View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11400_low_45 (Length: 283)
Name: NF11400_low_45
Description: NF11400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11400_low_45 |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 14 - 271
Target Start/End: Original strand, 12267818 - 12268075
Alignment:
| Q |
14 |
agggctaagaatgtttggaaatcatttgttcctccttccagttcaatgccatcagatcacacaatgaataaatgacaaagctatagatactcatgctatg |
113 |
Q |
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| T |
12267818 |
agggctaagaatgtttggaaatcatttgttcctccttccagttcaatgccatcagatcacgcaatgaataaatgacaaagctatagatactcatactatg |
12267917 |
T |
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| Q |
114 |
aattaaaatctaataacttgaacccttcccactatagaaattaaagaggccttcaaagttgtcactttggatttgattctatccacaactttctcttcaa |
213 |
Q |
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| T |
12267918 |
aattaaaatctaataacttgaacccttcccactatagaaattaaagatgccttcaaagttgtcaatttggatttgattctatccacaactttctcttcaa |
12268017 |
T |
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| Q |
214 |
caagaagattattgttgtagacactatcattagtttgactctgaatttgatgaaggtt |
271 |
Q |
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| T |
12268018 |
caagaagattattgttgtagacactatcattagtttgactctgaatttgatgaaggtt |
12268075 |
T |
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