View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1139_low_135 (Length: 320)
Name: NF1139_low_135
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1139_low_135 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 95 - 320
Target Start/End: Original strand, 32258524 - 32258749
Alignment:
| Q |
95 |
caaaagacatgaatgtttcagagagagtagttcatcatgggaaagaacaccgttgttgatgacgttcagaacaaacaagttatattcaaggactatgtta |
194 |
Q |
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| T |
32258524 |
caaaagacatgaatgtttcagagagagtagttcatcatgggaaagaacaccgttgttgatgacgttcagaacaaacaagttatattcaaggactatgtta |
32258623 |
T |
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| Q |
195 |
atggcaacctacaagaagatgatttatacataagtacaagtaagataaagcttcaggttcctcaaggatcaaatgctgttttggtgaagaatttgtacct |
294 |
Q |
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| T |
32258624 |
atggcaacctacaagaagatgatttatacataagtacaagtaagataaagcttcaggttcctcaaggatcaaatgctgttttggtgaagaatttgtacct |
32258723 |
T |
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| Q |
295 |
ttcttgtgatccagtcatgcaattcc |
320 |
Q |
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|||||||||||||||||||||||||| |
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| T |
32258724 |
ttcttgtgatccagtcatgcaattcc |
32258749 |
T |
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