View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1139_low_66 (Length: 421)

Name: NF1139_low_66
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1139_low_66
NF1139_low_66
[»] chr6 (23 HSPs)
chr6 (30-410)||(13472985-13473365)
chr6 (152-410)||(13892992-13893250)
chr6 (152-410)||(14025100-14025358)
chr6 (164-410)||(13911654-13911900)
chr6 (164-392)||(14110307-14110535)
chr6 (148-410)||(13862818-13863080)
chr6 (161-410)||(14084495-14084744)
chr6 (173-410)||(13875288-13875525)
chr6 (164-410)||(14014981-14015227)
chr6 (164-410)||(13932179-13932425)
chr6 (287-410)||(14047305-14047427)
chr6 (30-106)||(13875601-13875677)
chr6 (30-106)||(13932051-13932127)
chr6 (30-104)||(14110164-14110238)
chr6 (41-105)||(14024980-14025044)
chr6 (30-93)||(14047092-14047155)
chr6 (152-239)||(14047211-14047298)
chr6 (30-100)||(13893311-13893381)
chr6 (30-100)||(13911510-13911579)
chr6 (36-100)||(14014844-14014908)
chr6 (30-106)||(14084358-14084434)
chr6 (30-105)||(13863132-13863207)
chr6 (30-91)||(14022406-14022467)


Alignment Details
Target: chr6 (Bit Score: 345; Significance: 0; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 30 - 410
Target Start/End: Complemental strand, 13473365 - 13472985
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaattcatatgtcttcctcgaatattggctgata 129  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||    
T  13473365 ttttaaaagaaacaatccattgttgttgaacagttcttctacacctttccaggtaaagaatgcactcaaatcatatgtcttcctcgtatattggccgata 13473266  T
Q  130 gcatactgatgactgcttaaatcttgtgataaagctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatg 229  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13473265 gcatactgatgactgcttaaatcttgtgataaatctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagatagattgttgaatg 13473166  T
Q  230 agagatcaaagagttgaatattttgtagataacaaagttcgaatggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaa 329  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  13473165 agagatcaaagagttgaatgttttgtagataacaaagttcgaatggtaaacttccaaagaagtgattcctttgtaagcttaaaacttggagctcttttaa 13473066  T
Q  330 ttcgcttccaatccaataagggatgagtccctttaatctattttctctcaaatctagcattactaactttgtacagttcat 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13473065 ttcgcttccaatccaataagggatgagtccctttaatctattttctctcaaatctagcattactaactttgtacagttcat 13472985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 152 - 410
Target Start/End: Complemental strand, 13893250 - 13892992
Alignment:
Q  152 cttgtgataaagctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaagagttgaatatt 251  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |||||| ||||||| ||||||||| ||||| ||    
T  13893250 cttgtgatgaagctttttgagtcattgaagtgaaatttttaatgcattttggaatccctccagatagattgttcaatgagaaatcaaagagctgaatgtt 13893151  T
Q  252 ttgtagataacaaagttcgaatggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaataaggg 351  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  13893150 ttgtagataacaaagtttgaatggtaaacttccaaagaagtgattactttttaagcttaaaacttgcagctcttttaatttgcttccaatccaataaggg 13893051  T
Q  352 atgagtccctttaatctattttctctcaaatctagcattactaactttgtacagttcat 410  Q
    | | |||| | ||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  13893050 acgggtccttctaatctattttctctcaaatcaagcattactaactttctgcagttcat 13892992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 152 - 410
Target Start/End: Original strand, 14025100 - 14025358
Alignment:
Q  152 cttgtgataaagctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaagagttgaatatt 251  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||| |||||  | ||||||| |||||| |||||||||||||| |||||||| ||    
T  14025100 cttgtgatgaagatttttgagtcattgaagtgaaatttttaatgcatttaggaattcgcccagatagattgtttaatgagagatcaaaaagttgaatctt 14025199  T
Q  252 ttgtagataacaaagttcgaatggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaataaggg 351  Q
    ||||||||  || ||||| |||||||||||||||  ||||||||| |||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  14025200 ttgtagatggcagagttccaatggtaaacttccatagaattgatttctttgtaagcttaaaacttgcaactcttttaattcacttccaatccaataaggg 14025299  T
Q  352 atgagtccctttaatctattttctctcaaatctagcattactaactttgtacagttcat 410  Q
    ||| |||| | ||||||||| ||||||||||| ||||||||||||||||| ||||||||    
T  14025300 atgtgtccttctaatctattgtctctcaaatcaagcattactaactttgtgcagttcat 14025358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 164 - 410
Target Start/End: Original strand, 13911654 - 13911900
Alignment:
Q  164 ctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaagagttgaatattttgtagataaca 263  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||  |||| |||||| ||||||||||||||||||||||| ||||||||||  ||    
T  13911654 ctttttgagtcattgaagtgaaatttttaatgcattttggaatccgtctggatagattgttcaatgagagatcaaagagttgaatgttttgtagatggca 13911753  T
Q  264 aagttcgaatggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaataagggatgagtcccttt 363  Q
     ||||||||||||||| |||||| ||| |||||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||||| || || | |    
T  13911754 gagttcgaatggtaaatttccaaagaagtgattcctctgtaagcttaaaacttgcaactcttttaattcccttccaatccaataagggataagcccatct 13911853  T
Q  364 aatctattttctctcaaatctagcattactaactttgtacagttcat 410  Q
    |||||||||||| |||||||||||||||  |||||||| ||||||||    
T  13911854 aatctattttctttcaaatctagcattatcaactttgtgcagttcat 13911900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 164 - 392
Target Start/End: Original strand, 14110307 - 14110535
Alignment:
Q  164 ctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaagagttgaatattttgtagataaca 263  Q
    |||||||||||||||| |||||||||||||||||||| |||||||  ||||| | |||||| ||||||||||||||||||||||||||||||| ||  ||    
T  14110307 ctttttgagtcattgaagtgaaatttttaatgcatttcggaatcttcccagagagattgttcaatgagagatcaaagagttgaatattttgtaaatggca 14110406  T
Q  264 aagttcgaatggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaataagggatgagtcccttt 363  Q
    |||||| |||||||||||||||| ||| ||||||||| |||||||||||| ||| || |||||||||| |||||||||||| |||||||||||||| |||    
T  14110407 aagttcaaatggtaaacttccaaagaaatgattccttcgtaagcttaaaatttgcagatcttttaatttgcttccaatccagtaagggatgagtccattt 14110506  T
Q  364 aatctattttctctcaaatctagcattac 392  Q
    |||||||||||||||||||| | ||||||    
T  14110507 aatctattttctctcaaatcaaacattac 14110535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 148 - 410
Target Start/End: Complemental strand, 13863080 - 13862818
Alignment:
Q  148 aaatcttgtgataaagctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaagagttgaa 247  Q
    |||||||||| | ||||||| ||||||||||| |||||||||||||||||||| ||||  |||||||| | |||||| ||||||||||||||||||||||    
T  13863080 aaatcttgtgttgaagctttctgagtcattgaagtgaaatttttaatgcatttaggaacttgtccagaaagattgtttaatgagagatcaaagagttgaa 13862981  T
Q  248 tattttgtagataacaaagttcgaatggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaata 347  Q
    ||||| | ||||| |||||||| | |||||||||||| | ||| |||||||| |||||||||||||| || ||||||||||| |||||||||||||||||    
T  13862980 tatttcgaagatagcaaagttctactggtaaacttccgaagaaatgattcctatgtaagcttaaaacctgcagctcttttaactcgcttccaatccaata 13862881  T
Q  348 agggatgagtccctttaatctattttctctcaaatctagcattactaactttgtacagttcat 410  Q
    |||||||| ||| | || ||| || ||||||| ||| ||||||||||||||||| ||||||||    
T  13862880 agggatgactccttctagtctgttgtctctcatatcaagcattactaactttgtgcagttcat 13862818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 161 - 410
Target Start/End: Original strand, 14084495 - 14084744
Alignment:
Q  161 aagctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaagagttgaatattttgtagata 260  Q
    ||||||||| ||||||||| || ||| ||||||||||||| |||||| ||||||||| || ||| |||||||||||||||||||||||  |||| ||| |    
T  14084495 aagctttttcagtcattgaagtaaaaattttaatgcatttgggaatccgtccagatagatagttcaatgagagatcaaagagttgaattctttgaagaaa 14084594  T
Q  261 acaaagttcgaatggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaataagggatgagtccc 360  Q
     |||||||||||||| |||||||||| ||| |||||||||||||||||||||| ||| | |||||| |||||||||||||||||||||||||  ||| |     
T  14084595 gcaaagttcgaatgggaaacttccaaagaagtgattcctttgtaagcttaaaaattgcaactctttcaattcgcttccaatccaataagggacaagttct 14084694  T
Q  361 tttaatctattttctctcaaatctagcattactaactttgtacagttcat 410  Q
    | ||||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  14084695 tctaatctattttctctaaaatcaagcattactaactttgtgcagttcat 14084744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 173 - 410
Target Start/End: Complemental strand, 13875525 - 13875288
Alignment:
Q  173 tcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaagagttgaatattttgtagataacaaagttcgaa 272  Q
    ||||||| |||||||||| ||||||||| ||||||  |||||||| |||||| ||||| | |||||||||||| || |||||||| || ||||||||||     
T  13875525 tcattgaagtgaaattttgaatgcatttgggaatccctccagatagattgttcaatgatacatcaaagagttggatgttttgtaggtagcaaagttcgag 13875426  T
Q  273 tggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaataagggatgagtccctttaatctattt 372  Q
     || |||||||||| ||| |||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| ||||| | ||||| ||||    
T  13875425 ggggaaacttccaaagaagtgattcctttgtaagcttaaaacttgcaactcttttaattcacttccaatccaataagggatcagtccttctaatccattt 13875326  T
Q  373 tctctcaaatctagcattactaactttgtacagttcat 410  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  13875325 tctctcaaatccagcattactaactttgtgcagttcat 13875288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 164 - 410
Target Start/End: Original strand, 14014981 - 14015227
Alignment:
Q  164 ctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaagagttgaatattttgtagataaca 263  Q
    |||||||||||||||| |||||||||||||| ||||  |||||| |||| |||| |||||| ||||| | ||||||||||| ||| ||||||| ||||||    
T  14014981 ctttttgagtcattgaagtgaaatttttaatacattcgggaatccgtccggatagattgttcaatgatacatcaaagagtttaatgttttgtatataaca 14015080  T
Q  264 aagttcgaatggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaataagggatgagtcccttt 363  Q
    || ||| |||||||||||||||| ||| | |||| ||||||| ||||||||||| | |  |||||||||  ||||||||||||||||||||||||| | |    
T  14015081 aatttcaaatggtaaacttccaaagaagttattcttttgtaaacttaaaacttgcaaccgttttaattcaattccaatccaataagggatgagtccttgt 14015180  T
Q  364 aatctattttctctcaaatctagcattactaactttgtacagttcat 410  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||||||    
T  14015181 aatctattttctcttaaatcaagcattactaactttgtgcagttcat 14015227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 164 - 410
Target Start/End: Original strand, 13932179 - 13932425
Alignment:
Q  164 ctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaagagttgaatattttgtagataaca 263  Q
    |||||||||||||||| |||| ||||||||||||||| |||||  ||||||||| | |||| |||||||||||||| | ||||||   ||||||||  ||    
T  13932179 ctttttgagtcattgaagtgagatttttaatgcatttgggaattcgtccagatagactgtttaatgagagatcaaaaaattgaatgaattgtagatggca 13932278  T
Q  264 aagttcgaatggtaaacttccaaggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaataagggatgagtcccttt 363  Q
     ||||| |||||||||||||||| ||| | ||||| || ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||| | |    
T  13932279 gagttccaatggtaaacttccaaagaagtaattcccttttaagcttaaaacttgcaactcttttaattcgcttccaatccaataagggatgtgtccttct 13932378  T
Q  364 aatctattttctctcaaatctagcattactaactttgtacagttcat 410  Q
    |||||||| |||||||  || ||||||||||||| ||| ||||||||    
T  13932379 aatctattgtctctcatgtcaagcattactaactgtgtgcagttcat 13932425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 287 - 410
Target Start/End: Original strand, 14047305 - 14047427
Alignment:
Q  287 ggaattgattcctttgtaagcttaaaacttggagctcttttaattcgcttccaatccaataagggatgagtccctttaatctattttctctcaaatctag 386  Q
    ||||||||||| ||||||||||||||| ||| || ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| ||    
T  14047305 ggaattgattc-tttgtaagcttaaaatttgtagatcttttaattcacttccaatccaataagggatgagtccttctaatctattttctctcaaatccag 14047403  T
Q  387 cattactaactttgtacagttcat 410  Q
    |||||| |||||||| ||||||||    
T  14047404 cattaccaactttgtgcagttcat 14047427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 13875677 - 13875601
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaattcatatg 106  Q
    ||||| ||||||||||  |||||||||||||| |||||||||||||||||| || |||| |||| ||||||||||||    
T  13875677 ttttagaagaaacaattgattgttgttgaacacttgttctacacctttccatgttaagagtgcattcaattcatatg 13875601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 13932051 - 13932127
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaattcatatg 106  Q
    ||||||||||| |||||||||||||||||| |  ||||||||||||||||| || || |||||| ||||||||||||    
T  13932051 ttttaaaagaaccaatccattgttgttgaagacatgttctacacctttccatgtcaacaatgcattcaattcatatg 13932127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 14110164 - 14110238
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaattcata 104  Q
    ||||| |||| |||| ||||||||||| |||  |||||||||||||||||| || ||||||||||||||||||||    
T  14110164 ttttagaagatacaagccattgttgttaaactcttgttctacacctttccatgtcaagaatgcactcaattcata 14110238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 105
Target Start/End: Original strand, 14024980 - 14025044
Alignment:
Q  41 acaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaattcatat 105  Q
    ||||| ||||||||||||||| |||||||||||||||||| || ||||||||| ||| |||||||    
T  14024980 acaattcattgttgttgaacacttgttctacacctttccatgtcaagaatgcattcagttcatat 14025044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Original strand, 14047092 - 14047155
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgca 93  Q
    ||||| ||||| ||||||||||||||||||||  ||||||||||||||||| || |||||||||    
T  14047092 ttttagaagaaccaatccattgttgttgaacacatgttctacacctttccatgtcaagaatgca 14047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 239
Target Start/End: Original strand, 14047211 - 14047298
Alignment:
Q  152 cttgtgataaagctttttgagtcattgaggtgaaatttttaatgcattttggaatctgtccagataaattgttgaatgagagatcaaa 239  Q
    |||| ||| |||| |||||||||||||| || |||||||  |||||||| ||||| |||||||||| ||| || ||||||||||||||    
T  14047211 cttgagatgaagccttttgagtcattgatgttaaattttgtatgcatttgggaatatgtccagatagattattcaatgagagatcaaa 14047298  T

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Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 100
Target Start/End: Complemental strand, 13893381 - 13893311
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaatt 100  Q
    ||||| ||||| |||||||||||||||||| | ||||||||||||||||||  | ||||||||| ||||||    
T  13893381 ttttagaagaagcaatccattgttgttgaaaaattgttctacacctttccacatcaagaatgcattcaatt 13893311  T

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Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 13911510 - 13911579
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaatt 100  Q
    ||||| ||||| |||||| ||||||||||||| ||||||||||||||||||  | ||||||||||||||||    
T  13911510 ttttagaagaagcaatcc-ttgttgttgaacaattgttctacacctttccacatcaagaatgcactcaatt 13911579  T

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Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 100
Target Start/End: Original strand, 14014844 - 14014908
Alignment:
Q  36 aagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaatt 100  Q
    |||| |||| |||||||||||||||  |||||||||||||||||| || ||||||||| ||||||    
T  14014844 aagagacaagccattgttgttgaactcttgttctacacctttccatgtcaagaatgcattcaatt 14014908  T

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Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 14084358 - 14084434
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaattcatatg 106  Q
    ||||| |||||| ||||||||||| ||||||| |||||||||||||||||| || ||   |||| ||||||||||||    
T  14084358 ttttagaagaaataatccattgtttttgaacatttgttctacacctttccaagtcaaatttgcattcaattcatatg 14084434  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 105
Target Start/End: Complemental strand, 13863207 - 13863132
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatgcactcaattcatat 105  Q
    ||||| |||||  |||| ||||||| ||||||||||||||||||||||||| || || |||||| |||||| ||||    
T  13863207 ttttagaagaacaaatcgattgttgatgaacagttgttctacacctttccatgtcaacaatgcattcaattgatat 13863132  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 14022406 - 14022467
Alignment:
Q  30 ttttaaaagaaacaatccattgttgttgaacagttgttctacacctttccaggtaaagaatg 91  Q
    ||||| ||| |||||| ||||||||||||| | ||| |||||||||||||| || |||||||    
T  14022406 ttttagaagcaacaattcattgttgttgaatacttggtctacacctttccatgttaagaatg 14022467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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