View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1139_low_8 (Length: 649)
Name: NF1139_low_8
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1139_low_8 |
 |  |
|
| [»] scaffold0524 (1 HSPs) |
 |  |  |
|
| [»] scaffold0003 (1 HSPs) |
 |  |  |
|
| [»] scaffold0045 (1 HSPs) |
 |  |  |
|
| [»] scaffold0264 (1 HSPs) |
 |  |  |
|
| [»] scaffold0014 (1 HSPs) |
 |  |  |
|
| [»] scaffold0188 (1 HSPs) |
 |  |  |
|
| [»] scaffold0021 (1 HSPs) |
 |  |  |
|
| [»] scaffold0002 (1 HSPs) |
 |  |  |
|
| [»] scaffold1266 (1 HSPs) |
 |  |  |
|
| [»] scaffold0674 (1 HSPs) |
 |  |  |
|
| [»] scaffold0549 (1 HSPs) |
 |  |  |
|
| [»] scaffold0190 (1 HSPs) |
 |  |  |
|
| [»] scaffold0050 (1 HSPs) |
 |  |  |
|
| [»] scaffold1152 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 472; Significance: 0; HSPs: 37)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 74 - 557
Target Start/End: Original strand, 6769921 - 6770404
Alignment:
| Q |
74 |
agcatagggtagcaagcaaggtccggggggtgcagaaatggcagaagactgactgtaagagcacgtggggggtgactggggacattacattacattacgt |
173 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6769921 |
agcatggggtagcaagcaaggtccggggggtgcagaaatggcagaagactgactgtaagagcacgtggggggtgactggggacattacattacattacgt |
6770020 |
T |
 |
| Q |
174 |
tgttaaattcaaaggtgaaaagctgaacaacacaagtagtagggtctggtgttgctgcaaccaacgacaataattcccaaacaattaaggaaaattctac |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6770021 |
tgttaaattcaaaggtgaaaagctgaacaacacaagtagtagggtctggtgttgctgcaaccaacgacaataattcccaaacaattaaggaaaattctac |
6770120 |
T |
 |
| Q |
274 |
tcatccttaatatggcaacatgagttcaaatctacatgttggttttgtgttttgatttgaaaatatacttaaccataattcatatttataccgtccaaaa |
373 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6770121 |
tcatccttaatatggcaacatgagttcaaatctacatgttggttttgtgttttgatttgaaaatatacttaaccataattcatatttataccgtccaaaa |
6770220 |
T |
 |
| Q |
374 |
atgcattttcagaaccatgttaaagctcttcacaagcaagggatgaaaattggtatcaattaaataaaagggaaatgatagtttaatttgatattaaagt |
473 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6770221 |
atgcattttcagaaccatgttaaagctcttcacaagcaagggatgaaaattggtatcaattaaataaaagggaaatgatagtttaatttgatattaaagt |
6770320 |
T |
 |
| Q |
474 |
tcgacaataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
6770321 |
tcgacaataatttaaagggaatggctaaccggtgcctccggggcactaattaaggatatgaaaaaggaaattatatagtagtta |
6770404 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 29210412 - 29210480
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
29210412 |
agggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
29210480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 38162850 - 38162917
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| | |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
38162850 |
gggaaatgttaaccggtgcctccggggcactggttaagggtatgaaaaagaaaattatatagtagtta |
38162917 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 18043159 - 18043229
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||| ||| |||||| ||||||||||||||||| |
|
|
| T |
18043159 |
aaagggaaatgctaaccggtgcctccggggcactggttaagggtataaaaaaggaaattatatagtagtta |
18043229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 29657770 - 29657838
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||| |||||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
29657770 |
agggaaatgctaaccggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagtta |
29657838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 5694321 - 5694388
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||||||||| |||| | ||||||||||||||||| |
|
|
| T |
5694321 |
gggaaatgctaaccggtgcctccggggcactggttaaggatataaaaagggaaattatatagtagtta |
5694388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 30657605 - 30657675
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||| |
|
|
| T |
30657605 |
aaagggaaatgctaaccggtgctcccggggcactagttaagcatatgaaaaaagaaattatatagtagtta |
30657675 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 47009990 - 47010060
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||||| |||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
47009990 |
aaagggaaatgctaatcggtgcatccggagcactggttaaggatatgaaaaaggaaattatatagtagtta |
47010060 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 51065937 - 51065867
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||||||||||| | ||||| |||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
51065937 |
aaagggaaatgctaaccggtgtccccgggacactggttaaggatatgaaaaagtaaattatatagtagtta |
51065867 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 557
Target Start/End: Complemental strand, 12072254 - 12072181
Alignment:
| Q |
484 |
tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||||| |
|
|
| T |
12072254 |
tttaaaggaaaatgctaaccggtgcccccggggcaccggttaaggatatgaaaaaggaaattatgtagtagtta |
12072181 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 42770178 - 42770109
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| |||| | |||||||||| ||||||||||||||||| |
|
|
| T |
42770178 |
aagggaaatgctaaccggtgcccccggggcactggttaatggtatgaaaaaggaaattatatagtagtta |
42770109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 47532857 - 47532789
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||| |||||| | ||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
47532857 |
aagggaaatgctaaccggtgtctccggagtactg-ttaaggatatgaaaaagaaaattatatagtagtta |
47532789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 19032002 - 19031934
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||||||||| | |||||| || ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19032002 |
agggaaatgctaaccggtgctccgggggcattagttaaggatatgaaaaaggaaattatatagtagtta |
19031934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 45431278 - 45431345
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||| || |||| || |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
45431278 |
agggaaatgctaaccggtgcccccagggc-ctgattaaggatatgaaaaaggaaattatatagtagtta |
45431345 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 549
Target Start/End: Original strand, 12306914 - 12306977
Alignment:
| Q |
486 |
taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatat |
549 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||| ||| |||| |||| ||||||||||||||||| |
|
|
| T |
12306914 |
taaagggaaatgctaaccggtgcctctggggctctagttaatgatacgaaaaagaaaattatat |
12306977 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 17333467 - 17333401
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17333467 |
gggaaatgctaaccggtgcccccggg-cactggttaaggatatgaaaaaggaaattatatagtagtta |
17333401 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 24178649 - 24178582
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||||| |||| |||||||||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
24178649 |
gggaaatgctaaccgatgcccccggggcactggttaaggatatgaaaaaggaaattatataatagtta |
24178582 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 486 - 557
Target Start/End: Complemental strand, 51368975 - 51368904
Alignment:
| Q |
486 |
taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||| |||||||||| ||||| ||| ||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
51368975 |
taaagggaaatgctaaccggtacctccagggtactggttaagggtatgaaaaaggaaattatatagtagtta |
51368904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 15227737 - 15227802
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| |||||||||| || | |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
15227737 |
aagggaaatgctaaccggtaccccgggggcactggttaaggatatgaaaaaggaaattatatagta |
15227802 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 13961211 - 13961278
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||||| |
|
|
| T |
13961211 |
agggaaatgctaaccggtgcccccggggcacgggttaaggatat-aaaaaaaaaattatatagtagtta |
13961278 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 557
Target Start/End: Original strand, 39497339 - 39497374
Alignment:
| Q |
522 |
attaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
39497339 |
attaaggatatgaaaaagaaaattatatagtagtta |
39497374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 479 - 557
Target Start/End: Complemental strand, 10976099 - 10976021
Alignment:
| Q |
479 |
aataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||| ||||| |||| |||||| ||| | |||||| ||||||||||||||||| | ||||||||||||||| |
|
|
| T |
10976099 |
aataattaaaaaggaaatgctagccggtgtctctgaggcacttgttaaggatatgaaaaaggagattatatagtagtta |
10976021 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 15282667 - 15282633
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
15282667 |
ttaaggatatgaaaaagaaaattatatagtagtta |
15282633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 19011180 - 19011115
Alignment:
| Q |
491 |
ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||| ||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19011180 |
ggaaatgctaaccggtgtc-ccggggcacgggttaaggatatgaaaaaggaaattatatagtagtta |
19011115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 29683193 - 29683263
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatat-gaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| |||| ||||| |||||| ||||||||||||||||| |
|
|
| T |
29683193 |
aagggaaatgctaaccggtgcccccggggcactggttaaagatataaaaaaaggaaattatatagtagtta |
29683263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 9266916 - 9266851
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| | ||||||||| | ||| |||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
9266916 |
aagggaaatgttaaccggtgtccccgcggcactggttaaggatatgaaaaaggaaattatatagta |
9266851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 14350465 - 14350396
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||| |||| |||| |||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
14350465 |
aagggaaatgctaaccggtgcccccggagcaccggttaagggtatgaaaaaggaaattatattgtagtta |
14350396 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 492 - 557
Target Start/End: Complemental strand, 38702117 - 38702052
Alignment:
| Q |
492 |
gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| |||||||||||| |||||||||| |||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
38702117 |
gaaatgctaaccggtgctcccggggcactggttaagggtatgaaaaaggaaactatatagtagtta |
38702052 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 549
Target Start/End: Complemental strand, 48383290 - 48383238
Alignment:
| Q |
497 |
gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatat |
549 |
Q |
| |
|
|||||||||||| |||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
48383290 |
gctaaccggtgctcccggggcactggttaaggatgtgaaaaagaaaattatat |
48383238 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 3784899 - 3784832
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| || || ||||||| || | ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3784899 |
gggaaatgcaaatcggtgcccccagtgcactggttaaggatatgaaaaaggaaattatatagtagtta |
3784832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 28481844 - 28481907
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||| ||||||||||||||| |||| || ||||||||||||||||| |||||||| |||| |
|
|
| T |
28481844 |
gggaaatgctaaccggtgcctcttgggccctggttaaggatatgaaaaaggaaattatacagta |
28481907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 30294567 - 30294500
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||| ||||| | |||| ||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30294567 |
gggaaatgctaatcggtgtccccggagcattggttaaggatatgaaaaaggaaattatatagtagtta |
30294500 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 3097692 - 3097726
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3097692 |
ttaaggatatgaaaaaggaaattatatagtagtta |
3097726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 488 - 549
Target Start/End: Complemental strand, 28726094 - 28726032
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggat-atgaaaaagaaaattatat |
549 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| |||||||| || |||||| ||||||||| |
|
|
| T |
28726094 |
aagggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaaggaaattatat |
28726032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 50128325 - 50128291
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| |
|
|
| T |
50128325 |
ttaaggatatgaaaaagaaaattacatagtagtta |
50128291 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 35985808 - 35985740
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| | ||||||||||| |||| |||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
35985808 |
aagggaaatgttaaccggtgcc-ccggatcactgtttaaggatataaaaaaggaaattatatagtagtta |
35985740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 48071482 - 48071549
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||||| ||| ||||||| ||| ||||||||||| ||||| |||||||||| |||||| |
|
|
| T |
48071482 |
agggaaatgctaaccgatgc-tccggggtactggttaaggatatgtaaaaggaaattatataatagtta |
48071549 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 26)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 477 - 557
Target Start/End: Original strand, 12525706 - 12525786
Alignment:
| Q |
477 |
acaataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
12525706 |
acaataatttaaagggaaatgctaaccggtgcctccggggtactggttaagggtatgaaaaaggaaattatatagtagtta |
12525786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 557
Target Start/End: Original strand, 3515759 - 3515833
Alignment:
| Q |
483 |
atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||| ||||||||||||| || ||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
3515759 |
atttaaagggaaatgctaaccggtgcccccagggcactggttaagggtatgaaaaaggaaattatatagtagtta |
3515833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 1391365 - 1391297
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||||| ||||||| ||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
1391365 |
aagggaaatgctaaccggtgc-tccggggtactgattaaggatatgaaaaaggaaattatatagtagtta |
1391297 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 7851347 - 7851282
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| ||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
7851347 |
aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaagaaaattatatagta |
7851282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 20897946 - 20898015
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||| || ||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
20897946 |
aagggaaatgctaaccggtgcccccagggcactggttaaggatatgaaaaaggaaattatatagtagtta |
20898015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 23402136 - 23402201
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
23402136 |
aagggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagta |
23402201 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 27433486 - 27433559
Alignment:
| Q |
484 |
tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
27433486 |
tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
27433559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 392096 - 392163
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
392096 |
gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
392163 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 21878533 - 21878466
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
21878533 |
gggaaatgctaaccggtgcctcccgggcacgggttaaggatatgaaaaaggaaattatatagtagtta |
21878466 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 23629761 - 23629695
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| | |||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23629761 |
gggaaatgttaaccgatgcc-ccggggcactgattaaggatatgaaaaagaaaattatatagtagtta |
23629695 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 557
Target Start/End: Original strand, 2350654 - 2350719
Alignment:
| Q |
492 |
gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| |||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2350654 |
gaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatatagtagtta |
2350719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 12145303 - 12145236
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| || | ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
12145303 |
gggaaatgctaaccggtgcccccagtgcacttgttaaggatatgaaaaaggaaattatatagtagtta |
12145236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 29978233 - 29978295
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
29978233 |
gggaaatgctaaccggtgcctccgga-cactagttaaggatatgaaaaaggaaattatatagta |
29978295 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 550
Target Start/End: Complemental strand, 32929699 - 32929634
Alignment:
| Q |
485 |
ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatata |
550 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||| | |||||| |||||||||| |||||||||| |
|
|
| T |
32929699 |
ttaaagggaaatgctaaccggtgcccccggggcaatggttaagggtatgaaaaaggaaattatata |
32929634 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 34396715 - 34396646
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||| || || ||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34396715 |
aagggaaatgctaaccggtgcccccaggacacaggttaaggatatgaaaaaggaaattatatagtagtta |
34396646 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 13529454 - 13529522
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||| |||||| ||||||||| |||||||| |||||||| ||||||||||||||||| |
|
|
| T |
13529454 |
agggaaatgctaacttgtgccttcggggcactggttaaggatgtgaaaaaggaaattatatagtagtta |
13529522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 29451301 - 29451234
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||| |||||||||||| ||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
29451301 |
agggaaatgctaactggtgcctccggg-caccggttaaggatatgaaaaaggaaattatatagtagtta |
29451234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 18276803 - 18276734
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| | |||| |||||| || ||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18276803 |
aaagggaaatgttaactggtgcc-cctgggcactggttaaggatatgaaaaaggaaattatatagtagtta |
18276734 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 4215693 - 4215762
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| | ||||||||||| |||||||||| ||||| |||||||||| |||||||||| |||||| |
|
|
| T |
4215693 |
aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagtta |
4215762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 14559920 - 14559989
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||||||| ||||| ||| ||||| ||||||||||| ||| |||||| |||||| |
|
|
| T |
14559920 |
aagggaaatgctaaccggtgccttcggggaactgattaaagatatgaaaaaagaaaatatataatagtta |
14559989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 31280320 - 31280388
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||||||||| ||| |||||| |||||| ||||||||| ||||||||||||||||| |
|
|
| T |
31280320 |
agggaaatgctaaccggtgctcccgaggcactgattaagagaatgaaaaaggaaattatatagtagtta |
31280388 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 13417124 - 13417081
Alignment:
| Q |
514 |
gggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
13417124 |
gggcactagttaaggatatgaaaaaggaaattatatattagtta |
13417081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 34477712 - 34477669
Alignment:
| Q |
514 |
gggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34477712 |
gggcactggttaaggatatgaaaaaggaaattatatagtagtta |
34477669 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 26467277 - 26467243
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26467277 |
ttaaggatatgaaaaaggaaattatatagtagtta |
26467243 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 500 - 557
Target Start/End: Complemental strand, 32985369 - 32985312
Alignment:
| Q |
500 |
aaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||| ||||||| | |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
32985369 |
aaccggtgccctcggggcattggttaaggatataaaaaaggaaattatatagtagtta |
32985312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 531
Target Start/End: Complemental strand, 34712312 - 34712271
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggata |
531 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||| |
|
|
| T |
34712312 |
gggaaatgctaaccggtgcctccggggcactggttaaggata |
34712271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 54; Significance: 1e-21; HSPs: 26)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 31390010 - 31390079
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31390010 |
aagggaaatgctaactggtgcctccggggcactagttaaggatatgaaaaaggaaattatatagtagtta |
31390079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 561707 - 561637
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
561707 |
aaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagtta |
561637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 30486208 - 30486277
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||| |||||| |||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30486208 |
aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagtta |
30486277 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 32361056 - 32360988
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||| |
|
|
| T |
32361056 |
agggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagtta |
32360988 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 34442719 - 34442651
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
34442719 |
aagggaaatgctaaccggtgcc-ccggggcacatgttaaggatatgaaaaagaagattatatagtagtta |
34442651 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 8969591 - 8969526
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||| ||||| | |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
8969591 |
gggaaatgctaaccagtgcccc--gggcactagttaaggatatgaaaaagaaaattatatagtagtta |
8969526 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 22887749 - 22887817
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||||| ||||||||||||| | |||||||||||||||| ||||||||||||||||| |
|
|
| T |
22887749 |
agggaaatgctaaccgatgcctccggggcagtggttaaggatatgaaaaaagaaattatatagtagtta |
22887817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 26891850 - 26891782
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||| ||||| |||| ||||||||||| |||||| |||||||||| |||||| |
|
|
| T |
26891850 |
agggaaatgctaaccggtgcccccgggacactgattaaggatataaaaaaggaaattatatattagtta |
26891782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 20552931 - 20552994
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||| ||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
20552931 |
gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagta |
20552994 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 488 - 559
Target Start/End: Complemental strand, 22068507 - 22068436
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttatg |
559 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22068507 |
aagggaaatgctaacaagtgcccccggggcactggttaaggatatgaaaaagggaattatatagtagttatg |
22068436 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 31438646 - 31438713
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||| |
|
|
| T |
31438646 |
gggaaatgctaaccggtgctcccggggcactggttaaggatatgaaaaaggaaattatacagtagtta |
31438713 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 44587902 - 44587969
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
44587902 |
gggaaatgctaaccggtgcccccggggcaccggttaaggatataaaaaaggaaattatatagtagtta |
44587969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 26387252 - 26387183
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||| |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26387252 |
aagggaaatgctaactggtgcctccgaagtacttgttaaggatatgaaaaaggaaattatatagtagtta |
26387183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 485 - 557
Target Start/End: Original strand, 2898067 - 2898138
Alignment:
| Q |
485 |
ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||| | ||||||||| | |||| |||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
2898067 |
ttaaagggaaatgttaaccggtgtc-ccggaacactggttaaggatatgaaaaagaaaattatatagtagtta |
2898138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 557
Target Start/End: Original strand, 4381802 - 4381862
Alignment:
| Q |
497 |
gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||| |||| ||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
4381802 |
gctaaccggtgcccccggtgcactggttaagggtatgaaaaaggaaattatatagtagtta |
4381862 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 27856584 - 27856515
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| | ||||||||||| |||||||||| ||||| |||||||||| |||||||||| |||||| |
|
|
| T |
27856584 |
aagggaaatgttaaccggtgcccccggggcactggttaagagtatgaaaaaggaaattatataatagtta |
27856515 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 38591062 - 38590993
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||| | | |||||||| ||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
38591062 |
aagggaaatgctaaccggtgtccctggggcactggttaagaatatgaaaaaggaaattatacagtagtta |
38590993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 6580188 - 6580256
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||| ||||| | |||||||| |||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
6580188 |
agggaaatgctaaccagtgccccgggggcactggttaagggtatgaaaaaggaaactatatagtagtta |
6580256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 558
Target Start/End: Complemental strand, 16807409 - 16807342
Alignment:
| Q |
492 |
gaaaggctaaccggtgcctccggggcactaattaaggatatg-aaaaagaaaattatatagtagttat |
558 |
Q |
| |
|
|||| ||||||||||||||||| |||| | |||||||| | ||||||||||||||||||||||||| |
|
|
| T |
16807409 |
gaaatgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttat |
16807342 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 558
Target Start/End: Complemental strand, 16846690 - 16846623
Alignment:
| Q |
492 |
gaaaggctaaccggtgcctccggggcactaattaaggatatg-aaaaagaaaattatatagtagttat |
558 |
Q |
| |
|
|||| ||||||||||||||||| |||| | |||||||| | ||||||||||||||||||||||||| |
|
|
| T |
16846690 |
gaaatgctaaccggtgcctccgaggcattggttaaggatgtttaaaaagaaaattatatagtagttat |
16846623 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 38296178 - 38296240
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||| ||||||||||| || |||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
38296178 |
gggaaatgctaaccggtgtctt-ggggcactggttaaagatatgaaaaagaaaattatatagta |
38296240 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 43637165 - 43637231
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| ||| | |||| ||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
43637165 |
gggaaatgctaaccggtgcc-ccgagacactggttaaggatatgaataaggaaattatatagtagtta |
43637231 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 5881250 - 5881284
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |
|
|
| T |
5881250 |
ttaaggatatgaaaaaggaaattatatagtagtta |
5881284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 516 - 557
Target Start/End: Complemental strand, 5093699 - 5093658
Alignment:
| Q |
516 |
gcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||||||| |||||| |||||||||| |
|
|
| T |
5093699 |
gcactagttaaggatatgaaaaaggaaattaaatagtagtta |
5093658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 32860100 - 32860165
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| | ||||||||||| | ||||||| |||||||||| |||||| ||||||||||||| |
|
|
| T |
32860100 |
aagggaaatgttaaccggtgccccgggggcacgggttaaggatataaaaaaggaaattatatagta |
32860165 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 479 - 520
Target Start/End: Complemental strand, 35851966 - 35851925
Alignment:
| Q |
479 |
aataatttaaagggaaaggctaaccggtgcctccggggcact |
520 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| |||||||||| |
|
|
| T |
35851966 |
aataattttaagggaaatgctaaccggtgcccccggggcact |
35851925 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 51; Significance: 7e-20; HSPs: 34)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 168463 - 168533
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
168463 |
aaagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
168533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 27988687 - 27988618
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
27988687 |
aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagtta |
27988618 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 28045989 - 28045920
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
28045989 |
aagggaaatgctaaccggtgcctccggggcactggttaaggatatgaaaaaggaaattatataatagtta |
28045920 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 43119216 - 43119284
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |
|
|
| T |
43119216 |
agggaaatgctaaccggtgccctcggggcactgattaaagatatgaaaaagaaaattatatagtagtta |
43119284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 557
Target Start/End: Original strand, 13643005 - 13643079
Alignment:
| Q |
483 |
atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||| ||||||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
13643005 |
atttaaaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagtta |
13643079 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 557
Target Start/End: Original strand, 13743430 - 13743504
Alignment:
| Q |
483 |
atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||| ||||||||||||| |||||||||| ||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
13743430 |
atttaaaggaaaatgctaaccggtgcccccggggcactggttaaggatacgaaaaaggaaattatatagtagtta |
13743504 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 4537932 - 4537863
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||| |
|
|
| T |
4537932 |
aagggaaatgctaaccggtgcctccggggcactggttaaggatataaaataggaaattatatagtagtta |
4537863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 4648193 - 4648261
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4648193 |
aagggaaatgctaaccggtgtc-ccggggcactgattaaggatatgaaaaaggaaattatatagtagtta |
4648261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 16394247 - 16394180
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||||| |
|
|
| T |
16394247 |
gggaaatgctaaccggtgcccccggggcactggttaaggatgtgaaaaagaaaattatataatagtta |
16394180 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 30675758 - 30675691
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
30675758 |
gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
30675691 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 557
Target Start/End: Complemental strand, 29444317 - 29444259
Alignment:
| Q |
499 |
taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
29444317 |
taaccggtgctcccggggcactgattaaggatatgaaaaaggaaattatatagtagtta |
29444259 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 10618016 - 10618085
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
10618016 |
aaggaaaatgctaaccggtgcctctagggcacaggttaaggatatgaaaaagaaaattatatagtagtta |
10618085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 492 - 557
Target Start/End: Complemental strand, 20831737 - 20831672
Alignment:
| Q |
492 |
gaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
20831737 |
gaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagtta |
20831672 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 33357317 - 33357248
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||| |||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
33357317 |
aagggaaatgctaactggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagtta |
33357248 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 11112638 - 11112706
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||| ||||| |||||| |||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
11112638 |
agggaaatgctaactggtgcatccgggacactggttaaggatatgaaaaaggaaattatatagtagtta |
11112706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 558
Target Start/End: Complemental strand, 36923841 - 36923781
Alignment:
| Q |
498 |
ctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttat |
558 |
Q |
| |
|
||||||| |||||||| |||||| |||||||||||||||||| |||||||||| ||||||| |
|
|
| T |
36923841 |
ctaaccgctgcctccgaggcactgattaaggatatgaaaaaggaaattatataatagttat |
36923781 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 12652630 - 12652697
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| | || ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
12652630 |
gggaaatgctaaccggtgcccctggagcactggttaaggatatgaaaaaggaaattatatagtagtta |
12652697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 34228682 - 34228745
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||| ||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
34228682 |
gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagta |
34228745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 9063239 - 9063171
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||| | |||| ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9063239 |
aagggaaatgctaaccggtgtc-ccggagcactggttaaggatatgaaaaaggaaattatatagtagtta |
9063171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 557
Target Start/End: Original strand, 16785077 - 16785153
Alignment:
| Q |
480 |
ataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||||| |||||||||||| ||| ||||||| |||||||||||||||| ||||||||||| ||||| |
|
|
| T |
16785077 |
ataattttaagggaaatgctaaccggtgc-tccagggcactggttaaggatatgaaaaaagaaattatatagcagtta |
16785153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 7304671 - 7304637
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
7304671 |
ttaaggatatgaaaaagaaaattatatagtagtta |
7304637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 16888728 - 16888663
Alignment:
| Q |
491 |
ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||| ||||||||||||| ||||| ||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
16888728 |
ggaaatgctaaccggtgcccccggg-cacaggttaaggatatgaaaaaggaaattatatagtagtta |
16888663 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 557
Target Start/End: Complemental strand, 42035154 - 42035100
Alignment:
| Q |
503 |
cggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
42035154 |
cggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagtta |
42035100 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 9278210 - 9278279
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||| |||||||| ||| |||| |||| |||||||||||| |||||||||| |||||| |
|
|
| T |
9278210 |
aagggaaatgctaactggtgcctcagggacactcgttaaagatatgaaaaaggaaattatataatagtta |
9278279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 16890643 - 16890599
Alignment:
| Q |
513 |
ggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
16890643 |
ggggcaccagttaaggatatgaaaaaggaaattatatagtagtta |
16890599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 557
Target Start/End: Original strand, 32113915 - 32113975
Alignment:
| Q |
497 |
gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||| |||||| | | | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
32113915 |
gctaaccggtgtctccggagtattggttaaggatatgaaaaaggaaattatatagtagtta |
32113975 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 517 - 557
Target Start/End: Original strand, 36730471 - 36730511
Alignment:
| Q |
517 |
cactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36730471 |
cactagttaaggatatgaaaaaggaaattatatagtagtta |
36730511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 2805446 - 2805379
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| | ||||| ||||| ||||| |||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
2805446 |
gggaaatgttaaccagtgcccccgggacactggttaaggatatgaaaaaggaaattatataatagtta |
2805379 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 37373206 - 37373272
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| |||| |||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
37373206 |
gggaaatgctaaccggtgcccccgga-cactggttaaggatatgaaaaaggaaattatataatagtta |
37373272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Complemental strand, 9537977 - 9537943
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |
|
|
| T |
9537977 |
ttaaggatatgaaaaaggaaattatatagtagtta |
9537943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 557
Target Start/End: Original strand, 21595848 - 21595913
Alignment:
| Q |
491 |
ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||| ||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||| ||||| |
|
|
| T |
21595848 |
ggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatataggagtta |
21595913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 40831310 - 40831344
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |
|
|
| T |
40831310 |
ttaaagatatgaaaaagaaaattatatagtagtta |
40831344 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 490 - 550
Target Start/End: Complemental strand, 39751658 - 39751597
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggat-atgaaaaagaaaattatata |
550 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| |||||||| || |||| |||||||||||| |
|
|
| T |
39751658 |
gggaaatgctaaccggtgcccccggggcactggttaaggataataaaaaggaaaattatata |
39751597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 3930419 - 3930352
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||| ||||||| ||||| ||||| |||| |||||||| || ||||||||||||||||| |
|
|
| T |
3930419 |
agggaaatgctaatcggtgcccccggg-cactagttaataatatgaaagaggaaattatatagtagtta |
3930352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 51; Significance: 7e-20; HSPs: 30)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 18014669 - 18014739
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| |||||| |||||| |||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18014669 |
aaagggaaatgctaactggtgcccccggggcactgattaaggatatgaaaaagtaaattatatagtagtta |
18014739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 40362768 - 40362699
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
40362768 |
aagggaaatgctaacccgtgcctccggggcactgattaaggatatgaaaaaagaaattatatagtagtta |
40362699 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 272219 - 272287
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
272219 |
agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagtta |
272287 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 557
Target Start/End: Original strand, 52520677 - 52520748
Alignment:
| Q |
486 |
taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
52520677 |
taaagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
52520748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 46352631 - 46352701
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||| |
|
|
| T |
46352631 |
aaagggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatacagtagtta |
46352701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 41304004 - 41304068
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||||||||||| |
|
|
| T |
41304004 |
agggaaatgctaaccggtgcctccggggcagtggttaaggatatgaaaaaggaaattatatagta |
41304068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 49893330 - 49893398
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
49893330 |
agggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatataatagtta |
49893398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 4168183 - 4168250
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||||||||||||||||| ||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
4168183 |
gggaaatgctaaccggtgcctccggggaactggttaaggatataaaaaaggaaattatatagtagtta |
4168250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 20923992 - 20924059
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
20923992 |
gggaaatgctaaccggtgcttccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
20924059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 39074419 - 39074486
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
39074419 |
gggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
39074486 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 43786871 - 43786938
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |||| | |||||||||| ||||||||||||||||| |
|
|
| T |
43786871 |
gggaaatgctaaccggtgcctccggggcactggttaatggtatgaaaaaggaaattatatagtagtta |
43786938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 858587 - 858656
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| || |||||||||| || | |||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
858587 |
aagggaaatgcaaaccggtgcccccagtgcactagttaaggatatgaaaaaggaaattatatagtagtta |
858656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 48725271 - 48725334
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||| ||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
48725271 |
gggaaatgctaaccggtgccccgggggcactggttaaggatatgaaaaaggaaattatatagta |
48725334 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 52246582 - 52246649
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||||||||||||||| |||||||||||| |||| |
|
|
| T |
52246582 |
gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaatgaaattatatagttgtta |
52246649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 11308398 - 11308329
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||| |||||| |||| ||||||||| |||||||| |||||||||| |||||| |
|
|
| T |
11308398 |
aagggaaatgctaaccggtgtttccgggacactgattaaggatgtgaaaaaggaaattatataatagtta |
11308329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 13159895 - 13159964
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||||| | |||| ||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13159895 |
aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagtta |
13159964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 558
Target Start/End: Original strand, 22248910 - 22248954
Alignment:
| Q |
514 |
gggcactaattaaggatatgaaaaagaaaattatatagtagttat |
558 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22248910 |
gggcactagttaaggatatgaaaaaggaaattatatagtagttat |
22248954 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 555
Target Start/End: Complemental strand, 49529434 - 49529390
Alignment:
| Q |
511 |
ccggggcactaattaaggatatgaaaaagaaaattatatagtagt |
555 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |||| |
|
|
| T |
49529434 |
ccggggcactgattaaggatatgaaaaagaaaattatatactagt |
49529390 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 557
Target Start/End: Complemental strand, 50395741 - 50395681
Alignment:
| Q |
497 |
gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||| ||||| |||| ||| |||||||||||||||||||||| |||||||| |
|
|
| T |
50395741 |
gctaaccggtgcccccgggacactggttagggatatgaaaaagaaaattatacagtagtta |
50395681 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 490 - 558
Target Start/End: Complemental strand, 51819061 - 51818993
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttat |
558 |
Q |
| |
|
|||||| |||||| | |||||| |||||||| |||||||||| |||||||||||||| |||||||||| |
|
|
| T |
51819061 |
gggaaatgctaactgatgcctctggggcactgattaaggatactaaaaagaaaattatttagtagttat |
51818993 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 557
Target Start/End: Complemental strand, 53490019 - 53489943
Alignment:
| Q |
483 |
atttaaagggaaaggctaaccggtgcctcc--ggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||| ||||| ||||||| || |||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
53490019 |
atttaatgggaaatgctaatcggtgcccccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
53489943 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 497 - 557
Target Start/End: Complemental strand, 41554118 - 41554059
Alignment:
| Q |
497 |
gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
41554118 |
gctaactggtgcc-ccggtgcactggttaaggatatgaaaaaggaaattatatagtagtta |
41554059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 10617469 - 10617403
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| | ||||||||||| |||| |||| ||||||||||| |||||| ||||||||||||||||| |
|
|
| T |
10617469 |
gggaaatgttaaccggtgcccccgga-cactgattaaggatataaaaaaggaaattatatagtagtta |
10617403 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 557
Target Start/End: Complemental strand, 42964426 - 42964368
Alignment:
| Q |
499 |
taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||||| ||||||||||| |||||||||||||||| ||||| ||||||||||| |
|
|
| T |
42964426 |
taactggtgcttccggggcactggttaaggatatgaaaaatgaaattttatagtagtta |
42964368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 557
Target Start/End: Complemental strand, 43269916 - 43269858
Alignment:
| Q |
499 |
taaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||||| ||| ||||| ||||||||||||||| | |||||| |||||||||| |
|
|
| T |
43269916 |
taaccggtgccttcggagcactggttaaggatatgaaaagggaaattacatagtagtta |
43269858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 52718200 - 52718234
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |
|
|
| T |
52718200 |
ttaaggatatgaaaaaggaaattatatagtagtta |
52718234 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 490 - 550
Target Start/End: Original strand, 2362801 - 2362861
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatata |
550 |
Q |
| |
|
|||||| |||||||||||| |||| ||| | ||||||||||||||||| |||||||||| |
|
|
| T |
2362801 |
gggaaatgctaaccggtgctcccggtgcaatggttaaggatatgaaaaaggaaattatata |
2362861 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 2391630 - 2391674
Alignment:
| Q |
513 |
ggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
2391630 |
ggggcactggttaaggataagaaaaaggaaattatatagtagtta |
2391674 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 2393391 - 2393435
Alignment:
| Q |
513 |
ggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
2393391 |
ggggcactggttaaggataagaaaaaggaaattatatagtagtta |
2393435 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Original strand, 29241660 - 29241704
Alignment:
| Q |
513 |
ggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| | ||||||||||||||| | ||||||||||||||||| |
|
|
| T |
29241660 |
ggggcaccagttaaggatatgaaaatggaaattatatagtagtta |
29241704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 13661802 - 13661875
Alignment:
| Q |
484 |
tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
13661802 |
tttaaagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagtagtta |
13661875 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 490 - 550
Target Start/End: Original strand, 6283562 - 6283622
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatata |
550 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
6283562 |
gggaaatgctaaccggtgcctccggggcactagttaaagatatgaaaaagaaaattatata |
6283622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 10069969 - 10070036
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10069969 |
gggaaatgctaaccggtgcccccggggcactggttaaggatatgaaaaaggaaattatatagtagtta |
10070036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 486 - 557
Target Start/End: Original strand, 35132518 - 35132589
Alignment:
| Q |
486 |
taaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||| ||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
35132518 |
taaagggaaatgctaaccggtgcccccgggacactggttaaggatatgaaaaaggaaattatatagtagtta |
35132589 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 19647846 - 19647777
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||| |||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
19647846 |
aaggaaaatgctaaccggtatctccggggcactggttaaggatatgaaaaaggaaattatatagtagtta |
19647777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 487 - 555
Target Start/End: Original strand, 13470148 - 13470216
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagt |
555 |
Q |
| |
|
||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||| |
|
|
| T |
13470148 |
aaagggaaatgctaaccggtgcctatggggcactggttaaggatatgaaaaaggaaataatatagtagt |
13470216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 35504426 - 35504359
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
35504426 |
gggaaatgctaaccggtgcccccgggacactggttaagggtatgaaaaaggaaattatatagtagtta |
35504359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 2619742 - 2619676
Alignment:
| Q |
491 |
ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||| |||||| |||| ||||||| |||| ||||||||||||||||||||||||| ||||||||| |
|
|
| T |
2619742 |
ggaaatgctaactggtgtctccgggacacttgttaaggatatgaaaaagaaaattatttagtagtta |
2619676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 488 - 550
Target Start/End: Complemental strand, 10054540 - 10054478
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatata |
550 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| |||||| |||||||||| |||||||||| |
|
|
| T |
10054540 |
aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatata |
10054478 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 479 - 557
Target Start/End: Complemental strand, 34651029 - 34650952
Alignment:
| Q |
479 |
aataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| |||||| ||||||||||||| ||||| |||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
34651029 |
aataatttattgggaaatgctaaccggtgcccccggg-cactggttaagggtatgaaaaaggaaattatatagtagtta |
34650952 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 557
Target Start/End: Original strand, 12506287 - 12506363
Alignment:
| Q |
481 |
taatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| | |||||| ||||||||||||||| || ||||| ||||| |||||||||| ||||||||||||||||| |
|
|
| T |
12506287 |
taattttatgggaaatgctaaccggtgcctctggagcactcgttaagagtatgaaaaaggaaattatatagtagtta |
12506363 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 550
Target Start/End: Complemental strand, 21945050 - 21944986
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggat-atgaaaaagaaaattatata |
550 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |||||||| || |||| |||||||||||| |
|
|
| T |
21945050 |
aaagggaaatgctaaccggtgcctccggggcactggttaaggataataaaaaggaaaattatata |
21944986 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 11958153 - 11958086
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| ||||||||| |||| ||||| |||||| ||||||||||||||||| |
|
|
| T |
11958153 |
gggaaatgctaaccggtgcccccggggcacaggttaaagatataaaaaaggaaattatatagtagtta |
11958086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 8787337 - 8787406
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||| | |||||||| | |||||| ||||||||| ||||||||||||||||| |
|
|
| T |
8787337 |
aagggaaatgctaaccggtgtccccggggcattggttaagggtatgaaaaatgaaattatatagtagtta |
8787406 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 39069379 - 39069447
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||||| ||| ||||||| |||||| |||| ||||| ||||||||||||||||| |
|
|
| T |
39069379 |
aagggaaatgctaaccggtgcttccagggcactggttaagggtatg-aaaaggaaattatatagtagtta |
39069447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 522 - 557
Target Start/End: Original strand, 40057339 - 40057374
Alignment:
| Q |
522 |
attaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |
|
|
| T |
40057339 |
attaaggatatgaaaaaggaaattatatagtagtta |
40057374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 557
Target Start/End: Complemental strand, 40564594 - 40564523
Alignment:
| Q |
484 |
tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||||||| ||||||||||| |||||| || ||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
40564594 |
tttatagggaaatgctaaccggtg--tccgggacatcgattaaggatttgaaaaaggaaattatatagtagtta |
40564523 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 4837256 - 4837320
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| | ||||||||||| ||||||||| ||||| ||||||||||| ||||||||||||| |
|
|
| T |
4837256 |
aagggaaatgttaaccggtgcc-ccggggcaccggttaagaatatgaaaaaggaaattatatagta |
4837320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 497 - 557
Target Start/End: Original strand, 11846079 - 11846139
Alignment:
| Q |
497 |
gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||| ||||| | ||||| ||||| ||||||||| |||||| ||||||||||||||||| |
|
|
| T |
11846079 |
gctaagcggtgtccccgggacactagctaaggatataaaaaaggaaattatatagtagtta |
11846139 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 50; Significance: 3e-19; HSPs: 32)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 557
Target Start/End: Original strand, 4089136 - 4089209
Alignment:
| Q |
484 |
tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||||||| ||||||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4089136 |
tttatagggaaatgctaaccggtgcccctggggcactgattaagggtatgaaaaagaaaattatatagtagtta |
4089209 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 43944505 - 43944574
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
43944505 |
aagggaaatgctaaccggtgcctccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
43944574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 15186240 - 15186310
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
15186240 |
aaagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
15186310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 483 - 557
Target Start/End: Original strand, 16536041 - 16536115
Alignment:
| Q |
483 |
atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| |||||||| ||||||||||||| ||||||||| ||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
16536041 |
attttaagggaaatgctaaccggtgcccccggggcacggattaagggtatgaaaaaggaaattatatagtagtta |
16536115 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 557
Target Start/End: Complemental strand, 18068071 - 18067998
Alignment:
| Q |
484 |
tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
18068071 |
tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
18067998 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 43202571 - 43202506
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||| |||||| |||||||||| ||||||||||||| |
|
|
| T |
43202571 |
aagggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaattatatagta |
43202506 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 54897308 - 54897375
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||||| |
|
|
| T |
54897308 |
gggaaatgctaaccggtgcccccggggcactggttaaggatatgagaaaggaaattatatagtagtta |
54897375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 789719 - 789649
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
789719 |
aaagggaaatgctaaccggtgcccccggggcacgggttaagggtatgaaaaaggaaattatatagtagtta |
789649 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 557
Target Start/End: Complemental strand, 52533981 - 52533904
Alignment:
| Q |
480 |
ataatttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||||||||||| | |||||||||||||| || |||| ||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
52533981 |
ataaattaaagggaaatgttaaccggtgcctccaggacactggttaagaatatgaaaaaggaaattatatagtagtta |
52533904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 4269009 - 4268941
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||| |||||||||| |||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
4269009 |
agggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaactatatagtagtta |
4268941 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 497 - 557
Target Start/End: Original strand, 50619093 - 50619153
Alignment:
| Q |
497 |
gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||| |||||||||| |||||| ||||||||||||||||||||||||||||| |
|
|
| T |
50619093 |
gctaactggtgctcccggggcactgattaagaatatgaaaaagaaaattatatagtagtta |
50619153 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 55882683 - 55882746
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| |||||||||||||||| |||||||||||||| |
|
|
| T |
55882683 |
agggaaatgctaaccggtgtctccggggcactcgttaaggatatgaaaaa-aaaattatatagta |
55882746 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 32217045 - 32217112
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||| |||||| |||||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
32217045 |
gggaaatgctaactggtgcccccggggcactggttaaggatataaaaaaggaaattatatagtagtta |
32217112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 7768935 - 7769005
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||||| |||| || |||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
7768935 |
aaagggaaatgctaatcggtacccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
7769005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 29591186 - 29591256
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| |||||| |||||| |||||||||| ||||| ||||||| ||| ||||||||||||||||| |
|
|
| T |
29591186 |
aaagggaaatgctaactggtgcccccggggcactggttaagaatatgaataaggaaattatatagtagtta |
29591256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 47232061 - 47231991
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| ||||||||||||| |||| ||||| |||||||| |||||||| |||||||||| |||||| |
|
|
| T |
47232061 |
aaagggaaatgctaaccggtgcccccggagcactggttaaggatgtgaaaaaggaaattatataatagtta |
47231991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 33108860 - 33108792
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| | |||||||||||||||||||||| |||| |||||||||||| |||||||||| |||||| |
|
|
| T |
33108860 |
aagggaaatgttaaccggtgcctccggggcactggttaa-gatatgaaaaaggaaattatataatagtta |
33108792 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 3783687 - 3783620
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |
|
|
| T |
3783687 |
gggaaatgctaaccggtgcctccggggcaccggttaaacatatgaaaaatgaaattatatagtagtta |
3783620 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 24679827 - 24679761
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||| ||| |||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
24679827 |
gggaaatgctaaccggtgtctc-ggggcactggttaaggatatgaaaaaagaaattatatagtagtta |
24679761 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 28755621 - 28755687
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||| | || ||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
28755621 |
gggaaatgctaaccggtgtc-ccagggcactggttaaggatatgaaaaaggaaattatatagtagtta |
28755687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 483 - 557
Target Start/End: Complemental strand, 42898939 - 42898865
Alignment:
| Q |
483 |
atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||| ||||||| | ||| |||||| ||| ||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
42898939 |
atttatagggaaatgttaatcggtgcttccagggcactggttaaggatataaaaaaggaaattatatagtagtta |
42898865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 12356242 - 12356311
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||| | | | ||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
12356242 |
aagggaaatgctaaccggtgcccctgagatactggttaaggatatgaaaaaggaaattatatagtagtta |
12356311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 553
Target Start/End: Original strand, 49915158 - 49915222
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
||||||| || |||||| ||| | || ||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
49915158 |
agggaaatgcaaaccggcgcccctggtgcactgattaaggatatgaaaaagaaatttatatagta |
49915222 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 4220195 - 4220262
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| | |||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4220195 |
gggaaatgataaccgatgccttcggggtacgggttaaggatatgaaaaaggaaattatatagtagtta |
4220262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 32202666 - 32202599
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| | ||||||||| | ||||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
32202666 |
gggaaatgttaaccggtgtccccggggcacgggttaaggatataaaaaaggaaattatatagtagtta |
32202599 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 54054548 - 54054615
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| | ||||||| |||||||||||||||| |||||||||| |||||| |
|
|
| T |
54054548 |
gggaaatgctaaccggtgccccgggggcaccggttaaggatatgaaaaaagaaattatataatagtta |
54054615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 489 - 531
Target Start/End: Complemental strand, 10110189 - 10110147
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggata |
531 |
Q |
| |
|
||||||| ||||||||||||||||||| |||| |||||||||| |
|
|
| T |
10110189 |
agggaaatgctaaccggtgcctccgggacactgattaaggata |
10110147 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 19503289 - 19503224
Alignment:
| Q |
491 |
ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||| |||||||||||| ||| ||| ||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
19503289 |
ggaaatgctaaccggtgc-tcccgggtactggttaaggatatgaaaaaggaaattatatactagtta |
19503224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 511 - 557
Target Start/End: Complemental strand, 30154327 - 30154282
Alignment:
| Q |
511 |
ccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||||| ||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
30154327 |
ccggggcactagttaag-atatgaaaaaggaaattatatagtagtta |
30154282 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 523 - 557
Target Start/End: Original strand, 52697085 - 52697119
Alignment:
| Q |
523 |
ttaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |
|
|
| T |
52697085 |
ttaaggatatgaaaaacaaaattatatagtagtta |
52697119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 54656039 - 54655995
Alignment:
| Q |
513 |
ggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
54656039 |
ggggcactggttaaggatataaaaaaggaaattatatagtagtta |
54655995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 513 - 557
Target Start/End: Complemental strand, 54945941 - 54945897
Alignment:
| Q |
513 |
ggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||||||||| ||||| |
|
|
| T |
54945941 |
ggggcactggttaaggatatgaaaaaggaaattatatagcagtta |
54945897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0524 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0524
Description:
Target: scaffold0524; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 825 - 892
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
825 |
gggaaatgctagccggtgcttccggagcactagttaaggatatgaaaaagaaaattatatagtagtta |
892 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 557
Target Start/End: Complemental strand, 53877 - 53804
Alignment:
| Q |
484 |
tttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||||||| |
|
|
| T |
53877 |
tttatagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagtagtta |
53804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0045 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 50548 - 50615
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| | |||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |
|
|
| T |
50548 |
gggaaatgttaaccggtgcctccggggcactggttaaagatatgaaaaaggaaattatatagtagtta |
50615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 25)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 24438477 - 24438544
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| ||||||||||| |||||| |||||||||| ||| ||||||||||||| |
|
|
| T |
24438477 |
gggaaatgctaaccggtgcccccggggcactagttaagggtatgaaaaaggaaactatatagtagtta |
24438544 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 34606261 - 34606324
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
34606261 |
gggaaatgctaactggtgcctccggggcactggttaaggatatgaaaaaggaaattatatagta |
34606324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 29993676 - 29993606
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| |||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
29993676 |
aaagggaaatgctaacgggtgcccccggggcaccggttaaggatatgaaaaaggaaattatatagtagtta |
29993606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 491 - 553
Target Start/End: Original strand, 47656981 - 47657043
Alignment:
| Q |
491 |
ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
||||| |||||||||||| || |||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
47656981 |
ggaaatgctaaccggtgcttcgggggcactggttaaggatatgaaaaagaaaattatatagta |
47657043 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 12218624 - 12218555
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| |||| ||||||||||| ||||||||||||||||| |
|
|
| T |
12218624 |
aagggaaatgctaaccggtgcccccggggcactggataagtatatgaaaaaggaaattatatagtagtta |
12218555 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 497 - 558
Target Start/End: Original strand, 28262038 - 28262099
Alignment:
| Q |
497 |
gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagttat |
558 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
28262038 |
gctaaccggtgcctccgggtcaccggttaaggatatgaaaaaggaaattatatagtagttat |
28262099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 34333282 - 34333347
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||| |
|
|
| T |
34333282 |
aagggaaatgctaaccggtgcccccggggcactggttaagggtatgaaaaaggaaattatatagta |
34333347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 5239284 - 5239352
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||||||||||||||| ||||| |||| | |||||||||| ||||||||||||||||| |
|
|
| T |
5239284 |
agggaaatgctaaccggtgcctccggagcactggttaatggtatgaaaaaggaaattatatagtagtta |
5239352 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 487 - 557
Target Start/End: Original strand, 4628563 - 4628633
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| |||||||| |||| | ||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4628563 |
aaagggaaatgctaaccgatgcccctggggcaccggttaaggatatgaaaaaggaaattatatagtagtta |
4628633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 18485959 - 18486024
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
18485959 |
aagggaaatgctaaccggtgcccccggggcactggttaaggatattgaaaaggaaattatatagta |
18486024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 24798590 - 24798522
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| ||||||||||||| ||||| |||| || |||||||||||||| ||||||||||||||||| |
|
|
| T |
24798590 |
aagggaaatgctaaccggtgcccccggg-cacttgttgaggatatgaaaaaggaaattatatagtagtta |
24798522 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 1736980 - 1737047
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||||||||||| || |||||||| |||||||||||||||| |||||||||| |||||| |
|
|
| T |
1736980 |
gggaaatgctaaccggtgcttctggggcactggttaaggatatgaaaaatgaaattatataatagtta |
1737047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 511 - 557
Target Start/End: Original strand, 30810676 - 30810722
Alignment:
| Q |
511 |
ccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30810676 |
ccggggcactggttaaggatatgaaaaaggaaattatatagtagtta |
30810722 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 487 - 557
Target Start/End: Complemental strand, 34546503 - 34546433
Alignment:
| Q |
487 |
aaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||||| |||||||| |||| ||| || || ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34546503 |
aaagggaaatgctaaccgatgcccccgaggtaccggttaaggatatgaaaaaggaaattatatagtagtta |
34546433 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 557
Target Start/End: Original strand, 22973593 - 22973665
Alignment:
| Q |
485 |
ttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| |||| |||||| |||||||||||||||| |||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
22973593 |
ttaaagagaaatgctaactagtgcctccggggcactggttaatgatataaaaaaagaaattatatagtagtta |
22973665 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 23357894 - 23357826
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| | |||||||| |||| || | ||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
23357894 |
agggaaatgttaaccggttcctctggagtactcgttaaggatatgaaaaagaaaattgtatagtagtta |
23357826 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 491 - 555
Target Start/End: Original strand, 28587911 - 28587974
Alignment:
| Q |
491 |
ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagt |
555 |
Q |
| |
|
||||| ||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
28587911 |
ggaaatgctaaccggtgcccccgga-cactggttaaggatatgaaaaaggaaattatatagtagt |
28587974 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Complemental strand, 8754771 - 8754704
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||||| || ||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
8754771 |
gggaaatgctaaccggtgccctgggagcactggttaaggatatgaaaaatgaaattatatagtagtta |
8754704 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 545
Target Start/End: Complemental strand, 47118150 - 47118095
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaatt |
545 |
Q |
| |
|
|||||| |||||| ||||||||||||||||| |||| |||||||||||| ||||| |
|
|
| T |
47118150 |
gggaaatgctaactggtgcctccggggcactggttaaagatatgaaaaaggaaatt |
47118095 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 483 - 545
Target Start/End: Complemental strand, 7689393 - 7689331
Alignment:
| Q |
483 |
atttaaagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaatt |
545 |
Q |
| |
|
||||||||||||| | ||||||||| ||| ||| |||| ||||||||||| |||||| ||||| |
|
|
| T |
7689393 |
atttaaagggaaatgttaaccggtgtctctgggacactgattaaggatataaaaaaggaaatt |
7689331 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 5729344 - 5729413
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| | ||||||||| |||| ||||| ||||||||||||||||| |||||||||| |||||| |
|
|
| T |
5729344 |
aagggaaatgttaaccggtgttcccggagcactggttaaggatatgaaaaaggaaattatataatagtta |
5729413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 497 - 557
Target Start/End: Complemental strand, 11686503 - 11686443
Alignment:
| Q |
497 |
gctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||| |||||| ||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
11686503 |
gctaactggtgcttccgggatactggttaaggatataaaaaaggaaattatatagtagtta |
11686443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 531
Target Start/End: Original strand, 19434502 - 19434534
Alignment:
| Q |
499 |
taaccggtgcctccggggcactaattaaggata |
531 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
19434502 |
taaccggtgcctccggggcactgattaaggata |
19434534 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Complemental strand, 27456299 - 27456232
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||| |||||| ||||| |||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
27456299 |
agggaaatgctaactggtgcccccggg-cactggttaaggatatggaaaaagaaattatatagtagtta |
27456232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 47839492 - 47839559
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||| | |||||| ||| ||||||||||||||||| || ||||||| |||||| |
|
|
| T |
47839492 |
agggaaatgctaaccggtgtc-ccggggtactggttaaggatatgaaaaaggaatttatataatagtta |
47839559 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0264 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0264
Description:
Target: scaffold0264; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 22959 - 23024
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagta |
553 |
Q |
| |
|
|||||||| ||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
22959 |
aagggaaatgctaaccggtgcccccggagcactggttaaggatatgaaaaaggaaattatatagta |
23024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 68478 - 68409
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||| |||||| |||||||||| |||||||||||||||| ||||||||||||||||| |
|
|
| T |
68478 |
aagggaaatgctaactggtgcccccggggcactggttaaggatatgaaaaatgaaattatatagtagtta |
68409 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0188 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0188
Description:
Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 491 - 557
Target Start/End: Complemental strand, 6295 - 6229
Alignment:
| Q |
491 |
ggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||| ||||||||||||| | |||||||| ||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
6295 |
ggaaatgctaaccggtgcccctggggcactggttaaggatatgaaaaaggaaactatatagtagtta |
6229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Original strand, 116202 - 116271
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||| ||| ||||||||||||| ||||||||| |||| |||||||||||| ||||||||||||||||| |
|
|
| T |
116202 |
aaggaaaatgctaaccggtgcccccggggcacaggttaaagatatgaaaaaggaaattatatagtagtta |
116271 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 557
Target Start/End: Complemental strand, 147093 - 147024
Alignment:
| Q |
488 |
aagggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||||| |||||||||||| | |||| ||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
147093 |
aagggaaatgctaaccggtgctcctggggttctagttaaggatatgaaaaaggaaattatatagtagtta |
147024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1266 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1266
Description:
Target: scaffold1266; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 292 - 359
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| |||||||||||| || ||||||| ||||| |||||||||||||||||||||| |||||| |
|
|
| T |
292 |
agggaaatcctaaccggtgcc-ccagggcactggttaagcatatgaaaaagaaaattatataatagtta |
359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0674 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0674
Description:
Target: scaffold0674; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Complemental strand, 8059 - 8016
Alignment:
| Q |
514 |
gggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
8059 |
gggcactggttaaggatatgaaaaaggaaattatatagtagtta |
8016 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0549 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0549
Description:
Target: scaffold0549; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Original strand, 7312 - 7355
Alignment:
| Q |
514 |
gggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7312 |
gggcactggttaaggatatgaaaaaggaaattatatagtagtta |
7355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0190 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0190
Description:
Target: scaffold0190; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 490 - 557
Target Start/End: Original strand, 14896 - 14963
Alignment:
| Q |
490 |
gggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
|||||| ||||||||||| | |||||||||| |||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
14896 |
gggaaatgctaaccggtgtccccggggcactggttaaagatataaaaaaagaaattatatagtagtta |
14963 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0050 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 557
Target Start/End: Original strand, 69250 - 69293
Alignment:
| Q |
514 |
gggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
69250 |
gggcactcgttaaggatatgaaaaagtaaattatatagtagtta |
69293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1152 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold1152
Description:
Target: scaffold1152; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 489 - 557
Target Start/End: Original strand, 677 - 745
Alignment:
| Q |
489 |
agggaaaggctaaccggtgcctccggggcactaattaaggatatgaaaaagaaaattatatagtagtta |
557 |
Q |
| |
|
||||||| ||||| ||||||| || | |||| |||| |||||||||||| ||||||||||||||||| |
|
|
| T |
677 |
agggaaatgctaatcggtgcccccagagcacgggttaaagatatgaaaaaggaaattatatagtagtta |
745 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University