View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1139_low_195 (Length: 252)

Name: NF1139_low_195
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1139_low_195
NF1139_low_195
[»] chr6 (44 HSPs)
chr6 (1-242)||(26861375-26861615)
chr6 (1-162)||(31284126-31284287)
chr6 (8-168)||(27593215-27593375)
chr6 (1-162)||(26622814-26622975)
chr6 (1-162)||(26728792-26728953)
chr6 (14-162)||(27678784-27678932)
chr6 (14-168)||(27677815-27677969)
chr6 (14-162)||(27706603-27706751)
chr6 (7-140)||(26884023-26884156)
chr6 (8-162)||(27229070-27229224)
chr6 (8-180)||(27338260-27338432)
chr6 (8-180)||(27399000-27399172)
chr6 (8-179)||(27698689-27698860)
chr6 (8-179)||(27725040-27725211)
chr6 (8-170)||(28786108-28786270)
chr6 (8-170)||(28792229-28792391)
chr6 (8-179)||(27718574-27718745)
chr6 (8-170)||(26655819-26655981)
chr6 (8-170)||(26761790-26761952)
chr6 (8-162)||(26802280-26802434)
chr6 (8-162)||(27611197-27611351)
chr6 (8-162)||(28780977-28781131)
chr6 (8-138)||(27604900-27605030)
chr6 (1-140)||(26823700-26823839)
chr6 (2-142)||(26646337-26646477)
chr6 (2-142)||(26752305-26752445)
chr6 (24-180)||(27427814-27427970)
chr6 (8-111)||(27531392-27531495)
chr6 (7-102)||(25579617-25579712)
chr6 (47-138)||(28325343-28325434)
chr6 (8-102)||(28234462-28234556)
chr6 (8-102)||(28242702-28242796)
chr6 (8-70)||(29825957-29826019)
chr6 (25-102)||(26048743-26048820)
chr6 (25-102)||(26069912-26069989)
chr6 (8-81)||(27665312-27665385)
chr6 (24-102)||(25481640-25481718)
chr6 (96-162)||(26018770-26018836)
chr6 (8-102)||(26055824-26055918)
chr6 (8-102)||(26075794-26075888)
chr6 (96-162)||(26139474-26139540)
chr6 (8-138)||(28185228-28185358)
chr6 (53-102)||(2184186-2184235)
chr6 (40-81)||(28098596-28098637)
[»] chr4 (7 HSPs)
chr4 (2-170)||(18724261-18724429)
chr4 (2-170)||(18699576-18699744)
chr4 (2-162)||(18731680-18731840)
chr4 (2-162)||(18655653-18655813)
chr4 (2-162)||(18679743-18679903)
chr4 (24-180)||(17989248-17989404)
chr4 (24-180)||(18073585-18073741)
[»] scaffold0349 (3 HSPs)
scaffold0349 (8-179)||(3617-3788)
scaffold0349 (8-179)||(14550-14721)
scaffold0349 (73-179)||(8061-8167)
[»] scaffold0277 (2 HSPs)
scaffold0277 (8-170)||(4866-5028)
scaffold0277 (8-162)||(13827-13981)
[»] scaffold1254 (1 HSPs)
scaffold1254 (8-170)||(112-274)
[»] scaffold0419 (1 HSPs)
scaffold0419 (8-170)||(7355-7517)
[»] chr1 (3 HSPs)
chr1 (1-167)||(268532-268698)
chr1 (2-170)||(28164538-28164706)
chr1 (7-139)||(28127861-28127993)
[»] chr8 (2 HSPs)
chr8 (1-162)||(29273958-29274119)
chr8 (17-81)||(31903770-31903834)
[»] scaffold0003 (1 HSPs)
scaffold0003 (24-180)||(59393-59549)
[»] scaffold0019 (1 HSPs)
scaffold0019 (8-138)||(58477-58607)
[»] scaffold0038 (3 HSPs)
scaffold0038 (47-138)||(116658-116749)
scaffold0038 (8-102)||(34623-34717)
scaffold0038 (8-102)||(42864-42958)
[»] chr2 (1 HSPs)
chr2 (8-167)||(17993879-17994038)
[»] scaffold0713 (1 HSPs)
scaffold0713 (96-162)||(5916-5982)
[»] scaffold0781 (1 HSPs)
scaffold0781 (53-102)||(91-140)


Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 26861615 - 26861375
Alignment:
Q  1 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26861615 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattaccggtaaaaccataccgagtgtcacttcctctgaaactgagg 26861516  T
Q  101 aatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaataattggatgagaaaaaatagtt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26861515 aatacctggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaatt-ggataaataattggatgagaaaaaatagtt 26861417  T
Q  201 tgggaatgcaaactatgaacaaataagtaactgtggtctgtg 242  Q
    | ||||||||||||||||||||||||||||||||||||||||    
T  26861416 taggaatgcaaactatgaacaaataagtaactgtggtctgtg 26861375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 31284287 - 31284126
Alignment:
Q  1 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagg 100  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||    
T  31284287 ttcactatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagattgccggtgaaaccataccgagtgtcacttcccctgaaactaagg 31284188  T
Q  101 aatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    |||||||||||||||||| |||||||||| |||||||||||| ||| |||||||||||||||    
T  31284187 aatacttggtatttgaatacataggaaattgaagaggaagaggaagatgattgcatagccat 31284126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 8 - 168
Target Start/End: Original strand, 27593215 - 27593375
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| ||||||||||  |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  27593215 tcatcaatgaaggtgttgattcccttgtcagtaagagccttgtagagattgccggtgaaaccgtaccgagtgtcacttcctctgaaactgaggaatactt 27593314  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaat 168  Q
    |||||||| |  |||||||||| |||| ||||||| ||||||||||||||||||| |||||    
T  27593315 ggtatttgtaatcataggaaattgaagtggaagaggaaggtgattgcatagccatgagaat 27593375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26622975 - 26622814
Alignment:
Q  1 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagg 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || || ||||| |||||||||||||| ||||||||||| |||    
T  26622975 ttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaacttagg 26622876  T
Q  101 aatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    || |||||||||||||||  ||||||||| |||||||||||| | |||||||||||||||||    
T  26622875 aacacttggtatttgaattgataggaaattgaagaggaagaggatggtgattgcatagccat 26622814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 26728953 - 26728792
Alignment:
Q  1 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagg 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| || || ||||| |||||||||||||| ||||||||||| |||    
T  26728953 ttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatttccagtgaaaccgtaccgagtgtcactgcctctgaaacttagg 26728854  T
Q  101 aatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    || |||||||||||||||  ||||||||| |||||||||||| | |||||||||||||||||    
T  26728853 aacacttggtatttgaattgataggaaattgaagaggaagaggatggtgattgcatagccat 26728792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 27678932 - 27678784
Alignment:
Q  14 atgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatt 113  Q
    ||||||||||  |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27678932 atgaaggtgttgattcccttgtcagtaagagccttgtagagattcccggtgaaaccgtaccgagtgtcacttcctctgaaactgaggaatacttggtatt 27678833  T
Q  114 tgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    || |  |||||||||| |||| ||||||| |||||||||||||||||||    
T  27678832 tgtactcataggaaattgaagtggaagaggaaggtgattgcatagccat 27678784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 168
Target Start/End: Original strand, 27677815 - 27677969
Alignment:
Q  14 atgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatt 113  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  27677815 atgaaggtgtggattcccttgtcatcaagagccttgtagagattgccggtgaaaccgtaccgagtgtcacttcctctgaaattgaggaatacttggtatt 27677914  T
Q  114 tgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaat 168  Q
    || |  |||||||||| |||| ||||||| ||||||||||||||||||| |||||    
T  27677915 tgtactcataggaaattgaagtggaagaggaaggtgattgcatagccatgagaat 27677969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 162
Target Start/End: Original strand, 27706603 - 27706751
Alignment:
Q  14 atgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatt 113  Q
    ||||||||||| ||||||||||||  || |||||||||||||||||| || ||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  27706603 atgaaggtgtggattcccttgtcatcaaaagccttgtagagattgcctgtgaaaccgtaccgagtgtcacctcctctgaaactgaggaatacttggtatt 27706702  T
Q  114 tgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    || |  |||||||||| |||| ||||||| |||||||||||||||||||    
T  27706703 tgtactcataggaaattgaagtggaagagaaaggtgattgcatagccat 27706751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 7 - 140
Target Start/End: Complemental strand, 26884156 - 26884023
Alignment:
Q  7 atcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatact 106  Q
    |||||| ||||||||||| |||||||||| ||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||    
T  26884156 atcatcaatgaaggtgtggattcccttgttagtaagagccttgtagagatttccagtgaaaccataccgagtgtcacttcctctgaaactgaggaacact 26884057  T
Q  107 tggtatttgaatccataggaaatggaagaggaag 140  Q
    |||||  |||||||||||||||  ||||||||||    
T  26884056 tggtaagtgaatccataggaaaatgaagaggaag 26884023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 27229224 - 27229070
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||| | |||||||||| | || || ||||| ||||| ||||    
T  27229224 tcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaacactt 27229125  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    ||||  |||||||| ||||||  |||||||||||| |||||||||| ||||||||    
T  27229124 ggtaagtgaatccaaaggaaaatgaagaggaagaggaaggtgattgtatagccat 27229070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 27338260 - 27338432
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| |  | || ||||||||||| || |    
T  27338260 tcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccgtaaagagtgtcaatgtccctaaaactgaggaacacat 27338359  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaataa 180  Q
    |||||||||| ||| ||||||| |||||||||||| || |||||||||||||||| ||||||| || ||||||    
T  27338360 ggtatttgaacccagaggaaattgaagaggaagaggaaagtgattgcatagccatgagaattgagagaaataa 27338432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 27399000 - 27399172
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||| ||||||||||||||||||||||||||||||| ||  |||||||| |  | || ||||||||||| || |    
T  27399000 tcatcaatgaaggttttgattcccttgtcaataagagccttgtagagattgccggtaaaaccgtaaagagtgtcaatgtccctaaaactgaggaacacat 27399099  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaataa 180  Q
    |||||||||| ||| ||||||| |||||||||||| || |||||||||||||||| ||||||| || ||||||    
T  27399100 ggtatttgaacccagaggaaattgaagaggaagaggaaagtgattgcatagccatgagaattgagagaaataa 27399172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 27698689 - 27698860
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| | || || ||||||| ||| ||||    
T  27698689 tcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactgatgaacactt 27698788  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaata 179  Q
    ||||  |||||||||||||||  |||| ||| ||| |||||||||| |||||||| ||||||| || |||||    
T  27698789 ggtaagtgaatccataggaaaatgaagtggatgaggaaggtgattgtatagccatgagaattgagagaaata 27698860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 27725040 - 27725211
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| | || || ||||| ||||| ||||    
T  27725040 tcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaacactt 27725139  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaata 179  Q
    ||||  |||||||||||||||  |||||||| ||| |||||||||| |||||||| | ||||| || |||||    
T  27725140 ggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccatgacaattgagagaaata 27725211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 28786270 - 28786108
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||| | || || ||||||||||| ||||    
T  28786270 tcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacactt 28786171  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    ||||  |||||||||||||||  |||||||| ||| |||||||||| |||||||| |||||||    
T  28786170 ggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccataagaattg 28786108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 28792391 - 28792229
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||| | || || ||||||||||| ||||    
T  28792391 tcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacactt 28792292  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    ||||  |||||||||||||||  |||||||| ||| |||||||||| |||||||| |||||||    
T  28792291 ggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccataagaattg 28792229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 27718574 - 27718745
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||  | |||||||||| | || || ||||||||||| ||||    
T  27718574 tcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaactgtgccgagtgtcagtgcccctaaaactgaggaacactt 27718673  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaata 179  Q
    ||||  ||||||||| ||| |  |||||||| ||| |||||||||| |||||||| ||||||| || |||||    
T  27718674 ggtaagtgaatccatgggagaatgaagaggatgaggaaggtgattgtatagccatgagaattgagagaaata 27718745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 26655981 - 26655819
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| ||||| || || |||||||| ||| ||||||||||||||||||||||||||||||| | ||| |||||| | || || ||||||||||| ||||    
T  26655981 tcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaaccgtgccgggtgtcaatgcccctaaaactgaggaacactt 26655882  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    ||||||| || ||||||||||  |||||||| ||| |||||||||| |||||||| |||||||    
T  26655881 ggtatttaaacccataggaaaatgaagaggatgaggaaggtgattgtatagccatgagaattg 26655819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 26761952 - 26761790
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| ||||| || || |||||||| ||| ||||||||||||||||||||||||||||||| | ||| |||||| | || || ||||||||||| ||||    
T  26761952 tcatcaatgaaagtatggattcccttatcaataagagccttgtagagattgccggtaaaaccgtgccgggtgtcaatgcccctaaaactgaggaacactt 26761853  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    ||||||| || ||||||||||  |||||||| ||| |||||||||| |||||||| |||||||    
T  26761852 ggtatttaaacccataggaaaatgaagaggatgaggaaggtgattgtatagccatgagaattg 26761790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 26802434 - 26802280
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| || |||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| | || || ||||||||||| ||||    
T  26802434 tcatcaatgaaggtatggattcccttgtcaataagagccttgtagagattgcccgtaaaaccgtaccgagtgtcagtgcccctaaaactgaggaacactt 26802335  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    ||||  |||||||||| ||||  |||||||| ||| |||| || |||||||||||    
T  26802334 ggtaagtgaatccataagaaaatgaagaggatgaggaaggagactgcatagccat 26802280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 27611197 - 27611351
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||| | || || ||||||||||| ||||    
T  27611197 tcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacactt 27611296  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    ||||  |||||||||||||||  ||||| |||||| ||| | |||||||||||||    
T  27611297 ggtaagtgaatccataggaaaatgaagaagaagaggaagctaattgcatagccat 27611351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 162
Target Start/End: Complemental strand, 28781131 - 28780977
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| | || || ||||||||||| ||||    
T  28781131 tcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacactt 28781032  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    ||||  ||||| || ||||||  |||||||||||| ||||| |||||||||||||    
T  28781031 ggtaagtgaatgcagaggaaaatgaagaggaagaggaaggtaattgcatagccat 28780977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 27604900 - 27605030
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | || || ||||| ||||| ||||    
T  27604900 tcatcaatgaaggtatgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtatcgagtgtcagtgcccctaaaactaaggaacactt 27604999  T
Q  108 ggtatttgaatccataggaaatggaagagga 138  Q
    ||||  ||||| |||||||||  ||||||||    
T  27605000 ggtaagtgaatgcataggaaaatgaagagga 27605030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 26823839 - 26823700
Alignment:
Q  1 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagg 100  Q
    |||||||||||| |  |||||||| ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||   ||||| ||||||||     
T  26823839 ttcacgatcatcaaaaaaggtgtggattcccttgtctgtaagagccttgtagagattgccggtaaattcataccgagtgtcagcgcctctaaaactgaga 26823740  T
Q  101 aatacttggtatttgaatccataggaaatggaagaggaag 140  Q
    || ||||||||||||||  |||| ||||  ||||||||||    
T  26823739 aacacttggtatttgaaatcatatgaaactgaagaggaag 26823700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 26646477 - 26646337
Alignment:
Q  2 tcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagga 101  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||  || |||||||| |  ||||||||||| || |||||  ||||||    
T  26646477 tcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaaccgtcacgagtgtcactgcccctgaagttgagga 26646378  T
Q  102 atacttggtatttgaatccataggaaatggaagaggaagag 142  Q
    | || |||||  ||||||| ||||||||  |||||||||||    
T  26646377 agacctggtaggtgaatccgtaggaaattaaagaggaagag 26646337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 142
Target Start/End: Complemental strand, 26752445 - 26752305
Alignment:
Q  2 tcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagga 101  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||||  || |||||||| |  ||||||||||| || |||||  ||||||    
T  26752445 tcacaatcatcaatgaaggtgtgaattcccttgtcagtaagagccttgtagagatgtccagtaaaaccgtcacgagtgtcactgcccctgaagttgagga 26752346  T
Q  102 atacttggtatttgaatccataggaaatggaagaggaagag 142  Q
    | || |||||  ||||||| ||||||||  |||||||||||    
T  26752345 agacctggtaggtgaatccgtaggaaattaaagaggaagag 26752305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 27427814 - 27427970
Alignment:
Q  24 gaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccata 123  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||| |||||||||||  | ||  |  || ||||||| || | |||  ||||| ||||    
T  27427814 gaattcccttgtcaataagagccttcaagagattgccggtgaaaccgtaccgagtgtcggtgcccttacaaatgaggaacacatcgtaactgaatgcata 27427913  T
Q  124 ggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaataa 180  Q
    |||||  ||||||||| || ||||| ||||||| ||||| ||||||| || ||||||    
T  27427914 ggaaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataa 27427970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 27531392 - 27531495
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||    || || ||||||||||| ||||    
T  27531392 tcatcaatgaaggtatagattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtccgcgcccctaaaactgaggaacactt 27531491  T
Q  108 ggta 111  Q
    ||||    
T  27531492 ggta 27531495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 102
Target Start/End: Complemental strand, 25579712 - 25579617
Alignment:
Q  7 atcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    |||||| | ||||||  ||||||||||||||  ||||||||| |||||||| |||||||||   |  ||||||||||| |||||||||||||||||    
T  25579712 atcatcaaagaaggtacgaattcccttgtcaacaagagccttatagagattaccggtaaaagtgttgcgagtgtcactgcctctgaaactgaggaa 25579617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 28325434 - 28325343
Alignment:
Q  47 ttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagagga 138  Q
    ||||||||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| || |  ||  ||||||||||||||| |||||||||    
T  28325434 ttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaacacgtcataggtgaatccataggaaaaggaagagga 28325343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 28234556 - 28234462
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    ||||| ||||||||||| |||||||||| |  ||||||  | ||||||||  ||||||||||||| ||||||||||| ||||| ||||| |||||    
T  28234556 tcatcaatgaaggtgtggattcccttgtgacaaagagctctatagagattttcggtaaaaccatagcgagtgtcactacctctaaaactaaggaa 28234462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 28242796 - 28242702
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    ||||| ||||||||| |||||||||| | |  |||| | ||||||||||| || ||||||||||| ||||||||||| ||||| ||||| |||||    
T  28242796 tcatcaatgaaggtgcgaattcccttcttacaaagatctttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaa 28242702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 29826019 - 29825957
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaacca 70  Q
    ||||| ||||||||| |||||  ||||||||| ||||| ||||||||||||||||||||||||    
T  29826019 tcatcaatgaaggtgcgaattttcttgtcagttagagctttgtagagattgccggtaaaacca 29825957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 26048820 - 26048743
Alignment:
Q  25 aattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    ||||||||||||| | |||||||| |||||||| |||||||||   |  ||||||||||| || ||||||||||||||    
T  26048820 aattcccttgtcaatgagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaactgaggaa 26048743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 26069989 - 26069912
Alignment:
Q  25 aattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    ||||||||||||| | |||||||| |||||||| |||||||||   |  ||||||||||| || ||||||||||||||    
T  26069989 aattcccttgtcaatgagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaactgaggaa 26069912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 27665312 - 27665385
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtc 81  Q
    ||||| ||||||||||| ||||| ||||||| ||||||||| ||||| || ||||| |||||| | ||||||||    
T  27665312 tcatcaatgaaggtgtggattcctttgtcagaaagagccttatagaggttaccggtgaaaccaaatcgagtgtc 27665385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 25481718 - 25481640
Alignment:
Q  24 gaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    ||||||||||||||  ||||||||| |||||||| |||||||||   |  ||||||||||| || |||||| |||||||    
T  25481718 gaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaattgaggaa 25481640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 26018770 - 26018836
Alignment:
Q  96 tgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    ||||||| ||||||||| ||| ||||||||||| ||| |||| |||  |||||||||| ||||||||    
T  26018770 tgaggaacacttggtatgtgagtccataggaaaaggatgaggtagacgaaggtgattgaatagccat 26018836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 26055918 - 26055824
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    ||||| ||||| || | |||||||||||||  ||||||||| |||||||| |||||||||   |  ||||||||||| || |||||| |||||||    
T  26055918 tcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaaatgaggaa 26055824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 26075888 - 26075794
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    ||||| ||||| || | |||||||||||||  ||||||||| |||||||| |||||||||   |  ||||||||||| || |||||| |||||||    
T  26075888 tcatcaatgaaagtattaattcccttgtcaacaagagccttatagagattaccggtaaaattgttgcgagtgtcactgcccctgaaattgaggaa 26075794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Original strand, 26139474 - 26139540
Alignment:
Q  96 tgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    ||||||| ||||||||| ||| ||||||||||| ||| |||| |||| |||||||||| ||| ||||    
T  26139474 tgaggaacacttggtatgtgagtccataggaaaaggatgaggtagaggaaggtgattgaataaccat 26139540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 138
Target Start/End: Complemental strand, 28185358 - 28185228
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||||||||||||  | ||||||||||||  ||||||  | | |||||| || ||||||| ||| ||||||||||| ||||| || || ||||| || |    
T  28185358 tcatccatgaaggttcggattcccttgtcacaaagagctctattgagatttccagtaaaacgataacgagtgtcactacctctaaagctaaggaacacgt 28185259  T
Q  108 ggtatttgaatccataggaaatggaagagga 138  Q
      ||  ||||||||||||| | |||||||||    
T  28185258 cataggtgaatccataggagaaggaagagga 28185228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 2184235 - 2184186
Alignment:
Q  53 agattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    |||||||||||||||||||  |||||||||  |||||||||||| |||||    
T  2184235 agattgccggtaaaaccatggcgagtgtcagctcctctgaaacttaggaa 2184186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 28098596 - 28098637
Alignment:
Q  40 aagagccttgtagagattgccggtaaaaccataccgagtgtc 81  Q
    |||||| ||||||||||| || ||||||||||||||||||||    
T  28098596 aagagctttgtagagatttccagtaaaaccataccgagtgtc 28098637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 1e-40; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 18724261 - 18724429
Alignment:
Q  2 tcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagga 101  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||  || |||||||| |  ||||||||||| || ||||| |||||||    
T  18724261 tcacggtcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaagctgagga 18724360  T
Q  102 atacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    | ||||||||  |||||| ||||||||  |||||||| ||| ||||||||||||||||||| |||||||    
T  18724361 acacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggtgattgcatagccatgagaattg 18724429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 18699576 - 18699744
Alignment:
Q  2 tcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagga 101  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||| ||| |||||||| |  ||||||||| | || ||||| |||||||    
T  18699576 tcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatggccagtaaaaccgtcacgagtgtcagtgcccctgaagctgagga 18699675  T
Q  102 atacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    | ||||||||  |||||| ||||||||  |||||||| ||| ||||||||||||||||||| |||||||    
T  18699676 acacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggtgattgcatagccatgagaattg 18699744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 18731680 - 18731840
Alignment:
Q  2 tcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagga 101  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||  ||||||||| ||| |||||||| |  ||||||||||| || ||||| |||||||    
T  18731680 tcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctctgtagagatggccagtaaaaccgtcacgagtgtcactgcccctgaagctgagga 18731779  T
Q  102 atacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    | ||||||||  |||||| ||||||||  |||||||| ||| |||||||||||||||||||    
T  18731780 acacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggtgattgcatagccat 18731840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 18655653 - 18655813
Alignment:
Q  2 tcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagga 101  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||  || |||||||| |  ||||||||||| || ||||| |||||||    
T  18655653 tcacggtcatcaatgaaggtgtggattcccttgtcagtaagagctttgtagagatgcccagtaaaaccgttacgagtgtcactgcccctgaagctgagga 18655752  T
Q  102 atacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    | ||||||||  |||||| ||||||||  |||||||| ||| ||||||||||| |||||||    
T  18655753 acacttggtaagtgaatcgataggaaaatgaagaggatgaggaaggtgattgcctagccat 18655813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 162
Target Start/End: Original strand, 18679743 - 18679903
Alignment:
Q  2 tcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagga 101  Q
    ||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||  || |||||||| |  ||||||||||| || ||||| |||||||    
T  18679743 tcacggtcatcaatgaaggtgtggattcctttgtcagtaagagccttgtagagatgaccagtaaaaccgttacgagtgtcactgcccctgaagctgagga 18679842  T
Q  102 atacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    | ||||||||  |||||| ||||||||  |||||| | ||| |||||||||||||||||||    
T  18679843 acacttggtaagtgaatcgataggaaaatgaagagaatgaggaaggtgattgcatagccat 18679903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 180
Target Start/End: Original strand, 17989248 - 17989404
Alignment:
Q  24 gaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccata 123  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||| |||||||||||  | ||  |  || ||||||| || | |||  ||||| ||||    
T  17989248 gaattcccttgtcaataagagccttcaagagattgccggtgaaaccgtaccgagtgtcggtgcccttacaaatgaggaacacatcgtaactgaatgcata 17989347  T
Q  124 ggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaataa 180  Q
    |||||  ||||||||| || ||||| ||||||| ||||| ||||||| || ||||||    
T  17989348 ggaaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataa 17989404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 18073741 - 18073585
Alignment:
Q  24 gaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccata 123  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||| |||||||||||  | ||  |  || ||||||| || | |||  ||||| ||||    
T  18073741 gaattcccttgtcaataagagccttcaagagattgccggtgaaaccgtaccgagtgtcggtgcccttacaaatgaggaacacatcgtaactgaatgcata 18073642  T
Q  124 ggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaataa 180  Q
    |||||  ||||||||| || ||||| ||||||| ||||| ||||||| || ||||||    
T  18073641 ggaaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataa 18073585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 3617 - 3788
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| | || || ||||| ||||| ||||    
T  3617 tcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactaaggaacactt 3716  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaata 179  Q
    ||||  |||||||||||||||  |||||||| ||| |||||||||| |||||||| | ||||| || |||||    
T  3717 ggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccatgacaattgagagaaata 3788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 179
Target Start/End: Original strand, 14550 - 14721
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| | || || ||||||| ||| ||||    
T  14550 tcatcaatgaaggtatggattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtgccgagtgtcagtgcccctaaaactgatgaacactt 14649  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaata 179  Q
    ||||  |||||||||||||||  |||| ||| ||| |||||||||| |||||||| ||||||| || |||||    
T  14650 ggtaagtgaatccataggaaaatgaagtggatgaggaaggtgattgtatagccatgagaattgagagaaata 14721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 179
Target Start/End: Original strand, 8061 - 8167
Alignment:
Q  73 ccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattggg 172  Q
    |||||||||| | || || ||||||||||| ||||||||  ||||||||| ||| |  |||||||| ||| |||||||||| |||||||| ||||||| |    
T  8061 ccgagtgtcagtgcccctaaaactgaggaacacttggtaagtgaatccatgggagaatgaagaggatgaggaaggtgattgtatagccatgagaattgag 8160  T
Q  173 ataaata 179  Q
    | |||||    
T  8161 agaaata 8167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 4866 - 5028
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||||| ||||||||||| |  ||||||||| | || || ||||||||||| ||||    
T  4866 tcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagatttccggtaaaaccgtggcgagtgtcaatgcccctaaaactgaggaacactt 4965  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    ||||  |||||||||||||||  |||||||| ||| |||||||||| |||||||| |||||||    
T  4966 ggtaagtgaatccataggaaaatgaagaggatgaggaaggtgattgtatagccataagaattg 5028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 13827 - 13981
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| | || || ||||||||||| ||||    
T  13827 tcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactgaggaacactt 13926  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    ||||  ||||| || ||||||  |||||||||||| ||||| |||||||||||||    
T  13927 ggtaagtgaatgcagaggaaaatgaagaggaagaggaaggtaattgcatagccat 13981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 170
Target Start/End: Original strand, 112 - 274
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| | || || ||||| ||||| ||||    
T  112 tcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactaaggaacactt 211  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    ||||  ||||| |||| ||||  ||||||||||||  |||||||||||||||||| |||||||    
T  212 ggtaagtgaatgcatatgaaaatgaagaggaagagggaggtgattgcatagccatgagaattg 274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 8 - 170
Target Start/End: Complemental strand, 7517 - 7355
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| |||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||| | || || ||||| ||||| ||||    
T  7517 tcatcaatgaaggttttgattcccttgtcagtaagagccttgtagagattgccggtaaaaccgtggcgagtgtcagtgcccctaaaactaaggaacactt 7418  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    ||||  ||||| |||| ||||  ||||||||||||  |||||||||||||||||| |||||||    
T  7417 ggtaagtgaatgcatatgaaaatgaagaggaagagggaggtgattgcatagccatgagaattg 7355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 268532 - 268698
Alignment:
Q  1 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagg 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||  ||||||| |  ||||||||||  ||||||||  |||||    
T  268532 ttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagccttgtagagatggccaataaaaccctcacgagtgtcaccgcctctgaagttgagg 268631  T
Q  101 aatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaa 167  Q
    || || |||||    |||||||| || || |||||||||||| ||||||||||||||||||| ||||    
T  268632 aagacctggtaggcaaatccatatgagattgaagaggaagaggaaggtgattgcatagccatgagaa 268698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 170
Target Start/End: Original strand, 28164538 - 28164706
Alignment:
Q  2 tcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagga 101  Q
    |||| |||||| ||||| |||||||||||||||||   ||| ||||| ||||||| ||| || ||||| |  ||||||||||| || || ||||||||||    
T  28164538 tcacaatcatcaatgaatgtgtgaattcccttgtcgtcaagggccttatagagatggccagtgaaaccgtcacgagtgtcactgcccctaaaactgagga 28164637  T
Q  102 atacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaattg 170  Q
    | ||||||||| |||||||||||||||| |||||||||||| || | ||| | |||||||| |||||||    
T  28164638 acacttggtatgtgaatccataggaaattgaagaggaagaggaatgcgatcgtatagccatgagaattg 28164706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 139
Target Start/End: Original strand, 28127861 - 28127993
Alignment:
Q  7 atcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatact 106  Q
    |||||| ||||| ||||| ||||||||||||  ||| ||||||||||||| ||| || ||||| |  ||||||||||| || ||||| |||||||| |||    
T  28127861 atcatcaatgaatgtgtggattcccttgtcataaagggccttgtagagatggccagtgaaaccgtcacgagtgtcactgcccctgaagctgaggaacact 28127960  T
Q  107 tggtatttgaatccataggaaatggaagaggaa 139  Q
    |||||| |||||||||||||||| |||||||||    
T  28127961 tggtatgtgaatccataggaaattgaagaggaa 28127993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29273958 - 29274119
Alignment:
Q  1 ttcacgatcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgagg 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| |||  ||||||| |  ||||||||||  ||||| ||  |||||    
T  29273958 ttcacgatcatcaatgaaggtgtggattcccttgtcagtaagagtcttgtagagatggccaataaaaccgtcacgagtgtcaccgcctctaaagttgagg 29274057  T
Q  101 aatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    || || |||||  |||||||||| || || |||||||||||| |||||||||||||||||||    
T  29274058 aagacctggtaagtgaatccatatgagattgaagaggaagaggaaggtgattgcatagccat 29274119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 31903834 - 31903770
Alignment:
Q  17 aaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtc 81  Q
    |||||||| |||||||| |||  |||||| ||||||||||| || ||||||||||| ||||||||    
T  31903834 aaggtgtggattcccttatcataaagagctttgtagagatttccagtaaaaccatagcgagtgtc 31903770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 180
Target Start/End: Complemental strand, 59549 - 59393
Alignment:
Q  24 gaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccata 123  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||| |||||||||||  | ||  |  || ||||||| || | |||  ||||| ||||    
T  59549 gaattcccttgtcaataagagccttcaagagattgccggtgaaaccgtaccgagtgtcggtgcccttacaaatgaggaacacatcgtaactgaatgcata 59450  T
Q  124 ggaaatggaagaggaagagcaaggtgattgcatagccatcagaattgggataaataa 180  Q
    |||||  ||||||||| || ||||| ||||||| ||||| ||||||| || ||||||    
T  59449 ggaaaatgaagaggaatagaaaggtaattgcatggccatgagaattgagagaaataa 59393  T

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Target: scaffold0019 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 138
Target Start/End: Original strand, 58477 - 58607
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||||||||||||  | ||||||||||||  ||||||  |||||||||| || ||||||||||| ||||||||||  ||||| || || ||||| || |    
T  58477 tcatccatgaaggttcggattcccttgtcacaaagagctctgtagagatttccagtaaaaccatagcgagtgtcacaacctctaaagctaaggaacacgt 58576  T
Q  108 ggtatttgaatccataggaaatggaagagga 138  Q
    | ||  ||||||||||||| | |||||||||    
T  58577 gataggtgaatccataggagaaggaagagga 58607  T

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Target: scaffold0038 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 116749 - 116658
Alignment:
Q  47 ttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatacttggtatttgaatccataggaaatggaagagga 138  Q
    ||||||||||| || ||||||||||| ||||||||||| ||||| ||||| ||||| || |  ||  ||||||||||||||| |||||||||    
T  116749 ttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaacacgtcataggtgaatccataggaaaaggaagagga 116658  T

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Target: scaffold0038; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 34717 - 34623
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    ||||| ||||||||||| |||||||||| |  ||||||  | ||||||||  ||||||||||||| ||||||||||| ||||| ||||| |||||    
T  34717 tcatcaatgaaggtgtggattcccttgtgacaaagagctctatagagattttcggtaaaaccatagcgagtgtcactacctctaaaactaaggaa 34623  T

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Target: scaffold0038; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 102
Target Start/End: Complemental strand, 42958 - 42864
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    ||||| ||||||||| |||||||||| | |  |||| | ||||||||||| || ||||||||||| ||||||||||| ||||| ||||| |||||    
T  42958 tcatcaatgaaggtgcgaattcccttcttacaaagatctttgtagagatttccagtaaaaccataacgagtgtcactacctctaaaactaaggaa 42864  T

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Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 17993879 - 17994038
Alignment:
Q  8 tcatccatgaaggtgtgaattcccttgtcagtaagagccttgtagagattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaatactt 107  Q
    ||||| ||||||||  ||||||||||||||| |||||| || |||||||| ||||| |||||||| ||||| ||  | || |||||||| | ||| || |    
T  17993879 tcatcgatgaaggttcgaattcccttgtcagaaagagctttatagagattaccggtgaaaccatatcgagtatcggtacccctgaaactaatgaacacat 17993978  T
Q  108 ggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccatcagaa 167  Q
     | |  |||| ||||| || | ||| || || ||| ||||||||||||||||||| ||||    
T  17993979 cgaagctgaaaccataagataaggaggaagaggaggaaggtgattgcatagccataagaa 17994038  T

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Target: scaffold0713 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 162
Target Start/End: Complemental strand, 5982 - 5916
Alignment:
Q  96 tgaggaatacttggtatttgaatccataggaaatggaagaggaagagcaaggtgattgcatagccat 162  Q
    ||||||| ||||||||| ||| ||||||||||| ||| |||| |||| |||||||||| ||| ||||    
T  5982 tgaggaacacttggtatgtgagtccataggaaaaggatgaggtagaggaaggtgattgaataaccat 5916  T

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Target: scaffold0781 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0781
Description:

Target: scaffold0781; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 91 - 140
Alignment:
Q  53 agattgccggtaaaaccataccgagtgtcacttcctctgaaactgaggaa 102  Q
    |||||||||||||||||||  |||||||||  |||||||||||| |||||    
T  91 agattgccggtaaaaccatggcgagtgtcagctcctctgaaacttaggaa 140  T

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