View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11400_low_40 (Length: 305)

Name: NF11400_low_40
Description: NF11400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11400_low_40
NF11400_low_40
[»] chr3 (36 HSPs)
chr3 (5-223)||(21658618-21658836)
chr3 (237-295)||(11633642-11633700)
chr3 (238-295)||(32767706-32767763)
chr3 (238-296)||(10206956-10207014)
chr3 (235-293)||(26996343-26996401)
chr3 (238-295)||(8821660-8821717)
chr3 (238-295)||(30909059-30909116)
chr3 (238-295)||(44677468-44677525)
chr3 (238-295)||(49363235-49363292)
chr3 (238-295)||(49417605-49417662)
chr3 (238-295)||(50206954-50207011)
chr3 (240-295)||(390841-390896)
chr3 (238-293)||(24482949-24483004)
chr3 (240-295)||(29634056-29634111)
chr3 (240-295)||(37508482-37508537)
chr3 (249-295)||(32421613-32421659)
chr3 (238-295)||(33375890-33375947)
chr3 (238-295)||(39020143-39020200)
chr3 (240-284)||(3347117-3347161)
chr3 (240-295)||(22371223-22371278)
chr3 (236-295)||(28419198-28419257)
chr3 (252-295)||(49761351-49761394)
chr3 (236-294)||(8846519-8846577)
chr3 (238-295)||(34456820-34456878)
chr3 (238-295)||(39671081-39671139)
chr3 (253-295)||(51465898-51465940)
chr3 (238-295)||(54773737-54773795)
chr3 (240-286)||(55013035-55013081)
chr3 (234-295)||(27718770-27718831)
chr3 (238-295)||(37927189-37927246)
chr3 (238-295)||(46019492-46019549)
chr3 (238-295)||(46253652-46253709)
chr3 (238-295)||(55400029-55400086)
chr3 (243-295)||(39697206-39697258)
chr3 (243-295)||(43905008-43905060)
chr3 (236-295)||(48353024-48353084)
[»] chr5 (30 HSPs)
chr5 (238-295)||(15267814-15267871)
chr5 (238-295)||(35098989-35099046)
chr5 (234-295)||(43441764-43441825)
chr5 (240-295)||(18842305-18842360)
chr5 (240-294)||(15478690-15478744)
chr5 (238-295)||(2688970-2689027)
chr5 (238-294)||(8267805-8267861)
chr5 (238-292)||(21064213-21064267)
chr5 (238-295)||(4430920-4430977)
chr5 (238-295)||(5042278-5042335)
chr5 (250-287)||(12878786-12878823)
chr5 (238-295)||(20770161-20770218)
chr5 (238-295)||(30640820-30640877)
chr5 (238-295)||(33620638-33620695)
chr5 (238-282)||(16437562-16437606)
chr5 (240-295)||(6931043-6931098)
chr5 (240-295)||(8675417-8675472)
chr5 (252-295)||(15953029-15953072)
chr5 (252-295)||(41175690-41175733)
chr5 (238-295)||(4771527-4771584)
chr5 (238-295)||(6517742-6517799)
chr5 (238-295)||(25871430-25871487)
chr5 (240-277)||(32360489-32360526)
chr5 (250-295)||(37700502-37700547)
chr5 (238-291)||(39628819-39628872)
chr5 (240-295)||(8097281-8097337)
chr5 (236-295)||(14321938-14321998)
chr5 (251-295)||(18397149-18397193)
chr5 (250-282)||(31683493-31683525)
chr5 (252-293)||(32639086-32639129)
[»] chr4 (48 HSPs)
chr4 (238-293)||(23822231-23822286)
chr4 (238-295)||(30079876-30079933)
chr4 (252-295)||(12112671-12112714)
chr4 (237-295)||(35820200-35820258)
chr4 (238-295)||(624296-624353)
chr4 (238-295)||(9118848-9118905)
chr4 (238-295)||(13086052-13086109)
chr4 (238-295)||(14010102-14010159)
chr4 (238-295)||(51887693-51887750)
chr4 (240-293)||(53152307-53152360)
chr4 (252-295)||(6494877-6494920)
chr4 (238-293)||(22819679-22819734)
chr4 (240-295)||(41486127-41486182)
chr4 (236-282)||(20118809-20118855)
chr4 (252-294)||(53654735-53654777)
chr4 (238-295)||(14451423-14451480)
chr4 (238-295)||(21260328-21260385)
chr4 (240-293)||(25318051-25318104)
chr4 (238-295)||(28458361-28458418)
chr4 (238-295)||(30170004-30170061)
chr4 (235-295)||(36111379-36111440)
chr4 (238-295)||(39344964-39345021)
chr4 (238-295)||(46405958-46406015)
chr4 (238-295)||(47099052-47099109)
chr4 (238-291)||(48335584-48335637)
chr4 (238-282)||(5932154-5932198)
chr4 (243-295)||(26206961-26207013)
chr4 (243-295)||(49768302-49768354)
chr4 (238-293)||(6141764-6141819)
chr4 (238-293)||(14527674-14527729)
chr4 (252-295)||(21617227-21617270)
chr4 (252-295)||(28657425-28657468)
chr4 (250-293)||(32696223-32696266)
chr4 (238-293)||(47965769-47965824)
chr4 (250-295)||(11546884-11546930)
chr4 (255-293)||(22027428-22027466)
chr4 (238-295)||(2256314-2256371)
chr4 (238-295)||(9362663-9362719)
chr4 (238-295)||(13263381-13263438)
chr4 (238-295)||(33899310-33899367)
chr4 (238-295)||(38338906-38338963)
chr4 (252-293)||(39312602-39312643)
chr4 (252-293)||(43769755-43769796)
chr4 (236-295)||(1795965-1796025)
chr4 (238-282)||(26910231-26910275)
chr4 (235-295)||(31076081-31076141)
chr4 (238-282)||(39478464-39478508)
chr4 (238-282)||(43175013-43175057)
[»] chr2 (37 HSPs)
chr2 (240-295)||(4758623-4758678)
chr2 (238-295)||(7552585-7552642)
chr2 (238-295)||(12889816-12889873)
chr2 (238-295)||(18176970-18177027)
chr2 (238-295)||(26738864-26738921)
chr2 (234-295)||(34119636-34119697)
chr2 (238-295)||(36802926-36802983)
chr2 (238-295)||(39213754-39213811)
chr2 (238-295)||(39449297-39449354)
chr2 (235-295)||(12498620-12498680)
chr2 (238-295)||(37257479-37257537)
chr2 (238-295)||(2464233-2464290)
chr2 (250-295)||(9377498-9377543)
chr2 (238-295)||(13347799-13347856)
chr2 (250-295)||(26206889-26206934)
chr2 (238-295)||(28245758-28245815)
chr2 (238-295)||(35589371-35589428)
chr2 (250-295)||(40937048-40937093)
chr2 (243-295)||(433885-433937)
chr2 (243-295)||(4952464-4952516)
chr2 (236-295)||(16799700-16799760)
chr2 (252-296)||(25881588-25881632)
chr2 (236-295)||(33616493-33616553)
chr2 (252-295)||(42678793-42678836)
chr2 (238-293)||(44254629-44254684)
chr2 (238-296)||(2841864-2841922)
chr2 (236-293)||(6336280-6336338)
chr2 (252-294)||(36517240-36517282)
chr2 (250-295)||(2221035-2221080)
chr2 (238-295)||(6999052-6999109)
chr2 (238-295)||(14233703-14233760)
chr2 (252-293)||(18723638-18723679)
chr2 (252-293)||(23352891-23352932)
chr2 (234-295)||(38560704-38560765)
chr2 (255-295)||(30546354-30546393)
chr2 (236-295)||(36774566-36774626)
chr2 (252-295)||(43650533-43650577)
[»] scaffold0221 (1 HSPs)
scaffold0221 (238-295)||(8244-8301)
[»] chr8 (34 HSPs)
chr8 (238-295)||(1633874-1633931)
chr8 (238-295)||(11017835-11017892)
chr8 (238-295)||(11657984-11658041)
chr8 (238-293)||(30136001-30136056)
chr8 (238-295)||(7592879-7592936)
chr8 (238-295)||(7955991-7956048)
chr8 (238-295)||(16966815-16966872)
chr8 (238-295)||(37783955-37784012)
chr8 (238-295)||(40739896-40739953)
chr8 (238-294)||(33589215-33589271)
chr8 (238-295)||(5277688-5277745)
chr8 (236-293)||(13970947-13971004)
chr8 (238-295)||(16327136-16327193)
chr8 (238-295)||(16872140-16872197)
chr8 (238-295)||(34718145-34718202)
chr8 (238-295)||(41159873-41159930)
chr8 (238-295)||(45529230-45529287)
chr8 (240-295)||(12655954-12656010)
chr8 (240-292)||(41521000-41521052)
chr8 (240-295)||(29028945-29029000)
chr8 (252-295)||(30439490-30439533)
chr8 (252-295)||(41541901-41541944)
chr8 (238-294)||(2730945-2731002)
chr8 (250-295)||(4994423-4994468)
chr8 (250-295)||(6991792-6991837)
chr8 (238-295)||(9549183-9549240)
chr8 (238-295)||(12707179-12707236)
chr8 (238-295)||(16613664-16613721)
chr8 (238-295)||(34018838-34018895)
chr8 (252-293)||(42569715-42569756)
chr8 (252-281)||(42886019-42886048)
chr8 (240-295)||(8671539-8671595)
chr8 (238-282)||(32847684-32847728)
chr8 (243-291)||(35564324-35564372)
[»] chr7 (35 HSPs)
chr7 (238-295)||(11564923-11564980)
chr7 (238-295)||(13162949-13163006)
chr7 (238-295)||(39231712-39231769)
chr7 (238-295)||(43573527-43573584)
chr7 (243-295)||(40353299-40353351)
chr7 (252-295)||(16708204-16708247)
chr7 (252-295)||(17682440-17682483)
chr7 (238-295)||(13729756-13729813)
chr7 (238-295)||(21023101-21023158)
chr7 (238-295)||(28036774-28036831)
chr7 (238-289)||(8929755-8929807)
chr7 (235-295)||(29162960-29163020)
chr7 (238-282)||(41402537-41402581)
chr7 (238-295)||(16980327-16980384)
chr7 (238-295)||(19786063-19786120)
chr7 (238-295)||(21559828-21559885)
chr7 (250-295)||(41399147-41399192)
chr7 (238-295)||(46812889-46812946)
chr7 (255-295)||(25067270-25067310)
chr7 (252-295)||(3293173-3293216)
chr7 (252-295)||(4713617-4713660)
chr7 (238-293)||(29002638-29002693)
chr7 (240-295)||(38779728-38779783)
chr7 (252-295)||(47078235-47078278)
chr7 (250-295)||(28249553-28249599)
chr7 (238-295)||(32815198-32815255)
chr7 (238-295)||(37808748-37808805)
chr7 (238-295)||(39332015-39332072)
chr7 (238-295)||(44184543-44184600)
chr7 (255-295)||(3343314-3343354)
chr7 (252-280)||(18067887-18067915)
chr7 (238-295)||(31398153-31398212)
chr7 (255-295)||(33180694-33180734)
chr7 (243-295)||(35588875-35588927)
chr7 (236-295)||(42584830-42584890)
[»] chr1 (49 HSPs)
chr1 (238-295)||(8411702-8411759)
chr1 (238-295)||(9008255-9008312)
chr1 (238-295)||(46172391-46172448)
chr1 (244-295)||(3024734-3024785)
chr1 (236-295)||(29586021-29586080)
chr1 (238-295)||(756886-756943)
chr1 (238-295)||(3603141-3603198)
chr1 (238-291)||(4514442-4514495)
chr1 (238-295)||(7128148-7128205)
chr1 (238-295)||(21486301-21486358)
chr1 (238-295)||(33024555-33024612)
chr1 (238-295)||(33054072-33054129)
chr1 (252-293)||(38713614-38713655)
chr1 (238-295)||(51286351-51286408)
chr1 (240-295)||(34040484-34040539)
chr1 (238-293)||(36577398-36577453)
chr1 (238-295)||(1790538-1790595)
chr1 (238-295)||(1852935-1852992)
chr1 (250-295)||(21093342-21093387)
chr1 (238-295)||(21340552-21340609)
chr1 (238-295)||(35136874-35136931)
chr1 (238-295)||(46082105-46082162)
chr1 (238-295)||(47214238-47214295)
chr1 (238-295)||(47721439-47721496)
chr1 (238-295)||(47728431-47728488)
chr1 (238-295)||(52362512-52362569)
chr1 (235-295)||(20565102-20565162)
chr1 (235-295)||(26837479-26837539)
chr1 (239-295)||(38303672-38303728)
chr1 (238-294)||(44294045-44294101)
chr1 (236-295)||(49931581-49931641)
chr1 (255-295)||(50824788-50824828)
chr1 (252-295)||(36494507-36494550)
chr1 (252-295)||(36673715-36673758)
chr1 (252-295)||(44632572-44632615)
chr1 (252-295)||(48220128-48220171)
chr1 (236-295)||(49559184-49559242)
chr1 (238-295)||(48325997-48326055)
chr1 (238-295)||(902668-902725)
chr1 (238-295)||(10890030-10890087)
chr1 (238-295)||(13489692-13489749)
chr1 (238-295)||(26585863-26585920)
chr1 (238-295)||(26967240-26967296)
chr1 (238-295)||(32915056-32915113)
chr1 (252-281)||(42598969-42598998)
chr1 (238-295)||(50328125-50328182)
chr1 (250-294)||(4469413-4469457)
chr1 (236-295)||(49570024-49570084)
chr1 (255-295)||(50882094-50882134)
[»] chr6 (27 HSPs)
chr6 (252-295)||(868936-868979)
chr6 (240-295)||(4820283-4820338)
chr6 (242-295)||(2075435-2075488)
chr6 (238-295)||(11547513-11547570)
chr6 (238-295)||(30036778-30036835)
chr6 (238-295)||(30152514-30152571)
chr6 (238-295)||(754422-754479)
chr6 (238-295)||(13143366-13143423)
chr6 (238-295)||(35213545-35213602)
chr6 (235-295)||(22341158-22341218)
chr6 (238-293)||(335093-335148)
chr6 (240-295)||(3610945-3611000)
chr6 (252-295)||(6531167-6531210)
chr6 (238-293)||(15318174-15318229)
chr6 (240-295)||(34504052-34504107)
chr6 (238-295)||(5327575-5327633)
chr6 (250-296)||(14699647-14699693)
chr6 (238-295)||(17551362-17551420)
chr6 (238-295)||(32459500-32459558)
chr6 (252-293)||(3199004-3199045)
chr6 (238-295)||(8747199-8747256)
chr6 (238-295)||(18141285-18141342)
chr6 (238-295)||(20822852-20822909)
chr6 (234-295)||(32046724-32046785)
chr6 (235-283)||(2777312-2777360)
chr6 (252-295)||(15974651-15974695)
chr6 (238-295)||(31869096-31869155)
[»] scaffold0687 (1 HSPs)
scaffold0687 (238-295)||(2227-2284)
[»] scaffold0532 (1 HSPs)
scaffold0532 (238-295)||(10994-11051)
[»] scaffold0449 (1 HSPs)
scaffold0449 (238-295)||(9233-9290)
[»] scaffold0204 (1 HSPs)
scaffold0204 (238-291)||(23106-23159)
[»] scaffold0321 (1 HSPs)
scaffold0321 (238-292)||(19666-19720)


Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 5 - 223
Target Start/End: Original strand, 21658618 - 21658836
Alignment:
Q  5 caatatttggtagaacctttggaacaactatggtgatatccttggcctgagcagcccagagggcctccaaccctaaattcagtgttgtttgggtgttgaa 104  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  21658618 caatatttggtagaacctttggaacaactaaggtgatatccttggactgagcagcccagagggcctctaaccctacattcagtgttgtttgggtgttgaa 21658717  T
Q  105 ttcctttatcatgatttttcaaggtgtgtttcaactaagactcgtgatattgatttatatgtaagaaatttgagaatcgtacatcatctaacattaatta 204  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21658718 ttcctttatcatgattcttcaaggtgtgtttcaactaagactcgtgatattgatttatatgtaagaaatttgagaatcgtacatcatctaacattaatta 21658817  T
Q  205 agagaaacgttatgtaacc 223  Q
    |||||||||||||||||||    
T  21658818 agagaaacgttatgtaacc 21658836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 11633642 - 11633700
Alignment:
Q  237 aacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||||    
T  11633642 aacaacttttgcaacaactttctctctcatattcacattactttttactttatctctct 11633700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 32767706 - 32767763
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||||||||||||| ||| ||||||||||| |||||||||||    
T  32767706 acaacttttgcaataattttctctctcatactcacattattttttactttatctctct 32767763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 10207014 - 10206956
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctctg 296  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| ||||||||||||    
T  10207014 acaacttttgcaacaactttctctctcatactcacattactttttactttatctctctg 10206956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 235 - 293
Target Start/End: Original strand, 26996343 - 26996401
Alignment:
Q  235 gtaacaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| || |||||||||||||||| ||| ||||||||||| |||||||||    
T  26996343 gtaacaacttttgtaacaactttctctctcatactcacattattttttactttatctct 26996401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 8821660 - 8821717
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| || |||||||||||||||| ||| ||||||||||| |||||||||||    
T  8821660 acaacttttgtaacaactttctctctcatactcacattattttttactttatctctct 8821717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 30909059 - 30909116
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||| ||||||| |||| |||||| |||||||||||    
T  30909059 acaacttttgcaacaactttctctcttatattcacattactttttactttatctctct 30909116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 44677525 - 44677468
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| || ||||||||||||| ||| ||||||||||| |||||||||||    
T  44677525 acaacttttgcaacaattttctctctcatactcacattattttttactttatctctct 44677468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 49363292 - 49363235
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  49363292 acaacttttgcaacaactttctctctcatactcacattactttttactttatctctct 49363235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 49417605 - 49417662
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||||||||||||||||||||||    
T  49417605 acaacttttgtgacaactttctctctcatactcacattattttttattttatctctct 49417662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 50207011 - 50206954
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  50207011 acaacttttgcaacaactttctctctcatactcacattactttttactttatctctct 50206954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 390841 - 390896
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||| ||||||||| ||| ||||||||||| |||||||||||    
T  390841 aacttttgcaacaactttttctctcatactcacattattttttactttatctctct 390896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 24483004 - 24482949
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||    
T  24483004 acaacttttgcaacaactttctctctcatactcacattactttttactttatctct 24482949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 29634111 - 29634056
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| || ||||||||| |||||||||||||||||||  ||||||||||    
T  29634111 aacttttgcaacaattttctctcttatattcatattattttttacattatctctct 29634056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 37508537 - 37508482
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  37508537 aacttttgcaacaactttctctctcatactcacattactttttactttatctctct 37508482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 295
Target Start/End: Complemental strand, 32421659 - 32421613
Alignment:
Q  249 aataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||    
T  32421659 aataactttctctctcatactcatatcattttttactttatctctct 32421613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 33375890 - 33375947
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||| ||| || ||||||||||||| ||| ||||||||||| |||||||||||    
T  33375890 acaacttttacaacaattttctctctcatactcacattattttttactttatctctct 33375947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 39020200 - 39020143
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||| |||||||||| ||||||||| ||| |||| |||||| |||||||||||    
T  39020200 acaacttttacaataactttttctctcatactcacattactttttactttatctctct 39020143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 284
Target Start/End: Complemental strand, 3347161 - 3347117
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttat 284  Q
    ||||||||| | |||||||||||||||||||| ||||||||||||    
T  3347161 aacttttgctacaactttctctctcatattcacattattttttat 3347117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 22371223 - 22371278
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| ||||| ||||||||||||| | | ||||||||||| |||||||||||    
T  22371223 aacttttgtaataattttctctctcatacttacattattttttactttatctctct 22371278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 28419257 - 28419198
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||| |||||||| | ||||| | | ||||||||||| |||||||||||    
T  28419257 taacaacttttgcaacaactttctttttcatacttacattattttttactttatctctct 28419198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 49761351 - 49761394
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  49761351 aactttctctctcatactcacattattttttactttatctctct 49761394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 8846519 - 8846577
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattattttttattttatctctc 294  Q
    ||||||||||||  | || ||||||||||||| ||| ||||||||||| ||||||||||    
T  8846519 taacaacttttgtgacaattttctctctcatactcacattattttttactttatctctc 8846577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 34456820 - 34456878
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    ||||||||||  |||||||||||||||||| ||||||||| |||||| ||| |||||||    
T  34456820 acaacttttgtgataactttctctctcatactcatattatctttttactttctctctct 34456878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 39671139 - 39671081
Alignment:
Q  238 acaacttttgcaataactttctctc-tcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| ||||||||||| ||||| ||| |||| |||||| |||||||||||    
T  39671139 acaacttttgcaacaactttctctcttcatactcacattactttttactttatctctct 39671081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 295
Target Start/End: Complemental strand, 51465940 - 51465898
Alignment:
Q  253 actttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||| |||||||| |||||| |||||||||||    
T  51465940 actttctctctcatactcatattactttttactttatctctct 51465898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 54773795 - 54773737
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattatt-ttttattttatctctct 295  Q
    |||||||||  || |||||||||||||||| |||||||||| ||||| |||||||||||    
T  54773795 acaacttttataacaactttctctctcatactcatattatttttttactttatctctct 54773737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 286
Target Start/End: Original strand, 55013035 - 55013081
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattt 286  Q
    ||||||||||| |||||||||||| ||||||| |||| |||||||||    
T  55013035 aacttttgcaacaactttctctcttatattcacattactttttattt 55013081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 27718831 - 27718770
Alignment:
Q  234 tgtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||  | |||||||||||||||| ||| ||   ||||||||||||||||||    
T  27718831 tgtaacaacttttgtgacaactttctctctcatactcacatatgtttttattttatctctct 27718770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 37927246 - 37927189
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| || |||||||| |||||||||||    
T  37927246 acaacttttgtgacaactttctctctcatactcacataattttttactttatctctct 37927189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 46019492 - 46019549
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  46019492 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 46019549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 46253652 - 46253709
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| || ||| ||||||||| ||| |||| |||||| |||||||||||    
T  46253652 acaacttttgcaacaattttttctctcatactcacattactttttactttatctctct 46253709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 55400029 - 55400086
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  55400029 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 55400086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 39697258 - 39697206
Alignment:
Q  243 ttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||| || |||||||||||||||| ||| |||| |||||| |||||||||||    
T  39697258 ttttgtaacaactttctctctcatactcacattactttttactttatctctct 39697206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 43905008 - 43905060
Alignment:
Q  243 ttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||| || |||||||||||||||| ||| |||| |||||| |||||||||||    
T  43905008 ttttgtaacaactttctctctcatactcacattactttttactttatctctct 43905060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 48353024 - 48353084
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    ||||||||||||  | |||||||||||||||| ||||||||| |||||| ||| |||||||    
T  48353024 taacaacttttgtgacaactttctctctcatactcatattatatttttactttctctctct 48353084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 15267814 - 15267871
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  15267814 acaacttttgcaacaactttctctctcatattcatattattttttactttatctctct 15267871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 35099046 - 35098989
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  35099046 acaacttttgcaacaactttctctctcatactcacattattttttactttatctctct 35098989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 43441764 - 43441825
Alignment:
Q  234 tgtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  43441764 tgtaacaacttttgcaacaactttctctctcatactcacattactttttactttatctctct 43441825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 18842360 - 18842305
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  18842360 aacttttgcaacaactttctctctcatactcacattattttttactttatctctct 18842305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Original strand, 15478690 - 15478744
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctc 294  Q
    |||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||||    
T  15478690 aacttttgcaataattttctctctcatactcacattattttttactttatctctc 15478744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 2689027 - 2688970
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||| ||||||| | ||||||||||| |||||||||||    
T  2689027 acaacttttgcaacaactttctctttcatatttacattattttttactttatctctct 2688970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 8267861 - 8267805
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctc 294  Q
    |||| |||||||| |||||||||||||||| ||| ||||||||||| ||||||||||    
T  8267861 acaatttttgcaacaactttctctctcatactcacattattttttactttatctctc 8267805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 292
Target Start/End: Complemental strand, 21064267 - 21064213
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctc 292  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| ||||||||    
T  21064267 acaacttttgcaacaactttctctctcatactcacattactttttactttatctc 21064213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 4430977 - 4430920
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||| ||||||||| ||| || |||||||| |||||||||||    
T  4430977 acaacttttgcaacaactttttctctcatactcacatcattttttactttatctctct 4430920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 5042278 - 5042335
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| |||||||| |||||| ||||||||| ||| ||||||||||| |||||||||||    
T  5042278 acaatttttgcaacaactttatctctcatactcacattattttttactttatctctct 5042335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 287
Target Start/End: Original strand, 12878786 - 12878823
Alignment:
Q  250 ataactttctctctcatattcatattattttttatttt 287  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  12878786 ataactttctctctcatattcatattattttttttttt 12878823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 20770161 - 20770218
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  20770161 acaacttttgtgacaactttctctctcatactcacattattttttactttatctctct 20770218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 30640820 - 30640877
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||||| | ||||||||||| |||||||||||    
T  30640820 acaacttttgttacaactttctctctcatatttacattattttttactttatctctct 30640877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 33620638 - 33620695
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| || ||| ||||||||| | ||||||||||||| |||||||||||    
T  33620638 acaacttttgcaacaattttttctctcatacttatattattttttactttatctctct 33620695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 16437606 - 16437562
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattatttttt 282  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||    
T  16437606 acaacttttgcaacaactttctctctcatactcacattatttttt 16437562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 6931098 - 6931043
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||| ||| ||||| ||| ||||||||||| |||||||||||    
T  6931098 aacttttgcaacaactttatctttcatactcacattattttttactttatctctct 6931043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 8675472 - 8675417
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| || ||||||||||||| ||| |||| |||||| |||||||||||    
T  8675472 aacttttgcaacaattttctctctcatactcacattactttttactttatctctct 8675417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 15953072 - 15953029
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||    
T  15953072 aactttttctctcatactcatattattttttactttatctctct 15953029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 41175733 - 41175690
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  41175733 aactttctctctcatactcacattattttttactttatctctct 41175690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 4771527 - 4771584
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| |||||| | ||||||||||  |||| ||| |||||||||||||||||||||||    
T  4771527 acaaattttgctacaactttctcttgcatactcacattattttttattttatctctct 4771584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 6517742 - 6517799
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  6517742 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 6517799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 25871487 - 25871430
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| |||||| |||| ||||||||||||  ||| ||||||||||| |||||||||||    
T  25871487 acaatttttgctataattttctctctcatgctcacattattttttactttatctctct 25871430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 277
Target Start/End: Complemental strand, 32360526 - 32360489
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattat 277  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  32360526 aacttttgccataattttctctctcatattcatattat 32360489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 37700502 - 37700547
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||||| ||| |||||||||||  ||||||||||    
T  37700502 ataactttctctctcatactcacattattttttaccttatctctct 37700547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 39628819 - 39628872
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatct 291  Q
    ||||||||||  | |||||||||||||||||||| ||||||||| | |||||||    
T  39628819 acaacttttgtgacaactttctctctcatattcacattatttttaactttatct 39628872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 8097281 - 8097337
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatatta-ttttttattttatctctct 295  Q
    ||||||||  ||||||||||| |||||| |||||||| ||||||||||| |||||||    
T  8097281 aacttttgtgataactttctcactcatactcatattatttttttattttttctctct 8097337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 14321998 - 14321938
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    ||||||||||||  | |||||||||||||||||||||||| | | |||||||| |||||||    
T  14321998 taacaacttttgtgacaactttctctctcatattcatattgtatatttattttctctctct 14321938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 251 - 295
Target Start/End: Complemental strand, 18397193 - 18397149
Alignment:
Q  251 taactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||||| | | |||| ||||||||||||||||||    
T  18397193 taactttctctctcatacttacattactttttattttatctctct 18397149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 31683525 - 31683493
Alignment:
Q  250 ataactttctctctcatattcatattatttttt 282  Q
    |||||||||||||||||||||||||||| ||||    
T  31683525 ataactttctctctcatattcatattatgtttt 31683493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 32639086 - 32639129
Alignment:
Q  252 aactttctctctcatattcata--ttattttttattttatctct 293  Q
    ||||||||||||||||||||||  |||||||||||||| |||||    
T  32639086 aactttctctctcatattcatattttattttttattttttctct 32639129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 23822286 - 23822231
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||    
T  23822286 acaacttttgcaacaactttctccctcatattcatattattttttactttatctct 23822231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 30079876 - 30079933
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  30079876 acaacttttgcaacaactttctctctcatactcacattattttttactttatctctct 30079933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 12112671 - 12112714
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  12112671 aactttctctctcatattcatattattttttactttatctctct 12112714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 35820200 - 35820258
Alignment:
Q  237 aacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| ||| ||||||||||||||||||||||||| |||||| ||| |||||||    
T  35820200 aacaacttttacaacaactttctctctcatattcatattactttttactttttctctct 35820258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 624353 - 624296
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  624353 acaacttttgcaacaactttctctctcatactcacattactttttactttatctctct 624296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 9118905 - 9118848
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| || ||||||||||||| ||| ||||||||||| |||||||||||    
T  9118905 acaacttttgcaacaattttctctctcataatcacattattttttactttatctctct 9118848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 13086052 - 13086109
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| || |||||||||||||||| ||| |||| ||||||||||||||||||    
T  13086052 acaacttttgtaacaactttctctctcatactcacattactttttattttatctctct 13086109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 14010159 - 14010102
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||| |||||||||| ||||||||| |||||||| |||||| |||||||||||    
T  14010159 acaacttttacaataactttttctctcatactcatattactttttactttatctctct 14010102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 51887693 - 51887750
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  51887693 acaacttttgctacaactttctctctcatactcaaattattttttactttatctctct 51887750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 53152360 - 53152307
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||| || ||| ||||||||||||||||||||||||| |||||||||    
T  53152360 aacttttgcaacaattttttctctcatattcatattattttttactttatctct 53152307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 6494920 - 6494877
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||||||||||||||||||| ||||| |||||    
T  6494920 aactttctctctcatattcatattattttttactttatttctct 6494877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 22819679 - 22819734
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||    
T  22819679 acaacttttgcaacaactttctctctcatactcacattactttttactttatctct 22819734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 41486182 - 41486127
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  41486182 aacttttgcaacaactttctctctcatactcacattactttttactttatctctct 41486127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 282
Target Start/End: Original strand, 20118809 - 20118855
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattatttttt 282  Q
    |||||||||||||||||||||||||||| ||||||| ||||| ||||    
T  20118809 taacaacttttgcaataactttctctcttatattcacattatatttt 20118855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 53654777 - 53654735
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctc 294  Q
    |||||||||| ||||||||||||||||||||| ||||||||||    
T  53654777 aactttctctttcatattcatattattttttactttatctctc 53654735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 14451423 - 14451480
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| |||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  14451423 acaactttagcaacaactttctctctcatactcacattagtttttactttatctctct 14451480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 21260328 - 21260385
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||| ||||||||| ||| ||||||||||  |||||||||||    
T  21260328 acaacttttgcaacaactttttctctcatactcacattatttttttctttatctctct 21260385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 293
Target Start/End: Complemental strand, 25318104 - 25318051
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||| | || ||||||||||||| ||||||||||||||| |||||||||    
T  25318104 aacttttgcgacaattttctctctcatactcatattattttttactttatctct 25318051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 28458418 - 28458361
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  28458418 acaacttttgtgacaactttctctctcatactcacattattttttactttatctctct 28458361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 30170061 - 30170004
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  30170061 acaacttttgtgacaactttctctctcatactcacattattttttactttatctctct 30170004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 36111440 - 36111379
Alignment:
Q  235 gtaacaacttttgcaataactttctctctcatattcatatta-ttttttattttatctctct 295  Q
    |||||||||||||||| |||||| ||||||||| ||| |||| ||||||| |||||||||||    
T  36111440 gtaacaacttttgcaacaactttatctctcatactcacattacttttttactttatctctct 36111379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 39345021 - 39344964
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| |||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  39345021 acaatttttgcaacaactttctctctcatactcacattactttttactttatctctct 39344964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 46406015 - 46405958
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||| ||||||||| ||| |||| |||||| |||||||||||    
T  46406015 acaacttttgcaacaactttttctctcatactcacattaatttttactttatctctct 46405958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 47099052 - 47099109
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| ||||||||||| |||| ||| |||| |||||| |||||||||||    
T  47099052 acaacttttgcaacaactttctctcacatactcacattactttttactttatctctct 47099109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 48335584 - 48335637
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatct 291  Q
    |||| |||||||| || ||||||||||||||||| ||||||||||| |||||||    
T  48335584 acaatttttgcaacaattttctctctcatattcacattattttttactttatct 48335637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 5932198 - 5932154
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattatttttt 282  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||    
T  5932198 acaacttttgcaacaactttctctctcatactcacattatttttt 5932154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 26207013 - 26206961
Alignment:
Q  243 ttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| || ||||||||||||||||| |||| |||||| |||||||||||    
T  26207013 ttttgcaacaattttctctctcatattcacattactttttactttatctctct 26206961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 49768354 - 49768302
Alignment:
Q  243 ttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||| | |||||||||||| ||| ||||||||||||||| |||||||||||    
T  49768354 ttttgctacaactttctctctaatactcatattattttttactttatctctct 49768302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 6141819 - 6141764
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| |||||||||||||||| ||| |||| | |||| |||||||||    
T  6141819 acaacttttgcaacaactttctctctcatactcacattactctttactttatctct 6141764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 14527674 - 14527729
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||| | ||||||| |||||||| ||| ||||||||||| |||||||||    
T  14527674 acaacttttgctacaactttcactctcatactcacattattttttactttatctct 14527729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 21617227 - 21617270
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  21617227 aactttctctctcatactcacattattttttactttatctctct 21617270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 28657468 - 28657425
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  28657468 aactttctctctcatactcacattattttttactttatctctct 28657425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 293
Target Start/End: Original strand, 32696223 - 32696266
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctct 293  Q
    |||||||||||||||||||||| ||| ||||||| |||||||||    
T  32696223 ataactttctctctcatattcacattgttttttactttatctct 32696266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 47965769 - 47965824
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| |||||| ||||||||| ||| |||| |||||| |||||||||    
T  47965769 acaacttttgcaacaactttttctctcatactcacattactttttactttatctct 47965824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 11546930 - 11546884
Alignment:
Q  250 ataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    |||||||||||||||||||||||||||| |||||| ||| |||||||    
T  11546930 ataactttctctctcatattcatattatatttttactttctctctct 11546884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Complemental strand, 22027466 - 22027428
Alignment:
Q  255 tttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  22027466 tttctctctcatactcatattatgttttattttatctct 22027428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 2256371 - 2256314
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||| ||||| |||||| |||||||| |||||||||||    
T  2256371 acaacttttgtgacaactttctctatcatactcatataattttttactttatctctct 2256314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 9362719 - 9362663
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||| ||||||||||||||||| ||||| |||||||||||    
T  9362719 acaacttttgtgacaactttctatctcatattcatattat-ttttactttatctctct 9362663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 13263438 - 13263381
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| | |||||||||||| ||| |||  |||||||||| |||||||||||    
T  13263438 acaacttttgctacaactttctctcttatactcactttattttttactttatctctct 13263381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 33899367 - 33899310
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||| || |||| ||| ||||||||||  |||||||||||    
T  33899367 acaacttttgcaacaactttctttcacatactcacattatttttttctttatctctct 33899310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 38338963 - 38338906
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  38338963 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 38338906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 39312643 - 39312602
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctct 293  Q
    |||||||||||||||| ||| |||||||||||| ||||||||    
T  39312643 aactttctctctcatactcacattattttttatattatctct 39312602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 43769755 - 43769796
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctct 293  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  43769755 aactttctctctcatactcacattattttttactttatctct 43769796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 1796025 - 1795965
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    ||||||||||||  |||||||| ||||||||| ||| ||||| |||||| |||||||||||    
T  1796025 taacaacttttgtgataactttatctctcatactcacattatatttttactttatctctct 1795965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 26910231 - 26910275
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattatttttt 282  Q
    ||||||||||  | ||||||||||||| |||||||||||||||||    
T  26910231 acaacttttgtgacaactttctctctcgtattcatattatttttt 26910275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 31076081 - 31076141
Alignment:
Q  235 gtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| ||  | |||||||||||||||| ||| || |||||||| |||||||||||    
T  31076081 gtaacaacttctgggacaactttctctctcatactcacatcattttttactttatctctct 31076141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 39478464 - 39478508
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattatttttt 282  Q
    ||||||||||  | |||||||||||||||| ||||||||||||||    
T  39478464 acaacttttgtgacaactttctctctcatactcatattatttttt 39478508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 43175013 - 43175057
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattatttttt 282  Q
    ||||||||||  |||||||||||||||||| ||| ||||||||||    
T  43175013 acaacttttgtgataactttctctctcatactcacattatttttt 43175057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 5e-16; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 4758678 - 4758623
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  4758678 aacttttgcaacaactttctctttcatattcacattattttttattttatctctct 4758623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 7552585 - 7552642
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| || |||||||||||||||||| |||||| ||||||||||||||||||    
T  7552585 acaacttttgtaacaactttctctctcatatttatattactttttattttatctctct 7552642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 12889873 - 12889816
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  12889873 acaacttttgctacaactttctctctcatactcacattattttttaatttatctctct 12889816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 18176970 - 18177027
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||  |||||||||||    
T  18176970 acaacttttgcaacaactttctctctcatactcacattatttttttctttatctctct 18177027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 26738921 - 26738864
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||| ||||||| | | |||||||||||||||||||||||    
T  26738921 acaacttttgcaacaactttctttctcatacttacattattttttattttatctctct 26738864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 34119697 - 34119636
Alignment:
Q  234 tgtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| | | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  34119697 tgtaacaacttttacgacaactttctctctcatactcacattattttttactttatctctct 34119636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 36802926 - 36802983
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  36802926 acaacttttgctacaactttctctctcatactcacattattttttactttatctctct 36802983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 39213811 - 39213754
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||| ||||||||| ||| ||||||||||| |||||||||||    
T  39213811 acaacttttgcaacaactttatctctcatactcacattattttttactttatctctct 39213754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 39449297 - 39449354
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  39449297 acaacttttgcaacaactttctctctcatactcagattactttttactttatctctct 39449354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 12498680 - 12498620
Alignment:
Q  235 gtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||| |||||  | |||||| ||||||||| |||||||||||||||||||||||||||    
T  12498680 gtaacaatttttgtgacaactttttctctcatactcatattattttttattttatctctct 12498620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 37257479 - 37257537
Alignment:
Q  238 acaacttttgcaataactttctctctca-tattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||| || ||| ||||||||||| |||||||||||    
T  37257479 acaacttttgcaacaactttctctctcattactcacattattttttactttatctctct 37257537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 2464290 - 2464233
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||| ||||||||||||||||||||| | |||||||||||    
T  2464290 acaacttttgtgacaactttctttctcatattcatattatttttaactttatctctct 2464233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 9377498 - 9377543
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||||||||| |||| |||||| |||||||||||    
T  9377498 ataactttctctctcatattcacattactttttactttatctctct 9377543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 13347856 - 13347799
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| |||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  13347856 acaatttttgcaacaactttctctctcatactcacattactttttactttatctctct 13347799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 26206889 - 26206934
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  26206889 ataactttctctctcatactcacattattttttactttatctctct 26206934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 28245758 - 28245815
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  28245758 acaacttttgtgacaactttctctctcatactcacattattttttactttatctctct 28245815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 35589428 - 35589371
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| || ||||||||||||| ||| |||| |||||| |||||||||||    
T  35589428 acaacttttgcaacaattttctctctcatactcacattactttttactttatctctct 35589371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 40937093 - 40937048
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  40937093 ataactttctctctcatactcacattattttttactttatctctct 40937048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 433885 - 433937
Alignment:
Q  243 ttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| |||||||||||||||| ||| || |||||||| |||||||||||    
T  433885 ttttgcaacaactttctctctcatactcacatcattttttactttatctctct 433937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 4952516 - 4952464
Alignment:
Q  243 ttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| |||||||| | ||||||||| ||||||||||| |||||||||||    
T  4952516 ttttgcaacaactttctatttcatattcacattattttttactttatctctct 4952464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 16799700 - 16799760
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    |||||| |||||  |||||||||||||||||| ||||||||| |||||||||| |||||||    
T  16799700 taacaatttttgtgataactttctctctcatactcatattatatttttattttctctctct 16799760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 25881588 - 25881632
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctctg 296  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||||    
T  25881588 aactttctctctcatactcacattattttttactttatctctctg 25881632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 33616493 - 33616553
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    |||||| |||||  |||||||||||||||||||||||||||| |||||| ||| |||||||    
T  33616493 taacaaattttgtgataactttctctctcatattcatattatatttttactttctctctct 33616553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 42678793 - 42678836
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  42678793 aactttctctctcatactcacattattttttactttatctctct 42678836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 44254629 - 44254684
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||  | |||||||||||||||| || |||||||||||| |||||||||    
T  44254629 acaacttttgttacaactttctctctcatactcgtattattttttactttatctct 44254684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 296
Target Start/End: Original strand, 2841864 - 2841922
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctctg 296  Q
    ||||||||||  | |||||||| ||||||| ||| ||||||||||| ||||||||||||    
T  2841864 acaacttttgttacaactttctttctcatactcacattattttttactttatctctctg 2841922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 6336280 - 6336338
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctct 293  Q
    ||||||||||||  | |||||||||||||||| ||||||||| |||||||||| |||||    
T  6336280 taacaacttttgtgacaactttctctctcatactcatattatatttttattttctctct 6336338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 36517240 - 36517282
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctc 294  Q
    |||||||||| | ||||||||||||||||||| ||||||||||    
T  36517240 aactttctcttttatattcatattattttttactttatctctc 36517282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 2221035 - 2221080
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||||| ||| ||||||||| | |||||||||||    
T  2221035 ataactttctctctcatactcacattatttttcactttatctctct 2221080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 6999109 - 6999052
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  6999109 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 6999052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 14233760 - 14233703
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | || ||||||||||||| |||||||| |||||| |||||||||||    
T  14233760 acaacttttgtgacaaatttctctctcatactcatattactttttactttatctctct 14233703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 18723638 - 18723679
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctct 293  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  18723638 aactttctctctcatactcacattattttttactttatctct 18723679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 23352932 - 23352891
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctct 293  Q
    |||||||||||||||| ||| ||||||||||| |||||||||    
T  23352932 aactttctctctcatactcacattattttttactttatctct 23352891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 38560704 - 38560765
Alignment:
Q  234 tgtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||  | |||||||| | ||||| ||| ||||||||||| |||||||||||    
T  38560704 tgtaacaacttttgttacaactttctttgtcatactcacattattttttactttatctctct 38560765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 30546393 - 30546354
Alignment:
Q  255 tttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  30546393 tttctctctcatattcatattat-ttttactttatctctct 30546354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 36774566 - 36774626
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    ||||||||||||  | |||||||||||||||||||| ||||| |||||| ||| |||||||    
T  36774566 taacaacttttgagacaactttctctctcatattcacattatatttttactttctctctct 36774626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 43650577 - 43650533
Alignment:
Q  252 aactttctctctcatattcatattat-tttttattttatctctct 295  Q
    |||||||||||||||||||||||||| |||||||| | |||||||    
T  43650577 aactttctctctcatattcatattatatttttattctctctctct 43650533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 8244 - 8301
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||| |||||| ||||    
T  8244 acaacttttgcaacaactttctctctcatattcatattactttttactttatccctct 8301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 1633931 - 1633874
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  1633931 acaacttttgcaacaactttctctctcatactcacattattttttactttatctctct 1633874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 11017835 - 11017892
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  11017835 acaacttttgcaacaactttctctctcatactcacattattttttactttatctctct 11017892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 11658041 - 11657984
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||    
T  11658041 acaacttttgcaacaactttctctctcatactcacattactttttattttatctctct 11657984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 30136056 - 30136001
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||    
T  30136056 acaacttttgcaacaactttctctctcatattcacattactttttactttatctct 30136001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 7592879 - 7592936
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||| ||||||||| ||| ||||||||||| |||||||||||    
T  7592879 acaacttttgcaacaactttatctctcatagtcacattattttttactttatctctct 7592936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 7956048 - 7955991
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  7956048 acaacttttgcaacaactttctctctcatactcacattactttttactttatctctct 7955991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 16966815 - 16966872
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||||||| || |||||||||||    
T  16966815 acaacttttgcaacaactttctctctcatactcacattattttctactttatctctct 16966872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 37784012 - 37783955
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  37784012 acaacttttgcaacaactttctctctcatactcagattactttttactttatctctct 37783955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 40739953 - 40739896
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| || ||| ||||||||||||| ||||||||||| |||||||||||    
T  40739953 acaacttttgcaacaattttttctctcatattcacattattttttactttatctctct 40739896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 33589271 - 33589215
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctc 294  Q
    ||||||||||||| || ||||||||||||| ||| ||||||||||| ||||||||||    
T  33589271 acaacttttgcaacaattttctctctcatactcacattattttttactttatctctc 33589215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 5277745 - 5277688
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||| ||||| | || ||||||||||||| ||| |||||||||||||||||||||||    
T  5277745 acaacctttgctacaattttctctctcatactcacattattttttattttatctctct 5277688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 293
Target Start/End: Original strand, 13970947 - 13971004
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||  | |||||||||||||||| ||||||||| ||||||||| |||||    
T  13970947 taacaacttttgtgacaactttctctctcatactcatattatattttattttctctct 13971004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 16327193 - 16327136
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  16327193 acaacttttgcgacaactttctctctcatactcacattactttttactttatctctct 16327136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 16872197 - 16872140
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||| ||||| ||| |||| |||||| |||||||||||    
T  16872197 acaacttttgcaacaactttctctatcatactcacattactttttactttatctctct 16872140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 34718145 - 34718202
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  34718145 acaacttttgttacaactttctctctcatactcacattattttttactttatctctct 34718202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 41159930 - 41159873
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  41159930 acaacttttgtgacaactttctctctcatactcacattattttttactttatctctct 41159873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 45529287 - 45529230
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| ||||| || |||||||||||||||| ||| ||||||||||| |||||||||||    
T  45529287 acaatttttgtaacaactttctctctcatactcacattattttttactttatctctct 45529230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 12655954 - 12656010
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    |||||||| ||||||||| ||||||||||||||||||| |||||| ||| |||||||    
T  12655954 aacttttgtaataactttttctctcatattcatattatatttttactttctctctct 12656010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 292
Target Start/End: Original strand, 41521000 - 41521052
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctc 292  Q
    ||||||||||| || ||||||||||||| ||| ||||||||||| ||||||||    
T  41521000 aacttttgcaacaattttctctctcatactcacattattttttactttatctc 41521052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 29029000 - 29028945
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||| | |||||||||||| ||| ||| ||||||||||| |||||||||||    
T  29029000 aacttttgctacaactttctctcttatactcacattattttttaatttatctctct 29028945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 30439533 - 30439490
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  30439533 aactttctctctcatactcacattattttttactttatctctct 30439490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 41541901 - 41541944
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||| ||| ||| |||||||||||||||||||||||    
T  41541901 aactttctctcttatactcacattattttttattttatctctct 41541944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 2731002 - 2730945
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattat-tttttattttatctctc 294  Q
    |||||||||| || |||||||||||||||||||| ||||| |||||| ||| ||||||    
T  2731002 acaacttttgtaacaactttctctctcatattcacattatctttttactttctctctc 2730945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 4994423 - 4994468
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| ||||||||| ||| ||||||||||| |||||||||||    
T  4994423 ataactttatctctcatactcacattattttttactttatctctct 4994468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 6991837 - 6991792
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| ||||||||||||| ||| ||||||||||| |||||||||||    
T  6991837 ataattttctctctcatactcacattattttttactttatctctct 6991792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 9549240 - 9549183
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | || ||||||||||||| ||| ||||||||||| |||||||||||    
T  9549240 acaacttttgtgacaattttctctctcatactcacattattttttactttatctctct 9549183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 12707179 - 12707236
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| | |||||||||||||||| |||  ||| |||||| |||||||||||    
T  12707179 acaacttttgcgacaactttctctctcatactcacgttactttttaatttatctctct 12707236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 16613664 - 16613721
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| |||||| | |||||| ||||||||| ||| ||||||||||| |||||||||||    
T  16613664 acaatttttgctacaactttttctctcatactcacattattttttactttatctctct 16613721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 34018838 - 34018895
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| || ||||||||||||| ||| |||| |||||| |||||| ||||    
T  34018838 acaacttttgcaacaattttctctctcatactcacattactttttactttatcactct 34018895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Complemental strand, 42569756 - 42569715
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctct 293  Q
    |||||||||||||||||||| |||| |||||| |||||||||    
T  42569756 aactttctctctcatattcacattactttttactttatctct 42569715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Original strand, 42886019 - 42886048
Alignment:
Q  252 aactttctctctcatattcatattattttt 281  Q
    ||||||||||||||||||||||||||||||    
T  42886019 aactttctctctcatattcatattattttt 42886048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 8671595 - 8671539
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    |||||||| ||||||||||||||||||| ||  ||||| |||||| |||||||||||    
T  8671595 aacttttgtaataactttctctctcatactcgcattatatttttactttatctctct 8671539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 282
Target Start/End: Complemental strand, 32847728 - 32847684
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattatttttt 282  Q
    ||||||||||||| |||||||||||| ||| ||| ||||||||||    
T  32847728 acaacttttgcaacaactttctctcttatactcacattatttttt 32847684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 35564324 - 35564372
Alignment:
Q  243 ttttgcaataactttctctctcatattcatattattttttattttatct 291  Q
    |||||||| |||||||| ||||||| ||| ||||||||||| |||||||    
T  35564324 ttttgcaacaactttctatctcatactcacattattttttactttatct 35564372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 11564923 - 11564980
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||    
T  11564923 acaacttttgctataactttctctctcatactcacattattttttactttatctctct 11564980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 13162949 - 13163006
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||| |||||||||||    
T  13162949 acaacttttgcaacaactttctctctcatactcatattactttttactttatctctct 13163006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 39231769 - 39231712
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  39231769 acaacttttgcaacaactttctctctcatactcacattattttttactttatctctct 39231712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 43573584 - 43573527
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||||    
T  43573584 acaacttttgcaacaactttctctctcatattcacattactttttactttatctctct 43573527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 40353299 - 40353351
Alignment:
Q  243 ttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  40353299 ttttgcaacaactttctctctcatactcacattattttttattttatctctct 40353351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 16708204 - 16708247
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  16708204 aactttctttctcatattcatattattttttattttatctctct 16708247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 17682440 - 17682483
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  17682440 aactttctttctcatattcatattattttttattttatctctct 17682483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 13729756 - 13729813
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||| ||||||| ||| ||||||||||| |||||||||||    
T  13729756 acaacttttgcaacaactttctttctcatactcacattattttttactttatctctct 13729813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 21023158 - 21023101
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||| ||||||| ||||||||| ||||||||||| |||||||||||    
T  21023158 acaacttttgcgataattttctctttcatattcacattattttttactttatctctct 21023101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 28036774 - 28036831
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||| ||| ||| ||||||||||| |||||||||||    
T  28036774 acaacttttgcaacaactttctctcttatactcacattattttttactttatctctct 28036831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 8929755 - 8929807
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattat-tttttattttat 289  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||    
T  8929755 acaacttttgcaataattttctctctcatatttatattatgtttttattttat 8929807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 29163020 - 29162960
Alignment:
Q  235 gtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||| ||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  29163020 gtaacaacttttacaacaactttctctctcatactcacattactttttactttatctctct 29162960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 238 - 282
Target Start/End: Original strand, 41402537 - 41402581
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattatttttt 282  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||    
T  41402537 acaacttttgcaacaactttctctctcatactcatattatttttt 41402581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 16980327 - 16980384
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||| ||| ||| |||| |||||| |||||||||||    
T  16980327 acaacttttgcaacaactttctctcttatactcacattactttttactttatctctct 16980384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 19786120 - 19786063
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| ||||||||||| |||| ||| |||| |||||| |||||||||||    
T  19786120 acaacttttgcaacaactttctctcacatactcacattactttttactttatctctct 19786063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 21559828 - 21559885
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| | |||||| ||||||||| ||| ||||||||||| |||||||||||    
T  21559828 acaacttttgctacaactttatctctcatactcacattattttttactttatctctct 21559885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 41399192 - 41399147
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||    
T  41399192 ataactttatctctcatactcatattattttttactttatctctct 41399147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 46812946 - 46812889
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| | |||||||||||| ||||| | ||||||||||| |||||||||||    
T  46812946 acaacttttgctacaactttctctcttatatttacattattttttactttatctctct 46812889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 25067270 - 25067310
Alignment:
Q  255 tttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  25067270 tttctctcttatattcatattattttttactttatctctct 25067310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 3293173 - 3293216
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||||||| || |||||||| |||||||||||    
T  3293173 aactttctctctcatattcacataattttttactttatctctct 3293216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 4713617 - 4713660
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||| ||||| ||||||||||| |||||||||||    
T  4713617 aactttctctctcaaattcacattattttttactttatctctct 4713660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 29002638 - 29002693
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| ||||||||||||| || ||| |||| |||||| |||||||||    
T  29002638 acaacttttgcaacaactttctctctcgtaatcacattactttttactttatctct 29002693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 38779783 - 38779728
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||| ||||||||| ||| ||||||||||| || ||||||||    
T  38779783 aacttttgcaacaactttttctctcatactcacattattttttacttcatctctct 38779728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 47078278 - 47078235
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  47078278 aactttctctctcatactcacattattttttactttatctctct 47078235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 28249599 - 28249553
Alignment:
Q  250 ataactttctctctcatattcatattatt-ttttattttatctctct 295  Q
    |||||||| ||||||||||||| |||||| |||||||||||||||||    
T  28249599 ataactttttctctcatattcacattattattttattttatctctct 28249553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 32815198 - 32815255
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| |||||||| || ||| ||||||||| ||| ||||||||||| |||||||||||    
T  32815198 acaatttttgcaacaattttttctctcatactcacattattttttactttatctctct 32815255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 37808805 - 37808748
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| |||||||| || ||||||||||||| | | ||||||||||| |||||||||||    
T  37808805 acaatttttgcaacaattttctctctcatacttacattattttttactttatctctct 37808748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 39332015 - 39332072
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| || |||||||||||| ||| ||| |||| |||||| |||||||||||    
T  39332015 acaacttttgtaacaactttctctcttatactcacattactttttactttatctctct 39332072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 44184600 - 44184543
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  44184600 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 44184543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 3343354 - 3343314
Alignment:
Q  255 tttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||||| |||| |||||| |||||||||||    
T  3343354 tttctctctcatattcacattactttttactttatctctct 3343314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 280
Target Start/End: Complemental strand, 18067915 - 18067887
Alignment:
Q  252 aactttctctctcatattcatattatttt 280  Q
    |||||||||||||||||||||||||||||    
T  18067915 aactttctctctcatattcatattatttt 18067887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 31398153 - 31398212
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatatt--attttttattttatctctct 295  Q
    ||||||||||  |||||||||||||||||| ||| |||  |||||||||||| |||||||    
T  31398153 acaacttttgtgataactttctctctcatactcacattacattttttattttctctctct 31398212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 33180734 - 33180694
Alignment:
Q  255 tttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  33180734 tttctctctcatactcacattattttttactttatctctct 33180694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 35588927 - 35588875
Alignment:
Q  243 ttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| ||| | ||| ||||||| ||||||||||| |||||||||||    
T  35588927 ttttgcaataattttttatcttatattcacattattttttactttatctctct 35588875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 42584830 - 42584890
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    ||||||||||||  | |||||||||||||||| ||| ||||| |||||| |||||||||||    
T  42584830 taacaacttttgtgacaactttctctctcatactcacattatatttttactttatctctct 42584890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 8411759 - 8411702
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  8411759 acaacttttgcaacaactttctctctcatactcacattattttttactttatctctct 8411702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 9008255 - 9008312
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  9008255 acaacttttgcaacaactttctctctcatactcacattattttttactttatctctct 9008312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 46172448 - 46172391
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||    
T  46172448 acaacttttgtaataattttctctctcatactcacattattttttattttatctctct 46172391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 3024785 - 3024734
Alignment:
Q  244 tttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  3024785 tttgcaataattttctctctcatactcatattattttttactttatctctct 3024734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 29586021 - 29586080
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||| || ||||||||||||| ||| ||||||||||| |||||||||||    
T  29586021 taacaacttttgcaacaattttctctctcatactcacattattttttactttatctctct 29586080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 756886 - 756943
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||| ||||||| ||| ||||||||||| |||||||||||    
T  756886 acaacttttgcaacaactttctttctcatactcacattattttttactttatctctct 756943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 3603141 - 3603198
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  3603141 acaacttttgcaacaactttctctctcatactcacattactttttagtttatctctct 3603198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 291
Target Start/End: Complemental strand, 4514495 - 4514442
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatct 291  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||| |||||||    
T  4514495 acaacttttgcaacaactttctatctcatattcacattattttttactttatct 4514442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 7128148 - 7128205
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| ||||| |||||||||||||| |||||||| || |||||||||||    
T  7128148 acaacttttgcaacaacttcctctctcatattcacattattttctactttatctctct 7128205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 21486358 - 21486301
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||| ||| ||||||||||||||||||| ||| ||||||||||| |||||||||||    
T  21486358 acaactattgtaataactttctctctcatactcacattattttttactttatctctct 21486301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 33024612 - 33024555
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||  |||||||||||    
T  33024612 acaacttttgcaacaactttctctctcatactcacattatttttttctttatctctct 33024555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 33054129 - 33054072
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  33054129 acaacttttgctacaactttctctctcatactcacattattttttactttatctctct 33054072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 38713614 - 38713655
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctct 293  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  38713614 aactttctctctcatattcatattattttttactttatctct 38713655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 51286408 - 51286351
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||||||||||||||||||||||    
T  51286408 acaacttttgtgacaactttctctctcatactcacattattttttattttatctctct 51286351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 34040539 - 34040484
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||| ||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  34040539 aacttttacaacaactttctctctcatactcacattattttttactttatctctct 34040484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 36577453 - 36577398
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||||||    
T  36577453 acaacttttgcaacaactttctctctcatactcacattactttttactttatctct 36577398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 1790538 - 1790595
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| |||| |||||| |||||| ||||    
T  1790538 acaacttttgcaacaactttctctctcatactcaaattactttttactttatccctct 1790595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 1852992 - 1852935
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| ||||||||||  ||| |||||||    
T  1852992 acaacttttgcaacaactttctctctcatactcacattatttttttctttgtctctct 1852935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 21093387 - 21093342
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||    
T  21093387 ataactttctcattcatattcacattattttttattttatctctct 21093342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 21340552 - 21340609
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||| ||||| ||| |||| |||||| |||||||||||    
T  21340552 acaacttttgcaacaactttctctttcatactcacattactttttactttatctctct 21340609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 35136874 - 35136931
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||| ||||||| ||| |||| |||||| |||||||||||    
T  35136874 acaacttttgcaacaactttctttctcatactcacattactttttactttatctctct 35136931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 46082162 - 46082105
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| ||||||||||| |||| ||| |||| |||||| |||||||||||    
T  46082162 acaacttttgcaacaactttctctcgcatactcacattactttttactttatctctct 46082105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 47214238 - 47214295
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  47214238 acaacttttgtgacaactttctctctcatactcacattattttttactttatctctct 47214295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 47721439 - 47721496
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||| ||||||||||| ||||||||||| |||||||||||    
T  47721439 acaacttttgtgacaactttctgtctcatattcacattattttttactttatctctct 47721496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 47728431 - 47728488
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||| ||||||||||| ||||||||||| |||||||||||    
T  47728431 acaacttttgtgacaactttctgtctcatattcacattattttttactttatctctct 47728488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 52362512 - 52362569
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  52362512 acaacttttgtgacaactttctctctcatactcacattattttttactttatctctct 52362569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 20565162 - 20565102
Alignment:
Q  235 gtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||| |||||||| |||||||||||||||| ||| |||| | |||| |||||||||||    
T  20565162 gtaacaatttttgcaacaactttctctctcatactcacattactctttactttatctctct 20565102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Original strand, 26837479 - 26837539
Alignment:
Q  235 gtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| || ||||||||||||| |||  ||| |||||| |||||||||||    
T  26837479 gtaacaacttttgcaacaattttctctctcatactcacgttactttttactttatctctct 26837539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 38303728 - 38303672
Alignment:
Q  239 caacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||| ||| |||||||||||||||| ||  ||||||||||| |||||||||||    
T  38303728 caacttttacaacaactttctctctcatactcgcattattttttactttatctctct 38303672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 44294045 - 44294101
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctc 294  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||||||| ||||| ||||    
T  44294045 acaatttttgcaataattttctctctcatactcacattattttttactttatttctc 44294101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 49931581 - 49931641
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    ||||||||||||  | |||||||||||||||||||| ||||| |||||| |||||||||||    
T  49931581 taacaacttttgtgacaactttctctctcatattcacattatatttttactttatctctct 49931641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 50824788 - 50824828
Alignment:
Q  255 tttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  50824788 tttctctctcatactcatattattttttactttatctctct 50824828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 36494507 - 36494550
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||||||||||||| | |||||||||||    
T  36494507 aactttctctctcatactcatattatttttcactttatctctct 36494550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 36673758 - 36673715
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| |||| |||||||||| |||||||||||    
T  36673758 aactttctctctcatactcatgttattttttactttatctctct 36673715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 44632572 - 44632615
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  44632572 aactttctctctcatactcacattattttttactttatctctct 44632615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 48220171 - 48220128
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  48220171 aactttctctctcatactcacattattttttactttatctctct 48220128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 236 - 295
Target Start/End: Complemental strand, 49559242 - 49559184
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||  | |||||||||||||||||| | |||| ||||||||||||||||||    
T  49559242 taacaacttttgtgacaactttctctctcatatttacatta-tttttattttatctctct 49559184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 48325997 - 48326055
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatatta-ttttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| | | |||| ||||||| |||||||||||    
T  48325997 acaacttttgcaacaactttctctctcatacttacattatttttttactttatctctct 48326055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 902668 - 902725
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||  || |||||||||||||||| ||| |||| |||||| |||||||||||    
T  902668 acaacttttataacaactttctctctcatactcacattactttttactttatctctct 902725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 10890087 - 10890030
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  10890087 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 10890030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 13489692 - 13489749
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  13489692 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 13489749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 26585920 - 26585863
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||  ||| ||| ||||||||||| |||||| ||||    
T  26585920 acaacttttgcaacaactttctctcctatactcacattattttttactttatcgctct 26585863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 26967240 - 26967296
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||| ||||| |||| ||||||||||||||||||    
T  26967240 acaacttttgtgacaactttctctctcacattcacatta-tttttattttatctctct 26967296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 32915113 - 32915056
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  32915113 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 32915056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 281
Target Start/End: Complemental strand, 42598998 - 42598969
Alignment:
Q  252 aactttctctctcatattcatattattttt 281  Q
    ||||||||||||||||||||||||||||||    
T  42598998 aactttctctctcatattcatattattttt 42598969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 50328182 - 50328125
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||| ||||| |||  ||| |||||| |||||||||||    
T  50328182 acaacttttgcaacaactttctctttcatactcacgttactttttactttatctctct 50328125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 4469457 - 4469413
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctc 294  Q
    |||| |||||||||| || ||||||||||||||| ||||||||||    
T  4469457 ataattttctctctcttactcatattattttttactttatctctc 4469413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 295
Target Start/End: Original strand, 49570024 - 49570084
Alignment:
Q  236 taacaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    ||||||||||||  | |||||||||||||||||||| ||||| |||||| ||| |||||||    
T  49570024 taacaacttttgtgacaactttctctctcatattcacattatatttttactttctctctct 49570084  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 50882134 - 50882094
Alignment:
Q  255 tttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||||| | ||||||||||| |||||||||||    
T  50882134 tttctctctcatatttacattattttttactttatctctct 50882094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 868979 - 868936
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  868979 aactttctctctcatattcatattattttttactttatctctct 868936  T

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Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 4820283 - 4820338
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  4820283 aacttttgcaacaactttctctctcatactcacattattttttactttatctctct 4820338  T

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Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 2075488 - 2075435
Alignment:
Q  242 cttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||    
T  2075488 cttttgcaacaactttctctctcatactcacattattttttactttatctctct 2075435  T

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Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 11547570 - 11547513
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| || ||||||||||||| ||| ||||||||||| |||||||||||    
T  11547570 acaacttttgcaacaattttctctctcatactcacattattttttactttatctctct 11547513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 30036835 - 30036778
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| || |||||||| |||||||||||    
T  30036835 acaacttttgcaacaactttctctctcataatcacataattttttactttatctctct 30036778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 30152571 - 30152514
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||||||||||||| ||| || |||||||| |||||||||||    
T  30152571 acaacttttgcaacaactttctctctcatactcacataattttttactttatctctct 30152514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 754479 - 754422
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||| ||||||||| ||| |||| |||||| |||||||||||    
T  754479 acaacttttgcaacaactttttctctcatactcacattactttttactttatctctct 754422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 13143423 - 13143366
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||| |||||||| |||||||||||||||| ||| |||| |||||| |||||||||||    
T  13143423 acaatttttgcaacaactttctctctcatactcacattactttttactttatctctct 13143366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 35213602 - 35213545
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| || |||||||||||||||| ||| |||| |||||| |||||||||||    
T  35213602 acaacttttgtaacaactttctctctcatactcacattactttttactttatctctct 35213545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 22341218 - 22341158
Alignment:
Q  235 gtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||  ||||| |||||||||||| ||| || |||||||| |||||||||||    
T  22341218 gtaacaacttttgtgataacattctctctcatactcacatcattttttactttatctctct 22341158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 293
Target Start/End: Original strand, 335093 - 335148
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    |||||||||| || || ||||||||||||| ||||||||||||| | |||||||||    
T  335093 acaacttttgtaacaaatttctctctcatactcatattatttttaactttatctct 335148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Complemental strand, 3611000 - 3610945
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||| ||||||||| ||| |||| |||||| |||||||||||    
T  3611000 aacttttgcaacaactttttctctcatactcacattactttttactttatctctct 3610945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 252 - 295
Target Start/End: Complemental strand, 6531210 - 6531167
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||    
T  6531210 aactttctctctcatactcacattattttttactttatctctct 6531167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 15318229 - 15318174
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctct 293  Q
    ||||||||||  | |||||||||||||||||||| |||||| |||| |||||||||    
T  15318229 acaacttttgttacaactttctctctcatattcacattattatttactttatctct 15318174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 34504052 - 34504107
Alignment:
Q  240 aacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| |||||||||||||||| ||| |||| |||| | |||||||||||    
T  34504052 aacttttgcaacaactttctctctcatactcacattacttttcactttatctctct 34504107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 5327633 - 5327575
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattatt-ttttattttatctctct 295  Q
    |||||||||  || |||||||||||||||| |||||||||| ||||| |||||||||||    
T  5327633 acaacttttataacaactttctctctcatactcatattatttttttactttatctctct 5327575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Complemental strand, 14699693 - 14699647
Alignment:
Q  250 ataactttctctctcatattcatattattttttattttatctctctg 296  Q
    |||||||||| ||||||| ||| ||||||||||| ||||||||||||    
T  14699693 ataactttctttctcatactcacattattttttactttatctctctg 14699647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 17551420 - 17551362
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattat-tttttattttatctctct 295  Q
    |||||||||| || |||||||||||||||| ||| ||||| |||||| |||||||||||    
T  17551420 acaacttttgtaacaactttctctctcatactcacattatgtttttactttatctctct 17551362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 32459558 - 32459500
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatatta-ttttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||||||| |||| ||||||| |||||||||||    
T  32459558 acaacttttgtgacaactttctctctcatattcacattacttttttactttatctctct 32459500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 3199004 - 3199045
Alignment:
Q  252 aactttctctctcatattcatattattttttattttatctct 293  Q
    |||||||||||||||| ||| ||||||||| |||||||||||    
T  3199004 aactttctctctcatactcacattatttttcattttatctct 3199045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 8747199 - 8747256
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| |||| || ||||||| |||||||||||    
T  8747199 acaacttttgttacaactttctctctcatactcatttttttttttactttatctctct 8747256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 18141342 - 18141285
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  18141342 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 18141285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 295
Target Start/End: Complemental strand, 20822909 - 20822852
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| |||| |||||| |||||||||||    
T  20822909 acaacttttgtgacaactttctctctcatactcacattactttttactttatctctct 20822852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 32046724 - 32046785
Alignment:
Q  234 tgtaacaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||| ||  | ||| |||||||||||| ||| ||||||||||| |||||||||||    
T  32046724 tgtaacaacttatgtgacaaccttctctctcatactcacattattttttactttatctctct 32046785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 2777360 - 2777312
Alignment:
Q  235 gtaacaacttttgcaataactttctctctcatattcatattatttttta 283  Q
    |||||||||||||||| || ||||||||||||| ||| |||| ||||||    
T  2777360 gtaacaacttttgcaacaattttctctctcatactcacattacttttta 2777312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 252 - 295
Target Start/End: Original strand, 15974651 - 15974695
Alignment:
Q  252 aactttctctctcatattcatattat-tttttattttatctctct 295  Q
    |||||||||||||||||||| ||||| |||||||||| |||||||    
T  15974651 aactttctctctcatattcacattatctttttattttctctctct 15974695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 31869096 - 31869155
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatatt--attttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| |||||||  |||||||||||| |||||||    
T  31869096 acaacttttgtgacaactttctctctcatactcatatttcattttttattttctctctct 31869155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0687 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 2227 - 2284
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||||| |||||| ||||||||| ||| ||||||||||| |||||||||||    
T  2227 acaacttttgcaacaactttatctctcatagtcacattattttttactttatctctct 2284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 10994 - 11051
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    ||||||||||  | |||||||||||||||| ||| ||||||||||| |||||||||||    
T  10994 acaacttttgtgacaactttctctctcatactcacattattttttactttatctctct 11051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 295
Target Start/End: Original strand, 9233 - 9290
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctctct 295  Q
    |||||||||| || |||||||||||| ||| |||||||| |||||| |||||||||||    
T  9233 acaacttttgaaacaactttctctcttatactcatattactttttactttatctctct 9290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 291
Target Start/End: Original strand, 23106 - 23159
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatct 291  Q
    |||| |||||||| || ||||||||||||||||| ||||||||||| |||||||    
T  23106 acaatttttgcaacaattttctctctcatattcacattattttttactttatct 23159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 292
Target Start/End: Original strand, 19666 - 19720
Alignment:
Q  238 acaacttttgcaataactttctctctcatattcatattattttttattttatctc 292  Q
    ||||||||||||| |||||||||||||||| ||| |||| | |||| ||||||||    
T  19666 acaacttttgcaacaactttctctctcatactcacattactctttactttatctc 19720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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