View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1139_low_81 (Length: 397)

Name: NF1139_low_81
Description: NF1139
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1139_low_81
NF1139_low_81
[»] chr1 (34 HSPs)
chr1 (178-390)||(5279186-5279413)
chr1 (30-138)||(5279127-5279235)
chr1 (178-230)||(32944754-32944806)
chr1 (178-230)||(42045363-42045415)
chr1 (182-230)||(16307671-16307719)
chr1 (182-230)||(29987103-29987151)
chr1 (144-180)||(37600954-37600990)
chr1 (182-230)||(43356457-43356505)
chr1 (186-229)||(12212321-12212364)
chr1 (178-228)||(2994776-2994826)
chr1 (178-228)||(18166620-18166670)
chr1 (184-230)||(32950752-32950798)
chr1 (136-177)||(48558310-48558352)
chr1 (136-177)||(52846838-52846880)
chr1 (177-230)||(64669-64722)
chr1 (177-230)||(1794613-1794666)
chr1 (178-223)||(25532991-25533036)
chr1 (186-230)||(3481587-3481631)
chr1 (182-230)||(8269359-8269407)
chr1 (178-230)||(8736453-8736505)
chr1 (178-230)||(9265827-9265879)
chr1 (184-228)||(12268977-12269021)
chr1 (182-230)||(16033441-16033489)
chr1 (182-230)||(17139508-17139556)
chr1 (182-230)||(22335380-22335428)
chr1 (178-222)||(26803450-26803494)
chr1 (182-230)||(27533265-27533313)
chr1 (183-227)||(28006765-28006809)
chr1 (179-231)||(28712526-28712577)
chr1 (178-230)||(28832162-28832214)
chr1 (182-230)||(32923840-32923888)
chr1 (178-230)||(34521181-34521233)
chr1 (178-230)||(40227847-40227899)
chr1 (178-230)||(45139997-45140049)
[»] chr8 (26 HSPs)
chr8 (178-230)||(29376919-29376971)
chr8 (178-230)||(7996958-7997010)
chr8 (179-230)||(27718885-27718936)
chr8 (182-231)||(11709008-11709057)
chr8 (178-230)||(12748919-12748971)
chr8 (178-230)||(12800891-12800943)
chr8 (178-230)||(19163527-19163579)
chr8 (178-230)||(32944831-32944883)
chr8 (179-230)||(6038266-6038317)
chr8 (182-228)||(8461829-8461875)
chr8 (136-177)||(15011018-15011060)
chr8 (178-227)||(8137953-8138002)
chr8 (177-230)||(11603828-11603881)
chr8 (181-230)||(32051523-32051572)
chr8 (183-220)||(32223880-32223917)
chr8 (182-223)||(32944947-32944988)
chr8 (182-230)||(2489702-2489750)
chr8 (178-218)||(6447207-6447247)
chr8 (178-230)||(9192218-9192270)
chr8 (182-230)||(20665354-20665402)
chr8 (178-230)||(23093343-23093395)
chr8 (186-230)||(24338195-24338239)
chr8 (179-231)||(26991747-26991799)
chr8 (182-230)||(30550717-30550765)
chr8 (144-180)||(31767062-31767098)
chr8 (182-230)||(44215466-44215514)
[»] chr7 (28 HSPs)
chr7 (178-230)||(3671842-3671894)
chr7 (178-229)||(19599163-19599214)
chr7 (182-231)||(19036092-19036141)
chr7 (182-231)||(20718495-20718544)
chr7 (182-230)||(5579715-5579763)
chr7 (178-230)||(27462427-27462479)
chr7 (178-230)||(30857266-30857318)
chr7 (183-230)||(2402497-2402544)
chr7 (144-179)||(34590610-34590645)
chr7 (183-230)||(46849098-46849145)
chr7 (181-228)||(47342427-47342474)
chr7 (177-227)||(37516796-37516846)
chr7 (136-181)||(41670906-41670952)
chr7 (144-178)||(43167881-43167915)
chr7 (178-219)||(5041357-5041398)
chr7 (181-230)||(10026015-10026064)
chr7 (178-219)||(23413048-23413089)
chr7 (182-231)||(48629055-48629104)
chr7 (136-179)||(6783111-6783155)
chr7 (178-230)||(7735548-7735600)
chr7 (178-230)||(19416532-19416584)
chr7 (182-230)||(20763176-20763224)
chr7 (182-230)||(27833392-27833440)
chr7 (182-230)||(29488742-29488790)
chr7 (178-230)||(31038513-31038565)
chr7 (182-230)||(33232388-33232436)
chr7 (182-230)||(34284530-34284578)
chr7 (178-230)||(45088894-45088945)
[»] chr6 (20 HSPs)
chr6 (178-228)||(20744156-20744206)
chr6 (177-230)||(27080795-27080848)
chr6 (178-230)||(4455587-4455639)
chr6 (181-230)||(9367422-9367471)
chr6 (182-230)||(788888-788936)
chr6 (178-230)||(8569727-8569779)
chr6 (178-230)||(9977075-9977127)
chr6 (182-230)||(12582220-12582268)
chr6 (179-227)||(13496135-13496183)
chr6 (176-219)||(26357943-26357986)
chr6 (183-230)||(27080689-27080736)
chr6 (182-228)||(14918293-14918339)
chr6 (184-230)||(15155759-15155805)
chr6 (182-230)||(247681-247729)
chr6 (182-222)||(7082991-7083031)
chr6 (178-230)||(8629687-8629739)
chr6 (182-230)||(12232173-12232221)
chr6 (183-231)||(23629827-23629875)
chr6 (182-230)||(27834361-27834409)
chr6 (178-230)||(29740500-29740552)
[»] chr4 (34 HSPs)
chr4 (178-230)||(11949754-11949806)
chr4 (182-230)||(38374979-38375027)
chr4 (177-231)||(47015558-47015612)
chr4 (178-230)||(9946445-9946497)
chr4 (179-231)||(19479467-19479519)
chr4 (178-230)||(21114296-21114348)
chr4 (182-230)||(21318244-21318292)
chr4 (183-231)||(22630350-22630398)
chr4 (182-230)||(24079831-24079879)
chr4 (178-230)||(27537766-27537817)
chr4 (178-230)||(43034333-43034385)
chr4 (177-228)||(6610280-6610331)
chr4 (188-230)||(17729454-17729496)
chr4 (184-230)||(22164260-22164306)
chr4 (184-230)||(37930838-37930884)
chr4 (182-223)||(13121566-13121607)
chr4 (182-223)||(14577505-14577546)
chr4 (178-231)||(16304088-16304141)
chr4 (178-223)||(16431634-16431679)
chr4 (178-227)||(40070962-40071011)
chr4 (179-228)||(43374265-43374314)
chr4 (182-230)||(10261760-10261808)
chr4 (178-222)||(20383506-20383550)
chr4 (182-230)||(21562647-21562695)
chr4 (178-230)||(23247589-23247641)
chr4 (178-230)||(24664982-24665034)
chr4 (182-230)||(26926701-26926749)
chr4 (182-230)||(29908078-29908126)
chr4 (178-230)||(32180848-32180900)
chr4 (136-179)||(33797097-33797140)
chr4 (182-230)||(43330168-43330216)
chr4 (182-230)||(47806247-47806295)
chr4 (182-230)||(51450234-51450282)
chr4 (178-210)||(52270041-52270073)
[»] chr3 (31 HSPs)
chr3 (178-230)||(25441491-25441543)
chr3 (182-230)||(14030726-14030774)
chr3 (178-230)||(25727958-25728010)
chr3 (178-230)||(26768419-26768471)
chr3 (182-230)||(34899119-34899167)
chr3 (178-230)||(38130950-38131002)
chr3 (179-230)||(7827527-7827578)
chr3 (177-220)||(52172788-52172831)
chr3 (182-228)||(1111834-1111880)
chr3 (178-227)||(2186421-2186470)
chr3 (181-230)||(32843253-32843302)
chr3 (144-177)||(37058760-37058793)
chr3 (182-223)||(38630109-38630150)
chr3 (178-231)||(39779042-39779095)
chr3 (136-180)||(44574009-44574054)
chr3 (182-230)||(916461-916509)
chr3 (178-218)||(977944-977984)
chr3 (182-230)||(7464482-7464530)
chr3 (182-230)||(8238586-8238634)
chr3 (178-230)||(10498686-10498738)
chr3 (178-230)||(25340915-25340967)
chr3 (182-230)||(27185499-27185547)
chr3 (186-230)||(29164744-29164788)
chr3 (178-230)||(29631204-29631256)
chr3 (178-230)||(37364420-37364472)
chr3 (182-230)||(44075147-44075195)
chr3 (178-222)||(46483265-46483309)
chr3 (182-230)||(48234444-48234492)
chr3 (179-219)||(49975807-49975847)
chr3 (136-179)||(50692599-50692643)
chr3 (178-210)||(53996317-53996349)
[»] chr2 (34 HSPs)
chr2 (179-230)||(9547400-9547451)
chr2 (183-230)||(17142853-17142900)
chr2 (177-230)||(12599856-12599909)
chr2 (181-230)||(23407009-23407058)
chr2 (136-177)||(29923372-29923413)
chr2 (178-231)||(34977222-34977275)
chr2 (178-231)||(41859870-41859923)
chr2 (178-230)||(660813-660865)
chr2 (178-230)||(2256989-2257041)
chr2 (182-230)||(24592837-24592885)
chr2 (178-230)||(25612284-25612336)
chr2 (182-230)||(31815878-31815926)
chr2 (187-230)||(15447705-15447748)
chr2 (178-228)||(8781643-8781693)
chr2 (184-230)||(29896285-29896331)
chr2 (182-231)||(3197070-3197118)
chr2 (181-230)||(22558998-22559047)
chr2 (144-177)||(31761413-31761446)
chr2 (178-210)||(833080-833112)
chr2 (182-230)||(3708715-3708763)
chr2 (178-210)||(4122024-4122056)
chr2 (178-230)||(7350564-7350616)
chr2 (178-230)||(11175803-11175855)
chr2 (182-230)||(11868653-11868701)
chr2 (178-230)||(15503147-15503199)
chr2 (182-230)||(20565066-20565114)
chr2 (182-230)||(22267535-22267582)
chr2 (182-230)||(29544649-29544697)
chr2 (179-227)||(29734710-29734758)
chr2 (178-230)||(31543030-31543082)
chr2 (182-230)||(35360046-35360094)
chr2 (182-230)||(36013920-36013968)
chr2 (178-230)||(36264470-36264522)
chr2 (178-230)||(44526146-44526198)
[»] scaffold0334 (1 HSPs)
scaffold0334 (178-230)||(5200-5252)
[»] scaffold0050 (1 HSPs)
scaffold0050 (182-230)||(53371-53419)
[»] scaffold0025 (1 HSPs)
scaffold0025 (178-230)||(64236-64288)
[»] chr5 (23 HSPs)
chr5 (182-230)||(6489029-6489077)
chr5 (182-230)||(15889433-15889481)
chr5 (178-230)||(22522792-22522844)
chr5 (178-230)||(39980526-39980578)
chr5 (181-228)||(24408516-24408563)
chr5 (179-230)||(40715940-40715991)
chr5 (136-181)||(24994142-24994188)
chr5 (144-177)||(4465174-4465207)
chr5 (182-223)||(5846051-5846092)
chr5 (178-231)||(16089468-16089521)
chr5 (178-227)||(18489070-18489119)
chr5 (144-177)||(20720344-20720377)
chr5 (178-231)||(20721068-20721121)
chr5 (179-220)||(39610342-39610383)
chr5 (182-230)||(8544980-8545028)
chr5 (184-228)||(12218278-12218322)
chr5 (178-230)||(12611026-12611078)
chr5 (178-230)||(13864362-13864414)
chr5 (182-230)||(16701572-16701620)
chr5 (178-230)||(30843393-30843445)
chr5 (182-230)||(32200438-32200486)
chr5 (182-230)||(37462133-37462181)
chr5 (178-230)||(41650931-41650982)
[»] scaffold0350 (1 HSPs)
scaffold0350 (179-230)||(1267-1318)
[»] scaffold0005 (1 HSPs)
scaffold0005 (182-223)||(239829-239870)
[»] scaffold0259 (1 HSPs)
scaffold0259 (178-230)||(5431-5483)
[»] scaffold0122 (1 HSPs)
scaffold0122 (178-230)||(14177-14229)
[»] scaffold0021 (1 HSPs)
scaffold0021 (178-230)||(161159-161211)
[»] scaffold0016 (1 HSPs)
scaffold0016 (182-230)||(99059-99107)


Alignment Details
Target: chr1 (Bit Score: 125; Significance: 3e-64; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 178 - 390
Target Start/End: Complemental strand, 5279413 - 5279186
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccatnnnnnnntacaattattccaccgattcgaaaaagaaaatcttgcat 277  Q
    |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||       |||||||||||||||||| ||||||||||||| ||||||    
T  5279413 gtatggacaatgcataatatatgcaatgtctggagttcaaacctcgaccaccataaaaaaatacaattattccaccgatccgaaaaagaaaattttgcat 5279314  T
Q  278 ttctctctttcctgcaaattaaccaagactaaactaaccttttatggataacctctg---------------cagtttcatagtatgtttgtttccatgg 362  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||               ||||||||||||||||||||||||  ||    
T  5279313 ttctctctttccttcaaattaaccaagactaaactaaccttttatggataacctctgcaggttagaactagacagtttcatagtatgtttgtttccgcgg 5279214  T
Q  363 cctcccacattgcttttactgacctatg 390  Q
    ||||||||||||||||||||||||||||    
T  5279213 cctcccacattgcttttactgacctatg 5279186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 138
Target Start/End: Complemental strand, 5279235 - 5279127
Alignment:
Q  30 catagtatgtttgtttttgcggcctcccacattgcttttcctgacctatgtaatgtgtacctttaagttgggcgctgcaccgtgccgctgagatttggtt 129  Q
    ||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5279235 catagtatgtttgtttccgcggcctcccacattgcttttactgacctatgtaatgtgtacctttaagttgggcgctgcaccgtgccgctgagatttggtt 5279136  T
Q  130 gtttttcaa 138  Q
    |||||||||    
T  5279135 gtttttcaa 5279127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 32944754 - 32944806
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||||||||    
T  32944754 gtatggacaatgcataatatatgcaacgtctggggttcgaaccccgaccacca 32944806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 42045415 - 42045363
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  42045415 gtatggacaatgcataatatatgcaaggtctggagttcaaaccccggccacca 42045363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 16307671 - 16307719
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||||||   |||||||||||||||||    
T  16307671 ggacaatgcataatatatgcaaggtctggggatcaaaccccgaccacca 16307719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 29987151 - 29987103
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||||||| ||| |||||| |||||||    
T  29987151 ggacaatgcataatatatgcaaggtctggagttcgaaccccaaccacca 29987103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 37600954 - 37600990
Alignment:
Q  144 tttgtaaggatgagttaagcccaaaatttcaacagta 180  Q
    |||||||||||||||||||||| ||||||||||||||    
T  37600954 tttgtaaggatgagttaagccccaaatttcaacagta 37600990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 43356457 - 43356505
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||| || || |||| ||||||||||||||||||    
T  43356457 ggacaatgcataatatatgtaaggtttggagttcaaaccccgaccacca 43356505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 12212321 - 12212364
Alignment:
Q  186 aatgcataatatatgcaacgtctggacttcaaaccccgaccacc 229  Q
    |||||||||||||||||||||| ||  |||||||||||||||||    
T  12212321 aatgcataatatatgcaacgtccggggttcaaaccccgaccacc 12212364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 2994776 - 2994826
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    |||||||||||| ||||||||||||| ||| ||  ||||||||||||||||    
T  2994776 gtatggacaatgtataatatatgcaaggtccggggttcaaaccccgaccac 2994826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 18166620 - 18166670
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    |||| ||||||||||||||||||||| ||| ||  ||||||||||||||||    
T  18166620 gtatagacaatgcataatatatgcaaagtccggggttcaaaccccgaccac 18166670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 32950798 - 32950752
Alignment:
Q  184 acaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||| ||| ||| |||||||| |||||||||    
T  32950798 acaatgcataatatatgcaaggtccggagttcaaacctcgaccacca 32950752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 48558352 - 48558310
Alignment:
Q  136 caagccggttt-gtaaggatgagttaagcccaaaatttcaaca 177  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  48558352 caagccggttttgtaaggatgagttaagccccaaatttcaaca 48558310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 52846880 - 52846838
Alignment:
Q  136 caagccggttt-gtaaggatgagttaagcccaaaatttcaaca 177  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  52846880 caagccggttttgtaaggatgagttaagccccaaatttcaaca 52846838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 64722 - 64669
Alignment:
Q  177 agtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||| |||||||||||||||||||||| ||| ||| |||||||| || ||||||    
T  64722 agtaaggacaatgcataatatatgcaaagtccggagttcaaacctcgtccacca 64669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 1794613 - 1794666
Alignment:
Q  177 agtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||||  || ||  |||||||| |||||||||    
T  1794613 agtatggacaatgcataatatatgcaagatccggggttcaaacctcgaccacca 1794666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 25532991 - 25533036
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccg 223  Q
    |||||||||||||||||||||||||| ||| ||  |||||||||||    
T  25532991 gtatggacaatgcataatatatgcaaggtccggggttcaaaccccg 25533036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 3481587 - 3481631
Alignment:
Q  186 aatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||| ||||||  ||||||||||| ||||||    
T  3481587 aatgcataatatatgcaaggtctggggttcaaaccccggccacca 3481631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 8269407 - 8269359
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||| |||||||||||||| ||| ||  ||||||||||||||||||    
T  8269407 ggacaatacataatatatgcaaggtccggggttcaaaccccgaccacca 8269359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 8736453 - 8736505
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||||||| ||| ||  ||||||||||| ||||||    
T  8736453 gtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacca 8736505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 9265879 - 9265827
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||| |||||| |||||| ||||||  ||||||||||| ||||||    
T  9265879 gtatggacaatgtataatacatgcaaggtctgggattcaaaccccggccacca 9265827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 12269021 - 12268977
Alignment:
Q  184 acaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    |||||||||||||||||||| ||| ||  ||||||||||||||||    
T  12269021 acaatgcataatatatgcaaggtccggggttcaaaccccgaccac 12268977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 16033489 - 16033441
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||||||  ||||||| ||| ||||||    
T  16033489 ggacaatgcataatatatgcaaggtctggggttcaaactccggccacca 16033441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 17139556 - 17139508
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||| ||| ||| ||  ||||||||||||||||||    
T  17139556 ggacaatgcataatatattcaaggtccggggttcaaaccccgaccacca 17139508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 22335380 - 22335428
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| |||||   |||||||||||| |||||    
T  22335380 ggacaatgcataatatatgcaaggtctgaggttcaaaccccgaacacca 22335428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Complemental strand, 26803494 - 26803450
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaacccc 222  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||    
T  26803494 gtatggacaatgcataatatatgcaaagtccggggttcaaacccc 26803450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 27533265 - 27533313
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||  ||  ||||||||||||||||||    
T  27533265 ggacaatgcataatatatgcaaggttcggggttcaaaccccgaccacca 27533313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 28006765 - 28006809
Alignment:
Q  183 gacaatgcataatatatgcaacgtctggacttcaaaccccgacca 227  Q
    ||||||||||||||||||||| ||| ||| || ||||||||||||    
T  28006765 gacaatgcataatatatgcaaagtccggagtttaaaccccgacca 28006809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 28712577 - 28712526
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    |||| |||||||||||||||||||| ||| ||| |||||||||||| ||||||    
T  28712577 tatgcacaatgcataatatatgcaaggtc-ggagttcaaaccccgatcaccat 28712526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 28832214 - 28832162
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||| |||||||||||||||||||| |||||   |||||| |||||||||||    
T  28832214 gtatgaacaatgcataatatatgcaaggtctgaggttcaaatcccgaccacca 28832162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 32923840 - 32923888
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||| || ||||| | ||||||| ||||||||||    
T  32923840 ggacaatgcataatatatgaaaggtctgaagttcaaactccgaccacca 32923888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 34521233 - 34521181
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  |||||||| || ||||||    
T  34521233 gtatggacaatgcataatatatgcaaggtccggggttcaaacctcggccacca 34521181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 40227847 - 40227899
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||| ||| ||||||  ||| ||||||||||||||    
T  40227847 gtatggacaatgcataaaatatacaaggtctggggttcgaaccccgaccacca 40227899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 45140049 - 45139997
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| |||  || || |||||||| ||||||    
T  45140049 gtatggacaatgcataatatatgcaaggtccagagtttaaaccccggccacca 45139997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 29376919 - 29376971
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  29376919 gtatggacaatgcgtaatatatgcaaggtctggagttcaaaccccgaccacca 29376971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 7996958 - 7997010
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||| ||||||||||||||| ||||||  ||||||||||||||||||    
T  7996958 gtatggacaacgcataatatatgcaaggtctggggttcaaaccccgaccacca 7997010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 27718936 - 27718885
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||    
T  27718936 tatggacaatgcataatatatgcaaggtccggagttcaaactccgaccacca 27718885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 11709008 - 11709057
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    |||||||||||||||||||||| ||| | | |||||||||||||||||||    
T  11709008 ggacaatgcataatatatgcaaggtccgaagttcaaaccccgaccaccat 11709057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 12748919 - 12748971
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||| ||||||    
T  12748919 gtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 12748971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 12800943 - 12800891
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||| |||||||||||||| ||| ||  ||||||||||||||||||    
T  12800943 gtatggacaatacataatatatgcaaggtccggggttcaaaccccgaccacca 12800891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 19163579 - 19163527
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||| ||||||| ||| ||  ||||||||||||||||||    
T  19163579 gtatggacaatgcataatttatgcaaggtccggggttcaaaccccgaccacca 19163527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 32944883 - 32944831
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||||||| |||||   ||||||||||||||||||    
T  32944883 gtatggacaatgcataaaatatgcaaggtctgaggttcaaaccccgaccacca 32944831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 6038317 - 6038266
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| || ||||||| ||||||| ||| ||||||    
T  6038317 tatggacaatgcataatatatgtaaggtctggagttcaaactccggccacca 6038266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 8461875 - 8461829
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||||||||    
T  8461875 ggacaatgcataaaatatgcaaggtccggagttcaaaccccgaccac 8461829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 15011060 - 15011018
Alignment:
Q  136 caagccggttt-gtaaggatgagttaagcccaaaatttcaaca 177  Q
    ||||||||||| ||||||||||||||||||| |||||||||||    
T  15011060 caagccggttttgtaaggatgagttaagccccaaatttcaaca 15011018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 8137953 - 8138002
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgacca 227  Q
    ||||||||||||||||| |||||||| || |||  |||||||||||||||    
T  8137953 gtatggacaatgcataaaatatgcaaagtttggggttcaaaccccgacca 8138002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 11603881 - 11603828
Alignment:
Q  177 agtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||| |||||||||||||||||||||| ||  ||| |||||||| |||||||||    
T  11603881 agtaaggacaatgcataatatatgcaaggttgggagttcaaacctcgaccacca 11603828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 32051572 - 32051523
Alignment:
Q  181 tggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||||| ||| ||  ||||||||||| ||||||    
T  32051572 tggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 32051523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 32223917 - 32223880
Alignment:
Q  183 gacaatgcataatatatgcaacgtctggacttcaaacc 220  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  32223917 gacaatgcataatatatgcaaagtctggagttcaaacc 32223880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 32944947 - 32944988
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccg 223  Q
    |||||||||||||||||||||| ||||| | |||||||||||    
T  32944947 ggacaatgcataatatatgcaaggtctgaagttcaaaccccg 32944988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 2489702 - 2489750
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||||||||||   |||||||| || ||||||    
T  2489702 ggacaatgcataatatatgcaacgtctgaggttcaaacctcggccacca 2489750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 6447207 - 6447247
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaa 218  Q
    |||||||||||||||||||||||||| ||| ||| ||||||    
T  6447207 gtatggacaatgcataatatatgcaaggtccggagttcaaa 6447247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 9192270 - 9192218
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||| ||||||||||||||||| || ||||||  ||||||||||| ||||||    
T  9192270 gtatgaacaatgcataatatatgtaaagtctggggttcaaaccccggccacca 9192218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 20665402 - 20665354
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  20665402 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 20665354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 23093343 - 23093395
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||| ||||||||||||| ||||||  | | ||||||||||||||    
T  23093343 gtatggacaatgtataatatatgcaaggtctgggatacgaaccccgaccacca 23093395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 24338239 - 24338195
Alignment:
Q  186 aatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||| |||||||| ||||| | ||||||||||||||||||    
T  24338239 aatgcataaaatatgcaaggtctgaagttcaaaccccgaccacca 24338195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 26991799 - 26991747
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    ||||||||||||||||||||||||| || ||   |||||||| ||||||||||    
T  26991799 tatggacaatgcataatatatgcaaggtttgtggttcaaaccacgaccaccat 26991747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 30550765 - 30550717
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  30550765 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 30550717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 31767062 - 31767098
Alignment:
Q  144 tttgtaaggatgagttaagcccaaaatttcaacagta 180  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  31767062 tttgtaaggatgagttaggccccaaatttcaacagta 31767098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 44215514 - 44215466
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  44215514 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 44215466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 3671842 - 3671894
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  3671842 gtatgaacaatgcataatatatgcaaggtctggagttcaaaccccgaccacca 3671894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 19599163 - 19599214
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacc 229  Q
    |||||||||||||||||||||||||| ||| ||  |||||||||||||||||    
T  19599163 gtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 19036141 - 19036092
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    ||||||||||||| |||||||| ||||||| ||||||||||| |||||||    
T  19036141 ggacaatgcataaaatatgcaaggtctggagttcaaaccccggccaccat 19036092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 20718495 - 20718544
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    ||||||||||||| |||||||| ||||||| ||||||||||| |||||||    
T  20718495 ggacaatgcataaaatatgcaaggtctggagttcaaaccccggccaccat 20718544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 5579715 - 5579763
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||| |||||||||||||||| ||||||  ||||||||||||||||||    
T  5579715 ggacagtgcataatatatgcaaggtctggggttcaaaccccgaccacca 5579763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 27462479 - 27462427
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||| ||||||    
T  27462479 gtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 27462427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 30857266 - 30857318
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| || | || |||||||||| |||||||    
T  30857266 gtatggacaatgcataatatatgcaaggttttgagttcaaaccccaaccacca 30857318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 2402497 - 2402544
Alignment:
Q  183 gacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||||||||||| || |||| | ||||||||    
T  2402497 gacaatgcataatatatgcaacgtctggagtttaaactcggaccacca 2402544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 144 - 179
Target Start/End: Original strand, 34590610 - 34590645
Alignment:
Q  144 tttgtaaggatgagttaagcccaaaatttcaacagt 179  Q
    |||||||||||||||||||||| |||||||||||||    
T  34590610 tttgtaaggatgagttaagccccaaatttcaacagt 34590645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 46849145 - 46849098
Alignment:
Q  183 gacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||| || || |||| ||||||||||||||||||    
T  46849145 gacaatgcataatatatgtaaagtttggagttcaaaccccgaccacca 46849098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 47342474 - 47342427
Alignment:
Q  181 tggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    ||||||||||||||||||||||| ||| ||| ||||||| ||||||||    
T  47342474 tggacaatgcataatatatgcaaggtccggagttcaaactccgaccac 47342427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 37516846 - 37516796
Alignment:
Q  177 agtatggacaatgcataatatatgcaacgtctggacttcaaaccccgacca 227  Q
    |||||||||||||||||| |||||||| ||| ||| |||||||| ||||||    
T  37516846 agtatggacaatgcataacatatgcaaggtccggagttcaaacctcgacca 37516796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 41670906 - 41670952
Alignment:
Q  136 caagccggttt-gtaaggatgagttaagcccaaaatttcaacagtat 181  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||||    
T  41670906 caagccggttttgtaaggatgagttaggccccaaatttcaacagtat 41670952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 43167915 - 43167881
Alignment:
Q  144 tttgtaaggatgagttaagcccaaaatttcaacag 178  Q
    |||||||||||||||||||||| ||||||||||||    
T  43167915 tttgtaaggatgagttaagccccaaatttcaacag 43167881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 5041357 - 5041398
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaac 219  Q
    |||||||||||||||||||||||||| ||||||  |||||||    
T  5041357 gtatggacaatgcataatatatgcaaggtctggggttcaaac 5041398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 10026015 - 10026064
Alignment:
Q  181 tggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||| |||||||| || |||  ||||||||||||||||||    
T  10026015 tggacaatgcataaaatatgcaaggtatggggttcaaaccccgaccacca 10026064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 23413089 - 23413048
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaac 219  Q
    |||||||||||||||||||||||||| ||| ||| |||||||    
T  23413089 gtatggacaatgcataatatatgcaaggtcgggagttcaaac 23413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 48629104 - 48629055
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    |||||||||||||||||||||| ||| ||  || ||||||||||||||||    
T  48629104 ggacaatgcataatatatgcaaggtccggggtttaaaccccgaccaccat 48629055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 6783111 - 6783155
Alignment:
Q  136 caagccggttt-gtaaggatgagttaagcccaaaatttcaacagt 179  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||    
T  6783111 caagccggttttgtaaggatgagttaggccccaaatttcaacagt 6783155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 7735548 - 7735600
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||||||| |||| |  |||||| |||||||||||    
T  7735548 gtatggacaatgcataaaatatgcaaggtctagggttcaaagcccgaccacca 7735600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 19416532 - 19416584
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||||||| ||| ||  ||||||||||| ||||||    
T  19416532 gtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacca 19416584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 20763176 - 20763224
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  20763176 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 20763224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 27833440 - 27833392
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||| || ||| ||  ||||||||||||||||||    
T  27833440 ggacaatgcataatatatgtaaggtccggggttcaaaccccgaccacca 27833392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 29488742 - 29488790
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  29488742 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 29488790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 31038565 - 31038513
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||| | ||||||| ||||||  ||||||||||| ||||||    
T  31038565 gtatggacaatgcatattgtatgcaaggtctggggttcaaaccccggccacca 31038513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 33232436 - 33232388
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  33232436 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 33232388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 34284578 - 34284530
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  34284578 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 34284530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 45088894 - 45088945
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||| |||||||||||||||||||| ||| ||  ||||||||||||||||||    
T  45088894 gtatgaacaatgcataatatatgcaaggtc-ggggttcaaaccccgaccacca 45088945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 20744156 - 20744206
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  20744156 gtatggacaatgcataatatatgcaaggtctggggttcaaaccccgaccac 20744206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 27080848 - 27080795
Alignment:
Q  177 agtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||| ||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  27080848 agtagggacaatgcataatatatgcaagctctggaattcaaaccccgaccacca 27080795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 4455639 - 4455587
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||| ||||||||||||||| ||||||  ||||||||||||||||||    
T  4455639 gtatggacaaggcataatatatgcaaggtctggggttcaaaccccgaccacca 4455587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 9367422 - 9367471
Alignment:
Q  181 tggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||| |||||||| ||||||  ||||||||||||||||||    
T  9367422 tggacaatgcataaaatatgcaaggtctgggattcaaaccccgaccacca 9367471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 788888 - 788936
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  788888 ggacaatgcataatatatgcaaggttcggagttcaaaccccgaccacca 788936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 8569727 - 8569779
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||| ||||||    
T  8569727 gtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 8569779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 9977075 - 9977127
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||| |||||||||||||||||| ||||||  ||||||||| ||||||||    
T  9977075 gtatggataatgcataatatatgcaaggtctggggttcaaaccctgaccacca 9977127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 12582268 - 12582220
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||||||| ||||||||||| ||||||    
T  12582268 ggacaatgcataaaatatgcaaggtctggagttcaaaccccggccacca 12582220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 13496135 - 13496183
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgacca 227  Q
    |||| |||||||||||||||||||| ||| ||| |||||||||||||||    
T  13496135 tatgaacaatgcataatatatgcaaggtccggagttcaaaccccgacca 13496183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 26357943 - 26357986
Alignment:
Q  176 cagtatggacaatgcataatatatgcaacgtctggacttcaaac 219  Q
    ||||||||||||||||||| ||||||||||||| || |||||||    
T  26357943 cagtatggacaatgcataaaatatgcaacgtctagagttcaaac 26357986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 230
Target Start/End: Complemental strand, 27080736 - 27080689
Alignment:
Q  183 gacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||  |||||  ||||||||||||||||||    
T  27080736 gacaatgcataatatatgcaagctctgggattcaaaccccgaccacca 27080689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 14918339 - 14918293
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    |||||||||||||||||| ||| ||||||  ||||||||||||||||    
T  14918339 ggacaatgcataatatatacaaggtctggggttcaaaccccgaccac 14918293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 15155759 - 15155805
Alignment:
Q  184 acaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||| ||||||  |||||||| |||||||||    
T  15155759 acaatgcataatatatgcaaggtctggggttcaaaccacgaccacca 15155805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 247681 - 247729
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  247681 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 247729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 7083031 - 7082991
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaacccc 222  Q
    ||||||||||||||||||||||  |||||| ||||||||||    
T  7083031 ggacaatgcataatatatgcaagatctggagttcaaacccc 7082991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 8629739 - 8629687
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||  ||  |||||||| |||||||||    
T  8629739 gtatggacaatgcataatatatgcaaggttcggggttcaaacctcgaccacca 8629687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 12232221 - 12232173
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||  ||||||  ||| ||||||||||||||    
T  12232221 ggacaatgcataatatatgcagtgtctggggttcgaaccccgaccacca 12232173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 23629875 - 23629827
Alignment:
Q  183 gacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    ||||||||||||||||||||| || || | |||||||||||| ||||||    
T  23629875 gacaatgcataatatatgcaaggtatgaagttcaaaccccgaacaccat 23629827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 27834361 - 27834409
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||| ||||||||||||||| ||||||  ||||||||| ||||||||    
T  27834361 ggacaaggcataatatatgcaaggtctggggttcaaacccggaccacca 27834409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 29740500 - 29740552
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||| |||| ||| ||  ||||||||||| ||||||    
T  29740500 gtatggacaatgcataatatacgcaaggtccggggttcaaaccccggccacca 29740552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000009; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 11949806 - 11949754
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||||||||||    
T  11949806 gtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 11949754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 38374979 - 38375027
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||    
T  38374979 ggacaatgcataatatatgcaaggtctggagttcaaaccccggccacca 38375027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 47015612 - 47015558
Alignment:
Q  177 agtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    ||||||||||||||||||||||| ||| ||||||  ||||||| |||||||||||    
T  47015612 agtatggacaatgcataatatatacaaggtctggggttcaaactccgaccaccat 47015558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 9946445 - 9946497
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||||||| ||| ||  ||||||||||||||||||    
T  9946445 gtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccacca 9946497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 19479519 - 19479467
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    |||| |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  19479519 tatgaacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccat 19479467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 21114348 - 21114296
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||| |||||||||| ||| ||  ||||||||||||||||||    
T  21114348 gtatggacaatgcatgatatatgcaaggtccggggttcaaaccccgaccacca 21114296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 21318292 - 21318244
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| |||| |  ||||||||||||||||||    
T  21318292 ggacaatgcataatatatgcaaggtctagggttcaaaccccgaccacca 21318244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 231
Target Start/End: Complemental strand, 22630398 - 22630350
Alignment:
Q  183 gacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    ||||||||||||||||||||| |||||   |||||||||||||||||||    
T  22630398 gacaatgcataatatatgcaaggtctgaggttcaaaccccgaccaccat 22630350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 24079879 - 24079831
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||||||||||    
T  24079879 ggacaatgcataaaatatgcaaggtccggagttcaaaccccgaccacca 24079831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 27537766 - 27537817
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||    
T  27537766 gtatggacaatgcataatatatgcaaggtc-ggaattcaaaccccggccacca 27537817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 43034385 - 43034333
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| |||||   ||||||||||| ||||||    
T  43034385 gtatggacaatgcataatatatgcaaggtctgaggttcaaaccccggccacca 43034333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 6610280 - 6610331
Alignment:
Q  177 agtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    |||||||| |||| ||||||||||||| ||||||  ||||||||||||||||    
T  6610280 agtatggataatgtataatatatgcaaggtctggggttcaaaccccgaccac 6610331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 17729454 - 17729496
Alignment:
Q  188 tgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||| ||||||  ||||||||||||||||||    
T  17729454 tgcataatatatgcaaggtctggggttcaaaccccgaccacca 17729496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 22164306 - 22164260
Alignment:
Q  184 acaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| || ||||||  ||||||||||||||||||    
T  22164306 acaatgcataatatatgtaaggtctggggttcaaaccccgaccacca 22164260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 37930884 - 37930838
Alignment:
Q  184 acaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||| |||||   ||||||||||||||||||    
T  37930884 acaatgcataatatatgcaaggtctgaggttcaaaccccgaccacca 37930838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 13121566 - 13121607
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccg 223  Q
    |||||||||||||||||||||| ||||| | |||||||||||    
T  13121566 ggacaatgcataatatatgcaaggtctgaagttcaaaccccg 13121607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 14577546 - 14577505
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccg 223  Q
    |||||||||||||||||||||| ||| ||| |||||||||||    
T  14577546 ggacaatgcataatatatgcaaagtccggagttcaaaccccg 14577505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Complemental strand, 16304141 - 16304088
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    |||||||||||||||||||||||||| ||| ||  |||||||| || |||||||    
T  16304141 gtatggacaatgcataatatatgcaaggtccgggattcaaaccgcggccaccat 16304088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 223
Target Start/End: Original strand, 16431634 - 16431679
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccg 223  Q
    ||||||||||||||||| |||||||| ||||||  |||||||||||    
T  16431634 gtatggacaatgcataaaatatgcaaggtctggggttcaaaccccg 16431679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 40071011 - 40070962
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgacca 227  Q
    ||||| |||||||||||||||||||| ||| | | |||||||||||||||    
T  40071011 gtatgaacaatgcataatatatgcaaggtccgaagttcaaaccccgacca 40070962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 43374314 - 43374265
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    |||||||||||||||| |||||||| ||  ||| ||||||||||||||||    
T  43374314 tatggacaatgcataaaatatgcaaggttcggagttcaaaccccgaccac 43374265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 10261808 - 10261760
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  10261808 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 10261760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 20383506 - 20383550
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaacccc 222  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||    
T  20383506 gtatggacaatgcataatatatgcaaggtccggggttcaaacccc 20383550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 21562647 - 21562695
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  21562647 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 21562695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 23247641 - 23247589
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||| ||||||||||||||| ||||||  || |||||||| ||||||    
T  23247641 gtatggacaacgcataatatatgcaaggtctggggtttaaaccccggccacca 23247589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 24665034 - 24664982
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||| |||||||||||||||||| ||| ||  ||| ||||||||||||||    
T  24665034 gtatggagaatgcataatatatgcaaggtccggggttcgaaccccgaccacca 24664982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 26926749 - 26926701
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  26926749 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 26926701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 29908078 - 29908126
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||| ||| |||||||| ||| |||||    
T  29908078 ggacaatgcataatatatgcaaggtccggagttcaaacctcgatcacca 29908126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 32180848 - 32180900
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||| |||||||||||| |||||||| ||||||  ||| ||||||||||||||    
T  32180848 gtatagacaatgcataaaatatgcaaagtctggggttcgaaccccgaccacca 32180900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Complemental strand, 33797140 - 33797097
Alignment:
Q  136 caagccggttt-gtaaggatgagttaagcccaaaatttcaacagt 179  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||    
T  33797140 caagccggtttcgtaaggatgagttaagccc-aaatttcaacagt 33797097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 43330168 - 43330216
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  43330168 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 43330216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 47806295 - 47806247
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||||||  ||| |||||||| |||||    
T  47806295 ggacaatgcataatatatgcaaggtctggggttcgaaccccgaacacca 47806247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 51450234 - 51450282
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  51450234 ggacaatgcataagatatgcaaggtccggagttcaaaccccggccacca 51450282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 52270073 - 52270041
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctgg 210  Q
    |||||||||||||||||||||||||| ||||||    
T  52270073 gtatggacaatgcataatatatgcaaggtctgg 52270041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000009; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 25441543 - 25441491
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||| ||||||    
T  25441543 gtatggacaatgcataatatatgcaaggtctggggttcaaaccccggccacca 25441491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 14030774 - 14030726
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||| ||||||||||||||| || |||| ||||||||||||||||||    
T  14030774 ggacaacgcataatatatgcaaggtttggagttcaaaccccgaccacca 14030726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 25728010 - 25727958
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  |||||| |||||||||||    
T  25728010 gtatggacaatgcataatatatgcaaggtccggggttcaaatcccgaccacca 25727958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 26768419 - 26768471
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||| |||||||||||| |||||||| |||||  |||||||||||||||||||    
T  26768419 gtatagacaatgcataaaatatgcaaggtctgagcttcaaaccccgaccacca 26768471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 34899119 - 34899167
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||| ||  ||||||||||||||||||    
T  34899119 ggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 38131002 - 38130950
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||| ||||||    
T  38131002 gtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 38130950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 7827527 - 7827578
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| || ||||||| ||| || |||||||||||    
T  7827527 tatggacaatgcataatatatgtaaggtctggagttcgaaacccgaccacca 7827578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 52172831 - 52172788
Alignment:
Q  177 agtatggacaatgcataatatatgcaacgtctggacttcaaacc 220  Q
    |||||||||||||||||||||||||||  |||||| ||||||||    
T  52172831 agtatggacaatgcataatatatgcaagatctggagttcaaacc 52172788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 1111880 - 1111834
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    ||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  1111880 ggacaatacataatatatgcaaggtctggggttcaaaccccgaccac 1111834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 2186470 - 2186421
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgacca 227  Q
    ||||||||||| ||||||||||| || ||||||  |||||||||||||||    
T  2186470 gtatggacaatacataatatatgtaaggtctggggttcaaaccccgacca 2186421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 32843302 - 32843253
Alignment:
Q  181 tggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||| |||||||| ||||||  ||||||||||| ||||||    
T  32843302 tggacaatgcataaaatatgcaaggtctggggttcaaaccccggccacca 32843253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 37058793 - 37058760
Alignment:
Q  144 tttgtaaggatgagttaagcccaaaatttcaaca 177  Q
    ||||||||||||||||| ||||||||||||||||    
T  37058793 tttgtaaggatgagttaggcccaaaatttcaaca 37058760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 38630150 - 38630109
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccg 223  Q
    ||||| |||||||||||||||| ||||||| |||||||||||    
T  38630150 ggacagtgcataatatatgcaatgtctggagttcaaaccccg 38630109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 39779042 - 39779095
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    |||||||||||||||||||||||||| ||  ||  |||||||||| ||||||||    
T  39779042 gtatggacaatgcataatatatgcaaggttcggggttcaaaccccaaccaccat 39779095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 180
Target Start/End: Original strand, 44574009 - 44574054
Alignment:
Q  136 caagccggttt-gtaaggatgagttaagcccaaaatttcaacagta 180  Q
    ||||||||||| |||||||||||||| |||| ||||||||||||||    
T  44574009 caagccggttttgtaaggatgagttaggccccaaatttcaacagta 44574054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 916461 - 916509
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  916461 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 916509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 977984 - 977944
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaa 218  Q
    |||||||||||||||||||||||||| ||| ||| ||||||    
T  977984 gtatggacaatgcataatatatgcaaggtccggagttcaaa 977944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 7464530 - 7464482
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||| || ||| ||  ||||||||||||||||||    
T  7464530 ggacaatgcataatatatgtaaggtccggggttcaaaccccgaccacca 7464482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 8238586 - 8238634
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||||||  ||||||| ||| ||||||    
T  8238586 ggacaatgcataatatatgcaaggtctggggttcaaactccggccacca 8238634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 10498738 - 10498686
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| |||  || |||||||| || ||||||    
T  10498738 gtatggacaatgcataatatatgcaaggtcatgagttcaaacctcggccacca 10498686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 25340967 - 25340915
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||||||| ||| ||  ||||||||||| ||||||    
T  25340967 gtatggacaatgcataaaatatgcaaggtccggggttcaaaccccggccacca 25340915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 27185499 - 27185547
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||| |||||||||||||| ||||||  |||||||| |||||||||    
T  27185499 ggacaatacataatatatgcaaggtctggggttcaaacctcgaccacca 27185547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 29164788 - 29164744
Alignment:
Q  186 aatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||| ||||||||||||| ||||||  ||||||||||||||||||    
T  29164788 aatgtataatatatgcaaagtctggggttcaaaccccgaccacca 29164744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 29631204 - 29631256
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||  ||  ||||||||||| ||||||    
T  29631204 gtatggacaatgcataatatatgcaaggttcgggattcaaaccccggccacca 29631256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 37364472 - 37364420
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||| |||  |||||| |||||| |||||||||||    
T  37364472 gtatggacaatgcataaaatatacaagatctggagttcaaatcccgaccacca 37364420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 44075195 - 44075147
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  44075195 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 44075147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 222
Target Start/End: Original strand, 46483265 - 46483309
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaacccc 222  Q
    |||||||||||||||||||||||||| ||| ||| ||| ||||||    
T  46483265 gtatggacaatgcataatatatgcaaagtccggagttcgaacccc 46483309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 48234492 - 48234444
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||  || |||| || |||||||||||||||    
T  48234492 ggacaatgcataatatatgcatggtttggagtttaaaccccgaccacca 48234444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 49975847 - 49975807
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaac 219  Q
    ||||||||||||||||||||||||| ||||||  |||||||    
T  49975847 tatggacaatgcataatatatgcaaggtctggggttcaaac 49975807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 179
Target Start/End: Original strand, 50692599 - 50692643
Alignment:
Q  136 caagccggttt-gtaaggatgagttaagcccaaaatttcaacagt 179  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||    
T  50692599 caagccggttttgtaaggatgagttaggccccaaatttcaacagt 50692643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Original strand, 53996317 - 53996349
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctgg 210  Q
    |||||||||||||||||||||||||| ||||||    
T  53996317 gtatggacaatgcataatatatgcaaggtctgg 53996349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 9547451 - 9547400
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||||||| || |||  ||||||||||||||||||    
T  9547451 tatggacaatgcataatatatgcaaggtttggggttcaaaccccgaccacca 9547400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 17142853 - 17142900
Alignment:
Q  183 gacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||| ||||||||||||| ||||||| ||||||||||||||||||    
T  17142853 gacaatgtataatatatgcaaagtctggagttcaaaccccgaccacca 17142900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 12599909 - 12599856
Alignment:
Q  177 agtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||| |||||||||||||| ||||||  ||| ||||||||||||||    
T  12599909 agtatggacaatacataatatatgcaaggtctggggttcgaaccccgaccacca 12599856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 230
Target Start/End: Complemental strand, 23407058 - 23407009
Alignment:
Q  181 tggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||||| ||||||  ||||||||| ||||||||    
T  23407058 tggacaatgcataatatatgcaaggtctggggttcaaaccctgaccacca 23407009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 29923372 - 29923413
Alignment:
Q  136 caagccggtttgtaaggatgagttaagcccaaaatttcaaca 177  Q
    ||||||||||||||||||||||||| |||| |||||||||||    
T  29923372 caagccggtttgtaaggatgagttaggccccaaatttcaaca 29923413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 34977222 - 34977275
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    |||||||||||||||||||||||||| ||| ||| || |||||||| |||||||    
T  34977222 gtatggacaatgcataatatatgcaaggtccggagtttaaaccccggccaccat 34977275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 41859870 - 41859923
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    ||||||||||||||||| |||||||| ||||||  ||||||||||| |||||||    
T  41859870 gtatggacaatgcataaaatatgcaaggtctggggttcaaaccccggccaccat 41859923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 660865 - 660813
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| |||  |  ||||||||||||||||||    
T  660865 gtatggacaatgcataatatatgcaaggtccagggttcaaaccccgaccacca 660813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 2256989 - 2257041
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||||||  ||| ||||||| ||||||    
T  2256989 gtatggacaatgcataatatatgcaaggtctggggttcgaaccccggccacca 2257041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 24592885 - 24592837
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||||||  ||||||||||| ||||||    
T  24592885 ggacaatgcataatatatgcaaggtctggggttcaaaccccggccacca 24592837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 25612336 - 25612284
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  ||||| ||||||||||||    
T  25612336 gtatggacaatgcataatatatgcaaggtccgggattcaacccccgaccacca 25612284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 31815926 - 31815878
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||| ||  ||||||||||||||||||    
T  31815926 ggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 31815878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 15447748 - 15447705
Alignment:
Q  187 atgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| ||||||| ||||||||||| ||||||    
T  15447748 atgcataatatatgcaaggtctggagttcaaaccccggccacca 15447705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 8781693 - 8781643
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    |||||||||||||||||| ||||||| ||| ||  ||||||||||||||||    
T  8781693 gtatggacaatgcataatgtatgcaaggtccggggttcaaaccccgaccac 8781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 29896331 - 29896285
Alignment:
Q  184 acaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||| || |||  ||||||||||||||||||    
T  29896331 acaatgcataatatatgcaaggtttggggttcaaaccccgaccacca 29896285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 3197118 - 3197070
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    |||||||||||||||||||||| ||  ||| |||||||||||||||||||    
T  3197118 ggacaatgcataatatatgcaaggttcgga-ttcaaaccccgaccaccat 3197070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 230
Target Start/End: Original strand, 22558998 - 22559047
Alignment:
Q  181 tggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||| |||| ||| ||||||| |||||| |||||||||||    
T  22558998 tggacaatgcataaaatatacaaggtctggagttcaaaacccgaccacca 22559047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Original strand, 31761413 - 31761446
Alignment:
Q  144 tttgtaaggatgagttaagcccaaaatttcaaca 177  Q
    |||||||||||||||||||||| |||||||||||    
T  31761413 tttgtaaggatgagttaagccccaaatttcaaca 31761446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 833112 - 833080
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctgg 210  Q
    |||||||||||||||||||||||||| ||||||    
T  833112 gtatggacaatgcataatatatgcaaggtctgg 833080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 3708715 - 3708763
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  3708715 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 3708763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 210
Target Start/End: Complemental strand, 4122056 - 4122024
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctgg 210  Q
    |||||||||||||||||||||||||| ||||||    
T  4122056 gtatggacaatgcataatatatgcaaggtctgg 4122024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 7350564 - 7350616
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| |||| |  |||||| || ||||||||    
T  7350564 gtatggacaatgcataatatatgcaaagtctagggttcaaatcctgaccacca 7350616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 11175803 - 11175855
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||||||||  |||||  ||||||| ||| ||||||    
T  11175803 gtatggacaatgcataatatatgcaagatctggggttcaaactccggccacca 11175855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 11868701 - 11868653
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  11868701 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 11868653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 15503147 - 15503199
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||| ||||||| |||||||  |||||||||| ||||||    
T  15503147 gtatggacaatgcgtaatttatgcaaagtctggaggtcaaaccccggccacca 15503199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 20565114 - 20565066
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||| ||  |||||||||| |||||||    
T  20565114 ggacaatgcataatatatgcaaggtccggggttcaaaccccaaccacca 20565066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 22267535 - 22267582
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| || | || ||||||||||||||||||    
T  22267535 ggacaatgcataatatatgcaaggt-ttgagttcaaaccccgaccacca 22267582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 29544649 - 29544697
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||| ||  ||||||||||| ||||||    
T  29544649 ggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 29544697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 29734710 - 29734758
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgacca 227  Q
    ||||||||||||||||||||||||| ||| |   |||||||||||||||    
T  29734710 tatggacaatgcataatatatgcaaggtccgtggttcaaaccccgacca 29734758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 31543030 - 31543082
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||| |||||||||||||||||| ||| ||  |||||||||| |||||||    
T  31543030 gtatggataatgcataatatatgcaaggtccggggttcaaaccccaaccacca 31543082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 35360094 - 35360046
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  35360094 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 35360046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 36013968 - 36013920
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||| ||| ||||||||||||||||||| | |||||||||||| |||||    
T  36013968 ggacgatgtataatatatgcaacgtctgcaattcaaaccccgaacacca 36013920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 36264522 - 36264470
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||| |||||||||||||||||| ||  ||  ||||||||||||||||||    
T  36264522 gtatggataatgcataatatatgcaaagttcggggttcaaaccccgaccacca 36264470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 44526146 - 44526198
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||| |||| ||| ||  ||||||||||| ||||||    
T  44526146 gtatggacaatgcataatatacgcaaggtccgggattcaaaccccggccacca 44526198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 5200 - 5252
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| |||||   |||||||||| |||||||    
T  5200 gtatggacaatgcataatatatgcaaggtctgaggttcaaaccccaaccacca 5252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 53419 - 53371
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||||||  ||||||||||||||||||    
T  53419 ggacaatgcataaaatatgcaaggtctggggttcaaaccccgaccacca 53371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 64236 - 64288
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  ||| ||||||||||||||    
T  64236 gtatggacaatgcataatatatgcaaggtccgggattcgaaccccgaccacca 64288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 6489029 - 6489077
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||||||  ||||||||||| ||||||    
T  6489029 ggacaatgcataatatatgcaaggtctggggttcaaaccccggccacca 6489077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 15889433 - 15889481
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| |||| |  ||||||||||||||||||    
T  15889433 ggacaatgcataatatatgcaaggtctagggttcaaaccccgaccacca 15889481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 22522844 - 22522792
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| ||| ||  ||||||||||| ||||||    
T  22522844 gtatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 22522792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 39980526 - 39980578
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||| ||||||||| |||||||| ||| ||| ||||||||||||||||||    
T  39980526 gtatggataatgcataaaatatgcaaggtccggagttcaaaccccgaccacca 39980578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 228
Target Start/End: Original strand, 24408516 - 24408563
Alignment:
Q  181 tggacaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    ||||| ||||||||||||||||| ||||||  ||||||||||||||||    
T  24408516 tggacgatgcataatatatgcaaggtctggggttcaaaccccgaccac 24408563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 40715991 - 40715940
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||||||||||| ||| ||  ||||||||||| ||||||    
T  40715991 tatggacaatgcataatatatgcaaggtccggggttcaaaccccggccacca 40715940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 181
Target Start/End: Original strand, 24994142 - 24994188
Alignment:
Q  136 caagccggttt-gtaaggatgagttaagcccaaaatttcaacagtat 181  Q
    ||||||||||| |||||||||||||| |||| |||||||||||||||    
T  24994142 caagccggttttgtaaggatgagttaggccccaaatttcaacagtat 24994188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 4465207 - 4465174
Alignment:
Q  144 tttgtaaggatgagttaagcccaaaatttcaaca 177  Q
    |||||||||||||||||||||| |||||||||||    
T  4465207 tttgtaaggatgagttaagccccaaatttcaaca 4465174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 5846051 - 5846092
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccg 223  Q
    |||||||||||||||||||||| ||||||  |||||||||||    
T  5846051 ggacaatgcataatatatgcaaagtctggggttcaaaccccg 5846092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 16089468 - 16089521
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    |||||||||||||||||||| ||||| ||||||  ||| ||||||| |||||||    
T  16089468 gtatggacaatgcataatatttgcaaggtctgggattcgaaccccggccaccat 16089521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Complemental strand, 18489119 - 18489070
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgacca 227  Q
    |||| ||||||||||||||||||||| ||||||| ||  |||||||||||    
T  18489119 gtatagacaatgcataatatatgcaaggtctggagtttgaaccccgacca 18489070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 20720377 - 20720344
Alignment:
Q  144 tttgtaaggatgagttaagcccaaaatttcaaca 177  Q
    |||||||||||||||||||||| |||||||||||    
T  20720377 tttgtaaggatgagttaagccccaaatttcaaca 20720344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 20721068 - 20721121
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccaccat 231  Q
    ||||||||||| |||||||||||||| ||| ||  ||||||||||||| |||||    
T  20721068 gtatggacaatacataatatatgcaaggtccggggttcaaaccccgactaccat 20721121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 39610383 - 39610342
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaacc 220  Q
    ||||||||||||||||||||||||| || |||| ||||||||    
T  39610383 tatggacaatgcataatatatgcaatgtttggagttcaaacc 39610342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 8545028 - 8544980
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||| ||| ||| ||| ||||||||||    
T  8545028 ggacaatgcataatatatgcaaggtccggagttcgaactccgaccacca 8544980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 12218322 - 12218278
Alignment:
Q  184 acaatgcataatatatgcaacgtctggacttcaaaccccgaccac 228  Q
    ||||||||||| |||||||| ||||||| |||||| |||||||||    
T  12218322 acaatgcataaaatatgcaaggtctggagttcaaatcccgaccac 12218278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 12611078 - 12611026
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||||||| ||||||  ||| |||| |||||||||    
T  12611078 gtatggacaatgcataaaatatgcaaggtctggggttcgaacctcgaccacca 12611026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 13864362 - 13864414
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||| ||||| |||||||||||||| ||| ||  ||||||||||||||||||    
T  13864362 gtatgaacaatacataatatatgcaaggtccggggttcaaaccccgaccacca 13864414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 16701620 - 16701572
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||| ||||||||||||| ||| ||  ||||||||||||||||||    
T  16701620 ggacaatgaataatatatgcaaggtccgggattcaaaccccgaccacca 16701572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 30843445 - 30843393
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||| || |||  ||||||||||| ||||||    
T  30843445 gtatggacaatgcataatatattcaaagtttggggttcaaaccccggccacca 30843393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 32200486 - 32200438
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||| ||  ||||| ||||||||||||    
T  32200486 ggacaatgcataatatatgcaaggtccggggttcaagccccgaccacca 32200438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 37462133 - 37462181
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||| |||||||| ||| ||| ||||||||||| ||||||    
T  37462133 ggacaatgcataaaatatgcaaggtccggagttcaaaccccggccacca 37462181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 41650982 - 41650931
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||||||| |||  || ||||||| ||||||||||    
T  41650982 gtatggacaatgcataatatatgcaaggtc-cgagttcaaacaccgaccacca 41650931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 1267 - 1318
Alignment:
Q  179 tatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| || ||||||| ||||||| ||| ||||||    
T  1267 tatggacaatgcataatatatgtaaggtctggagttcaaactccggccacca 1318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 239829 - 239870
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccg 223  Q
    |||||||||||||||||||||| ||| ||| |||||||||||    
T  239829 ggacaatgcataatatatgcaaagtccggagttcaaaccccg 239870  T

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Target: scaffold0259 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 5431 - 5483
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||||||| ||||||  ||| | ||||||||||||    
T  5431 gtatggacaatgcataaaatatgcaaggtctggggttcgatccccgaccacca 5483  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 14229 - 14177
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||| |||||||||||||||||||| || ||   ||||||||||||||||||    
T  14229 gtatgaacaatgcataatatatgcaaggtatgtggttcaaaccccgaccacca 14177  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 161159 - 161211
Alignment:
Q  178 gtatggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    ||||||||||||||||| |||||||| ||  ||  ||||||||||||||||||    
T  161159 gtatggacaatgcataaaatatgcaaggttcggggttcaaaccccgaccacca 161211  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 99059 - 99107
Alignment:
Q  182 ggacaatgcataatatatgcaacgtctggacttcaaaccccgaccacca 230  Q
    |||||||||||||||||||||| ||||||  ||||||| ||||| ||||    
T  99059 ggacaatgcataatatatgcaaggtctggggttcaaactccgacaacca 99107  T

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