  Q
    |||||||||||||| ||||||| |||||||||||||| ||||| ||| ||||||    
T  44787 agaaatgatatttgaacatccattttgtgacaactttctctctcatacttacat 44840  T

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Target: scaffold0286 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 345
Target Start/End: Complemental strand, 18706 - 18634
Alignment:
Q  274 agaaatgatatttgtaca-tccatttgtgacaactttatctcttatatttacattgtgtttttgttctctctc 345  Q
    |||||||||||||||||| || ||||||||||| ||| ||||| ||| ||||||| |  |||| |||||||||    
T  18706 agaaatgatatttgtacaatcaatttgtgacaattttctctctcatacttacattatccttttattctctctc 18634  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 183
Target Start/End: Complemental strand, 84424 - 84384
Alignment:
Q  143 attttcttaataatcgtgtacaaaccttaaacgaataatat 183  Q
    |||| ||||||||||||| ||||||||||||||| ||||||    
T  84424 atttgcttaataatcgtgcacaaaccttaaacgactaatat 84384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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