View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11400_low_58 (Length: 238)

Name: NF11400_low_58
Description: NF11400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11400_low_58
NF11400_low_58
[»] chr2 (33 HSPs)
chr2 (1-124)||(12268153-12268276)
chr2 (118-183)||(1777462-1777527)
chr2 (116-183)||(25979252-25979319)
chr2 (127-183)||(2412429-2412485)
chr2 (127-183)||(23861754-23861810)
chr2 (127-183)||(25977872-25977928)
chr2 (125-179)||(23863055-23863109)
chr2 (128-183)||(36837779-36837834)
chr2 (127-183)||(11087051-11087107)
chr2 (127-183)||(19604920-19604976)
chr2 (127-183)||(30843646-30843702)
chr2 (117-183)||(8809588-8809655)
chr2 (128-171)||(24754171-24754214)
chr2 (123-180)||(1137979-1138036)
chr2 (127-183)||(20245306-20245363)
chr2 (115-180)||(24358890-24358955)
chr2 (127-183)||(1778791-1778847)
chr2 (127-175)||(25282409-25282457)
chr2 (127-183)||(25283273-25283329)
chr2 (127-173)||(3924877-3924923)
chr2 (125-183)||(21573936-21573994)
chr2 (117-183)||(38980195-38980261)
chr2 (127-180)||(4794132-4794185)
chr2 (126-183)||(8810704-8810761)
chr2 (127-180)||(18113091-18113144)
chr2 (124-157)||(29182410-29182443)
chr2 (127-180)||(33575754-33575807)
chr2 (118-183)||(37271732-37271797)
chr2 (124-180)||(146325-146381)
chr2 (127-183)||(4038844-4038900)
chr2 (127-183)||(11088681-11088737)
chr2 (117-161)||(12068368-12068412)
chr2 (127-183)||(30844549-30844605)
[»] chr3 (48 HSPs)
chr3 (115-183)||(52401007-52401075)
chr3 (127-183)||(4705683-4705739)
chr3 (127-183)||(20489359-20489415)
chr3 (127-183)||(45267307-45267363)
chr3 (127-183)||(48035733-48035789)
chr3 (127-183)||(52403125-52403181)
chr3 (124-183)||(20488365-20488424)
chr3 (127-180)||(20585648-20585701)
chr3 (127-183)||(39820605-39820661)
chr3 (127-183)||(45268571-45268627)
chr3 (127-183)||(53121304-53121360)
chr3 (127-176)||(42446528-42446577)
chr3 (127-179)||(46026078-46026130)
chr3 (127-183)||(48033060-48033116)
chr3 (127-183)||(52708618-52708674)
chr3 (127-178)||(38505585-38505636)
chr3 (117-179)||(9855170-9855232)
chr3 (121-179)||(40477379-40477437)
chr3 (130-183)||(977847-977900)
chr3 (127-176)||(40476223-40476272)
chr3 (127-183)||(3416497-3416553)
chr3 (127-183)||(42447788-42447844)
chr3 (127-183)||(46104345-46104401)
chr3 (127-183)||(47433810-47433866)
chr3 (127-179)||(54437472-54437524)
chr3 (128-183)||(22508738-22508793)
chr3 (128-171)||(42444040-42444083)
chr3 (121-183)||(39819308-39819370)
chr3 (117-179)||(41780813-41780875)
chr3 (127-183)||(976782-976838)
chr3 (127-183)||(32635596-32635652)
chr3 (127-183)||(32637189-32637245)
chr3 (127-183)||(43641145-43641201)
chr3 (127-183)||(46027418-46027474)
chr3 (118-178)||(51004135-51004195)
chr3 (128-180)||(52707539-52707591)
chr3 (135-181)||(20644575-20644621)
chr3 (122-180)||(43441548-43441606)
chr3 (118-163)||(3417813-3417858)
chr3 (135-180)||(8555193-8555238)
chr3 (128-180)||(3387268-3387320)
chr3 (127-179)||(9603631-9603683)
chr3 (116-180)||(12741216-12741280)
chr3 (127-171)||(15782217-15782261)
chr3 (127-183)||(39288840-39288896)
chr3 (127-175)||(44507808-44507856)
chr3 (121-157)||(44802516-44802552)
chr3 (151-183)||(46106765-46106797)
[»] chr7 (44 HSPs)
chr7 (116-183)||(41693636-41693703)
chr7 (127-183)||(35212070-35212126)
chr7 (121-183)||(24195603-24195665)
chr7 (127-183)||(17066427-17066483)
chr7 (127-183)||(41694956-41695012)
chr7 (121-183)||(42254954-42255016)
chr7 (127-183)||(13418952-13419008)
chr7 (127-183)||(31848145-31848201)
chr7 (128-183)||(12385708-12385763)
chr7 (128-183)||(38742184-38742239)
chr7 (127-177)||(31489942-31489992)
chr7 (127-179)||(5611512-5611564)
chr7 (115-183)||(28462629-28462697)
chr7 (127-179)||(31853550-31853602)
chr7 (127-183)||(32197910-32197966)
chr7 (127-175)||(39619800-39619848)
chr7 (128-183)||(11217072-11217127)
chr7 (128-183)||(32544775-32544830)
chr7 (127-178)||(36748200-36748250)
chr7 (128-175)||(43066004-43066051)
chr7 (117-179)||(36749252-36749314)
chr7 (127-180)||(32196686-32196739)
chr7 (130-183)||(39618661-39618713)
chr7 (122-178)||(554242-554298)
chr7 (127-183)||(12933421-12933477)
chr7 (127-183)||(24197104-24197160)
chr7 (127-183)||(25046241-25046297)
chr7 (127-183)||(40576768-40576824)
chr7 (139-183)||(42255903-42255947)
chr7 (131-183)||(43869913-43869965)
chr7 (128-183)||(5610159-5610214)
chr7 (117-180)||(25988694-25988757)
chr7 (122-157)||(28263039-28263074)
chr7 (121-180)||(44568635-44568694)
chr7 (107-157)||(8555767-8555817)
chr7 (119-180)||(1614849-1614910)
chr7 (114-179)||(11766906-11766971)
chr7 (130-183)||(25037755-25037808)
chr7 (116-180)||(3975540-3975604)
chr7 (116-180)||(23399921-23399985)
chr7 (116-180)||(23676397-23676461)
chr7 (116-180)||(27458390-27458454)
chr7 (121-157)||(34878093-34878129)
chr7 (116-180)||(35104069-35104133)
[»] chr1 (50 HSPs)
chr1 (127-183)||(46075051-46075107)
chr1 (127-179)||(24609921-24609973)
chr1 (122-183)||(9774889-9774950)
chr1 (119-183)||(11710547-11710611)
chr1 (127-183)||(27262910-27262966)
chr1 (127-183)||(27264217-27264273)
chr1 (127-183)||(39163025-39163081)
chr1 (121-183)||(47038862-47038924)
chr1 (127-180)||(48588965-48589018)
chr1 (127-180)||(48594052-48594105)
chr1 (127-180)||(48598663-48598716)
chr1 (127-183)||(23469970-23470026)
chr1 (127-183)||(24611118-24611174)
chr1 (127-183)||(35721103-35721159)
chr1 (127-183)||(37395635-37395691)
chr1 (127-183)||(50164405-50164461)
chr1 (128-183)||(9774040-9774095)
chr1 (120-183)||(20723689-20723752)
chr1 (127-183)||(11711255-11711310)
chr1 (127-183)||(13074575-13074631)
chr1 (127-183)||(20722474-20722530)
chr1 (127-183)||(24427370-24427426)
chr1 (127-183)||(26863862-26863918)
chr1 (127-183)||(46073887-46073943)
chr1 (127-173)||(2604138-2604184)
chr1 (130-183)||(17976766-17976819)
chr1 (130-183)||(17977560-17977613)
chr1 (130-183)||(27816721-27816774)
chr1 (117-157)||(25658269-25658309)
chr1 (127-183)||(34934748-34934804)
chr1 (127-183)||(35722286-35722342)
chr1 (127-183)||(35911889-35911945)
chr1 (127-183)||(37396841-37396897)
chr1 (117-180)||(33000614-33000677)
chr1 (116-183)||(45290448-45290515)
chr1 (127-174)||(45979506-45979553)
chr1 (125-180)||(51240119-51240174)
chr1 (122-180)||(10631473-10631531)
chr1 (130-180)||(28198435-28198485)
chr1 (127-173)||(48856214-48856260)
chr1 (135-180)||(12360673-12360718)
chr1 (120-157)||(17130051-17130088)
chr1 (127-180)||(24507481-24507534)
chr1 (130-183)||(27815446-27815499)
chr1 (127-183)||(39162825-39162882)
chr1 (124-180)||(4789307-4789363)
chr1 (116-180)||(15526307-15526371)
chr1 (127-183)||(19622959-19623015)
chr1 (116-180)||(26207269-26207333)
chr1 (117-157)||(52254175-52254215)
[»] chr6 (28 HSPs)
chr6 (122-180)||(17516159-17516217)
chr6 (127-183)||(17517310-17517366)
chr6 (127-183)||(34998142-34998198)
chr6 (127-180)||(29291361-29291414)
chr6 (128-180)||(1171655-1171707)
chr6 (127-183)||(18810534-18810590)
chr6 (127-183)||(21165248-21165304)
chr6 (128-183)||(3279500-3279555)
chr6 (127-180)||(1974156-1974209)
chr6 (122-183)||(16995448-16995509)
chr6 (122-183)||(25440674-25440735)
chr6 (127-183)||(20393269-20393325)
chr6 (120-172)||(20895953-20896005)
chr6 (127-183)||(20897498-20897554)
chr6 (127-183)||(21953208-21953264)
chr6 (116-176)||(30253547-30253607)
chr6 (127-183)||(34995116-34995172)
chr6 (127-183)||(1972402-1972458)
chr6 (127-179)||(3276369-3276421)
chr6 (124-180)||(13617528-13617584)
chr6 (128-179)||(20391217-20391268)
chr6 (127-180)||(17000281-17000334)
chr6 (116-157)||(19320758-19320799)
chr6 (127-180)||(31198617-31198670)
chr6 (127-183)||(8680777-8680833)
chr6 (127-183)||(12419880-12419936)
chr6 (125-173)||(25439648-25439696)
chr6 (127-183)||(32885675-32885731)
[»] chr5 (25 HSPs)
chr5 (121-183)||(3936574-3936636)
chr5 (124-183)||(3205103-3205162)
chr5 (122-183)||(27571130-27571191)
chr5 (127-183)||(4565395-4565451)
chr5 (127-183)||(6894011-6894067)
chr5 (124-179)||(15604063-15604117)
chr5 (127-184)||(14809165-14809222)
chr5 (127-183)||(3954054-3954110)
chr5 (127-183)||(31540498-31540554)
chr5 (127-183)||(31541623-31541679)
chr5 (127-178)||(15599767-15599818)
chr5 (122-179)||(34911833-34911890)
chr5 (127-183)||(3938061-3938117)
chr5 (127-175)||(27097314-27097362)
chr5 (127-178)||(27570058-27570109)
chr5 (122-180)||(6912802-6912860)
chr5 (127-165)||(25252643-25252681)
chr5 (117-183)||(25254132-25254198)
chr5 (127-165)||(25316428-25316466)
chr5 (117-183)||(25317922-25317988)
chr5 (118-180)||(40764725-40764787)
chr5 (115-180)||(19565457-19565522)
chr5 (127-176)||(34910595-34910643)
chr5 (128-180)||(26071561-26071613)
chr5 (127-183)||(29875402-29875458)
[»] chr8 (37 HSPs)
chr8 (122-183)||(22534723-22534784)
chr8 (116-183)||(10718449-10718516)
chr8 (124-180)||(3483632-3483688)
chr8 (127-183)||(10717123-10717179)
chr8 (127-179)||(14197827-14197879)
chr8 (127-179)||(28997998-28998050)
chr8 (122-183)||(36588219-36588280)
chr8 (127-183)||(28996836-28996892)
chr8 (127-182)||(45517962-45518017)
chr8 (127-180)||(1420446-1420499)
chr8 (122-183)||(22533314-22533375)
chr8 (127-180)||(39440426-39440479)
chr8 (127-183)||(4182624-4182680)
chr8 (127-183)||(22270945-22271001)
chr8 (127-183)||(22272271-22272327)
chr8 (127-183)||(39439926-39439982)
chr8 (117-180)||(10872907-10872970)
chr8 (127-180)||(3680746-3680799)
chr8 (122-183)||(45516394-45516455)
chr8 (127-183)||(3031544-3031600)
chr8 (127-183)||(4183980-4184036)
chr8 (115-179)||(27117922-27117986)
chr8 (127-183)||(30124224-30124280)
chr8 (127-183)||(38456731-38456787)
chr8 (127-183)||(38658483-38658539)
chr8 (121-180)||(20984142-20984201)
chr8 (128-175)||(41357375-41357422)
chr8 (125-179)||(38455447-38455501)
chr8 (130-183)||(1376940-1376993)
chr8 (130-183)||(1385556-1385609)
chr8 (127-180)||(4473989-4474042)
chr8 (115-180)||(28346384-28346449)
chr8 (122-183)||(36589388-36589449)
chr8 (127-183)||(1526114-1526170)
chr8 (116-180)||(11019511-11019575)
chr8 (116-180)||(11976364-11976428)
chr8 (117-157)||(44997923-44997963)
[»] chr4 (43 HSPs)
chr4 (127-183)||(33137229-33137285)
chr4 (127-183)||(3879088-3879144)
chr4 (127-183)||(22204057-22204113)
chr4 (127-183)||(42359347-42359403)
chr4 (127-183)||(54121701-54121757)
chr4 (127-179)||(3880501-3880553)
chr4 (119-183)||(29060883-29060947)
chr4 (127-179)||(32699319-32699371)
chr4 (127-179)||(33134893-33134945)
chr4 (127-183)||(45618287-45618343)
chr4 (128-183)||(17371846-17371901)
chr4 (118-180)||(34659699-34659761)
chr4 (123-176)||(41935078-41935131)
chr4 (122-183)||(55542580-55542641)
chr4 (127-183)||(19674416-19674472)
chr4 (127-175)||(38166497-38166545)
chr4 (115-183)||(42358022-42358090)
chr4 (127-183)||(45619732-45619788)
chr4 (144-183)||(40198593-40198632)
chr4 (121-183)||(16573374-16573436)
chr4 (127-177)||(41933820-41933870)
chr4 (127-164)||(5259171-5259208)
chr4 (127-180)||(19675624-19675677)
chr4 (124-176)||(16916066-16916118)
chr4 (117-180)||(26412182-26412245)
chr4 (127-181)||(4211563-4211617)
chr4 (127-180)||(12152438-12152491)
chr4 (127-180)||(14487804-14487857)
chr4 (119-180)||(14791751-14791812)
chr4 (122-183)||(17281568-17281629)
chr4 (122-183)||(17370070-17370131)
chr4 (127-180)||(23245540-23245593)
chr4 (127-180)||(26412529-26412582)
chr4 (119-180)||(30046737-30046798)
chr4 (119-180)||(30061078-30061139)
chr4 (127-172)||(32698001-32698046)
chr4 (119-180)||(43231334-43231395)
chr4 (127-180)||(46292394-46292447)
chr4 (117-157)||(2322400-2322440)
chr4 (116-180)||(24774036-24774100)
chr4 (128-176)||(35054665-35054713)
chr4 (127-175)||(44705301-44705349)
chr4 (123-183)||(47359512-47359572)
[»] scaffold0002 (4 HSPs)
scaffold0002 (130-183)||(344942-344995)
scaffold0002 (127-179)||(374337-374389)
scaffold0002 (127-179)||(345902-345954)
scaffold0002 (127-172)||(376381-376426)
[»] scaffold0562 (1 HSPs)
scaffold0562 (127-183)||(9924-9980)
[»] scaffold0517 (2 HSPs)
scaffold0517 (127-183)||(11523-11579)
scaffold0517 (127-183)||(10317-10373)
[»] scaffold0230 (1 HSPs)
scaffold0230 (127-183)||(432-488)
[»] scaffold0106 (2 HSPs)
scaffold0106 (127-183)||(30908-30964)
scaffold0106 (127-183)||(29731-29787)
[»] scaffold0001 (2 HSPs)
scaffold0001 (127-183)||(120986-121042)
scaffold0001 (127-183)||(119595-119651)
[»] scaffold0095 (1 HSPs)
scaffold0095 (127-180)||(42759-42812)
[»] scaffold0516 (1 HSPs)
scaffold0516 (127-179)||(1140-1192)
[»] scaffold0009 (1 HSPs)
scaffold0009 (127-183)||(202581-202637)
[»] scaffold0765 (1 HSPs)
scaffold0765 (128-179)||(1863-1914)
[»] scaffold0176 (1 HSPs)
scaffold0176 (115-157)||(21686-21728)
[»] scaffold0005 (1 HSPs)
scaffold0005 (119-180)||(47919-47980)
[»] scaffold0326 (2 HSPs)
scaffold0326 (115-183)||(4230-4298)
scaffold0326 (115-183)||(19412-19480)


Alignment Details
Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 12268153 - 12268276
Alignment:
Q  1 atttgatgttttgactaagcacaaacatggggcacctagtgtaaacctcattccaagttttgtttaatgatattgatacattcaagatgagaataccaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12268153 atttgatgttttgactaagcacaaacatggggcacctagtgtaaacctcattccaagttttgtttaatgatattgatacattcaagatgagaataccaca 12268252  T
Q  101 cttacgatgacattttaaaataaa 124  Q
    ||||| ||||||||||||||||||    
T  12268253 cttacaatgacattttaaaataaa 12268276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 1777462 - 1777527
Alignment:
Q  118 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  1777462 aaataaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctggta 1777527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 25979319 - 25979252
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||| ||| |||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  25979319 taaaattaaggctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccctggta 25979252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 2412485 - 2412429
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  2412485 ctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggta 2412429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 23861754 - 23861810
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||    
T  23861754 ctaaaatatgtttttggtccctgcaaatatggagagtttggattttggtccctggta 23861810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 25977872 - 25977928
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||    
T  25977872 ctaaaatatgtttttggtccctgcaaatatagtgagtttgggttttggtccctggta 25977928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 179
Target Start/End: Complemental strand, 23863109 - 23863055
Alignment:
Q  125 gactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| |||||    
T  23863109 gactaaaatatgtttttggtctctgcaaatatggcgagtttgggttttgatccct 23863055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 36837834 - 36837779
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||| |||||| || |||||||||| ||||||||||||||||||||||||||    
T  36837834 taaaatatatttttggtctctgcaaatatagcgagtttgggttttggtccctggta 36837779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 11087051 - 11087107
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||| |||||||||||||| |||||||||| ||||||||| |||||    
T  11087051 ctaaaatatgattttaatccctgcaaatatagcgagtttggcttttggtccttggta 11087107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 19604976 - 19604920
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| |||||| |||||||||   |||||||||||||||||||||    
T  19604976 ctaaaatatgtttttggtccctgtaaatatggctcatttgggttttggtccctggta 19604920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 30843646 - 30843702
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||| ||| ||||||||||  |||||||||||||||||||||||||    
T  30843646 ctaaaatatgcttttaatcactgcaaatataacgagtttgggttttggtccctggta 30843702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 8809588 - 8809655
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccct-gcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| |||| |||||||||||||||| ||||| ||||||||  ||| |||||||||||||||||||||    
T  8809588 aaaaaaaaggctaaaatatgtttttggtcccttgcaaatataacgaatttgggttttggtccctggta 8809655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Complemental strand, 24754214 - 24754171
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttt 171  Q
    ||||||||||||||| |||||||||||||||||| |||||||||    
T  24754214 taaaatatgtttttggtccctgcaaatatggcgaatttgggttt 24754171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 180
Target Start/End: Original strand, 1137979 - 1138036
Alignment:
Q  123 aagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||| ||||| |||||||||||||| |  |||| ||||||||||||||    
T  1137979 aagactaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctg 1138036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 20245363 - 20245306
Alignment:
Q  127 ctaaaatatg-tttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||||||| ||||||||||| |||| |||||||||| ||||||||||    
T  20245363 ctaaaatatggtttttgattcctgcaaatatagcgaatttgggttttagtccctggta 20245306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 180
Target Start/End: Complemental strand, 24358955 - 24358890
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| ||| |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  24358955 ttaaaatgaaggctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 24358890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 1778847 - 1778791
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| | ||||||||||| |||| ||||||||||||||| |||||    
T  1778847 ctaaaatatgcttttggttcctgcaaatatagcgactttgggttttggtccttggta 1778791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 25282409 - 25282457
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 175  Q
    |||||||||||||||| |||||| ||||||| |||||||| ||||||||    
T  25282409 ctaaaatatgtttttggtccctgtaaatatgtcgagtttgagttttggt 25282457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 25283329 - 25283273
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| || |||||||||| |||| |||| |||||| |||||||||    
T  25283329 ctaaaatatgtttttggtcactgcaaatatagcgaatttgagttttgatccctggta 25283273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 3924923 - 3924877
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttg 173  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||||    
T  3924923 ctaaaatatgcttttgctccttgcaaatatggcgagtttggattttg 3924877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 21573936 - 21573994
Alignment:
Q  125 gactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||| ||||| |||||||||||||| | ||||||  ||||||||| |||||    
T  21573936 gactaaaatatgcttttggtccctgcaaatatgacaagtttgatttttggtccttggta 21573994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 38980261 - 38980195
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||| |||||||||| ||||  |||||||||||||| |  |||| |||||| ||||||||||    
T  38980261 aaaataaaggctaaaatatggttttagtccctgcaaatatgcctcgttttggttttagtccctggta 38980195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 4794132 - 4794185
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  4794132 ctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 4794185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 8810761 - 8810704
Alignment:
Q  126 actaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||||| || |||||||||| |||| ||||| ||||  |||||||||    
T  8810761 actaaaatatgtttttggtctctgcaaatatagcgaatttggattttaatccctggta 8810704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 18113091 - 18113144
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| |||||||||||||| | ||||| |||||| |||||||    
T  18113091 ctaaaatatggttttggtccctgcaaatatgcctagttttggttttagtccctg 18113144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 157
Target Start/End: Complemental strand, 29182443 - 29182410
Alignment:
Q  124 agactaaaatatgtttttgatccctgcaaatatg 157  Q
    ||||||||||||| ||||||||||||||||||||    
T  29182443 agactaaaatatgattttgatccctgcaaatatg 29182410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 33575754 - 33575807
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  33575754 ctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 33575807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 183
Target Start/End: Original strand, 37271732 - 37271797
Alignment:
Q  118 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||| |||||||||| ||||  |||||||||||||| |  |||| |||||| ||||||||||    
T  37271732 aaataaaggctaaaatatggttttagtccctgcaaatatgcctcgttttggttttagtccctggta 37271797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 146325 - 146381
Alignment:
Q  124 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  146325 agactaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 146381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 4038844 - 4038900
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||||||||||| |||||| |  ||||||| ||||||| |||||||    
T  4038844 ctaaaatatgattttgatccctgtaaatatagtaagtttggattttggtacctggta 4038900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 11088737 - 11088681
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||  ||| ||||||||| |||| |||| |||||||| |||||||    
T  11088737 ctaaaatatgtttttcgtccatgcaaatatagcgaatttgagttttggttcctggta 11088681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 12068412 - 12068368
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcga 161  Q
    |||||| || |||||||||| ||||||||||||||||||| ||||    
T  12068412 aaaatataggctaaaatatgcttttgatccctgcaaatatagcga 12068368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 30844605 - 30844549
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||| |||||||||  |||||| |||||| |||| ||||||    
T  30844605 ctaaaatatgtttttggtccttgcaaatataacgagttcgggtttcggtctctggta 30844549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 6e-24; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 52401007 - 52401075
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  52401007 ttaaaattaaggctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccctggta 52401075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 4705683 - 4705739
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  4705683 ctaaaatatgcttttgatccctgcaaatatggcgagtttaggttttggtccctggta 4705739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 20489415 - 20489359
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  20489415 ctaaaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggta 20489359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 45267307 - 45267363
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  45267307 ctaaaatatgtttttgatccctgcaaatatagcgagtttgagttttggtccctggta 45267363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 48035789 - 48035733
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  48035789 ctaaaatatgtttttgatccctgcaaatatgacgagtttggattttggtccctggta 48035733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 52403181 - 52403125
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  52403181 ctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtccctggta 52403125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 20488365 - 20488424
Alignment:
Q  124 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  20488365 agactaaaatatgtttttggtccctgcaaatatggtgaatttgggttttggtccctggta 20488424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 20585701 - 20585648
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  20585701 ctaaaatatgtttttgatccctgcaaatatagcgagtttggattttggtccctg 20585648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 39820661 - 39820605
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  39820661 ctaaaatatggttttggtccctgcaaatatagcgagtttgggttttggtccctggta 39820605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 45268627 - 45268571
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||| |||||||||||||| || |||||||||||||||||||||||    
T  45268627 ctaaaatatgtttttaatccctgcaaatatagcaagtttgggttttggtccctggta 45268571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 53121304 - 53121360
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  53121304 ctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggta 53121360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 42446528 - 42446577
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 176  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  42446528 ctaaaatatgcttttggtccctgcaaatatggcgagtttgggttttggtc 42446577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 46026078 - 46026130
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  46026078 ctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtccct 46026130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 48033060 - 48033116
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||    
T  48033060 ctaaaatatgtttttggtccttgcaaatatggtgagtttggattttggtccctggta 48033116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 52708674 - 52708618
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  52708674 ctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtctctggta 52708618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 178
Target Start/End: Complemental strand, 38505636 - 38505585
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 178  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||||    
T  38505636 ctaaaatatgcttttgctccctgcaaatatggcgagtttgagttttggtccc 38505585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 9855170 - 9855232
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    ||||||| | |||||||||| |||||||||||| |||||| |||||||||| |||||||||||    
T  9855170 aaaataatggctaaaatatgattttgatccctgtaaatatagcgagtttggattttggtccct 9855232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 40477437 - 40477379
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    ||||| |||||||||| ||||| |||||||||||||  |||||||||||||||||||||    
T  40477437 taaaggctaaaatatgattttggtccctgcaaatataacgagtttgggttttggtccct 40477379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 977900 - 977847
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||| |||||||||||||| ||||||||||||||||||| |||||    
T  977900 aaatatgcttttggtccctgcaaatatgacgagtttgggttttggtccttggta 977847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 40476223 - 40476272
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 176  Q
    |||||||||||||||| ||||||||||||| |||||||||| ||||||||    
T  40476223 ctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtc 40476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 3416497 - 3416553
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||||||||||| |||||| || ||||||| |||||||||||||||    
T  3416497 ctaaaatatgattttgatccctgtaaatatagcaagtttggtttttggtccctggta 3416553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 42447844 - 42447788
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||||| |||||||||| ||  |||||||||||||||||||||||    
T  42447844 ctaaaatatgcttttgattcctgcaaatacggttagtttgggttttggtccctggta 42447788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 46104345 - 46104401
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| ||||||||| ||||| ||||||||||    
T  46104345 ctaaaatatgattttggtccctgcaaatatagcgagtttgagtttttgtccctggta 46104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 47433866 - 47433810
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  47433866 ctaaaatatggttttggtccctgcaaatatagcgaatttgagttttggtccctggta 47433810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 54437524 - 54437472
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| ||||||||||||| |||| |||| ||||||||||||    
T  54437524 ctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttggtccct 54437472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 22508738 - 22508793
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||| ||||| ||||||||||||| ||||||||| |||||||||| |||||    
T  22508738 taaaatatgattttggtccctgcaaatatagcgagtttgagttttggtccttggta 22508793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 42444040 - 42444083
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttt 171  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  42444040 taaaatatgtttttggtccctgcaaatatggcaagtttgggttt 42444083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 39819308 - 39819370
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||| |||||||||| ||||  ||||||||||||| |||||||||  |||||||||||||||    
T  39819308 taaagcctaaaatatggttttagtccctgcaaatatagcgagtttgaattttggtccctggta 39819370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 41780875 - 41780813
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||| |||| ||||||||||||||||||||||  |||||| || ||||||||||| |||||||    
T  41780875 aaaaaaaaggctaaaatatgtttttgatccctaaaaatatagcaagtttgggtttcggtccct 41780813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 976782 - 976838
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||||||||||||||||| |||| |||  ||||| ||||||||||    
T  976782 ctaaaatatgcttttgatccctgcaaatatagcgaatttaagttttagtccctggta 976838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 32635596 - 32635652
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||| |||||  ||| || |||||| ||||||||||||||||||||||||||    
T  32635596 ctaaaatatattttttgtccttgtaaatatagcgagtttgggttttggtccctggta 32635652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 32637245 - 32637189
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| |||||| |||| | |||||||||||||||||| |||||||    
T  32637245 ctaaaatatgcttttggtccctgtaaatgtagcgagtttgggttttggttcctggta 32637189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 43641145 - 43641201
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||  ||||||||||||| |||||||||| || ||||||||||||    
T  43641145 ctaaaatatgcttttagtccctgcaaatatagcgagtttggattatggtccctggta 43641201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 46027474 - 46027418
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||  ||||| ||||||||||||| |||||||||  |||||||||||||||    
T  46027474 ctaaaatatacttttggtccctgcaaatatagcgagtttgaattttggtccctggta 46027418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 178
Target Start/End: Original strand, 51004135 - 51004195
Alignment:
Q  118 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 178  Q
    ||||| || |||||||||||||||   ||||| ||||||||||| ||||||||||||||||    
T  51004135 aaatataggctaaaatatgtttttagaccctgtaaatatggcgaatttgggttttggtccc 51004195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 52707539 - 52707591
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||||||||| ||| ||||||||| |||| |||| |||||||||||||    
T  52707539 taaaatatgtttttggtccttgcaaatatagcgaatttgagttttggtccctg 52707591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 181
Target Start/End: Original strand, 20644575 - 20644621
Alignment:
Q  135 tgtttttgatccctgcaaatatggcgagtttgggttttggtccctgg 181  Q
    ||||||||||||||||||||||| |  |||| |||||||||||||||    
T  20644575 tgtttttgatccctgcaaatatgtctcgttttggttttggtccctgg 20644621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 43441606 - 43441548
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||| |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  43441606 aaaggctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 43441548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 3417858 - 3417813
Alignment:
Q  118 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagt 163  Q
    |||| ||| |||||||||||||||| |||||| |||||||||||||    
T  3417858 aaatcaaggctaaaatatgtttttggtccctgtaaatatggcgagt 3417813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 8555238 - 8555193
Alignment:
Q  135 tgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||||||||||||||||| |  |||| ||||||||||||||    
T  8555238 tgtttttgatccctgcaaatatgtcttgttttggttttggtccctg 8555193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 3387268 - 3387320
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  3387268 taaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 3387320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 9603631 - 9603683
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| ||||||    
T  9603631 ctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccct 9603683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 12741280 - 12741216
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||| |||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  12741280 taaaaaaaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 12741216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 171
Target Start/End: Original strand, 15782217 - 15782261
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttt 171  Q
    ||||||||| |||||| ||||||||||||| ||||||||| ||||    
T  15782217 ctaaaatatatttttggtccctgcaaatatagcgagtttgagttt 15782261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 39288896 - 39288840
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||| ||||||||||||||| |  |||| |||||| ||||||||||    
T  39288896 ctaaaatatggttttaatccctgcaaatatgcctcgttttggttttagtccctggta 39288840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 44507856 - 44507808
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 175  Q
    |||||||||| ||||| ||||||||||||| |||||||||  |||||||    
T  44507856 ctaaaatatgattttggtccctgcaaatatagcgagtttgaattttggt 44507808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 44802552 - 44802516
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  44802552 taaaggctaaaatatgattttgatccctgcaaatatg 44802516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 183
Target Start/End: Complemental strand, 46106797 - 46106765
Alignment:
Q  151 aaatatggcgagtttgggttttggtccctggta 183  Q
    |||||| ||||||||||||||||||||||||||    
T  46106797 aaatatagcgagtttgggttttggtccctggta 46106765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 41693636 - 41693703
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41693636 taaattaaaggctaaaatatgtttttgatccctgcaaatatggcgaatttgggttttggtccctggta 41693703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 35212070 - 35212126
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  35212070 ctaaaatatgtttttggtccctgcaaatatgacgagtttgggttttggtccctggta 35212126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 24195603 - 24195665
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||| |||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||    
T  24195603 taaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttgctccctggta 24195665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 17066427 - 17066483
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  17066427 ctaaaatatgcttttaatccctgcaaatatagcgagtttgggttttggtccctggta 17066483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 41695012 - 41694956
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  41695012 ctaaaatatgtttttcatccctgcaaatatagcgagtttgagttttggtccctggta 41694956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 42254954 - 42255016
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||| |||||||||| ||||| |||||| |||||||||||||||| ||||||||||||||||    
T  42254954 taaaggctaaaatatgcttttggtccctgtaaatatggcgagtttgagttttggtccctggta 42255016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 13418952 - 13419008
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| |||| ||||||| |||||||||||||    
T  13418952 ctaaaatatgtttttggtccctgcaaatattgcgaatttgggtattggtccctggta 13419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 31848201 - 31848145
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||  ||||||||||||| |||| |||||||||||||||||||||    
T  31848201 ctaaaatatgtttttagtccctgcaaatatagcgaatttgggttttggtccctggta 31848145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 12385763 - 12385708
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||||    
T  12385763 taaaatatgattttggtccctgcaaatatagcgagtttggattttggtccctggta 12385708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 38742184 - 38742239
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||  ||||||||||||| ||||||||||||||||||||| ||||    
T  38742184 taaaatatgtttttagtccctgcaaatatagcgagtttgggttttggtccccggta 38742239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 31489992 - 31489942
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtcc 177  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||||||    
T  31489992 ctaaaatatgtttttggtccctgcaaatataacgagtttgggttttggtcc 31489942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 5611564 - 5611512
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  5611564 ctaaaatatgattttggtccctgcaaatatagcgagtttgggttttcgtccct 5611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 28462697 - 28462629
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||| ||| ||||||||||| ||||| || ||||||||||| ||| ||||||||||| |||||||||    
T  28462697 ttaaaaaaaatactaaaatatgcttttggtctctgcaaatatgacgaatttgggttttgatccctggta 28462629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 31853550 - 31853602
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| ||||||||||||| | |||||||| |||||||||||    
T  31853550 ctaaaatatgtttttggtccctgcaaatattgtgagtttggattttggtccct 31853602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 32197966 - 32197910
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  32197966 ctaaaatatgcttttggtccctgcaaatatagcgaatttgggttttggtccttggta 32197910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 39619848 - 39619800
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 175  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  39619848 ctaaaatatgcttttggtccatgcaaatatggcgagtttgggttttggt 39619800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 11217127 - 11217072
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||| ||||| ||||||||||||| |||||||||  |||||||||||||||    
T  11217127 taaaatatgcttttggtccctgcaaatatagcgagtttgaattttggtccctggta 11217072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 32544830 - 32544775
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||| ||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  32544830 taaaatatgattttggtccctgcaaatatagcgaatttgggttttggtccttggta 32544775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 36748200 - 36748250
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 178  Q
    |||||||||||||||| ||||||||||||| | |||||||||||||||||||    
T  36748200 ctaaaatatgtttttggtccctgcaaatat-gagagtttgggttttggtccc 36748250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 43066004 - 43066051
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 175  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  43066004 taaaatatgttttttatccctgcaaatatagcgagtttgagttttggt 43066051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 36749314 - 36749252
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||| |||| |||||||||||||||| ||  |||||||||| |||||||| ||||||||||||    
T  36749314 aaaaaaaaggctaaaatatgtttttggtcattgcaaatatgacgagtttgagttttggtccct 36749252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 32196686 - 32196739
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||||| ||||||||||||| |||  ||||| ||||||||||||    
T  32196686 ctaaaatatgtttttggtccctgcaaatatagcgtatttggattttggtccctg 32196739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 39618661 - 39618713
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||| ||  |||||| |||||||||||||||||||||||||||||    
T  39618661 aaatatgtttttg-tctatgcaaaaatggcgagtttgggttttggtccctggta 39618713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 554242 - 554298
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 178  Q
    |||| |||||||||  | ||| ||||||||||||| |||||||||||||||||||||    
T  554242 aaaggctaaaatataatattggtccctgcaaatatagcgagtttgggttttggtccc 554298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 12933421 - 12933477
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| | |||||||  |||||||||||||||    
T  12933421 ctaaaatatgcttttggtccctgcaaatatagtgagtttgaattttggtccctggta 12933477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 24197160 - 24197104
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| |||| |||| |||||||| |||||||    
T  24197160 ctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggttcctggta 24197104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 25046297 - 25046241
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||| |||||||||||||||||| | ||||||||| |||||    
T  25046297 ctaaaatatgattttggtccttgcaaatatggcgagtttagattttggtccatggta 25046241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 40576768 - 40576824
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| |||||||||||||| ||| ||||| |||||||| ||||||    
T  40576768 ctaaaatatgcttttggtccctgcaaatatgacgaatttggattttggtctctggta 40576824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 42255947 - 42255903
Alignment:
Q  139 tttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||    
T  42255947 tttggtccctgcaaatatgacgagtttgagttttggtccctggta 42255903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 43869965 - 43869913
Alignment:
Q  131 aatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||| ||||| ||||||||||||| || | |||||||||||||||||||||    
T  43869965 aatatggttttggtccctgcaaatatagccaatttgggttttggtccctggta 43869913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 5610159 - 5610214
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||| |||||||||||||||||||  ||| |||||||||| ||| ||||||    
T  5610159 taaaatatgcttttgatccctgcaaatataacgaatttgggttttagtctctggta 5610214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 25988757 - 25988694
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  25988757 aaaataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 25988694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 157
Target Start/End: Complemental strand, 28263074 - 28263039
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    ||||||||||||||| ||||||||||||||||||||    
T  28263074 aaagactaaaatatggttttgatccctgcaaatatg 28263039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Complemental strand, 44568694 - 44568635
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||| |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  44568694 taaaggctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 44568635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 8555817 - 8555767
Alignment:
Q  107 atgacattttaaaataaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    |||| |||||||||||||| |||||||||| ||||  ||||||||||||||    
T  8555817 atgatattttaaaataaaggctaaaatatggttttagtccctgcaaatatg 8555767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 1614910 - 1614849
Alignment:
Q  119 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  1614910 aataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 1614849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 179
Target Start/End: Original strand, 11766906 - 11766971
Alignment:
Q  114 tttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    ||||||| ||||| ||||||||| ||||| |||||||||||||| |  |||| |||||| ||||||    
T  11766906 tttaaaaaaaagattaaaatatggttttggtccctgcaaatatgcctcgttttggttttcgtccct 11766971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 25037755 - 25037808
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||  |||||||||||||| ||||||||  |||||||||||||||    
T  25037755 aaatatgattttagtccctgcaaatatgacgagtttgaattttggtccctggta 25037808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 3975540 - 3975604
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||| ||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  3975540 taaattaaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 3975604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 23399985 - 23399921
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||| |||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  23399985 taaaaaaaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 23399921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 23676461 - 23676397
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| || |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  23676461 taaaatataggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 23676397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 27458390 - 27458454
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||| |||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  27458390 taaaaaaaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 27458454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 157
Target Start/End: Complemental strand, 34878129 - 34878093
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  34878129 taaaggctaaaatatggttttgatccctgcaaatatg 34878093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 35104069 - 35104133
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| |||||||||  ||||| |||||||||||||| |  |||| |||||| |||||||    
T  35104069 taaaataaaggctaaaatataattttggtccctgcaaatatgtctcgttttggttttagtccctg 35104133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 2e-21; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 46075107 - 46075051
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  46075107 ctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttggtccctggta 46075051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 24609921 - 24609973
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24609921 ctaaaatatgtttttggtccctgcaaatatggcgagtttgggttttggtccct 24609973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 9774950 - 9774889
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  9774950 aaaggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggta 9774889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 11710547 - 11710611
Alignment:
Q  119 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||||||||||||||||||||| ||||||  |||| ||||||||||||||||||||    
T  11710547 aataaaggctaaaatatgtttttgatccctgtaaatataacgaggttgggttttggtccctggta 11710611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 27262910 - 27262966
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  27262910 ctaaaatatgtttttggtccctgcaaatatagcgagtttgtgttttggtccctggta 27262966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 27264273 - 27264217
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  27264273 ctaaaatatgattttggtccctgcaaatatagcgagtttgggttttggtccctggta 27264217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 39163081 - 39163025
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||    
T  39163081 ctaaaatatgcttttggtccctgcaaatatggcgaggttgggttttggtccctggta 39163025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 47038862 - 47038924
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||| |||||||||||||||  ||||||||||||| || |||||||||||||||||||||||    
T  47038862 taaaggctaaaatatgtttttagtccctgcaaatatagctagtttgggttttggtccctggta 47038924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 48589018 - 48588965
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  48589018 ctaaaatatgtttttggtccctgtaaatatggtgagtttgggttttggtccctg 48588965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 48594105 - 48594052
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  48594105 ctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctg 48594052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 48598716 - 48598663
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||    
T  48598716 ctaaaatatgtttttggtccctgtaaatatggcgagtttgggttttgatccctg 48598663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 23470026 - 23469970
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  23470026 ctaaaatatgtttttggtccctgcaaatatagcgagtttcggttttgatccctggta 23469970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 24611174 - 24611118
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| |||||| ||||||| |||||||| ||||||||||||||||    
T  24611174 ctaaaatatgtttttggtccctgtaaatatgacgagtttgagttttggtccctggta 24611118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 35721103 - 35721159
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||    
T  35721103 ctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggtccctggta 35721159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 37395635 - 37395691
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  37395635 ctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggta 37395691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 50164405 - 50164461
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||    
T  50164405 ctaaaatatgcttttggtccctgcaaatatggcgagtttgagttttggtccttggta 50164461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 183
Target Start/End: Original strand, 9774040 - 9774095
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||    
T  9774040 taaaatatgtttttggtccctgcaaatataacgagtttgagttttggtccctggta 9774095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 20723752 - 20723689
Alignment:
Q  120 ataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||| |||||||||||||||| ||||||||||||| |||| |||| ||||| ||||||||||    
T  20723752 ataaaggctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttagtccctggta 20723689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 11711310 - 11711255
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| |||| |||||| ||||||||||||||    
T  11711310 ctaaaatatgtttttggtccctgcaaatatagcgaatttggg-tttggtccctggta 11711255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 13074631 - 13074575
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||| |||||| | |||||||||||| |||||||| ||||||||||||||||    
T  13074631 ctaaaatatatttttggttcctgcaaatatgacgagtttgagttttggtccctggta 13074575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 20722474 - 20722530
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| || ||||| ||||||||||||| |||| |||||||||||||||||||||    
T  20722474 ctaaaatgtgcttttggtccctgcaaatatagcgaatttgggttttggtccctggta 20722530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 24427426 - 24427370
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||||| ||||||||||    
T  24427426 ctaaaatatgtttttggtccctacaaatatagcgagtttgagttttagtccctggta 24427370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 26863862 - 26863918
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| |||||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  26863862 ctaaaatgtgtttttggtccctgcaaatatagcgaatttgagttttggtccctggta 26863918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 46073887 - 46073943
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||||||||||||||||| || | |||||||||| ||||||||||    
T  46073887 ctaaaatatgcttttgatccctgcaaatatagcaaatttgggttttagtccctggta 46073943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 2604184 - 2604138
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttg 173  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||||    
T  2604184 ctaaaatatgtttttagtccctgcaaatatggggagtttgggttttg 2604138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 17976766 - 17976819
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||| | ||||||||||| |||| |||||||||||||||||||||    
T  17976766 aaatatggttttggttcctgcaaatatagcgaatttgggttttggtccctggta 17976819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 17977613 - 17977560
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||| ||||||||||||| |||| ||||||||||||||| |||||    
T  17977613 aaatatggttttggtccctgcaaatatagcgaatttgggttttggtccttggta 17977560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 27816774 - 27816721
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||| ||||||||||||| || | |||||||||||||||||||||    
T  27816774 aaatatggttttggtccctgcaaatatagccaatttgggttttggtccctggta 27816721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 25658309 - 25658269
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  25658309 aaaataaagactaaaatattcttttgatccctgcaaatatg 25658269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 34934804 - 34934748
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||  ||||||||||||| |||| ||||||||||||||| |||||    
T  34934804 ctaaaatatgctttttgtccctgcaaatatagcgaatttgggttttggtccttggta 34934748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 35722342 - 35722286
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| |||||| |||||| |||| ||||| |||||||| ||||||    
T  35722342 ctaaaatatgtttttggtccctgtaaatatagcgaatttggattttggtctctggta 35722286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 35911945 - 35911889
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| |||| ||||| ||||||||| |||||    
T  35911945 ctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccttggta 35911889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 37396897 - 37396841
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| |||| |||| |||||||||| |||||    
T  37396897 ctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggta 37396841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 33000677 - 33000614
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  33000677 aaaataaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 33000614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 45290448 - 45290515
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||||||||| ||||  |||||||||||||| |  |||| |||||| ||||||||||    
T  45290448 taaaataaaggctaaaatatggttttagtccctgcaaatatgtctcgttttggttttagtccctggta 45290515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 174
Target Start/End: Complemental strand, 45979553 - 45979506
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttgg 174  Q
    |||||||||||||||| ||||||||||||| |||| |||| |||||||    
T  45979553 ctaaaatatgtttttggtccctgcaaatatagcgaatttgagttttgg 45979506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 180
Target Start/End: Original strand, 51240119 - 51240174
Alignment:
Q  125 gactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||||||| || |||||||||| |||| ||||| ||||| ||||||    
T  51240119 gactaaaatatgtttttggtctctgcaaatatagcgaatttggattttgatccctg 51240174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 10631531 - 10631473
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||| |||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  10631531 aaaggctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 10631473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 180
Target Start/End: Original strand, 28198435 - 28198485
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||| |||||||| ||| |||||||||||||||||||  ||||||||||||    
T  28198435 aaatgtgtttttgttccttgcaaatatggcgagtttgaattttggtccctg 28198485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 48856214 - 48856260
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttg 173  Q
    ||||||||||||||| |||| ||||||||||| |||||| |||||||    
T  48856214 ctaaaatatgtttttaatccttgcaaatatggtgagtttaggttttg 48856260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 180
Target Start/End: Original strand, 12360673 - 12360718
Alignment:
Q  135 tgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||||||||||||||||| |  |||| ||||||||||||||    
T  12360673 tgtttttgatccctgcaaatatgtcccgttttggttttggtccctg 12360718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 157
Target Start/End: Complemental strand, 17130088 - 17130051
Alignment:
Q  120 ataaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  17130088 ataaagactaaaatatggttttggtccctgcaaatatg 17130051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 24507481 - 24507534
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  24507481 ctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 24507534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 27815446 - 27815499
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| || || ||||||||||||| || | |||||||||||||||||||||    
T  27815446 aaatatggttctggtccctgcaaatatagccaatttgggttttggtccctggta 27815499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 39162825 - 39162882
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaata-tggcgagtttgggttttggtccctggta 183  Q
    ||||| |||| ||||| |||||||||||| |||||||||||| ||||||||| |||||    
T  39162825 ctaaattatgcttttggtccctgcaaataatggcgagtttggattttggtccttggta 39162882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 4789307 - 4789363
Alignment:
Q  124 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  4789307 agactaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 4789363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 15526371 - 15526307
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||| ||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  15526371 taaaatcaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 15526307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 19623015 - 19622959
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||| ||||||||||||||| |  |||| |||||| ||||||||||    
T  19623015 ctaaaatatggttttaatccctgcaaatatgcctcgttttggttttagtccctggta 19622959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 26207269 - 26207333
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||| ||||||||||||||| ||||| ||| |||||||||| |  |||| |||||| |||||||    
T  26207269 taaaaaaaagactaaaatatggttttggtccttgcaaatatgtctcgttttggttttagtccctg 26207333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 52254175 - 52254215
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    ||||||||| |||||||||| |||| |||||||||||||||    
T  52254175 aaaataaaggctaaaatatggttttaatccctgcaaatatg 52254215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 122 - 180
Target Start/End: Original strand, 17516159 - 17516217
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  17516159 aaagactaaaatatgtttttggtccctgcaaatatggtgagtttgggttttggtccctg 17516217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 17517366 - 17517310
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  17517366 ctaaaatatgtttttggtccctgcaaatatggcgagtttgagttttggtccctggta 17517310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 34998198 - 34998142
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  34998198 ctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggta 34998142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 29291361 - 29291414
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||    
T  29291361 ctaaaatatgcttttggtccttgcaaatatggcgagtttgggttttggtccctg 29291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 1171707 - 1171655
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||||||||    
T  1171707 taaaatatgtttttgatccctgcaaatataacgagtttggtttttggtccctg 1171655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 18810534 - 18810590
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  18810534 ctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggta 18810590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 21165248 - 21165304
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  21165248 ctaaaatatgcttttggtccctgcaaatatagcgagtttgtgttttggtccctggta 21165304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 3279555 - 3279500
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||||||||||||||||| |||||||||  ||||||| |||||||    
T  3279555 taaaatatgtttttgatccctgcaaatatagcgagtttgaattttggttcctggta 3279500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 1974209 - 1974156
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||||||||| ||||||||| |||| |||| |||||||||||||    
T  1974209 ctaaaatatgtttttgatccttgcaaatatagcgaatttgagttttggtccctg 1974156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 16995448 - 16995509
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| |||||||||||||||| |||||||||||||   || |||||||||||||||||||||    
T  16995448 aaaggctaaaatatgtttttggtccctgcaaatataaagaatttgggttttggtccctggta 16995509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 25440735 - 25440674
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||| |||||| ||| | |||||||||||||||||  |||||||||||||||    
T  25440735 aaagactaaaatatatttttggtccttacaaatatggcgagtttgaattttggtccctggta 25440674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 20393325 - 20393269
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||  ||||||||||    
T  20393325 ctaaaatatgcttttgatccctgcaaatatagcgaatttgggtttcagtccctggta 20393269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 172
Target Start/End: Original strand, 20895953 - 20896005
Alignment:
Q  120 ataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggtttt 172  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||| |||||    
T  20895953 ataaagactaaaatatgtttttggtccctgcaaatatagcgaatttgagtttt 20896005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 20897554 - 20897498
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| | || |||||||||||||||||||||    
T  20897554 ctaaaatatggttttggtccctgcaaatatagtgaatttgggttttggtccctggta 20897498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 21953208 - 21953264
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| |||| ||||| |||||||||||||||    
T  21953208 ctaaaatatgcttttggtccctgcaaatatagcgaatttggattttggtccctggta 21953264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 30253607 - 30253547
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 176  Q
    ||||| ||||||||||||||||||||| ||||||||||||  |||||| || |||||||||    
T  30253607 taaaaaaaagactaaaatatgtttttggtccctgcaaatacagcgagtatgagttttggtc 30253547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 34995116 - 34995172
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||||||||||||||||| |||| |||| |||||||| |||||||    
T  34995116 ctaaaatatgcttttgatccctgcaaatatagcgaatttgagttttggttcctggta 34995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 1972402 - 1972458
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||  |||| |||||||||| ||| ||||||    
T  1972402 ctaaaatatgtttttggtccctgcaaataaagcgaatttgggttttagtctctggta 1972458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 3276369 - 3276421
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| ||||||||||||| |||| ||||| |||| ||||||    
T  3276369 ctaaaatatgtttttggtccctgcaaatatagcgaatttggattttagtccct 3276421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 13617528 - 13617584
Alignment:
Q  124 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  13617528 agactaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 13617584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 20391217 - 20391268
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    ||||||||| ||||| ||||||||||||| | || |||||||||||||||||    
T  20391217 taaaatatgcttttggtccctgcaaatatagtgaatttgggttttggtccct 20391268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 17000334 - 17000281
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||  ||||| ||||||||||| | | |||||||||||||||||||||    
T  17000334 ctaaaatatacttttggtccctgcaaatgtagtgagtttgggttttggtccctg 17000281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 157
Target Start/End: Original strand, 19320758 - 19320799
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    |||||||| |||||||||||| ||||| ||||||||||||||    
T  19320758 taaaataatgactaaaatatggttttggtccctgcaaatatg 19320799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 31198617 - 31198670
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  31198617 ctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 31198670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 8680777 - 8680833
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||  |||||||||||||| |  |||| |||||| ||||||||||    
T  8680777 ctaaaatatgtttttagtccctgcaaatatgcctcgttttggttttagtccctggta 8680833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 12419936 - 12419880
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||| ||||||||||||||| |  |||| |||||| ||||||||||    
T  12419936 ctaaaatatggttttaatccctgcaaatatgcctcgttttggttttagtccctggta 12419880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 25439648 - 25439696
Alignment:
Q  125 gactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttg 173  Q
    |||||||||||||||||  |||||||||||||  ||| |||||||||||    
T  25439648 gactaaaatatgtttttagtccctgcaaatataacgattttgggttttg 25439696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 32885675 - 32885731
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||| ||||||||||||||| |  |||| |||||| ||||||||||    
T  32885675 ctaaaatatggttttaatccctgcaaatatgcctcgttttggttttagtccctggta 32885731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 3936574 - 3936636
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  3936574 taaaggctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccctggta 3936636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 3205162 - 3205103
Alignment:
Q  124 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  3205162 agactaaaatatgcttttgatccctgcaaatatgatgagtttgggttttggtccctggta 3205103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 27571191 - 27571130
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| |||||||||| ||||| ||||||||||||| |||||||||||||||| |||||||||    
T  27571191 aaaggctaaaatatgattttggtccctgcaaatatagcgagtttgggttttgatccctggta 27571130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 4565395 - 4565451
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||  ||||| ||||||| ||||||||||||||||||||||||||    
T  4565395 ctaaaatatgtttttagtccctacaaatatagcgagtttgggttttggtccctggta 4565451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 6894067 - 6894011
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||| |||||||||| ||||||| |||||||||||||||||    
T  6894067 ctaaaatatgtttttggtccttgcaaatatgacgagtttaggttttggtccctggta 6894011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 15604117 - 15604063
Alignment:
Q  124 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||    
T  15604117 agactaaaatgtgtttttggtcc-tgcaaatatggcgagtttgggttttggtccct 15604063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 14809165 - 14809222
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggtag 184  Q
    |||||||||||||||||||||| ||||||| |||| ||||| ||||||||||| ||||    
T  14809165 ctaaaatatgtttttgatccctacaaatatagcgaatttggattttggtccctagtag 14809222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 3954054 - 3954110
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||| |||||||||  ||| |||||||||||||||||||||    
T  3954054 ctaaaatatgtttttggtccttgcaaatatatcgaatttgggttttggtccctggta 3954110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 31540498 - 31540554
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| |||||||||||||  ||| ||||||||||||| |||||||    
T  31540498 ctaaaatatgtttttggtccctgcaaatataacgaatttgggttttggtacctggta 31540554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 31541679 - 31541623
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||||||||||||||||||  ||| ||| |||||| ||||||||||    
T  31541679 ctaaaatatgtttttgatccctgcaaatataacgaattttggtttttgtccctggta 31541623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 15599767 - 15599818
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 178  Q
    |||||||||| ||||| ||||| |||||||||||| ||||||||||||||||    
T  15599767 ctaaaatatgcttttggtccctacaaatatggcgaatttgggttttggtccc 15599818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 34911890 - 34911833
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||| |||||||||| ||||| ||||||||||||| |||||||||| ||||| |||||    
T  34911890 aaaggctaaaatatgattttggtccctgcaaatatagcgagtttggattttgatccct 34911833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 3938117 - 3938061
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||  ||||||||||||| || ||||| |||||||||||||||||    
T  3938117 ctaaaatatgcttttagtccctgcaaatatagcaagtttaggttttggtccctggta 3938061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 27097314 - 27097362
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 175  Q
    ||||||||||||||||||||| | ||||||||  |||||||||||||||    
T  27097314 ctaaaatatgtttttgatccccgtaaatatggtaagtttgggttttggt 27097362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 27570058 - 27570109
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccc 178  Q
    |||||||||| ||||| ||| ||||||||| |||||||||||||||| ||||    
T  27570058 ctaaaatatgattttggtccttgcaaatatagcgagtttgggttttgttccc 27570109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 180
Target Start/End: Complemental strand, 6912860 - 6912802
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  6912860 aaagactaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 6912802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 25252643 - 25252681
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagttt 165  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  25252643 ctaaaatatgtttttgatctctgcaaatatagcgagttt 25252681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 25254198 - 25254132
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||| || ||||||||||| ||||| |||||||||||||   ||||||| |||||| |||||||||    
T  25254198 aaaattaaaactaaaatatgcttttggtccctgcaaatatatagagtttgagttttgatccctggta 25254132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 165
Target Start/End: Original strand, 25316428 - 25316466
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagttt 165  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  25316428 ctaaaatatgtttttgatctctgcaaatatagcgagttt 25316466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 25317988 - 25317922
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||| || ||||||||||| ||||| |||||||||||||   ||||||| |||||| |||||||||    
T  25317988 aaaattaaaactaaaatatgcttttggtccctgcaaatatatagagtttgagttttgatccctggta 25317922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 180
Target Start/End: Complemental strand, 40764787 - 40764725
Alignment:
Q  118 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  40764787 aaataaaggctaaaatatggttttgctccctgcaaatatgcctcgttttggttttagtccctg 40764725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 19565457 - 19565522
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| ||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  19565457 ttaaaatcaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 19565522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 34910595 - 34910643
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 176  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||    
T  34910595 ctaaaatatgttttt-atccctgcaaatatagcaagtttgagttttggtc 34910643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 180
Target Start/End: Complemental strand, 26071613 - 26071561
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  26071613 taaaatatgattttgatccctgcaaatatgtctcgttttggttttagtccctg 26071561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 29875402 - 29875458
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| |||| ||||||||||||||| |  |||| |||||| ||||||||||    
T  29875402 ctaaaatatgattttaatccctgcaaatatgcctcgttttggttttagtccctggta 29875458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 22534784 - 22534723
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  22534784 aaaggctaaaatatgcttttgatccctgcaaatatagcgagtttgggttttggtccctggta 22534723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 10718516 - 10718449
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| || |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  10718516 taaaatataggctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggta 10718449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 3483632 - 3483688
Alignment:
Q  124 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    
T  3483632 agactaaaatatgtttttggtccctgcaaatatagcgagtttgagttttggtccctg 3483688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 10717123 - 10717179
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  10717123 ctaaaatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggta 10717179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 14197827 - 14197879
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  14197827 ctaaaatatgtttttggtccctgcaaatatggcgagtttggattttggtccct 14197879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 28998050 - 28997998
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  28998050 ctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttggtccct 28997998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 36588219 - 36588280
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| |||||||||| ||||| ||||||||||||| ||||||||| ||||||||||||||||    
T  36588219 aaaggctaaaatatgcttttggtccctgcaaatatagcgagtttgcgttttggtccctggta 36588280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 28996836 - 28996892
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  28996836 ctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggta 28996892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 45518017 - 45517962
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggt 182  Q
    |||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||    
T  45518017 ctaaaatatgcttttggtccctgcaagtatagcgagtttgggttttggtccctggt 45517962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 1420499 - 1420446
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||||||||| ||||||||||||| |||||||||| | ||||||||||    
T  1420499 ctaaaatatgtttttggtccctgcaaatatagcgagtttggatattggtccctg 1420446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 22533314 - 22533375
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| |||||||||| ||||| |||||| | |||| ||||||||||||||||||||||||||    
T  22533314 aaaggctaaaatatgcttttggtccctgtatatatagcgagtttgggttttggtccctggta 22533375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 39440479 - 39440426
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||    
T  39440479 ctaaaatatgcttttggtccttgcaaatatggcgagtttgagttttggtccctg 39440426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 4182624 - 4182680
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| |||||| |||||| |||| |||||||||||||||||||||    
T  4182624 ctaaaatatgcttttggtccctgtaaatatagcgaatttgggttttggtccctggta 4182680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 22270945 - 22271001
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||||||||||||||||| |||| ||||| |||| ||||||||||    
T  22270945 ctaaaatatgcttttgatccctgcaaatatagcgaatttggattttagtccctggta 22271001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 22272327 - 22272271
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| |||| |||||||| |||| |||||||||||||||||||||    
T  22272327 ctaaaatatgcttttggtccccgcaaatatagcgaatttgggttttggtccctggta 22272271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 39439926 - 39439982
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| |||||||||||||||| |||||| ||||||| ||||||||    
T  39439926 ctaaaatatgattttggtccctgcaaatatggctagtttgagttttggaccctggta 39439982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 10872907 - 10872970
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||||| |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  10872907 aaaataaaggctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 10872970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 3680799 - 3680746
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| |||||||||||||||||||| |  |||| ||||||||||||||    
T  3680799 ctaaaatatgattttgatccctgcaaatatgcctcgttttggttttggtccctg 3680746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 45516394 - 45516455
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||||||||||  ||| || |||||| |||| |||||||||||||| ||||||    
T  45516394 aaagactaaaatatgtttttagtccatgtaaatatagcgaatttgggttttggtctctggta 45516455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 3031600 - 3031544
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| |||||| |||||||||   ||| |||||||||||||||||    
T  3031600 ctaaaatatgtttttggtccctgtaaatatggctcatttaggttttggtccctggta 3031544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 4184036 - 4183980
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||  ||||||||||||| | | ||||||||||||||||||||||    
T  4184036 ctaaaatatgcttttagtccctgcaaatatagtgcgtttgggttttggtccctggta 4183980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 27117986 - 27117922
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    ||||||||||| |||||||||| ||||| |||||||||||||| |   ||| |||||||||||||    
T  27117986 ttaaaataaaggctaaaatatggttttggtccctgcaaatatgcctcattttggttttggtccct 27117922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 30124280 - 30124224
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||  || |||||| ||||||||||||||||    
T  30124280 ctaaaatatgcttttggtccctgcaaataaagcaagtttgagttttggtccctggta 30124224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 38456787 - 38456731
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| || | ||| |||||||||||||||||    
T  38456787 ctaaaatatgcttttggtccctgcaaatatagcaaatttaggttttggtccctggta 38456731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 38658483 - 38658539
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| || || ||| ||||||||| |||| |||||||||||||||||||||    
T  38658483 ctaaaatatgcttctggtccatgcaaatatagcgaatttgggttttggtccctggta 38658539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 180
Target Start/End: Original strand, 20984142 - 20984201
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||| |||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  20984142 taaaggctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 20984201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 41357422 - 41357375
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 175  Q
    ||||||||||||||| |||  |||||||||| ||||||||||||||||    
T  41357422 taaaatatgtttttggtcctcgcaaatatggtgagtttgggttttggt 41357375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 179
Target Start/End: Original strand, 38455447 - 38455501
Alignment:
Q  125 gactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||||| ||| ||||||||| | || |||| ||||||||||||    
T  38455447 gactaaaatatgtttttggtccttgcaaatatagtgaatttgagttttggtccct 38455501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 1376940 - 1376993
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||| ||||||||||||| || | ||||| |||||||||||||||    
T  1376940 aaatatgattttggtccctgcaaatatagccaatttggattttggtccctggta 1376993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 130 - 183
Target Start/End: Complemental strand, 1385609 - 1385556
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||| ||||||||||||| || | ||||| |||||||||||||||    
T  1385609 aaatatggttttggtccctgcaaatatagccaatttggattttggtccctggta 1385556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 4474042 - 4473989
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  4474042 ctaaaatatggttttgatccctgcaaatatgcctcgttttggttttagtccctg 4473989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 28346384 - 28346449
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| ||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  28346384 ttaaaattaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 28346449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 36589449 - 36589388
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| |||||||||| ||||  | ||||||||||| |||||||| ||||||||||| |||||    
T  36589449 aaaggctaaaatatgattttagttcctgcaaatatagcgagtttaggttttggtccttggta 36589388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 1526170 - 1526114
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||  ||||||||||||||||  |||| |||||| ||||||||||    
T  1526170 ctaaaatatggttttagtccctgcaaatatggctcgttttggttttagtccctggta 1526114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 11019511 - 11019575
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||| ||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  11019511 taaaattaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 11019575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 11976364 - 11976428
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||| ||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  11976364 taaattaaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 11976428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 44997923 - 44997963
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    ||||||||| |||||||||| ||||| ||||||||||||||    
T  44997923 aaaataaaggctaaaatatgattttggtccctgcaaatatg 44997963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 33137285 - 33137229
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  33137285 ctaaaatatgtttttgatccctgcaaatatagcgagtttgggttttagtccctggta 33137229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 3879088 - 3879144
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  3879088 ctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggta 3879144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 22204057 - 22204113
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||    
T  22204057 ctaaaatatgtttttggtccctgcaaatatagcgagtttgggttttagtccctggta 22204113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 42359403 - 42359347
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||    
T  42359403 ctaaaatatgtttttggtccctgcaaatatagcgagtttggattttggtccctggta 42359347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 54121757 - 54121701
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||    
T  54121757 ctaaaatatgattttgctccctgcaaatacggcgagtttgggttttggtccctggta 54121701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 3880553 - 3880501
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| | ||||||||||| ||||||||||||||||||||||    
T  3880553 ctaaaatatgtttttggttcctgcaaatatagcgagtttgggttttggtccct 3880501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 29060947 - 29060883
Alignment:
Q  119 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||||||||||||| |||||||||||||| |||||||||  ||||||||| |||||    
T  29060947 aataaaggctaaaatatgtttttaatccctgcaaatatagcgagtttgaattttggtccttggta 29060883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 32699371 - 32699319
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| |||||| |||||| ||||||||||||||||||||||    
T  32699371 ctaaaatatgtttttggtccctgtaaatatagcgagtttgggttttggtccct 32699319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 33134893 - 33134945
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    ||||||||||||||||||||||||||||||| ||||||||| | |||||||||    
T  33134893 ctaaaatatgtttttgatccctgcaaatatgacgagtttggatattggtccct 33134945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 45618287 - 45618343
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| ||||| ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  45618287 ctaatatatgcttttggtccctgcaaatatagcgagtttgggttttggtccctggta 45618343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 183
Target Start/End: Complemental strand, 17371901 - 17371846
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||| |||||||||||||||||||  ||| |||||||||||||||||||||    
T  17371901 taaaatatgcttttgatccctgcaaatataacgaatttgggttttggtccctggta 17371846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 118 - 180
Target Start/End: Original strand, 34659699 - 34659761
Alignment:
Q  118 aaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||| ||| |||||||||| ||||| |||||||||||||||||||||  ||||||||||||||    
T  34659699 aaatgaaggctaaaatatgcttttggtccctgcaaatatggcgagttaaggttttggtccctg 34659761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 41935131 - 41935078
Alignment:
Q  123 aagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 176  Q
    |||| ||||||||||||||| |||||||||||||  ||||||||||||||||||    
T  41935131 aagattaaaatatgtttttggtccctgcaaatataacgagtttgggttttggtc 41935078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 55542641 - 55542580
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| ||||||| |||||||||||||||||||||| ||  ||||||| ||||||||||||||    
T  55542641 aaaggctaaaatctgtttttgatccctgcaaatatagcatgtttgggatttggtccctggta 55542580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 19674416 - 19674472
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||| ||||||||| ||||||||| ||||||||||||||||    
T  19674416 ctaaaatatgcttttggtccttgcaaatatagcgagtttgagttttggtccctggta 19674472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 38166497 - 38166545
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 175  Q
    ||||||||||||||| |||||||||||||| |||||||||| |||||||    
T  38166497 ctaaaatatgtttttaatccctgcaaatatagcgagtttggattttggt 38166545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 183
Target Start/End: Original strand, 42358022 - 42358090
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||| |||| |||||||||||||||| ||||||||||||| |  |||||| |||||| |||||||||    
T  42358022 ttaaaaaaaaggctaaaatatgtttttggtccctgcaaatataggaagtttgagttttgatccctggta 42358090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 45619788 - 45619732
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||  ||||||||||||| |||||||| ||||||| |||||||||    
T  45619788 ctaaaatatgtttttagtccctgcaaatatagcgagtttaggttttgttccctggta 45619732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 40198593 - 40198632
Alignment:
Q  144 tccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  40198593 tccctgcaaatatagcgagtttgggttttggtccctggta 40198632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 183
Target Start/End: Original strand, 16573374 - 16573436
Alignment:
Q  121 taaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||| |||||||||| ||||| || || |||||||||||| |||||||||||||| ||||||    
T  16573374 taaaggctaaaatatgcttttggtctctacaaatatggcgaatttgggttttggtctctggta 16573436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 127 - 177
Target Start/End: Original strand, 41933820 - 41933870
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtcc 177  Q
    |||||||||| ||||| || |||||||||| ||||||||||||||||||||    
T  41933820 ctaaaatatgattttggtctctgcaaatatagcgagtttgggttttggtcc 41933870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 5259208 - 5259171
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtt 164  Q
    |||||||||||||||| |||||||||||||||||||||    
T  5259208 ctaaaatatgtttttggtccctgcaaatatggcgagtt 5259171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 19675677 - 19675624
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| |||||||||||||  ||||||||| ||||||||||||    
T  19675677 ctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtccctg 19675624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 16916066 - 16916118
Alignment:
Q  124 agactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 176  Q
    ||||||||||||  ||||| ||||||||||||||| ||||||| |||||||||    
T  16916066 agactaaaatatacttttggtccctgcaaatatggtgagtttgagttttggtc 16916118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 26412182 - 26412245
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||| || |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  26412182 aaaatataggctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 26412245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 4211563 - 4211617
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctgg 181  Q
    |||||||||| ||||| |||||||||||||| |  |||| |||||||||||||||    
T  4211563 ctaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctgg 4211617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 12152491 - 12152438
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| |||||||||||||| |  |||| ||||||||||||||    
T  12152491 ctaaaatatggttttggtccctgcaaatatgtctcgttttggttttggtccctg 12152438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 14487804 - 14487857
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| |||||||||||||| |  |||| ||||||||||||||    
T  14487804 ctaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctg 14487857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 14791812 - 14791751
Alignment:
Q  119 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  14791812 aataaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 14791751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 17281568 - 17281629
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| ||||||| || ||||  ||||||||||||| |||| ||||| |||||||||||||||    
T  17281568 aaaggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggta 17281629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 17370070 - 17370131
Alignment:
Q  122 aaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||| ||||||| || ||||  ||||||||||||| |||| ||||| |||||||||||||||    
T  17370070 aaaggctaaaatgtgcttttagtccctgcaaatatagcgaatttggattttggtccctggta 17370131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 23245593 - 23245540
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| |||||||||||||||||||| |  |||| |||||| |||||||    
T  23245593 ctaaaatatggttttgatccctgcaaatatgtctcgttttggttttagtccctg 23245540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 26412582 - 26412529
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| ||||||||||||||||  |||| |||||| |||||||    
T  26412582 ctaaaatatggttttggtccctgcaaatatggctcgttttggttttagtccctg 26412529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 30046798 - 30046737
Alignment:
Q  119 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  30046798 aataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 30046737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 30061139 - 30061078
Alignment:
Q  119 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  30061139 aataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 30061078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 32698001 - 32698046
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggtttt 172  Q
    |||||||||| ||||||||||||||||||| |||| ||| ||||||    
T  32698001 ctaaaatatgattttgatccctgcaaatatagcgaatttaggtttt 32698046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 43231395 - 43231334
Alignment:
Q  119 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  43231395 aataaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 43231334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 180
Target Start/End: Original strand, 46292394 - 46292447
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| |||||||||||||| |  |||| ||||||||||||||    
T  46292394 ctaaaatatggttttggtccctgcaaatatgcctcgttttggttttggtccctg 46292447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 2322440 - 2322400
Alignment:
Q  117 aaaataaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    |||| |||| |||||||||| ||||||||||||||||||||    
T  2322440 aaaaaaaaggctaaaatatggttttgatccctgcaaatatg 2322400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 24774036 - 24774100
Alignment:
Q  116 taaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||| |||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  24774036 taaaaaaaaggctaaaatatggttttggtccctgcaaatatgcctcgttttggttttagtccctg 24774100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 35054665 - 35054713
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtc 176  Q
    ||||||||| ||||  ||||||||||||| |||| ||||||||||||||    
T  35054665 taaaatatgattttagtccctgcaaatatagcgaatttgggttttggtc 35054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 44705301 - 44705349
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggt 175  Q
    |||||||||||||||| || |||||||||| | || |||||||||||||    
T  44705301 ctaaaatatgtttttggtctctgcaaatatagtgaatttgggttttggt 44705349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 183
Target Start/End: Original strand, 47359512 - 47359572
Alignment:
Q  123 aagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||||||  | | ||||||||| |||| |||| ||||| ||||||||||    
T  47359512 aagactaaaatatgtttttcgttcttgcaaatatagcgaatttgagttttagtccctggta 47359572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 344942 - 344995
Alignment:
Q  130 aaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  344942 aaatatgattttggtccctgcaaatatggcgagtttgggttttggtccctggta 344995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 374337 - 374389
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  374337 ctaaaatatgattttgatccctgcaaatatagcgagtttgggttttggtccct 374389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 345954 - 345902
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    |||||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  345954 ctaaaatatgtttttggtccctgcaaatatagcgaatttgggttttggtccct 345902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 376426 - 376381
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggtttt 172  Q
    |||||||||| ||||| ||||||||||||| |||||||||||||||    
T  376426 ctaaaatatgcttttggtccctgcaaatatagcgagtttgggtttt 376381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 9924 - 9980
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||    
T  9924 ctaaaatatgcttttgatccctgcaaatatagcgagtttggattttggtccctggta 9980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 11579 - 11523
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||||||||| ||||||||||||| |||  |||||||||||||||||||||    
T  11579 ctaaaatatgtttttggtccctgcaaatatagcgtatttgggttttggtccctggta 11523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 10317 - 10373
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| |||| |||| |||||||||| |||||    
T  10317 ctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccttggta 10373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 488 - 432
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  488 ctaaaatatgattttggtccctgcaaatatagtgagtttgggttttggtccctggta 432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 30964 - 30908
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| | ||||||||||||||||||||||||    
T  30964 ctaaaatatggttttggtccctgcaaatatagtgagtttgggttttggtccctggta 30908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 29731 - 29787
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||   ||||||||| |||||||||||||||    
T  29731 ctaaaatatgcttttggtccctgcaaataaaacgagtttggattttggtccctggta 29787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 121042 - 120986
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| |||||||||||||  |||||||||||||||||||||||||    
T  121042 ctaaaatatgcttttggtccctgcaaatataacgagtttgggttttggtccctggta 120986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 119595 - 119651
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| ||||||||||||| |||| |||| ||||||||||||||||    
T  119595 ctaaaatatgcttttggtccctgcaaatatagcgaatttgagttttggtccctggta 119651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 180
Target Start/End: Complemental strand, 42812 - 42759
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    |||||||||| ||||| ||| ||||||||||||||||||| |||||||||||||    
T  42812 ctaaaatatgcttttggtccttgcaaatatggcgagtttgagttttggtccctg 42759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 1192 - 1140
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    ||||||||| |||||| || |||||||||||||||||||| ||||||||||||    
T  1192 ctaaaatatatttttggtctctgcaaatatggcgagtttgagttttggtccct 1140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 202581 - 202637
Alignment:
Q  127 ctaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||||||| ||||| |||||||||||||  ||||||||| |||||||||| ||||    
T  202581 ctaaaatatgcttttggtccctgcaaatataacgagtttggattttggtcccgggta 202637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Original strand, 1863 - 1914
Alignment:
Q  128 taaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccct 179  Q
    ||||||||| ||||| ||||||||||||| ||||||||| |||||| |||||    
T  1863 taaaatatgattttggtccctgcaaatatagcgagtttgagttttgatccct 1914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 21686 - 21728
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatg 157  Q
    |||||| |||| |||||||||| ||||||||||||||||||||    
T  21686 ttaaaaaaaaggctaaaatatggttttgatccctgcaaatatg 21728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 180
Target Start/End: Original strand, 47919 - 47980
Alignment:
Q  119 aataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctg 180  Q
    ||||||| |||||||||| ||||| |||||||||||||| |  |||| |||||| |||||||    
T  47919 aataaaggctaaaatatggttttggtccctgcaaatatgtctcgttttggttttagtccctg 47980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 4298 - 4230
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||| |||| |||||||||| |||| ||||||||||||||| |  |||| |||||| |||| |||||    
T  4298 ttaaaacaaaggctaaaatatggttttaatccctgcaaatatgtctcgttttggttttagtccttggta 4230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 19480 - 19412
Alignment:
Q  115 ttaaaataaagactaaaatatgtttttgatccctgcaaatatggcgagtttgggttttggtccctggta 183  Q
    |||||| |||| |||||||||| |||| ||||||||||||||| |  |||| |||||| |||| |||||    
T  19480 ttaaaacaaaggctaaaatatggttttaatccctgcaaatatgtctcgttttggttttagtccttggta 19412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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