View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1139_low_233 (Length: 232)
Name: NF1139_low_233
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1139_low_233 |
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Alignment Details
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 28 - 226
Target Start/End: Original strand, 2094920 - 2095118
Alignment:
| Q |
28 |
gaaaggagccttggttaaacgggttaacgttgagagaaagatttaacatactttattgaatagcatacaggaaaaatacaataacgttgatgatgcaaaa |
127 |
Q |
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| T |
2094920 |
gaaaggagccttggttaaacgggttaacgttgagagaaagatttaacatactttattgaatagcataccggaaaaatacaataacgttgatgatgcaaaa |
2095019 |
T |
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| Q |
128 |
atgaattttagaaagggaagctccttaagactataatatagtgaaattcttctcatcattccttataattatcatatgtgattatttagatgctaaaga |
226 |
Q |
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| T |
2095020 |
atcaattttagaaagggaagctccttaagactataatatagtgaaattcttctcatcattccttataattatcatatgtgattatttatatgctaaaga |
2095118 |
T |
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