View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1139_high_8 (Length: 649)

Name: NF1139_high_8
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1139_high_8
NF1139_high_8
[»] chr1 (37 HSPs)
chr1 (74-557)||(6769921-6770404)
chr1 (489-557)||(29210412-29210480)
chr1 (490-557)||(38162850-38162917)
chr1 (487-557)||(18043159-18043229)
chr1 (489-557)||(29657770-29657838)
chr1 (490-557)||(5694321-5694388)
chr1 (487-557)||(30657605-30657675)
chr1 (487-557)||(47009990-47010060)
chr1 (487-557)||(51065867-51065937)
chr1 (484-557)||(12072181-12072254)
chr1 (488-557)||(42770109-42770178)
chr1 (488-557)||(47532789-47532857)
chr1 (489-557)||(19031934-19032002)
chr1 (489-557)||(45431278-45431345)
chr1 (486-549)||(12306914-12306977)
chr1 (490-557)||(17333401-17333467)
chr1 (490-557)||(24178582-24178649)
chr1 (486-557)||(51368904-51368975)
chr1 (488-553)||(15227737-15227802)
chr1 (489-557)||(13961211-13961278)
chr1 (522-557)||(39497339-39497374)
chr1 (479-557)||(10976021-10976099)
chr1 (523-557)||(15282633-15282667)
chr1 (491-557)||(19011115-19011180)
chr1 (488-557)||(29683193-29683263)
chr1 (488-553)||(9266851-9266916)
chr1 (488-557)||(14350396-14350465)
chr1 (492-557)||(38702052-38702117)
chr1 (497-549)||(48383238-48383290)
chr1 (490-557)||(3784832-3784899)
chr1 (490-553)||(28481844-28481907)
chr1 (490-557)||(30294500-30294567)
chr1 (523-557)||(3097692-3097726)
chr1 (488-549)||(28726032-28726094)
chr1 (523-557)||(50128291-50128325)
chr1 (488-557)||(35985740-35985808)
chr1 (489-557)||(48071482-48071549)
[»] chr6 (26 HSPs)
chr6 (477-557)||(12525706-12525786)
chr6 (483-557)||(3515759-3515833)
chr6 (488-557)||(1391297-1391365)
chr6 (488-553)||(7851282-7851347)
chr6 (488-557)||(20897946-20898015)
chr6 (488-553)||(23402136-23402201)
chr6 (484-557)||(27433486-27433559)
chr6 (490-557)||(392096-392163)
chr6 (490-557)||(21878466-21878533)
chr6 (490-557)||(23629695-23629761)
chr6 (492-557)||(2350654-2350719)
chr6 (490-557)||(12145236-12145303)
chr6 (490-553)||(29978233-29978295)
chr6 (485-550)||(32929634-32929699)
chr6 (488-557)||(34396646-34396715)
chr6 (489-557)||(13529454-13529522)
chr6 (489-557)||(29451234-29451301)
chr6 (487-557)||(18276734-18276803)
chr6 (488-557)||(4215693-4215762)
chr6 (488-557)||(14559920-14559989)
chr6 (489-557)||(31280320-31280388)
chr6 (514-557)||(13417081-13417124)
chr6 (514-557)||(34477669-34477712)
chr6 (523-557)||(26467243-26467277)
chr6 (500-557)||(32985312-32985369)
chr6 (490-531)||(34712271-34712312)
[»] chr2 (26 HSPs)
chr2 (488-557)||(31390010-31390079)
chr2 (487-557)||(561637-561707)
chr2 (488-557)||(30486208-30486277)
chr2 (489-557)||(32360988-32361056)
chr2 (488-557)||(34442651-34442719)
chr2 (490-557)||(8969526-8969591)
chr2 (489-557)||(22887749-22887817)
chr2 (489-557)||(26891782-26891850)
chr2 (490-553)||(20552931-20552994)
chr2 (488-559)||(22068436-22068507)
chr2 (490-557)||(31438646-31438713)
chr2 (490-557)||(44587902-44587969)
chr2 (488-557)||(26387183-26387252)
chr2 (485-557)||(2898067-2898138)
chr2 (497-557)||(4381802-4381862)
chr2 (488-557)||(27856515-27856584)
chr2 (488-557)||(38590993-38591062)
chr2 (489-557)||(6580188-6580256)
chr2 (492-558)||(16807342-16807409)
chr2 (492-558)||(16846623-16846690)
chr2 (490-553)||(38296178-38296240)
chr2 (490-557)||(43637165-43637231)
chr2 (523-557)||(5881250-5881284)
chr2 (516-557)||(5093658-5093699)
chr2 (488-553)||(32860100-32860165)
chr2 (479-520)||(35851925-35851966)
[»] chr8 (34 HSPs)
chr8 (487-557)||(168463-168533)
chr8 (488-557)||(27988618-27988687)
chr8 (488-557)||(28045920-28045989)
chr8 (489-557)||(43119216-43119284)
chr8 (483-557)||(13643005-13643079)
chr8 (483-557)||(13743430-13743504)
chr8 (488-557)||(4537863-4537932)
chr8 (488-557)||(4648193-4648261)
chr8 (490-557)||(16394180-16394247)
chr8 (490-557)||(30675691-30675758)
chr8 (499-557)||(29444259-29444317)
chr8 (488-557)||(10618016-10618085)
chr8 (492-557)||(20831672-20831737)
chr8 (488-557)||(33357248-33357317)
chr8 (489-557)||(11112638-11112706)
chr8 (498-558)||(36923781-36923841)
chr8 (490-557)||(12652630-12652697)
chr8 (490-553)||(34228682-34228745)
chr8 (488-557)||(9063171-9063239)
chr8 (480-557)||(16785077-16785153)
chr8 (523-557)||(7304637-7304671)
chr8 (491-557)||(16888663-16888728)
chr8 (503-557)||(42035100-42035154)
chr8 (488-557)||(9278210-9278279)
chr8 (513-557)||(16890599-16890643)
chr8 (497-557)||(32113915-32113975)
chr8 (517-557)||(36730471-36730511)
chr8 (490-557)||(2805379-2805446)
chr8 (490-557)||(37373206-37373272)
chr8 (523-557)||(9537943-9537977)
chr8 (491-557)||(21595848-21595913)
chr8 (523-557)||(40831310-40831344)
chr8 (490-550)||(39751597-39751658)
chr8 (489-557)||(3930352-3930419)
[»] chr3 (30 HSPs)
chr3 (487-557)||(18014669-18014739)
chr3 (488-557)||(40362699-40362768)
chr3 (489-557)||(272219-272287)
chr3 (486-557)||(52520677-52520748)
chr3 (487-557)||(46352631-46352701)
chr3 (489-553)||(41304004-41304068)
chr3 (489-557)||(49893330-49893398)
chr3 (490-557)||(4168183-4168250)
chr3 (490-557)||(20923992-20924059)
chr3 (490-557)||(39074419-39074486)
chr3 (490-557)||(43786871-43786938)
chr3 (488-557)||(858587-858656)
chr3 (490-553)||(48725271-48725334)
chr3 (490-557)||(52246582-52246649)
chr3 (488-557)||(11308329-11308398)
chr3 (488-557)||(13159895-13159964)
chr3 (514-558)||(22248910-22248954)
chr3 (511-555)||(49529390-49529434)
chr3 (497-557)||(50395681-50395741)
chr3 (490-558)||(51818993-51819061)
chr3 (483-557)||(53489943-53490019)
chr3 (497-557)||(41554059-41554118)
chr3 (490-557)||(10617403-10617469)
chr3 (499-557)||(42964368-42964426)
chr3 (499-557)||(43269858-43269916)
chr3 (523-557)||(52718200-52718234)
chr3 (490-550)||(2362801-2362861)
chr3 (513-557)||(2391630-2391674)
chr3 (513-557)||(2393391-2393435)
chr3 (513-557)||(29241660-29241704)
[»] chr5 (19 HSPs)
chr5 (484-557)||(13661802-13661875)
chr5 (490-550)||(6283562-6283622)
chr5 (490-557)||(10069969-10070036)
chr5 (486-557)||(35132518-35132589)
chr5 (488-557)||(19647777-19647846)
chr5 (487-555)||(13470148-13470216)
chr5 (490-557)||(35504359-35504426)
chr5 (491-557)||(2619676-2619742)
chr5 (488-550)||(10054478-10054540)
chr5 (479-557)||(34650952-34651029)
chr5 (481-557)||(12506287-12506363)
chr5 (487-550)||(21944986-21945050)
chr5 (490-557)||(11958086-11958153)
chr5 (488-557)||(8787337-8787406)
chr5 (488-557)||(39069379-39069447)
chr5 (522-557)||(40057339-40057374)
chr5 (484-557)||(40564523-40564594)
chr5 (488-553)||(4837256-4837320)
chr5 (497-557)||(11846079-11846139)
[»] chr4 (32 HSPs)
chr4 (484-557)||(4089136-4089209)
chr4 (488-557)||(43944505-43944574)
chr4 (487-557)||(15186240-15186310)
chr4 (483-557)||(16536041-16536115)
chr4 (484-557)||(18067998-18068071)
chr4 (488-553)||(43202506-43202571)
chr4 (490-557)||(54897308-54897375)
chr4 (487-557)||(789649-789719)
chr4 (480-557)||(52533904-52533981)
chr4 (489-557)||(4268941-4269009)
chr4 (497-557)||(50619093-50619153)
chr4 (489-553)||(55882683-55882746)
chr4 (490-557)||(32217045-32217112)
chr4 (487-557)||(7768935-7769005)
chr4 (487-557)||(29591186-29591256)
chr4 (487-557)||(47231991-47232061)
chr4 (488-557)||(33108792-33108860)
chr4 (490-557)||(3783620-3783687)
chr4 (490-557)||(24679761-24679827)
chr4 (490-557)||(28755621-28755687)
chr4 (483-557)||(42898865-42898939)
chr4 (488-557)||(12356242-12356311)
chr4 (489-553)||(49915158-49915222)
chr4 (490-557)||(4220195-4220262)
chr4 (490-557)||(32202599-32202666)
chr4 (490-557)||(54054548-54054615)
chr4 (489-531)||(10110147-10110189)
chr4 (491-557)||(19503224-19503289)
chr4 (511-557)||(30154282-30154327)
chr4 (523-557)||(52697085-52697119)
chr4 (513-557)||(54655995-54656039)
chr4 (513-557)||(54945897-54945941)
[»] scaffold0524 (1 HSPs)
scaffold0524 (490-557)||(825-892)
[»] scaffold0003 (1 HSPs)
scaffold0003 (484-557)||(53804-53877)
[»] scaffold0045 (1 HSPs)
scaffold0045 (490-557)||(50548-50615)
[»] chr7 (25 HSPs)
chr7 (490-557)||(24438477-24438544)
chr7 (490-553)||(34606261-34606324)
chr7 (487-557)||(29993606-29993676)
chr7 (491-553)||(47656981-47657043)
chr7 (488-557)||(12218555-12218624)
chr7 (497-558)||(28262038-28262099)
chr7 (488-553)||(34333282-34333347)
chr7 (489-557)||(5239284-5239352)
chr7 (487-557)||(4628563-4628633)
chr7 (488-553)||(18485959-18486024)
chr7 (488-557)||(24798522-24798590)
chr7 (490-557)||(1736980-1737047)
chr7 (511-557)||(30810676-30810722)
chr7 (487-557)||(34546433-34546503)
chr7 (485-557)||(22973593-22973665)
chr7 (489-557)||(23357826-23357894)
chr7 (491-555)||(28587911-28587974)
chr7 (490-557)||(8754704-8754771)
chr7 (490-545)||(47118095-47118150)
chr7 (483-545)||(7689331-7689393)
chr7 (488-557)||(5729344-5729413)
chr7 (497-557)||(11686443-11686503)
chr7 (499-531)||(19434502-19434534)
chr7 (489-557)||(27456232-27456299)
chr7 (489-557)||(47839492-47839559)
[»] scaffold0264 (1 HSPs)
scaffold0264 (488-553)||(22959-23024)
[»] scaffold0014 (1 HSPs)
scaffold0014 (488-557)||(68409-68478)
[»] scaffold0188 (1 HSPs)
scaffold0188 (491-557)||(6229-6295)
[»] scaffold0021 (1 HSPs)
scaffold0021 (488-557)||(116202-116271)
[»] scaffold0002 (1 HSPs)
scaffold0002 (488-557)||(147024-147093)
[»] scaffold1266 (1 HSPs)
scaffold1266 (489-557)||(292-359)
[»] scaffold0674 (1 HSPs)
scaffold0674 (514-557)||(8016-8059)
[»] scaffold0549 (1 HSPs)
scaffold0549 (514-557)||(7312-7355)
[»] scaffold0190 (1 HSPs)
scaffold0190 (490-557)||(14896-14963)
[»] scaffold0050 (1 HSPs)
scaffold0050 (514-557)||(69250-69293)
[»] scaffold1152 (1 HSPs)
scaffold1152 (489-557)||(677-745)


Alignment Details
Target: chr1 (Bit Score: 472; Significance: 0; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 74 - 557
Target Start/End: Original strand, 6769921 - 6770404
Alignment:
74 agcatagggtagcaagcaaggtccggggggtgcagaaatggcagaagactgactgtaagagcacgtggggggtgactggggacattacattacattacgt 173  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
6769921 agcatggggtagcaagcaaggtccggggggtgcagaaatggcagaagactgactgtaagagcacgtggggggtgactggggacattacattacattacgt 6770020  T
174 tgttaaattcaaaggtgaaaagctgaacaacacaagtagtagggtctggtgttgctgcaaccaacgacaataattcccaaacaattaaggaaaattctac 273  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
6770021 tgttaaattcaaaggtgaaaagctgaacaacacaagtagtagggtctggtgttgctgcaaccaacgacaataattcccaaacaattaaggaaaattctac 6770120  T
274 tcatccttaatatggcaacatgagttcaaatctacatgttggttttgtgttttgatttgaaaatatacttaaccataattcatatttataccgtccaaaa 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
6770121 tcatccttaatatggcaacatgagttcaaatctacatgttggttttgtgttttgatttgaaaatatacttaaccataattcatatttataccgtccaaaa 6770220  T
374 atgcattttcagaaccatgttaaagctcttcacaagcaagggatgaaaattggtatcaattaaataaaagggaaatgatagtttaatttgatattaaagt 473  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
6770221 atgcattttcagaaccatgttaaagctcttcacaagcaagggatgaaaattggtatcaattaaataaaagggaaatgatagtttaatttgatattaaagt 6770320  T
474 tcgacaataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
6770321 tcgacaataatttaaagggaatggctaaccggtgcctccggggcactaattaaggatatgaaaaaggaaattatatagtagtta 6770404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 29210412 - 29210480
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||    
29210412 agggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 29210480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 38162850 - 38162917
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| | ||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
38162850 gggaaatgttaaccggtgcctccggggcactggttaagggtatgaaaaagaaaattatatagtagtta 38162917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 18043159 - 18043229
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||||||||||||||||||||||  |||||| ||| |||||| |||||||||||||||||    
18043159 aaagggaaatgctaaccggtgcctccggggcactggttaagggtataaaaaaggaaattatatagtagtta 18043229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 29657770 - 29657838
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||| ||||||||||  |||||||||| |||||| |||||||||||||||||    
29657770 agggaaatgctaaccggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagtta 29657838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 5694321 - 5694388
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||||||||||||||  |||||||||| |||| | |||||||||||||||||    
5694321 gggaaatgctaaccggtgcctccggggcactggttaaggatataaaaagggaaattatatagtagtta 5694388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 30657605 - 30657675
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||||||||||  ||||||||||| ||||| ||||||||||  |||||||||||||||||    
30657605 aaagggaaatgctaaccggtgctcccggggcactagttaagcatatgaaaaaagaaattatatagtagtta 30657675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 47009990 - 47010060
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||| |||||| ||||| |||||  ||||||||||||||||| |||||||||||||||||    
47009990 aaagggaaatgctaatcggtgcatccggagcactggttaaggatatgaaaaaggaaattatatagtagtta 47010060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 51065937 - 51065867
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||||||||| | ||||| ||||  ||||||||||||||||| |||||||||||||||||    
51065937 aaagggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaagtaaattatatagtagtta 51065867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 557
Target Start/End: Complemental strand, 12072254 - 12072181
Alignment:
484 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||| ||||||||||||| |||||||||   ||||||||||||||||| ||||||| |||||||||    
12072254 tttaaaggaaaatgctaaccggtgcccccggggcaccggttaaggatatgaaaaaggaaattatgtagtagtta 12072181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 42770178 - 42770109
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||| ||||||||||  |||| | |||||||||| |||||||||||||||||    
42770178 aagggaaatgctaaccggtgcccccggggcactggttaatggtatgaaaaaggaaattatatagtagtta 42770109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 47532857 - 47532789
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||| |||||| | |||  |||||||||||||||||||||||||||||||||||    
47532857 aagggaaatgctaaccggtgtctccggagtactg-ttaaggatatgaaaaagaaaattatatagtagtta 47532789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 19032002 - 19031934
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||  | |||||| || ||||||||||||||||| |||||||||||||||||    
19032002 agggaaatgctaaccggtgctccgggggcattagttaaggatatgaaaaaggaaattatatagtagtta 19031934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 45431278 - 45431345
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||| || |||| || |||||||||||||||||| |||||||||||||||||    
45431278 agggaaatgctaaccggtgcccccagggc-ctgattaaggatatgaaaaaggaaattatatagtagtta 45431345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 12306914 - 12306977
Alignment:
486 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatat 549  Q
    |||||||||| ||||||||||||||| ||||| ||| |||| |||| |||||||||||||||||    
12306914 taaagggaaatgctaaccggtgcctctggggctctagttaatgatacgaaaaagaaaattatat 12306977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 17333467 - 17333401
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||| ||||  ||||||||||||||||| |||||||||||||||||    
17333467 gggaaatgctaaccggtgcccccggg-cactggttaaggatatgaaaaaggaaattatatagtagtta 17333401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 24178649 - 24178582
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||||| |||| ||||||||||  ||||||||||||||||| |||||||||| ||||||    
24178649 gggaaatgctaaccgatgcccccggggcactggttaaggatatgaaaaaggaaattatataatagtta 24178582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 557
Target Start/End: Complemental strand, 51368975 - 51368904
Alignment:
486 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||| |||||||||| ||||| ||| |||  |||||| |||||||||| |||||||||||||||||    
51368975 taaagggaaatgctaaccggtacctccagggtactggttaagggtatgaaaaaggaaattatatagtagtta 51368904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 15227737 - 15227802
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| |||||||||| || | ||||||||  ||||||||||||||||| |||||||||||||    
15227737 aagggaaatgctaaccggtaccccgggggcactggttaaggatatgaaaaaggaaattatatagta 15227802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 13961211 - 13961278
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||| |||||||||   |||||||||| ||||| ||||||||||||||||||    
13961211 agggaaatgctaaccggtgcccccggggcacgggttaaggatat-aaaaaaaaaattatatagtagtta 13961278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 557
Target Start/End: Original strand, 39497339 - 39497374
Alignment:
522 attaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||||||||||||||||||||||||||    
39497339 attaaggatatgaaaaagaaaattatatagtagtta 39497374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 557
Target Start/End: Complemental strand, 10976099 - 10976021
Alignment:
479 aataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||| ||||| |||| |||||| ||| | ||||||  ||||||||||||||||| | |||||||||||||||    
10976099 aataattaaaaaggaaatgctagccggtgtctctgaggcacttgttaaggatatgaaaaaggagattatatagtagtta 10976021  T

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Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 15282667 - 15282633
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||||||||||||||||||||||||||||    
15282667 ttaaggatatgaaaaagaaaattatatagtagtta 15282633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 19011180 - 19011115
Alignment:
491 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||| ||||||||||| | |||||||||   ||||||||||||||||| |||||||||||||||||    
19011180 ggaaatgctaaccggtgtc-ccggggcacgggttaaggatatgaaaaaggaaattatatagtagtta 19011115  T

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Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 29683193 - 29683263
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatat-gaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||| ||||||||||  |||| |||||  |||||| |||||||||||||||||    
29683193 aagggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagtta 29683263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 9266916 - 9266851
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| | ||||||||| | ||| ||||||  ||||||||||||||||| |||||||||||||    
9266916 aagggaaatgttaaccggtgtccccgcggcactggttaaggatatgaaaaaggaaattatatagta 9266851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 14350465 - 14350396
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||| |||| ||||   |||||| |||||||||| ||||||||| |||||||    
14350465 aagggaaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaaggaaattatattgtagtta 14350396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 557
Target Start/End: Complemental strand, 38702117 - 38702052
Alignment:
492 gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||||||||  ||||||||||  |||||| |||||||||| ||| |||||||||||||    
38702117 gaaatgctaaccggtgctcccggggcactggttaagggtatgaaaaaggaaactatatagtagtta 38702052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 549
Target Start/End: Complemental strand, 48383290 - 48383238
Alignment:
497 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatat 549  Q
    ||||||||||||  ||||||||||  |||||||| ||||||||||||||||||    
48383290 gctaaccggtgctcccggggcactggttaaggatgtgaaaaagaaaattatat 48383238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 3784899 - 3784832
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| || || ||||||| || | |||||  ||||||||||||||||| |||||||||||||||||    
3784899 gggaaatgcaaatcggtgcccccagtgcactggttaaggatatgaaaaaggaaattatatagtagtta 3784832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 28481844 - 28481907
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||| |||||||||||||||  |||| ||  ||||||||||||||||| |||||||| ||||    
28481844 gggaaatgctaaccggtgcctcttgggccctggttaaggatatgaaaaaggaaattatacagta 28481907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 30294567 - 30294500
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||| ||||| | |||| ||| |  ||||||||||||||||| |||||||||||||||||    
30294567 gggaaatgctaatcggtgtccccggagcattggttaaggatatgaaaaaggaaattatatagtagtta 30294500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 3097692 - 3097726
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||||||| |||||||||||||||||    
3097692 ttaaggatatgaaaaaggaaattatatagtagtta 3097726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 488 - 549
Target Start/End: Complemental strand, 28726094 - 28726032
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggat-atgaaaaagaaaattatat 549  Q
    |||||||| ||||||||||||| ||||||||||  |||||||| || |||||| |||||||||    
28726094 aagggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatat 28726032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 50128325 - 50128291
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||||||||||||||||| ||||||||||    
50128325 ttaaggatatgaaaaagaaaattacatagtagtta 50128291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 35985808 - 35985740
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| | ||||||||||| ||||  ||||  |||||||||| |||||| |||||||||||||||||    
35985808 aagggaaatgttaaccggtgcc-ccggatcactgtttaaggatataaaaaaggaaattatatagtagtta 35985740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 48071482 - 48071549
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| |||||||| ||| ||||||| |||  ||||||||||| ||||| |||||||||| ||||||    
48071482 agggaaatgctaaccgatgc-tccggggtactggttaaggatatgtaaaaggaaattatataatagtta 48071549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 477 - 557
Target Start/End: Original strand, 12525706 - 12525786
Alignment:
477 acaataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||||||||| |||||||||||||||||||| |||  |||||| |||||||||| |||||||||||||||||    
12525706 acaataatttaaagggaaatgctaaccggtgcctccggggtactggttaagggtatgaaaaaggaaattatatagtagtta 12525786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 557
Target Start/End: Original strand, 3515759 - 3515833
Alignment:
483 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||| ||||||||||||| || |||||||  |||||| |||||||||| |||||||||||||||||    
3515759 atttaaagggaaatgctaaccggtgcccccagggcactggttaagggtatgaaaaaggaaattatatagtagtta 3515833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 1391365 - 1391297
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||||||||| ||||||| ||| |||||||||||||||||| |||||||||||||||||    
1391365 aagggaaatgctaaccggtgc-tccggggtactgattaaggatatgaaaaaggaaattatatagtagtta 1391297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 7851347 - 7851282
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| ||||||||||||| || |||||||  |||||||||||||||||||||||||||||||    
7851347 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagaaaattatatagta 7851282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 20897946 - 20898015
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||| || |||||||  ||||||||||||||||| |||||||||||||||||    
20897946 aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaaggaaattatatagtagtta 20898015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 23402136 - 23402201
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| |||||| |||||||||||||||||  ||||||||||||||||| |||||||||||||    
23402136 aagggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagta 23402201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 27433486 - 27433559
Alignment:
484 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||    
27433486 tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 27433559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 392096 - 392163
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||    
392096 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 392163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 21878533 - 21878466
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||||||||||||| ||||||   ||||||||||||||||| |||||||||||||||||    
21878533 gggaaatgctaaccggtgcctcccgggcacgggttaaggatatgaaaaaggaaattatatagtagtta 21878466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 23629761 - 23629695
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| | |||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||    
23629761 gggaaatgttaaccgatgcc-ccggggcactgattaaggatatgaaaaagaaaattatatagtagtta 23629695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 557
Target Start/End: Original strand, 2350654 - 2350719
Alignment:
492 gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||||||||  ||||||||||  ||||||||||||||||| |||||||||||||||||    
2350654 gaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatatagtagtta 2350719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 12145303 - 12145236
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| || | |||||  ||||||||||||||||| |||||||||||||||||    
12145303 gggaaatgctaaccggtgcccccagtgcacttgttaaggatatgaaaaaggaaattatatagtagtta 12145236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 29978233 - 29978295
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||| ||||||||||||||||||  ||||| ||||||||||||||||| |||||||||||||    
29978233 gggaaatgctaaccggtgcctccgga-cactagttaaggatatgaaaaaggaaattatatagta 29978295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 550
Target Start/End: Complemental strand, 32929699 - 32929634
Alignment:
485 ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatata 550  Q
    ||||||||||| ||||||||||||| |||||||| |  |||||| |||||||||| ||||||||||    
32929699 ttaaagggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaaggaaattatata 32929634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 34396715 - 34396646
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||| || || |||   ||||||||||||||||| |||||||||||||||||    
34396715 aagggaaatgctaaccggtgcccccaggacacaggttaaggatatgaaaaaggaaattatatagtagtta 34396646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 13529454 - 13529522
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||  |||||| |||||||||  |||||||| |||||||| |||||||||||||||||    
13529454 agggaaatgctaacttgtgccttcggggcactggttaaggatgtgaaaaaggaaattatatagtagtta 13529522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 29451301 - 29451234
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| |||||| |||||||||||| |||   ||||||||||||||||| |||||||||||||||||    
29451301 agggaaatgctaactggtgcctccggg-caccggttaaggatatgaaaaaggaaattatatagtagtta 29451234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 18276803 - 18276734
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| | |||| |||||| || |||||||  ||||||||||||||||| |||||||||||||||||    
18276803 aaagggaaatgttaactggtgcc-cctgggcactggttaaggatatgaaaaaggaaattatatagtagtta 18276734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 4215693 - 4215762
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| | ||||||||||| ||||||||||  |||||  |||||||||| |||||||||| ||||||    
4215693 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagtta 4215762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 14559920 - 14559989
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||||||||||| ||||| ||| ||||| |||||||||||  ||| |||||| ||||||    
14559920 aagggaaatgctaaccggtgccttcggggaactgattaaagatatgaaaaaagaaaatatataatagtta 14559989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 31280320 - 31280388
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||  ||| |||||| ||||||   ||||||||| |||||||||||||||||    
31280320 agggaaatgctaaccggtgctcccgaggcactgattaagagaatgaaaaaggaaattatatagtagtta 31280388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 13417124 - 13417081
Alignment:
514 gggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||    
13417124 gggcactagttaaggatatgaaaaaggaaattatatattagtta 13417081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 34477712 - 34477669
Alignment:
514 gggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||  ||||||||||||||||| |||||||||||||||||    
34477712 gggcactggttaaggatatgaaaaaggaaattatatagtagtta 34477669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 26467277 - 26467243
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||||||| |||||||||||||||||    
26467277 ttaaggatatgaaaaaggaaattatatagtagtta 26467243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 32985369 - 32985312
Alignment:
500 aaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||  ||||||| |  |||||||||| |||||| |||||||||||||||||    
32985369 aaccggtgccctcggggcattggttaaggatataaaaaaggaaattatatagtagtta 32985312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 531
Target Start/End: Complemental strand, 34712312 - 34712271
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggata 531  Q
    |||||| ||||||||||||||||||||||||  |||||||||    
34712312 gggaaatgctaaccggtgcctccggggcactggttaaggata 34712271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 31390010 - 31390079
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
31390010 aagggaaatgctaactggtgcctccggggcactagttaaggatatgaaaaaggaaattatatagtagtta 31390079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 561707 - 561637
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||    
561707 aaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagtta 561637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 30486208 - 30486277
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||| |||||| ||||||||||  ||||||||||||||||| |||||||||||||||||    
30486208 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagtta 30486277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 32361056 - 32360988
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||| ||||||||||  |||||||| ||||||||||||||||||| ||||||    
32361056 agggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagtta 32360988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 34442719 - 34442651
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||| |||||||||   ||||||||||||||||||| |||||||||||||||    
34442719 aagggaaatgctaaccggtgcc-ccggggcacatgttaaggatatgaaaaagaagattatatagtagtta 34442651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 8969591 - 8969526
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||| ||||| |  |||||||| |||||||||||||||||||||||||||||||||||    
8969591 gggaaatgctaaccagtgcccc--gggcactagttaaggatatgaaaaagaaaattatatagtagtta 8969526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 22887749 - 22887817
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| |||||||| ||||||||||||| |  ||||||||||||||||  |||||||||||||||||    
22887749 agggaaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaaagaaattatatagtagtta 22887817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 26891850 - 26891782
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||| ||||| |||| ||||||||||| |||||| |||||||||| ||||||    
26891850 agggaaatgctaaccggtgcccccgggacactgattaaggatataaaaaaggaaattatatattagtta 26891782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 20552931 - 20552994
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||| ||||||||||||| | ||||||||  ||||||||||||||||| |||||||||||||    
20552931 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagta 20552994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 559
Target Start/End: Complemental strand, 22068507 - 22068436
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttatg 559  Q
    |||||||| ||||||  ||||| ||||||||||  |||||||||||||||||  ||||||||||||||||||    
22068507 aagggaaatgctaacaagtgcccccggggcactggttaaggatatgaaaaagggaattatatagtagttatg 22068436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 31438646 - 31438713
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||  ||||||||||  ||||||||||||||||| |||||||| ||||||||    
31438646 gggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatacagtagtta 31438713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 44587902 - 44587969
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| |||||||||   |||||||||| |||||| |||||||||||||||||    
44587902 gggaaatgctaaccggtgcccccggggcaccggttaaggatataaaaaaggaaattatatagtagtta 44587969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 26387252 - 26387183
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||| ||||||||||  | |||  ||||||||||||||||| |||||||||||||||||    
26387252 aagggaaatgctaactggtgcctccgaagtacttgttaaggatatgaaaaaggaaattatatagtagtta 26387183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 485 - 557
Target Start/End: Original strand, 2898067 - 2898138
Alignment:
485 ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||| | ||||||||| | ||||  ||||  |||||||||||||||||||||||||||||||||||    
2898067 ttaaagggaaatgttaaccggtgtc-ccggaacactggttaaggatatgaaaaagaaaattatatagtagtta 2898138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 557
Target Start/End: Original strand, 4381802 - 4381862
Alignment:
497 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||| |||| |||||  |||||| |||||||||| |||||||||||||||||    
4381802 gctaaccggtgcccccggtgcactggttaagggtatgaaaaaggaaattatatagtagtta 4381862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 27856584 - 27856515
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| | ||||||||||| ||||||||||  |||||  |||||||||| |||||||||| ||||||    
27856584 aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagtta 27856515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 38591062 - 38590993
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||| | | ||||||||  ||||| ||||||||||| |||||||| ||||||||    
38591062 aagggaaatgctaaccggtgtccctggggcactggttaagaatatgaaaaaggaaattatacagtagtta 38590993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 6580188 - 6580256
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||| ||||| | ||||||||  |||||| |||||||||| ||| |||||||||||||    
6580188 agggaaatgctaaccagtgccccgggggcactggttaagggtatgaaaaaggaaactatatagtagtta 6580256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 558
Target Start/End: Complemental strand, 16807409 - 16807342
Alignment:
492 gaaaggctaaccggtgcctccggggcactaattaaggatatg-aaaaagaaaattatatagtagttat 558  Q
    |||| ||||||||||||||||| |||| |  |||||||| |  |||||||||||||||||||||||||    
16807409 gaaatgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttat 16807342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 558
Target Start/End: Complemental strand, 16846690 - 16846623
Alignment:
492 gaaaggctaaccggtgcctccggggcactaattaaggatatg-aaaaagaaaattatatagtagttat 558  Q
    |||| ||||||||||||||||| |||| |  |||||||| |  |||||||||||||||||||||||||    
16846690 gaaatgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttat 16846623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 38296178 - 38296240
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||| ||||||||||| ||  ||||||||  |||| ||||||||||||||||||||||||||    
38296178 gggaaatgctaaccggtgtctt-ggggcactggttaaagatatgaaaaagaaaattatatagta 38296240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 43637165 - 43637231
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||| | ||||  ||||||||||||| ||| |||||||||||||||||    
43637165 gggaaatgctaaccggtgcc-ccgagacactggttaaggatatgaataaggaaattatatagtagtta 43637231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 5881250 - 5881284
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||||||| |||||||||||||||||    
5881250 ttaaggatatgaaaaaggaaattatatagtagtta 5881284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 5093699 - 5093658
Alignment:
516 gcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||||||| |||||| ||||||||||    
5093699 gcactagttaaggatatgaaaaaggaaattaaatagtagtta 5093658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 32860100 - 32860165
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| | ||||||||||| | |||||||   |||||||||| |||||| |||||||||||||    
32860100 aagggaaatgttaaccggtgccccgggggcacgggttaaggatataaaaaaggaaattatatagta 32860165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 35851966 - 35851925
Alignment:
479 aataatttaaagggaaaggctaaccggtgcctccggggcact 520  Q
    |||||||| |||||||| ||||||||||||| ||||||||||    
35851966 aataattttaagggaaatgctaaccggtgcccccggggcact 35851925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 7e-20; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 168463 - 168533
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||    
168463 aaagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 168533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 27988687 - 27988618
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||    
27988687 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagtta 27988618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 28045989 - 28045920
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||    
28045989 aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagtta 28045920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 43119216 - 43119284
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| |||||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||||    
43119216 agggaaatgctaaccggtgccctcggggcactgattaaagatatgaaaaagaaaattatatagtagtta 43119284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 557
Target Start/End: Original strand, 13643005 - 13643079
Alignment:
483 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||| ||||||||||||| ||||||||||  ||||||||| ||||||| |||||||||||||||||    
13643005 atttaaaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagtta 13643079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 557
Target Start/End: Original strand, 13743430 - 13743504
Alignment:
483 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||| ||||||||||||| ||||||||||  ||||||||| ||||||| |||||||||||||||||    
13743430 atttaaaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagtta 13743504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 4537932 - 4537863
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||||||||||||||  |||||||||| ||| || |||||||||||||||||    
4537932 aagggaaatgctaaccggtgcctccggggcactggttaaggatataaaataggaaattatatagtagtta 4537863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 4648193 - 4648261
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||| | |||||||||| |||||||||||||||||| |||||||||||||||||    
4648193 aagggaaatgctaaccggtgtc-ccggggcactgattaaggatatgaaaaaggaaattatatagtagtta 4648261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 16394247 - 16394180
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||||||||  |||||||| ||||||||||||||||||| ||||||    
16394247 gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagtta 16394180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 30675758 - 30675691
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||    
30675758 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 30675691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 557
Target Start/End: Complemental strand, 29444317 - 29444259
Alignment:
499 taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||  |||||||||| |||||||||||||||||| |||||||||||||||||    
29444317 taaccggtgctcccggggcactgattaaggatatgaaaaaggaaattatatagtagtta 29444259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 10618016 - 10618085
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||| |||||||||||||||  ||||||   |||||||||||||||||||||||||||||||||||    
10618016 aaggaaaatgctaaccggtgcctctagggcacaggttaaggatatgaaaaagaaaattatatagtagtta 10618085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 557
Target Start/End: Complemental strand, 20831737 - 20831672
Alignment:
492 gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||||||||| ||||| ||||  ||||||||||||||||| |||||||||||||||||    
20831737 gaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagtta 20831672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 33357317 - 33357248
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||| |||||| |||| |||||  ||||||||||||||||| |||||||||||||||||    
33357317 aagggaaatgctaactggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagtta 33357248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 11112638 - 11112706
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| |||||| ||||| |||||| ||||  ||||||||||||||||| |||||||||||||||||    
11112638 agggaaatgctaactggtgcatccgggacactggttaaggatatgaaaaaggaaattatatagtagtta 11112706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 558
Target Start/End: Complemental strand, 36923841 - 36923781
Alignment:
498 ctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttat 558  Q
    ||||||| |||||||| |||||| |||||||||||||||||| |||||||||| |||||||    
36923841 ctaaccgctgcctccgaggcactgattaaggatatgaaaaaggaaattatataatagttat 36923781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 12652630 - 12652697
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| | || |||||  ||||||||||||||||| |||||||||||||||||    
12652630 gggaaatgctaaccggtgcccctggagcactggttaaggatatgaaaaaggaaattatatagtagtta 12652697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 34228682 - 34228745
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||| ||||||||||||| | ||||||||  ||||||||||||||||| |||||||||||||    
34228682 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagta 34228745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 9063239 - 9063171
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||| | |||| |||||  ||||||||||||||||| |||||||||||||||||    
9063239 aagggaaatgctaaccggtgtc-ccggagcactggttaaggatatgaaaaaggaaattatatagtagtta 9063171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 557
Target Start/End: Original strand, 16785077 - 16785153
Alignment:
480 ataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| |||||||| |||||||||||| ||| |||||||  ||||||||||||||||  ||||||||||| |||||    
16785077 ataattttaagggaaatgctaaccggtgc-tccagggcactggttaaggatatgaaaaaagaaattatatagcagtta 16785153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 7304671 - 7304637
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||||||||||||||||||||||||||||    
7304671 ttaaggatatgaaaaagaaaattatatagtagtta 7304637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 16888728 - 16888663
Alignment:
491 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||| ||||||||||||| ||||| |||   ||||||||||||||||| |||||||||||||||||    
16888728 ggaaatgctaaccggtgcccccggg-cacaggttaaggatatgaaaaaggaaattatatagtagtta 16888663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 557
Target Start/End: Complemental strand, 42035154 - 42035100
Alignment:
503 cggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| |||| |||||  ||||||||||||||||| |||||||||||||||||    
42035154 cggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagtta 42035100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 9278210 - 9278279
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||| |||||||| ||| ||||  |||| |||||||||||| |||||||||| ||||||    
9278210 aagggaaatgctaactggtgcctcagggacactcgttaaagatatgaaaaaggaaattatataatagtta 9278279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 16890643 - 16890599
Alignment:
513 ggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||    
16890643 ggggcaccagttaaggatatgaaaaaggaaattatatagtagtta 16890599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 557
Target Start/End: Original strand, 32113915 - 32113975
Alignment:
497 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||| |||||| | | |  ||||||||||||||||| |||||||||||||||||    
32113915 gctaaccggtgtctccggagtattggttaaggatatgaaaaaggaaattatatagtagtta 32113975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 557
Target Start/End: Original strand, 36730471 - 36730511
Alignment:
517 cactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
36730471 cactagttaaggatatgaaaaaggaaattatatagtagtta 36730511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 2805446 - 2805379
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| | ||||| ||||| ||||| ||||  ||||||||||||||||| |||||||||| ||||||    
2805446 gggaaatgttaaccagtgcccccgggacactggttaaggatatgaaaaaggaaattatataatagtta 2805379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 37373206 - 37373272
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||  ||||  ||||||||||||||||| |||||||||| ||||||    
37373206 gggaaatgctaaccggtgcccccgga-cactggttaaggatatgaaaaaggaaattatataatagtta 37373272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 9537977 - 9537943
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||||||| |||||||||||||||||    
9537977 ttaaggatatgaaaaaggaaattatatagtagtta 9537943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 557
Target Start/End: Original strand, 21595848 - 21595913
Alignment:
491 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||| ||||||||||||| ||||| ||||  |||||| |||||||||| ||||||||||| |||||    
21595848 ggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatataggagtta 21595913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 40831310 - 40831344
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||||||||||||||||||||||||||    
40831310 ttaaagatatgaaaaagaaaattatatagtagtta 40831344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 550
Target Start/End: Complemental strand, 39751658 - 39751597
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggat-atgaaaaagaaaattatata 550  Q
    |||||| ||||||||||||| ||||||||||  |||||||| || |||| ||||||||||||    
39751658 gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaggaaaattatata 39751597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 3930419 - 3930352
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||| ||||||| ||||| ||||| ||||  |||||||| || |||||||||||||||||    
3930419 agggaaatgctaatcggtgcccccggg-cactagttaataatatgaaagaggaaattatatagtagtta 3930352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 7e-20; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 18014669 - 18014739
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| |||||| |||||| |||||||||| |||||||||||||||||| |||||||||||||||||    
18014669 aaagggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaagtaaattatatagtagtta 18014739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 40362768 - 40362699
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||| |||||||||||||||| |||||||||||||||||  |||||||||||||||||    
40362768 aagggaaatgctaacccgtgcctccggggcactgattaaggatatgaaaaaagaaattatatagtagtta 40362699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 272219 - 272287
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||    
272219 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagtta 272287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 557
Target Start/End: Original strand, 52520677 - 52520748
Alignment:
486 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||    
52520677 taaagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 52520748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 46352631 - 46352701
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||| ||||||||    
46352631 aaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatacagtagtta 46352701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 41304004 - 41304068
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    ||||||| |||||||||||||||||||||| |  ||||||||||||||||| |||||||||||||    
41304004 agggaaatgctaaccggtgcctccggggcagtggttaaggatatgaaaaaggaaattatatagta 41304068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 49893330 - 49893398
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||||| ||||||    
49893330 agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatataatagtta 49893398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 4168183 - 4168250
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||||||||||||||||| |||  |||||||||| |||||| |||||||||||||||||    
4168183 gggaaatgctaaccggtgcctccggggaactggttaaggatataaaaaaggaaattatatagtagtta 4168250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 20923992 - 20924059
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||||||||| |||||||||||  |||||| |||||||||| |||||||||||||||||    
20923992 gggaaatgctaaccggtgcttccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 20924059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 39074419 - 39074486
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||    
39074419 gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 39074486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 43786871 - 43786938
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||||||||||||||  |||| | |||||||||| |||||||||||||||||    
43786871 gggaaatgctaaccggtgcctccggggcactggttaatggtatgaaaaaggaaattatatagtagtta 43786938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 858587 - 858656
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| || |||||||||| || | |||||| ||||||||||||||||| |||||||||||||||||    
858587 aagggaaatgcaaaccggtgcccccagtgcactagttaaggatatgaaaaaggaaattatatagtagtta 858656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 48725271 - 48725334
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||| ||||||||||||| | ||||||||  ||||||||||||||||| |||||||||||||    
48725271 gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagta 48725334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 52246582 - 52246649
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||| |||||||||||||||||  ||||||||||||||||  |||||||||||| ||||    
52246582 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaatgaaattatatagttgtta 52246649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 11308398 - 11308329
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||||||||  |||||| |||| ||||||||| |||||||| |||||||||| ||||||    
11308398 aagggaaatgctaaccggtgtttccgggacactgattaaggatgtgaaaaaggaaattatataatagtta 11308329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 13159895 - 13159964
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||  | ||||  ||| ||||||||||||||||| |||||||||||||||||    
13159895 aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagtta 13159964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 558
Target Start/End: Original strand, 22248910 - 22248954
Alignment:
514 gggcactaattaaggatatgaaaaagaaaattatatagtagttat 558  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||    
22248910 gggcactagttaaggatatgaaaaaggaaattatatagtagttat 22248954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 49529434 - 49529390
Alignment:
511 ccggggcactaattaaggatatgaaaaagaaaattatatagtagt 555  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||    
49529434 ccggggcactgattaaggatatgaaaaagaaaattatatactagt 49529390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 557
Target Start/End: Complemental strand, 50395741 - 50395681
Alignment:
497 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||| ||||| ||||  ||| |||||||||||||||||||||| ||||||||    
50395741 gctaaccggtgcccccgggacactggttagggatatgaaaaagaaaattatacagtagtta 50395681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 558
Target Start/End: Complemental strand, 51819061 - 51818993
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttat 558  Q
    |||||| |||||| | |||||| |||||||| ||||||||||  |||||||||||||| ||||||||||    
51819061 gggaaatgctaactgatgcctctggggcactgattaaggatactaaaaagaaaattatttagtagttat 51818993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 557
Target Start/End: Complemental strand, 53490019 - 53489943
Alignment:
483 atttaaagggaaaggctaaccggtgcctcc--ggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||| ||||| ||||||| ||  ||||||||  |||||| |||||||||| |||||||||||||||||    
53490019 atttaatgggaaatgctaatcggtgcccccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 53489943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 557
Target Start/End: Complemental strand, 41554118 - 41554059
Alignment:
497 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||| |||| |||||  ||||||||||||||||| |||||||||||||||||    
41554118 gctaactggtgcc-ccggtgcactggttaaggatatgaaaaaggaaattatatagtagtta 41554059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 10617469 - 10617403
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| | ||||||||||| ||||  |||| ||||||||||| |||||| |||||||||||||||||    
10617469 gggaaatgttaaccggtgcccccgga-cactgattaaggatataaaaaaggaaattatatagtagtta 10617403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 557
Target Start/End: Complemental strand, 42964426 - 42964368
Alignment:
499 taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||| |||||||||||  ||||||||||||||||  ||||| |||||||||||    
42964426 taactggtgcttccggggcactggttaaggatatgaaaaatgaaattttatagtagtta 42964368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 557
Target Start/End: Complemental strand, 43269916 - 43269858
Alignment:
499 taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||||| ||| |||||  ||||||||||||||| | |||||| ||||||||||    
43269916 taaccggtgccttcggagcactggttaaggatatgaaaagggaaattacatagtagtta 43269858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 52718200 - 52718234
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||||||||| |||||||||||||||||    
52718200 ttaaggatatgaaaaaggaaattatatagtagtta 52718234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 550
Target Start/End: Original strand, 2362801 - 2362861
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatata 550  Q
    |||||| ||||||||||||  |||| ||| |  ||||||||||||||||| ||||||||||    
2362801 gggaaatgctaaccggtgctcccggtgcaatggttaaggatatgaaaaaggaaattatata 2362861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 2391630 - 2391674
Alignment:
513 ggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||  ||||||||| ||||||| |||||||||||||||||    
2391630 ggggcactggttaaggataagaaaaaggaaattatatagtagtta 2391674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 2393391 - 2393435
Alignment:
513 ggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||  ||||||||| ||||||| |||||||||||||||||    
2393391 ggggcactggttaaggataagaaaaaggaaattatatagtagtta 2393435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 29241660 - 29241704
Alignment:
513 ggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| | ||||||||||||||| | |||||||||||||||||    
29241660 ggggcaccagttaaggatatgaaaatggaaattatatagtagtta 29241704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 13661802 - 13661875
Alignment:
484 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||||| ||||||||||||| |||| |||||  ||||||||||||||||| |||||||||||||||||    
13661802 tttaaagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagtta 13661875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 550
Target Start/End: Original strand, 6283562 - 6283622
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatata 550  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
6283562 gggaaatgctaaccggtgcctccggggcactagttaaagatatgaaaaagaaaattatata 6283622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 10069969 - 10070036
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||||    
10069969 gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagtta 10070036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 557
Target Start/End: Original strand, 35132518 - 35132589
Alignment:
486 taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||| ||||||||||||| ||||| ||||  ||||||||||||||||| |||||||||||||||||    
35132518 taaagggaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagtta 35132589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 19647846 - 19647777
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||| ||||||||||  ||||||||||||  ||||||||||||||||| |||||||||||||||||    
19647846 aaggaaaatgctaaccggtatctccggggcactggttaaggatatgaaaaaggaaattatatagtagtta 19647777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 487 - 555
Target Start/End: Original strand, 13470148 - 13470216
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagt 555  Q
    ||||||||| ||||||||||||||  ||||||||  ||||||||||||||||| |||| ||||||||||    
13470148 aaagggaaatgctaaccggtgcctatggggcactggttaaggatatgaaaaaggaaataatatagtagt 13470216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 35504426 - 35504359
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||| ||||  |||||| |||||||||| |||||||||||||||||    
35504426 gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagtta 35504359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 2619742 - 2619676
Alignment:
491 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||| |||||| |||| ||||||| ||||  ||||||||||||||||||||||||| |||||||||    
2619742 ggaaatgctaactggtgtctccgggacacttgttaaggatatgaaaaagaaaattatttagtagtta 2619676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 488 - 550
Target Start/End: Complemental strand, 10054540 - 10054478
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatata 550  Q
    |||||||| ||||||||||||| ||||||||||  |||||| |||||||||| ||||||||||    
10054540 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatata 10054478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 557
Target Start/End: Complemental strand, 34651029 - 34650952
Alignment:
479 aataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||  |||||| ||||||||||||| ||||| ||||  |||||| |||||||||| |||||||||||||||||    
34651029 aataatttattgggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatatagtagtta 34650952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 557
Target Start/End: Original strand, 12506287 - 12506363
Alignment:
481 taatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| | |||||| ||||||||||||||| || |||||  |||||  |||||||||| |||||||||||||||||    
12506287 taattttatgggaaatgctaaccggtgcctctggagcactcgttaagagtatgaaaaaggaaattatatagtagtta 12506363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 21945050 - 21944986
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggat-atgaaaaagaaaattatata 550  Q
    ||||||||| ||||||||||||||||||||||||  |||||||| || |||| ||||||||||||    
21945050 aaagggaaatgctaaccggtgcctccggggcactggttaaggataataaaaaggaaaattatata 21944986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 11958153 - 11958086
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| |||||||||   |||| ||||| |||||| |||||||||||||||||    
11958153 gggaaatgctaaccggtgcccccggggcacaggttaaagatataaaaaaggaaattatatagtagtta 11958086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 8787337 - 8787406
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||| | |||||||| |  |||||| |||||||||  |||||||||||||||||    
8787337 aagggaaatgctaaccggtgtccccggggcattggttaagggtatgaaaaatgaaattatatagtagtta 8787406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 39069379 - 39069447
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||||||||| ||| |||||||  |||||| |||| ||||| |||||||||||||||||    
39069379 aagggaaatgctaaccggtgcttccagggcactggttaagggtatg-aaaaggaaattatatagtagtta 39069447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 557
Target Start/End: Original strand, 40057339 - 40057374
Alignment:
522 attaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||||||||||| |||||||||||||||||    
40057339 attaaggatatgaaaaaggaaattatatagtagtta 40057374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 557
Target Start/End: Complemental strand, 40564594 - 40564523
Alignment:
484 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||| |||||||||||  |||||| ||   ||||||||| |||||||| |||||||||||||||||    
40564594 tttatagggaaatgctaaccggtg--tccgggacatcgattaaggatttgaaaaaggaaattatatagtagtta 40564523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 4837256 - 4837320
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| | ||||||||||| |||||||||   ||||| ||||||||||| |||||||||||||    
4837256 aagggaaatgttaaccggtgcc-ccggggcaccggttaagaatatgaaaaaggaaattatatagta 4837320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 497 - 557
Target Start/End: Original strand, 11846079 - 11846139
Alignment:
497 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||| ||||| | ||||| |||||  ||||||||| |||||| |||||||||||||||||    
11846079 gctaagcggtgtccccgggacactagctaaggatataaaaaaggaaattatatagtagtta 11846139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 3e-19; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 4089136 - 4089209
Alignment:
484 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||| ||||||||||||| | |||||||| ||||||| ||||||||||||||||||||||||||||    
4089136 tttatagggaaatgctaaccggtgcccctggggcactgattaagggtatgaaaaagaaaattatatagtagtta 4089209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 43944505 - 43944574
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||||||    
43944505 aagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 43944574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 15186240 - 15186310
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||    
15186240 aaagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 15186310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 557
Target Start/End: Original strand, 16536041 - 16536115
Alignment:
483 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| |||||||| ||||||||||||| |||||||||  ||||||| |||||||||| |||||||||||||||||    
16536041 attttaagggaaatgctaaccggtgcccccggggcacggattaagggtatgaaaaaggaaattatatagtagtta 16536115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 557
Target Start/End: Complemental strand, 18068071 - 18067998
Alignment:
484 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||    
18068071 tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 18067998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 43202571 - 43202506
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| ||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||    
43202571 aagggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaattatatagta 43202506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 54897308 - 54897375
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||||||||  |||||||||||| |||| |||||||||||||||||    
54897308 gggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaaggaaattatatagtagtta 54897375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 789719 - 789649
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||||||||||| |||||||||   |||||| |||||||||| |||||||||||||||||    
789719 aaagggaaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaaggaaattatatagtagtta 789649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 557
Target Start/End: Complemental strand, 52533981 - 52533904
Alignment:
480 ataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||||||| | |||||||||||||| || ||||  ||||| ||||||||||| |||||||||||||||||    
52533981 ataaattaaagggaaatgttaaccggtgcctccaggacactggttaagaatatgaaaaaggaaattatatagtagtta 52533904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 4269009 - 4268941
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||||| ||||||||||  |||||| |||||||||| ||| |||||||||||||    
4269009 agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaactatatagtagtta 4268941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 497 - 557
Target Start/End: Original strand, 50619093 - 50619153
Alignment:
497 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||  |||||||||| |||||| |||||||||||||||||||||||||||||    
50619093 gctaactggtgctcccggggcactgattaagaatatgaaaaagaaaattatatagtagtta 50619153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 55882683 - 55882746
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    ||||||| ||||||||||| ||||||||||||  |||||||||||||||| ||||||||||||||    
55882683 agggaaatgctaaccggtgtctccggggcactcgttaaggatatgaaaaa-aaaattatatagta 55882746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 32217045 - 32217112
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||| |||||| ||||||||||  |||||||||| |||||| |||||||||||||||||    
32217045 gggaaatgctaactggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagtta 32217112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 7768935 - 7769005
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||| |||| || ||||||||||  |||||| |||||||||| |||||||||||||||||    
7768935 aaagggaaatgctaatcggtacccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 7769005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 29591186 - 29591256
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| |||||| |||||| ||||||||||  ||||| ||||||| ||| |||||||||||||||||    
29591186 aaagggaaatgctaactggtgcccccggggcactggttaagaatatgaataaggaaattatatagtagtta 29591256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 47232061 - 47231991
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| ||||||||||||| |||| |||||  |||||||| |||||||| |||||||||| ||||||    
47232061 aaagggaaatgctaaccggtgcccccggagcactggttaaggatgtgaaaaaggaaattatataatagtta 47231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 33108860 - 33108792
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| | ||||||||||||||||||||||  |||| |||||||||||| |||||||||| ||||||    
33108860 aagggaaatgttaaccggtgcctccggggcactggttaa-gatatgaaaaaggaaattatataatagtta 33108792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 3783687 - 3783620
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||||||||||||||||||||   ||||  ||||||||||  |||||||||||||||||    
3783687 gggaaatgctaaccggtgcctccggggcaccggttaaacatatgaaaaatgaaattatatagtagtta 3783620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 24679827 - 24679761
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||| ||| ||||||||  ||||||||||||||||  |||||||||||||||||    
24679827 gggaaatgctaaccggtgtctc-ggggcactggttaaggatatgaaaaaagaaattatatagtagtta 24679761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 28755621 - 28755687
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||| | || |||||||  ||||||||||||||||| |||||||||||||||||    
28755621 gggaaatgctaaccggtgtc-ccagggcactggttaaggatatgaaaaaggaaattatatagtagtta 28755687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 557
Target Start/End: Complemental strand, 42898939 - 42898865
Alignment:
483 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||| ||||||| | ||| |||||| ||| |||||||  |||||||||| |||||| |||||||||||||||||    
42898939 atttatagggaaatgttaatcggtgcttccagggcactggttaaggatataaaaaaggaaattatatagtagtta 42898865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 12356242 - 12356311
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||| | | |  |||  ||||||||||||||||| |||||||||||||||||    
12356242 aagggaaatgctaaccggtgcccctgagatactggttaaggatatgaaaaaggaaattatatagtagtta 12356311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 49915158 - 49915222
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    ||||||| || |||||| ||| | || ||||| ||||||||||||||||||||| ||||||||||    
49915158 agggaaatgcaaaccggcgcccctggtgcactgattaaggatatgaaaaagaaatttatatagta 49915222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 4220195 - 4220262
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| | |||||| ||||| ||||| ||   ||||||||||||||||| |||||||||||||||||    
4220195 gggaaatgataaccgatgccttcggggtacgggttaaggatatgaaaaaggaaattatatagtagtta 4220262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 32202666 - 32202599
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| | ||||||||| | |||||||||   |||||||||| |||||| |||||||||||||||||    
32202666 gggaaatgttaaccggtgtccccggggcacgggttaaggatataaaaaaggaaattatatagtagtta 32202599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 54054548 - 54054615
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| | |||||||   ||||||||||||||||  |||||||||| ||||||    
54054548 gggaaatgctaaccggtgccccgggggcaccggttaaggatatgaaaaaagaaattatataatagtta 54054615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 531
Target Start/End: Complemental strand, 10110189 - 10110147
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggata 531  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||    
10110189 agggaaatgctaaccggtgcctccgggacactgattaaggata 10110147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 19503289 - 19503224
Alignment:
491 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||| |||||||||||| ||| ||| |||  ||||||||||||||||| |||||||||| ||||||    
19503289 ggaaatgctaaccggtgc-tcccgggtactggttaaggatatgaaaaaggaaattatatactagtta 19503224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 557
Target Start/End: Complemental strand, 30154327 - 30154282
Alignment:
511 ccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||| ||||| ||||||||||| |||||||||||||||||    
30154327 ccggggcactagttaag-atatgaaaaaggaaattatatagtagtta 30154282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 52697085 - 52697119
Alignment:
523 ttaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||||||||||| ||||||||||||||||||    
52697085 ttaaggatatgaaaaacaaaattatatagtagtta 52697119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 54656039 - 54655995
Alignment:
513 ggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||  |||||||||| |||||| |||||||||||||||||    
54656039 ggggcactggttaaggatataaaaaaggaaattatatagtagtta 54655995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 54945941 - 54945897
Alignment:
513 ggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||  ||||||||||||||||| ||||||||||| |||||    
54945941 ggggcactggttaaggatatgaaaaaggaaattatatagcagtta 54945897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 825 - 892
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||| ||||||| ||||| |||||| |||||||||||||||||||||||||||||||||||    
825 gggaaatgctagccggtgcttccggagcactagttaaggatatgaaaaagaaaattatatagtagtta 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 557
Target Start/End: Complemental strand, 53877 - 53804
Alignment:
484 tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||||||    
53877 tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta 53804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 50548 - 50615
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| | ||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||    
50548 gggaaatgttaaccggtgcctccggggcactggttaaagatatgaaaaaggaaattatatagtagtta 50615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 24438477 - 24438544
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||||| ||||||||||| |||||| |||||||||| ||| |||||||||||||    
24438477 gggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaactatatagtagtta 24438544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 34606261 - 34606324
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||| |||||| |||||||||||||||||  ||||||||||||||||| |||||||||||||    
34606261 gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagta 34606324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 29993676 - 29993606
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| |||||| |||||| |||||||||   ||||||||||||||||| |||||||||||||||||    
29993676 aaagggaaatgctaacgggtgcccccggggcaccggttaaggatatgaaaaaggaaattatatagtagtta 29993606  T

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Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 553
Target Start/End: Original strand, 47656981 - 47657043
Alignment:
491 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    ||||| |||||||||||| || ||||||||  |||||||||||||||||||||||||||||||    
47656981 ggaaatgctaaccggtgcttcgggggcactggttaaggatatgaaaaagaaaattatatagta 47657043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 12218624 - 12218555
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||| ||||||||||   |||| ||||||||||| |||||||||||||||||    
12218624 aagggaaatgctaaccggtgcccccggggcactggataagtatatgaaaaaggaaattatatagtagtta 12218555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 558
Target Start/End: Original strand, 28262038 - 28262099
Alignment:
497 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttat 558  Q
    ||||||||||||||||||| |||   ||||||||||||||||| ||||||||||||||||||    
28262038 gctaaccggtgcctccgggtcaccggttaaggatatgaaaaaggaaattatatagtagttat 28262099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 34333282 - 34333347
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| ||||||||||||| ||||||||||  |||||| |||||||||| |||||||||||||    
34333282 aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagta 34333347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 5239284 - 5239352
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| |||||||||||||||||| |||||  |||| | |||||||||| |||||||||||||||||    
5239284 agggaaatgctaaccggtgcctccggagcactggttaatggtatgaaaaaggaaattatatagtagtta 5239352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 4628563 - 4628633
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| |||||||| |||| | |||||||   ||||||||||||||||| |||||||||||||||||    
4628563 aaagggaaatgctaaccgatgcccctggggcaccggttaaggatatgaaaaaggaaattatatagtagtta 4628633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 18485959 - 18486024
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| ||||||||||||| ||||||||||  ||||||||||  ||||| |||||||||||||    
18485959 aagggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaaggaaattatatagta 18486024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 24798590 - 24798522
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||| ||||| ||||  || |||||||||||||| |||||||||||||||||    
24798590 aagggaaatgctaaccggtgcccccggg-cacttgttgaggatatgaaaaaggaaattatatagtagtta 24798522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 1736980 - 1737047
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||||||||| || ||||||||  ||||||||||||||||  |||||||||| ||||||    
1736980 gggaaatgctaaccggtgcttctggggcactggttaaggatatgaaaaatgaaattatataatagtta 1737047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 511 - 557
Target Start/End: Original strand, 30810676 - 30810722
Alignment:
511 ccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||||  ||||||||||||||||| |||||||||||||||||    
30810676 ccggggcactggttaaggatatgaaaaaggaaattatatagtagtta 30810722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 34546503 - 34546433
Alignment:
487 aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||||| |||||||| |||| ||| || ||   ||||||||||||||||| |||||||||||||||||    
34546503 aaagggaaatgctaaccgatgcccccgaggtaccggttaaggatatgaaaaaggaaattatatagtagtta 34546433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 557
Target Start/End: Original strand, 22973593 - 22973665
Alignment:
485 ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||| ||||||  ||||||||||||||||  |||| ||||| |||||  |||||||||||||||||    
22973593 ttaaagagaaatgctaactagtgcctccggggcactggttaatgatataaaaaaagaaattatatagtagtta 22973665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 23357894 - 23357826
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| | |||||||| |||| || | |||  ||||||||||||||||||||||| |||||||||||    
23357894 agggaaatgttaaccggttcctctggagtactcgttaaggatatgaaaaagaaaattgtatagtagtta 23357826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 491 - 555
Target Start/End: Original strand, 28587911 - 28587974
Alignment:
491 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagt 555  Q
    ||||| ||||||||||||| ||||  ||||  ||||||||||||||||| |||||||||||||||    
28587911 ggaaatgctaaccggtgcccccgga-cactggttaaggatatgaaaaaggaaattatatagtagt 28587974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 8754771 - 8754704
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| |||||||||||||   || |||||  ||||||||||||||||  |||||||||||||||||    
8754771 gggaaatgctaaccggtgccctgggagcactggttaaggatatgaaaaatgaaattatatagtagtta 8754704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 47118150 - 47118095
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaatt 545  Q
    |||||| |||||| |||||||||||||||||  |||| |||||||||||| |||||    
47118150 gggaaatgctaactggtgcctccggggcactggttaaagatatgaaaaaggaaatt 47118095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 7689393 - 7689331
Alignment:
483 atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaatt 545  Q
    ||||||||||||| | ||||||||| ||| ||| |||| ||||||||||| |||||| |||||    
7689393 atttaaagggaaatgttaaccggtgtctctgggacactgattaaggatataaaaaaggaaatt 7689331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 5729344 - 5729413
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| | |||||||||   |||| |||||  ||||||||||||||||| |||||||||| ||||||    
5729344 aagggaaatgttaaccggtgttcccggagcactggttaaggatatgaaaaaggaaattatataatagtta 5729413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 497 - 557
Target Start/End: Complemental strand, 11686503 - 11686443
Alignment:
497 gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||| ||||||  |||  |||||||||| |||||| |||||||||||||||||    
11686503 gctaactggtgcttccgggatactggttaaggatataaaaaaggaaattatatagtagtta 11686443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 531
Target Start/End: Original strand, 19434502 - 19434534
Alignment:
499 taaccggtgcctccggggcactaattaaggata 531  Q
    |||||||||||||||||||||| ||||||||||    
19434502 taaccggtgcctccggggcactgattaaggata 19434534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 27456299 - 27456232
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| |||||| |||||| ||||| ||||  ||||||||||| ||||  |||||||||||||||||    
27456299 agggaaatgctaactggtgcccccggg-cactggttaaggatatggaaaaagaaattatatagtagtta 27456232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 47839492 - 47839559
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||||||||| | |||||| |||  ||||||||||||||||| || ||||||| ||||||    
47839492 agggaaatgctaaccggtgtc-ccggggtactggttaaggatatgaaaaaggaatttatataatagtta 47839559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 22959 - 23024
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta 553  Q
    |||||||| ||||||||||||| |||| |||||  ||||||||||||||||| |||||||||||||    
22959 aagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagta 23024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 68478 - 68409
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| |||||| |||||| ||||||||||  ||||||||||||||||  |||||||||||||||||    
68478 aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaatgaaattatatagtagtta 68409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 6295 - 6229
Alignment:
491 ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||| ||||||||||||| | ||||||||  ||||||||||||||||| ||| |||||||||||||    
6295 ggaaatgctaaccggtgcccctggggcactggttaaggatatgaaaaaggaaactatatagtagtta 6229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 116202 - 116271
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||| ||| ||||||||||||| |||||||||   |||| |||||||||||| |||||||||||||||||    
116202 aaggaaaatgctaaccggtgcccccggggcacaggttaaagatatgaaaaaggaaattatatagtagtta 116271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 147093 - 147024
Alignment:
488 aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||| ||||||||||||  | ||||  ||| ||||||||||||||||| |||||||||||||||||    
147093 aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagtta 147024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 292 - 359
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||  |||||||||||| || |||||||  ||||| |||||||||||||||||||||| ||||||    
292 agggaaatcctaaccggtgcc-ccagggcactggttaagcatatgaaaaagaaaattatataatagtta 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 8059 - 8016
Alignment:
514 gggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||  ||||||||||||||||| |||||||||||||||||    
8059 gggcactggttaaggatatgaaaaaggaaattatatagtagtta 8016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Original strand, 7312 - 7355
Alignment:
514 gggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||  ||||||||||||||||| |||||||||||||||||    
7312 gggcactggttaaggatatgaaaaaggaaattatatagtagtta 7355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 14896 - 14963
Alignment:
490 gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||| ||||||||||| | ||||||||||  |||| ||||| |||||  |||||||||||||||||    
14896 gggaaatgctaaccggtgtccccggggcactggttaaagatataaaaaaagaaattatatagtagtta 14963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Original strand, 69250 - 69293
Alignment:
514 gggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    |||||||  ||||||||||||||||| |||||||||||||||||    
69250 gggcactcgttaaggatatgaaaaagtaaattatatagtagtta 69293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 677 - 745
Alignment:
489 agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta 557  Q
    ||||||| ||||| ||||||| || | ||||   |||| |||||||||||| |||||||||||||||||    
677 agggaaatgctaatcggtgcccccagagcacgggttaaagatatgaaaaaggaaattatatagtagtta 745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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