View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1139_low_185 (Length: 255)
Name: NF1139_low_185
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1139_low_185 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 96 - 255
Target Start/End: Original strand, 29291720 - 29291879
Alignment:
| Q |
96 |
ttattgaatattagatccacttttttattaatcttaaacaaacggacactaagtttacatatatatggtttcaacctaaataaataaatctcaaatttta |
195 |
Q |
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| T |
29291720 |
ttattgaatattaggtccacttttttattaatcttaaacaaacggacactaagtttacatatatatggtttcaacctaaataaataaatctcaaatttta |
29291819 |
T |
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| Q |
196 |
gaaattcctcgtcattaaccactaagctaaaattaattctaggaaataaaattaaagttg |
255 |
Q |
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| T |
29291820 |
gaaattcctcgtcattaaccaccaagctaaaattaattctaggaaataaaattaaagttg |
29291879 |
T |
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