View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1139_low_136 (Length: 319)
Name: NF1139_low_136
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1139_low_136 |
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Alignment Details
Target: chr3 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 98 - 247
Target Start/End: Original strand, 36230427 - 36230576
Alignment:
| Q |
98 |
tgaaacacataggagaatcaacattactttcttccttaattataccacttgaattactttctgaacctcctctttctatacctcttgaaattggacattc |
197 |
Q |
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| T |
36230427 |
tgaaacacataggagaatcaacattactttcttccttaattataccacttgaattactttctgaacctcctctttctatacctcttgaaattggacattc |
36230526 |
T |
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| Q |
198 |
tacttctttctctaactcattgctttcaactcttaacaatttcgctttca |
247 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
36230527 |
tacttctttctctaactcattgctttcaactcgtaacaatttcgctttca |
36230576 |
T |
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