View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11400_low_6 (Length: 715)

Name: NF11400_low_6
Description: NF11400
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11400_low_6
NF11400_low_6
[»] chr3 (65 HSPs)
chr3 (5-368)||(52824040-52824403)
chr3 (457-555)||(27714897-27714995)
chr3 (457-551)||(53982011-53982105)
chr3 (457-551)||(33644200-33644294)
chr3 (457-550)||(31456690-31456783)
chr3 (457-553)||(49607412-49607508)
chr3 (457-546)||(52629305-52629394)
chr3 (457-553)||(54868901-54868997)
chr3 (457-551)||(8076393-8076487)
chr3 (478-553)||(11095380-11095455)
chr3 (457-552)||(17470404-17470499)
chr3 (457-551)||(26141538-26141632)
chr3 (461-547)||(48587101-48587187)
chr3 (472-553)||(33118872-33118953)
chr3 (466-553)||(36707439-36707526)
chr3 (457-551)||(14623845-14623939)
chr3 (457-547)||(30801739-30801829)
chr3 (457-546)||(26754700-26754789)
chr3 (457-552)||(35536625-35536720)
chr3 (457-550)||(13898061-13898154)
chr3 (366-427)||(33644324-33644385)
chr3 (457-553)||(11907369-11907465)
chr3 (457-552)||(8956761-8956856)
chr3 (373-427)||(53982135-53982189)
chr3 (484-553)||(11347955-11348024)
chr3 (366-427)||(48587016-48587077)
chr3 (367-427)||(11095283-11095343)
chr3 (484-552)||(24699987-24700055)
chr3 (457-553)||(41189770-41189866)
chr3 (457-551)||(20764921-20765015)
chr3 (373-427)||(31456813-31456867)
chr3 (461-551)||(45058563-45058652)
chr3 (457-551)||(47531865-47531959)
chr3 (373-427)||(49607538-49607592)
chr3 (457-551)||(51419366-51419460)
chr3 (366-427)||(52629424-52629485)
chr3 (366-427)||(54868810-54868871)
chr3 (457-552)||(9562998-9563093)
chr3 (373-427)||(11347844-11347898)
chr3 (469-551)||(41080709-41080790)
chr3 (484-553)||(35965807-35965876)
chr3 (461-529)||(36331339-36331407)
chr3 (489-552)||(36331416-36331479)
chr3 (373-427)||(9563123-9563177)
chr3 (373-427)||(20764837-20764891)
chr3 (373-427)||(26141452-26141506)
chr3 (373-423)||(33118772-33118822)
chr3 (373-427)||(36707350-36707404)
chr3 (465-546)||(42823116-42823197)
chr3 (373-421)||(30801655-30801703)
chr3 (484-552)||(21746214-21746284)
chr3 (457-552)||(48375712-48375807)
chr3 (486-553)||(1758491-1758560)
chr3 (457-555)||(35093581-35093679)
chr3 (373-423)||(35536754-35536804)
chr3 (373-427)||(41189686-41189740)
chr3 (373-427)||(51419282-51419336)
chr3 (484-548)||(25407180-25407245)
chr3 (373-426)||(35965704-35965757)
chr3 (373-421)||(27714825-27714873)
chr3 (368-427)||(17470529-17470588)
chr3 (373-423)||(8076521-8076571)
chr3 (373-427)||(47531989-47532043)
chr3 (484-525)||(52629954-52629994)
chr3 (484-525)||(53581792-53581832)
[»] chr5 (42 HSPs)
chr5 (457-659)||(36732948-36733150)
chr5 (457-553)||(18520890-18520986)
chr5 (457-551)||(42414308-42414402)
chr5 (457-552)||(2740273-2740368)
chr5 (457-551)||(40145407-40145501)
chr5 (457-553)||(13811650-13811746)
chr5 (457-551)||(14831814-14831908)
chr5 (457-551)||(33149644-33149738)
chr5 (457-551)||(35785199-35785293)
chr5 (457-551)||(28177775-28177869)
chr5 (457-551)||(35943898-35943992)
chr5 (461-553)||(3921275-3921367)
chr5 (457-553)||(15409616-15409712)
chr5 (457-552)||(6679697-6679792)
chr5 (492-550)||(36875644-36875702)
chr5 (461-552)||(2252178-2252269)
chr5 (359-427)||(2740398-2740467)
chr5 (358-427)||(33149545-33149614)
chr5 (457-553)||(31008986-31009082)
chr5 (364-427)||(14831938-14832001)
chr5 (457-551)||(26720516-26720610)
chr5 (457-551)||(26990265-26990359)
chr5 (460-552)||(41470425-41470517)
chr5 (373-427)||(35785323-35785377)
chr5 (488-553)||(39688934-39688999)
chr5 (367-427)||(18520800-18520860)
chr5 (488-546)||(10356639-10356698)
chr5 (484-551)||(33825357-33825424)
chr5 (381-427)||(36732872-36732918)
chr5 (457-550)||(16327902-16327995)
chr5 (366-427)||(40145531-40145592)
chr5 (485-551)||(6260035-6260101)
chr5 (377-427)||(13811776-13811826)
chr5 (373-427)||(15409532-15409586)
chr5 (373-423)||(31009116-31009166)
chr5 (373-427)||(31132458-31132512)
chr5 (468-553)||(9603811-9603896)
chr5 (366-415)||(16115247-16115296)
chr5 (457-551)||(20073522-20073616)
chr5 (373-423)||(35943814-35943864)
chr5 (459-503)||(31132392-31132436)
chr5 (484-553)||(38296201-38296270)
[»] chr2 (60 HSPs)
chr2 (457-553)||(9058478-9058574)
chr2 (457-553)||(33436106-33436202)
chr2 (457-548)||(28863458-28863549)
chr2 (457-553)||(10249388-10249484)
chr2 (457-552)||(7465741-7465836)
chr2 (457-548)||(19930826-19930917)
chr2 (457-552)||(32505654-32505749)
chr2 (457-551)||(13438343-13438437)
chr2 (457-551)||(17473020-17473114)
chr2 (457-555)||(30915459-30915557)
chr2 (457-552)||(5574494-5574589)
chr2 (457-551)||(40701478-40701572)
chr2 (457-551)||(27864704-27864798)
chr2 (457-551)||(28381661-28381755)
chr2 (457-553)||(20700813-20700909)
chr2 (457-551)||(40613908-40614002)
chr2 (468-553)||(38882831-38882915)
chr2 (457-551)||(4060685-4060779)
chr2 (457-553)||(26891510-26891606)
chr2 (457-553)||(38273148-38273244)
chr2 (365-427)||(7465649-7465711)
chr2 (461-551)||(43490121-43490211)
chr2 (484-552)||(33436210-33436278)
chr2 (457-553)||(42257191-42257287)
chr2 (457-552)||(2533123-2533217)
chr2 (373-427)||(5574422-5574476)
chr2 (373-427)||(10249304-10249358)
chr2 (373-427)||(13438467-13438521)
chr2 (373-427)||(17473144-17473198)
chr2 (373-427)||(28863579-28863633)
chr2 (461-551)||(38732354-38732444)
chr2 (366-427)||(19930735-19930796)
chr2 (461-533)||(2997497-2997569)
chr2 (461-553)||(45097745-45097837)
chr2 (457-551)||(17820010-17820104)
chr2 (373-423)||(20700943-20700993)
chr2 (373-427)||(38882733-38882787)
chr2 (468-550)||(41575138-41575220)
chr2 (373-426)||(32505570-32505623)
chr2 (373-426)||(40613824-40613877)
chr2 (457-545)||(3439985-3440073)
chr2 (368-420)||(28381572-28381624)
chr2 (368-427)||(40701602-40701661)
chr2 (484-553)||(17823782-17823851)
chr2 (459-552)||(36168835-36168928)
chr2 (457-508)||(3737986-3738037)
chr2 (368-427)||(4060809-4060868)
chr2 (461-553)||(13365349-13365443)
chr2 (368-427)||(27864815-27864874)
chr2 (373-427)||(9058604-9058658)
chr2 (373-427)||(30915587-30915641)
chr2 (373-427)||(33436022-33436076)
chr2 (385-425)||(2533249-2533289)
chr2 (486-553)||(15428775-15428842)
chr2 (373-427)||(36168960-36169014)
chr2 (378-427)||(42257317-42257366)
chr2 (373-417)||(3440113-3440157)
chr2 (373-420)||(17823919-17823966)
chr2 (484-525)||(16096874-16096914)
chr2 (484-525)||(42849793-42849833)
[»] chr1 (58 HSPs)
chr1 (457-553)||(2581913-2582009)
chr1 (457-551)||(9474882-9474976)
chr1 (457-551)||(3000319-3000413)
chr1 (457-555)||(38632327-38632425)
chr1 (457-551)||(48716288-48716382)
chr1 (457-553)||(38595152-38595248)
chr1 (457-552)||(51898689-51898784)
chr1 (457-551)||(27564741-27564835)
chr1 (457-551)||(47452326-47452420)
chr1 (457-553)||(8346394-8346490)
chr1 (457-552)||(50630457-50630552)
chr1 (457-553)||(32813245-32813341)
chr1 (457-548)||(44548382-44548473)
chr1 (458-550)||(11152385-11152476)
chr1 (457-552)||(41758804-41758899)
chr1 (457-551)||(43132-43226)
chr1 (457-551)||(37649198-37649292)
chr1 (461-551)||(50591010-50591100)
chr1 (461-553)||(5959010-5959102)
chr1 (368-427)||(27564652-27564711)
chr1 (373-427)||(37649322-37649376)
chr1 (373-427)||(48716204-48716258)
chr1 (457-553)||(49811533-49811629)
chr1 (373-427)||(41758929-41758983)
chr1 (484-553)||(23597124-23597193)
chr1 (457-521)||(13414791-13414855)
chr1 (461-553)||(26274430-26274522)
chr1 (461-551)||(41608503-41608593)
chr1 (367-427)||(9474792-9474852)
chr1 (383-427)||(38632253-38632297)
chr1 (457-553)||(45044566-45044662)
chr1 (368-427)||(26274553-26274612)
chr1 (457-551)||(3302539-3302633)
chr1 (373-427)||(32813371-32813425)
chr1 (373-423)||(47452242-47452292)
chr1 (484-544)||(26440741-26440801)
chr1 (368-427)||(43256-43315)
chr1 (461-551)||(47748443-47748532)
chr1 (373-427)||(50630582-50630636)
chr1 (457-546)||(44453984-44454073)
chr1 (484-552)||(37926471-37926539)
chr1 (368-420)||(38595285-38595337)
chr1 (368-427)||(2582039-2582098)
chr1 (373-420)||(3000450-3000497)
chr1 (457-551)||(6260870-6260964)
chr1 (373-427)||(49811449-49811503)
chr1 (373-423)||(51898605-51898655)
chr1 (457-524)||(48489328-48489394)
chr1 (462-552)||(7740732-7740822)
chr1 (373-427)||(8346309-8346363)
chr1 (484-546)||(34340072-34340133)
chr1 (381-427)||(37926368-37926414)
chr1 (373-427)||(45044482-45044536)
chr1 (484-525)||(750239-750279)
chr1 (484-525)||(4401454-4401494)
chr1 (484-525)||(7447951-7447991)
chr1 (457-526)||(44334176-44334245)
chr1 (484-525)||(50448194-50448234)
[»] chr7 (62 HSPs)
chr7 (457-553)||(7389387-7389483)
chr7 (457-553)||(8080389-8080485)
chr7 (457-561)||(38837207-38837311)
chr7 (457-552)||(36361919-36362014)
chr7 (457-551)||(38267040-38267134)
chr7 (457-552)||(3434561-3434656)
chr7 (457-552)||(36362025-36362120)
chr7 (457-551)||(19329842-19329936)
chr7 (457-551)||(35137533-35137627)
chr7 (457-548)||(3783998-3784089)
chr7 (457-551)||(4999520-4999614)
chr7 (457-553)||(19436193-19436289)
chr7 (457-553)||(40957705-40957801)
chr7 (457-548)||(3694370-3694461)
chr7 (461-551)||(8238212-8238303)
chr7 (461-554)||(38044194-38044287)
chr7 (457-551)||(46374808-46374902)
chr7 (366-427)||(19329966-19330027)
chr7 (457-550)||(32951499-32951592)
chr7 (461-552)||(22343360-22343451)
chr7 (461-552)||(41915740-41915831)
chr7 (457-551)||(21234401-21234495)
chr7 (457-546)||(35522881-35522970)
chr7 (485-553)||(10343597-10343665)
chr7 (457-553)||(36208171-36208267)
chr7 (368-423)||(8080300-8080355)
chr7 (373-427)||(3434676-3434730)
chr7 (366-427)||(38837341-38837402)
chr7 (462-551)||(40846124-40846213)
chr7 (368-427)||(4999431-4999490)
chr7 (502-553)||(11044186-11044237)
chr7 (484-553)||(18207178-18207247)
chr7 (486-551)||(32564461-32564526)
chr7 (459-552)||(46033809-46033902)
chr7 (461-553)||(7727904-7727996)
chr7 (460-552)||(26296643-26296735)
chr7 (367-427)||(36362138-36362198)
chr7 (367-427)||(40957831-40957891)
chr7 (368-427)||(32951410-32951469)
chr7 (490-553)||(35468894-35468957)
chr7 (484-551)||(39255956-39256023)
chr7 (373-427)||(46374746-46374800)
chr7 (378-427)||(19436114-19436163)
chr7 (367-427)||(7389513-7389572)
chr7 (495-551)||(31735884-31735940)
chr7 (368-427)||(36361842-36361901)
chr7 (373-427)||(35523000-35523054)
chr7 (373-427)||(46033723-46033777)
chr7 (368-427)||(11044302-11044361)
chr7 (373-427)||(2318163-2318217)
chr7 (373-427)||(16374746-16374800)
chr7 (373-427)||(21234525-21234579)
chr7 (381-427)||(31736001-31736047)
chr7 (373-423)||(41423810-41423860)
chr7 (484-553)||(45223040-45223109)
chr7 (487-546)||(2318279-2318338)
chr7 (368-427)||(35137657-35137716)
chr7 (373-427)||(38044321-38044375)
chr7 (373-414)||(12311041-12311082)
chr7 (484-525)||(32029751-32029791)
chr7 (373-414)||(39255846-39255887)
chr7 (486-551)||(41423682-41423747)
[»] chr4 (56 HSPs)
chr4 (457-553)||(48183055-48183151)
chr4 (457-553)||(50052434-50052530)
chr4 (457-551)||(11511468-11511562)
chr4 (457-553)||(480453-480549)
chr4 (457-551)||(6034044-6034138)
chr4 (457-551)||(41236347-41236441)
chr4 (457-553)||(42044373-42044469)
chr4 (457-551)||(54473539-54473633)
chr4 (457-553)||(29239884-29239980)
chr4 (457-552)||(29234251-29234346)
chr4 (457-551)||(3481654-3481748)
chr4 (457-554)||(24995113-24995210)
chr4 (458-551)||(50526178-50526271)
chr4 (457-553)||(23608233-23608329)
chr4 (457-553)||(29977883-29977979)
chr4 (457-551)||(31910192-31910286)
chr4 (461-562)||(19670726-19670827)
chr4 (483-551)||(40574779-40574847)
chr4 (368-427)||(41236471-41236530)
chr4 (486-553)||(55475189-55475256)
chr4 (461-552)||(47986207-47986298)
chr4 (461-552)||(50813902-50813993)
chr4 (459-546)||(53352574-53352660)
chr4 (368-426)||(24995024-24995082)
chr4 (461-554)||(32766955-32767048)
chr4 (366-427)||(42044282-42044343)
chr4 (373-426)||(48182971-48183024)
chr4 (461-533)||(17983753-17983825)
chr4 (486-553)||(29547994-29548061)
chr4 (373-427)||(6034168-6034222)
chr4 (486-551)||(55079749-55079814)
chr4 (457-552)||(28480274-28480369)
chr4 (457-552)||(28481149-28481244)
chr4 (457-552)||(28482024-28482119)
chr4 (465-551)||(8343177-8343263)
chr4 (373-423)||(29240014-29240064)
chr4 (367-427)||(23608359-23608419)
chr4 (457-513)||(41823920-41823976)
chr4 (486-552)||(44536781-44536846)
chr4 (373-427)||(54473455-54473509)
chr4 (486-551)||(18924530-18924595)
chr4 (484-553)||(47104542-47104611)
chr4 (457-553)||(48647732-48647828)
chr4 (488-543)||(29589777-29589831)
chr4 (373-416)||(50052350-50052393)
chr4 (373-416)||(53352496-53352539)
chr4 (368-426)||(11511380-11511437)
chr4 (373-427)||(31910316-31910370)
chr4 (373-427)||(41824006-41824060)
chr4 (373-423)||(50526093-50526143)
chr4 (462-546)||(18769114-18769198)
chr4 (381-420)||(40574910-40574949)
chr4 (373-427)||(19670638-19670692)
chr4 (373-427)||(29547881-29547935)
chr4 (373-427)||(55475315-55475369)
chr4 (386-427)||(480382-480423)
[»] chr8 (55 HSPs)
chr8 (457-551)||(504127-504221)
chr8 (457-551)||(12831047-12831141)
chr8 (457-551)||(15197333-15197427)
chr8 (457-551)||(40423949-40424043)
chr8 (457-553)||(14547920-14548016)
chr8 (457-551)||(1179946-1180040)
chr8 (457-552)||(37038478-37038573)
chr8 (457-551)||(23122603-23122697)
chr8 (457-551)||(34012302-34012396)
chr8 (457-550)||(5957831-5957924)
chr8 (459-552)||(44507095-44507188)
chr8 (457-553)||(10284637-10284733)
chr8 (457-551)||(15048188-15048281)
chr8 (461-553)||(16383375-16383467)
chr8 (457-532)||(8841438-8841513)
chr8 (461-555)||(34307212-34307306)
chr8 (457-546)||(10621093-10621182)
chr8 (457-551)||(43414587-43414681)
chr8 (366-427)||(14548046-14548107)
chr8 (358-427)||(34012203-34012272)
chr8 (461-553)||(24307803-24307895)
chr8 (484-551)||(20074967-20075034)
chr8 (373-427)||(504043-504097)
chr8 (373-427)||(23122519-23122573)
chr8 (488-553)||(4854900-4854965)
chr8 (488-553)||(24307627-24307692)
chr8 (486-551)||(30479509-30479574)
chr8 (457-554)||(42221512-42221609)
chr8 (367-427)||(42710210-42710270)
chr8 (373-427)||(12831171-12831225)
chr8 (462-552)||(17443824-17443914)
chr8 (461-553)||(16056411-16056503)
chr8 (468-551)||(14055609-14055692)
chr8 (457-550)||(9122196-9122279)
chr8 (373-427)||(9122309-9122363)
chr8 (486-552)||(32032724-32032789)
chr8 (373-427)||(40423865-40423919)
chr8 (373-427)||(43414503-43414557)
chr8 (364-425)||(15197459-15197520)
chr8 (457-553)||(15258935-15259031)
chr8 (373-427)||(1179862-1179916)
chr8 (373-423)||(5957958-5958008)
chr8 (373-423)||(8841354-8841404)
chr8 (381-427)||(15048111-15048157)
chr8 (373-423)||(37038607-37038657)
chr8 (373-423)||(42354510-42354560)
chr8 (373-427)||(44507010-44507063)
chr8 (373-427)||(4854785-4854839)
chr8 (373-423)||(10284553-10284603)
chr8 (373-427)||(16056323-16056377)
chr8 (373-427)||(24307715-24307769)
chr8 (373-427)||(32707925-32707979)
chr8 (484-525)||(2547122-2547162)
chr8 (484-525)||(29705488-29705528)
chr8 (486-551)||(38229429-38229493)
[»] chr6 (37 HSPs)
chr6 (457-551)||(32869678-32869772)
chr6 (457-548)||(22880664-22880755)
chr6 (457-551)||(17598554-17598648)
chr6 (457-552)||(11427615-11427712)
chr6 (457-553)||(6209471-6209567)
chr6 (465-551)||(31109414-31109500)
chr6 (461-553)||(15990052-15990144)
chr6 (461-553)||(30341370-30341462)
chr6 (457-547)||(28536494-28536582)
chr6 (457-552)||(31976247-31976342)
chr6 (461-551)||(15508034-15508124)
chr6 (457-551)||(29857827-29857921)
chr6 (462-560)||(15832568-15832666)
chr6 (357-427)||(29857951-29858021)
chr6 (361-427)||(32869802-32869868)
chr6 (457-553)||(23128133-23128229)
chr6 (368-427)||(11427742-11427801)
chr6 (365-427)||(17598678-17598740)
chr6 (457-551)||(31953036-31953130)
chr6 (457-553)||(31110767-31110861)
chr6 (461-551)||(4231548-4231638)
chr6 (373-427)||(15832701-15832755)
chr6 (367-427)||(22880574-22880634)
chr6 (485-550)||(946377-946442)
chr6 (484-553)||(12732480-12732549)
chr6 (373-427)||(31976372-31976426)
chr6 (484-546)||(9379745-9379807)
chr6 (486-552)||(22422053-22422119)
chr6 (373-427)||(31110683-31110737)
chr6 (368-427)||(23128043-23128103)
chr6 (368-427)||(6209383-6209441)
chr6 (373-427)||(4231672-4231726)
chr6 (373-415)||(22422001-22422043)
chr6 (373-423)||(31952952-31953002)
chr6 (484-525)||(7367675-7367715)
chr6 (484-553)||(9698239-9698307)
chr6 (484-525)||(26669943-26669983)
[»] scaffold0321 (2 HSPs)
scaffold0321 (457-562)||(10115-10220)
scaffold0321 (367-427)||(10025-10085)
[»] scaffold1268 (2 HSPs)
scaffold1268 (457-551)||(935-1029)
scaffold1268 (373-423)||(851-901)
[»] scaffold1267 (2 HSPs)
scaffold1267 (457-551)||(935-1029)
scaffold1267 (373-423)||(851-901)
[»] scaffold0237 (2 HSPs)
scaffold0237 (457-551)||(4029-4123)
scaffold0237 (366-427)||(4153-4214)
[»] scaffold0018 (1 HSPs)
scaffold0018 (462-535)||(152514-152587)
[»] scaffold0316 (2 HSPs)
scaffold0316 (457-528)||(17077-17148)
scaffold0316 (373-416)||(17238-17281)
[»] scaffold0110 (1 HSPs)
scaffold0110 (373-420)||(8785-8832)
[»] scaffold0119 (1 HSPs)
scaffold0119 (484-525)||(811-851)


Alignment Details
Target: chr3 (Bit Score: 348; Significance: 0; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 5 - 368
Target Start/End: Complemental strand, 52824403 - 52824040
Alignment:
Q  5 gaggagcagagatcctacgcatgctctcgctagagaaagaaaccagaatattttcctcatgaatatgataattagcatcatcatgcactatatgattctg 104  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824403 gaggaacacagatcctacgcatgctctcgctagagaaagaaaccagaatattttcctcatgaatatgataattagcatcatcatgcactatatgattctg 52824304  T
Q  105 gtgttgtagttcatgagagggaacagaagaagaaggggaatcaaggaaatcttcaaacttccaacctgggatagtgtttatcaagtactcagatatagta 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824303 gtgttgtagttcatgagagggaacagaagaagaaggggaatcaaggaaatcttcaaacttccaacctgggatagtgtttatcaagtactcagatatagta 52824204  T
Q  205 aaattaccagtttcttcatgaagagtgggaggaggagcaggagagtgcagcttgatcccacttagaagaaacctattatgcttcttggtgtgttcgttga 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52824203 aaattaccagtttcttcatgaagagtgggaggaggagcaggagagtgcagcttgatcccacttagaagaaacctattatgcttcttggtgtgttcgttga 52824104  T
Q  305 caccatgaaccttcaaatcacactctttgcacacaatcgctctatcttcctgacaataaacaaa 368  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  52824103 caccgtgaaccttcaaatcacactctttgcacacaatcgctctatcttcctgacaaaaaacaaa 52824040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 457 - 555
Target Start/End: Original strand, 27714897 - 27714995
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 555  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  27714897 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcattactcttct 27714995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 53982105 - 53982011
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53982105 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 33644294 - 33644200
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33644294 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 31456783 - 31456690
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  31456783 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 49607508 - 49607412
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49607508 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 49607412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 457 - 546
Target Start/End: Complemental strand, 52629394 - 52629305
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52629394 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 54868901 - 54868997
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||| ||||||||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54868901 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactctt 54868997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 8076487 - 8076393
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  8076487 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 478 - 553
Target Start/End: Original strand, 11095380 - 11095455
Alignment:
Q  478 tgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11095380 tgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 11095455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 17470499 - 17470404
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  17470499 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaaggtgtctatgtatcattactct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 26141538 - 26141632
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||| ||||||||  ||||  |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  26141538 tgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 461 - 547
Target Start/End: Original strand, 48587101 - 48587187
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 547  Q
    |||||||||| ||||| ||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  48587101 cttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatgtatcatt 48587187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 472 - 553
Target Start/End: Original strand, 33118872 - 33118953
Alignment:
Q  472 tccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  33118872 tccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactctt 33118953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 466 - 553
Target Start/End: Original strand, 36707439 - 36707526
Alignment:
Q  466 gcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||| ||||| | ||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  36707439 gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaagggtatctatgtatcattactctt 36707526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 14623845 - 14623939
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||| | |||||||||||   | |||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  14623845 tgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 547
Target Start/End: Original strand, 30801739 - 30801829
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 547  Q
    |||||||||| |||||||| |||||| | ||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  30801739 tgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 457 - 546
Target Start/End: Complemental strand, 26754789 - 26754700
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    |||||||||||||||||||  ||||  | |||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  26754789 tgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 35536720 - 35536625
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||   ||||||||||||  ||||||| |||||| ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||    
T  35536720 tgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 550
Target Start/End: Original strand, 13898061 - 13898154
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    |||||||||| | |||||||||||   |||||||||||||| |||||||||||| |||||||||||||||||||| ||| ||| ||||||||||    
T  13898061 tgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 33644385 - 33644324
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33644385 aaagagtaatgatacatagacaccctttattcccatacacccttatacaccccatgcattag 33644324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 11907465 - 11907369
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||||||| |||||  | ||||||||||||||||| ||||  | | |||||||| |||||||||||||||||||||||| ||||||    
T  11907465 tgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggtgtctatgtatcataactctt 11907369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 8956856 - 8956761
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||   |||||||||||   ||||||| |||||| ||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  8956856 tgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactct 8956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 53982189 - 53982135
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  53982189 aatgatacatagacaccctttattcccatacaaccttgtacaccccatgcattag 53982135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 11347955 - 11348024
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||||||| ||||||    
T  11347955 cgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaaggatgtctatgtatcataactctt 11348024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 48587016 - 48587077
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  48587016 aaagagtaatgatacatagacaccctttattcccatatacccttgtacatcccatgcattag 48587077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 11095283 - 11095343
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  11095283 aagagtaatgatacatagacaccctttattctcatacacccttgtacacccgatgcattag 11095343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 484 - 552
Target Start/End: Original strand, 24699987 - 24700055
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||| ||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  24699987 cgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaaggatgtctatgtatcattactct 24700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 41189770 - 41189866
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||  || |  ||||||| |||||| ||||||||||||| | ||||||||||||||||| ||| |||||||||| ||||||    
T  41189770 tgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggatgtatatgtatcataactctt 41189866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 20764921 - 20765015
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||| |||||||||  || |  |||||||||||||||||||||||| |||| ||||||| |||||||||| ||||||||| |||| ||||    
T  20764921 tgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggatgtctatgtctcataactc 20765015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 31456867 - 31456813
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  31456867 aatgatacataaacaccctttattcccatgcacccttgtacaccccatgcattag 31456813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 45058563 - 45058652
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||| |||    | |||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  45058563 cttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcataactc 45058652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 47531959 - 47531865
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||| || ||| |  ||||||||||| |||||||| ||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  47531959 tgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 49607592 - 49607538
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  49607592 aatgatacatagacaccctttattcccatacacccttgtacacgtcatgcattag 49607538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 51419366 - 51419460
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||||| |  || |  |||||||||||||||||||||||| ||||| ||||||| || |||||| |||||||||||||| ||||    
T  51419366 tgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 52629485 - 52629424
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| |||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  52629485 aaagagtaatgatacatagacacccattatttccatacacccttgtacatcccatgcattag 52629424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 54868810 - 54868871
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  54868810 aaagagtaatgatacatagacaccttttatttccatacacccttgtacaccctatgcattag 54868871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 9563093 - 9562998
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||| |||||| || ||||| ||||| |||||||||||||| | ||| ||||||||| ||||||| || |||| ||||| ||||||||||||||||    
T  9563093 tgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaaaggttgtattgtcatctaatggtgtttatgtatcattactct 9562998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 11347844 - 11347898
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11347844 aatggtacatagacaccctttattcccatacacccttatacaccccatacattag 11347898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 469 - 551
Target Start/End: Complemental strand, 41080790 - 41080709
Alignment:
Q  469 gggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||  | | ||||||||||| |||||||||||||||||| |||| | |||||| |||||||||||||||||||    
T  41080790 gggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgttttgcta-ctaaggatgtctatgtatcattactc 41080709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 35965807 - 35965876
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||| ||||||||||||||| ||||||  ||| ||||| ||| |||||||||||||||||    
T  35965807 cgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactctt 35965876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 461 - 529
Target Start/End: Original strand, 36331339 - 36331407
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaa 529  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| ||||| ||||||||||||    
T  36331339 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 489 - 552
Target Start/End: Original strand, 36331416 - 36331479
Alignment:
Q  489 cagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||||||| |||||| ||||| ||||||| |||||||||| |||||||||| |||||    
T  36331416 cagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataactct 36331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 9563177 - 9563123
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||| |||||||||||||||||||| ||||||| | ||||||||||    
T  9563177 aatgatacatagataccctttattcccatacacctttgtacaactcatgcattag 9563123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 20764837 - 20764891
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  20764837 aatgttacatagacaccatttattctcatacacccttgtacaccccatacattag 20764891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 26141452 - 26141506
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||| ||||||    
T  26141452 aatgttacatagacaccctttatttccatacactcttgtacaccccatacattag 26141506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 33118772 - 33118822
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||||||||    
T  33118772 aatgttacgtagacaccctttatttccatacacccttgtacaccccatgca 33118822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 36707350 - 36707404
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||    
T  36707350 aatgatacatagacaccttttattcccatacattcttgtacacctcatgcattag 36707404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 465 - 546
Target Start/End: Complemental strand, 42823197 - 42823116
Alignment:
Q  465 tgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    ||||||||||| |||||  | ||||| |||||| |||||||||||| ||||||||| |||| ||| ||||| ||||||||||    
T  42823197 tgcggggtccatatgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcat 42823116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 30801655 - 30801703
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatg 421  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  30801655 aatgttacatagacaccttttattctcatacacccttgtacaccccatg 30801703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 484 - 552
Target Start/End: Original strand, 21746214 - 21746284
Alignment:
Q  484 cgtgtcagatttttgtgtggg--tgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||||||||  |||| | |  ||||||||||||||||| ||| ||||||||||||||||    
T  21746214 cgtgtcagatttttgtgtgggggtgtccaggaatgtattgccacctaaggatgtatatgtatcattactct 21746284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 48375712 - 48375807
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||||||  ||||  |  ||||||||||||| ||| | |  | |||||||||| |||||||||||||||||| ||||| |||||    
T  48375712 tgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaagggtgtctatgaatcataactct 48375807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 553
Target Start/End: Original strand, 1758491 - 1758560
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaa--agggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||||||||   ||||||||||| ||||| || || ||||||||||| ||||||    
T  1758491 tgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatggttgactatgtatcataactctt 1758560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 35093679 - 35093581
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 555  Q
    |||||||||  || || ||||||||  | ||||||||||||| |||| ||||||| | ||||||| ||||||| | |||||||||||| | ||||||||    
T  35093679 tgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattgtcacctaaagttgtctatgtatcgtaactcttct 35093581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 35536804 - 35536754
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  35536804 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 35536754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 41189686 - 41189740
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||||||||| |||||||| ||||||||| |||| ||||||    
T  41189686 aatgttacatagacaccctttatttccatacactcttgtacactccatacattag 41189740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 51419282 - 51419336
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||| ||||| |||||| ||||||||||||||||||||||| ||||||    
T  51419282 aatgttacataaacaccttttatttccatacacccttgtacaccccatacattag 51419336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 548
Target Start/End: Original strand, 25407180 - 25407245
Alignment:
Q  484 cgtgtcagattttt-gtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 548  Q
    |||||||||||||| ||||| ||||||| |||| |||||||||||| || ||| ||||||||||||    
T  25407180 cgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatggttgtgtatgtatcatta 25407245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 35965704 - 35965757
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 426  Q
    |||| |||||||||||| ||||||| |||||||||||||||||| |||| ||||    
T  35965704 aatgttacatagacaccttttattctcatacacccttgtacacctcatgaatta 35965757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 27714825 - 27714873
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatg 421  Q
    ||||||||||| |||| |||||||| | |||||||||||||||||||||    
T  27714825 aatgatacatatacactctttattctcgtacacccttgtacaccccatg 27714873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 17470588 - 17470529
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||||||| ||||||| ||||||   ||||||| ||||||||||||    
T  17470588 agagtaatgatacatagacaccatttattctcatacatatttgtacatcccatgcattag 17470529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 8076571 - 8076521
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||| ||||||| |||||||  ||||||||||||||||    
T  8076571 aatgttacatagacaccatttattctcatacacttttgtacaccccatgca 8076521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 47532043 - 47531989
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||| ||||||||||||||||||||| ||||||||  |||| ||||||    
T  47532043 aatgttacataaacaccctttattcccatacacacttgtacattccatacattag 47531989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 52629954 - 52629994
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  52629954 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 52629994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Complemental strand, 53581832 - 53581792
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  53581832 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 53581792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 457 - 659
Target Start/End: Original strand, 36732948 - 36733150
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctg 556  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  36732948 tgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactcttctg 36733047  T
Q  557 aaaaaccttactatgagatttaacatctaaattattgaatatcttggaaacattataggattacaaaaatattttaaggaatctctcggaacaagaccaa 656  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36733048 aaaaaccttactatgagatttaacatctaaattattgaatatcttggaaacattataggattacaaaaatattttaaggaatctctcggaacaagaccaa 36733147  T
Q  657 tgg 659  Q
    |||    
T  36733148 tgg 36733150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 18520890 - 18520986
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18520890 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattattctt 18520986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 42414308 - 42414402
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  42414308 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 2740368 - 2740273
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2740368 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 40145501 - 40145407
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  40145501 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 13811746 - 13811650
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||    
T  13811746 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatctttactctt 13811650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 14831908 - 14831814
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  14831908 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 33149644 - 33149738
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  33149644 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 35785293 - 35785199
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35785293 tgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 28177869 - 28177775
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||| ||||||||||||||  ||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  28177869 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 35943898 - 35943992
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||| ||| ||||| | ||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  35943898 tgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 461 - 553
Target Start/End: Original strand, 3921275 - 3921367
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  3921275 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 3921367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 15409616 - 15409712
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||  || || |||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||||||| ||||||    
T  15409616 tgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaaggatgtctatgtatcataactctt 15409712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 6679792 - 6679697
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||| ||||||||||||||  ||||  |||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| |||||    
T  6679792 tgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaagatgtctatgtatcataactct 6679697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  492 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 2252178 - 2252269
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| |||||    
T  2252178 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactct 2252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 2740467 - 2740398
Alignment:
Q  359 aataaaca-aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2740467 aataaacagaagagtaatgatacatagacaccctttattcccatacacccttgtacatcccatgcattag 2740398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 33149545 - 33149614
Alignment:
Q  358 caataaacaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  33149545 caataaaaaaagagtaatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattag 33149614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 31009082 - 31008986
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||||  |||  ||||||| ||||||||| ||| |||||||||| ||||||    
T  31009082 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaaggatgtttatgtatcataactctt 31008986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 364 - 427
Target Start/End: Complemental strand, 14832001 - 14831938
Alignment:
Q  364 acaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14832001 acaacgagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 14831938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 26720610 - 26720516
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||  || |  |||||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  26720610 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 26990359 - 26990265
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||  || |  |||||||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  26990359 tgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 552
Target Start/End: Original strand, 41470425 - 41470517
Alignment:
Q  460 gcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||||||||| ||||| |||||||||||||| | ||  | | ||||| ||||||||||||||| ||||||||||||| ||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagatttttatatgaattttaaaggatgtattgccacctaaaggtgtctatgtattattactct 41470517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 35785377 - 35785323
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattag 35785323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 39688934 - 39688999
Alignment:
Q  488 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||||||||||| || ||||||||||| ||||||||| |||||||||| ||||||    
T  39688934 tcagatttttgtgtgggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactctt 39688999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 18520800 - 18520860
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  18520800 aagagtaatgatacatagacaccctttattttcatacacccttgtacacctcatgcattag 18520860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 488 - 546
Target Start/End: Complemental strand, 10356698 - 10356639
Alignment:
Q  488 tcagatttttgtgtgggtgtcaaaggg-tgtattgccacctaagggtgtctatgtatcat 546  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 33825357 - 33825424
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| |||||||||||| | |||||||||||||||||  |||||||| ||||||||||    
T  33825357 cgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 381 - 427
Target Start/End: Original strand, 36732872 - 36732918
Alignment:
Q  381 atagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  36732872 atagacaccctttattcccatacacccttgtacacctcatgcattag 36732918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 16327995 - 16327902
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    |||||||||| | ||| |||||||   |||||||||||||| |||||||||||| || ||||||||||||||||| | | ||| ||||||||||    
T  16327995 tgtgcttgtgtgaggtgcacatgaacacgtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcattact 16327902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 40145592 - 40145531
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||||| | ||||||||    
T  40145592 aaagagtaatgatacatagacaccctttattctcatatacccttgtacacctcgtgcattag 40145531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 485 - 551
Target Start/End: Original strand, 6260035 - 6260101
Alignment:
Q  485 gtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||| ||||||||| |||||||| ||||||||||||| |||||| || ||| |||||||||||||||    
T  6260035 gtgttagatttttgcgtgggtgttaaagggtgtattgtcacctatggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 377 - 427
Target Start/End: Complemental strand, 13811826 - 13811776
Alignment:
Q  377 atacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||||||||||    
T  13811826 atacatagacaccatttattcccatacatccttgtacatcccatgcattag 13811776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 15409532 - 15409586
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||| ||||||||||||| |||||||||||||||||||||| ||||||    
T  15409532 aatgttacataaacaccctttattcgcatacacccttgtacaccccatacattag 15409586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 31009166 - 31009116
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  31009166 aatgttacatagacaccctttattctcatacacctttgtacaccccatgca 31009116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 31132512 - 31132458
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||| ||||||||||||  |||||||||||||||||| ||||||||||    
T  31132512 aatgatacataaacaccctttattttcatacacccttgtacacctcatgcattag 31132458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 468 - 553
Target Start/End: Complemental strand, 9603896 - 9603811
Alignment:
Q  468 ggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||| |||||   ||||||||||||||||| ||||| || | |||||||  ||||||||| ||| |||||||||||||||||    
T  9603896 ggggtccatatgaccatgtgtcagatttttgtgtaggtgtgaatgagtgtattatcacctaaggatgtatatgtatcattactctt 9603811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 415
Target Start/End: Original strand, 16115247 - 16115296
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacac 415  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||    
T  16115247 aaagagtaatgatacatagacaccctttattctcatacactcttgtacac 16115296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 20073522 - 20073616
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||| |||||||| ||    ||||  |||||||| |||| |||||||||||||||||| || |||| | ||||||| |||||||||||    
T  20073522 tgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 35943814 - 35943864
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||  |||||| ||||||||||||||||||||||||||    
T  35943814 aatgttacatagacacattttatttccatacacccttgtacaccccatgca 35943864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 503
Target Start/End: Complemental strand, 31132436 - 31132392
Alignment:
Q  459 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgg 503  Q
    |||||||||||||||||| ||||| | ||||||||||||||||||    
T  31132436 tgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 38296270 - 38296201
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||| ||||||||||||||| | ||  ||||||||| ||||||||   ||||||||||||| ||||||    
T  38296270 cgtgtctgatttttgtgtgggtattaagaggtgtattgacacctaagatagtctatgtatcataactctt 38296201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 6e-45; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 9058574 - 9058478
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9058574 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 9058478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 33436106 - 33436202
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33436106 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 33436202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 457 - 548
Target Start/End: Complemental strand, 28863549 - 28863458
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 548  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28863549 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 10249388 - 10249484
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  10249388 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactctt 10249484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 7465741 - 7465836
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7465741 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 457 - 548
Target Start/End: Original strand, 19930826 - 19930917
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 548  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19930826 tgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 32505654 - 32505749
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  32505654 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 13438437 - 13438343
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  13438437 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 17473114 - 17473020
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  17473114 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 30915557 - 30915459
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 555  Q
    ||||||||| |||||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30915557 tgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 30915459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 5574494 - 5574589
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  5574494 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactct 5574589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 40701572 - 40701478
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||| ||||||||||||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40701572 tgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 27864798 - 27864704
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||| |||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  27864798 tgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 28381661 - 28381755
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||| |||||  ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  28381661 tgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaagggtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 20700909 - 20700813
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||    
T  20700909 tgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataaggatgtctatgtatcattactctt 20700813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 40613908 - 40614002
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||  || |  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  40613908 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 468 - 553
Target Start/End: Original strand, 38882831 - 38882915
Alignment:
Q  468 ggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||| ||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38882831 ggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcattactctt 38882915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 4060779 - 4060685
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||| |||||| ||||| | ||| |||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||    
T  4060779 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 26891510 - 26891606
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||| || ||||||| ||||  | ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||||||    
T  26891510 tgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaagggtggctatgtatcataactctt 26891606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 38273148 - 38273244
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||| ||||||||||||  || || |||||||||||||||||||||||| |||||||||||||||| |||||  |||||||||||||| ||||||    
T  38273148 tgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatgtatcataactctt 38273244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 365 - 427
Target Start/End: Original strand, 7465649 - 7465711
Alignment:
Q  365 caaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7465649 caaagagtaatgatacatagacaccctttattcccatacacccttgtacacctcatgcattag 7465711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 43490211 - 43490121
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||| ||||    
T  43490211 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 484 - 552
Target Start/End: Complemental strand, 33436278 - 33436210
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  33436278 cgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaaggatgtctatgtatcattactct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 42257287 - 42257191
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||  || |  |||||||||||||| ||||||||||||| | ||||||||||||||| | |||||||||||||| ||||||    
T  42257287 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagatgtctatgtatcataactctt 42257191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 2533217 - 2533123
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||||||||| |  || || |||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||| |||||    
T  2533217 tgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaaggatgtctatgtatcataactct 2533123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 5574422 - 5574476
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5574422 aatgatacatagacaccctttattcccatacacccttgtacacgccatgcattag 5574476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 10249304 - 10249358
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 10249358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 13438521 - 13438467
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13438521 aatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 13438467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 17473198 - 17473144
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  17473198 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattag 17473144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 28863633 - 28863579
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  28863633 aatgatacatagacaccctttattcccatacacccttgtacacctcatgcattag 28863579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 38732444 - 38732354
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||| |||||  | ||||||||||||||||||||||||| || ||||||| ||| ||||||||| |||||||||| ||||    
T  38732444 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 19930735 - 19930796
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  19930735 aaagagtaatgatacatagacaccttttattcccatacacccttgtacacctcatgcattag 19930796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 533
Target Start/End: Original strand, 2997497 - 2997569
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggt 533  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2997497 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 553
Target Start/End: Original strand, 45097745 - 45097837
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||| ||| |  | |||||||||||||| |||||||||| || ||||||||||||||||| ||| |||||||||| ||||||    
T  45097745 cttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactctt 45097837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 17820010 - 17820104
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||| ||||| ||||||||| | ||  | ||||||||||||||||||||||||| |||||||||||||||||  | |||||||||||||| ||||    
T  17820010 tgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 20700993 - 20700943
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20700993 aatgttacatagacaccctttattcccatacacccttgtacaccccatgca 20700943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 38882733 - 38882787
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  38882733 aatgatacatagagaccatttattcccatacacccttgtacaccccatgcattag 38882787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 468 - 550
Target Start/End: Complemental strand, 41575220 - 41575138
Alignment:
Q  468 ggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    ||||||||||||||  | ||||| |||||||||||  |||||||||||||||| ||| |||||| ||||||||||||||||||    
T  41575220 ggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 32505570 - 32505623
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 426  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  32505570 aatgatacatagacactctttattctcatacacccttgtacaccccatgcatta 32505623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 40613824 - 40613877
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 426  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  40613824 aatgttacatagacaccctttattcccatacacccttgtacaccccatacatta 40613877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 545
Target Start/End: Complemental strand, 3440073 - 3439985
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatca 545  Q
    |||||||||||||||||||| | |   | ||| ||||||||||||||||||| | | ||||||||||||||||||||||||| ||||||    
T  3440073 tgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaagggtgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 420
Target Start/End: Original strand, 28381572 - 28381624
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccat 420  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  28381572 agagtaatgatacatagacaccctttattcccatacatccttgtacaccccat 28381624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 40701661 - 40701602
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  40701661 agagtaatgatacatagacaccttttatttccatacacccttgtacacccgatgcattag 40701602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 17823851 - 17823782
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||||||||||||  | |  ||||||||||||||||| ||| |||||||||||||||||    
T  17823851 cgtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactctt 17823782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 552
Target Start/End: Complemental strand, 36168928 - 36168835
Alignment:
Q  459 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||||  || |  ||||||| ||||||||||||| || ||||| ||||||| || |||||| |||||||||||||| |||||    
T  36168928 tgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatgtatcataactct 36168835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 457 - 508
Target Start/End: Complemental strand, 3738037 - 3737986
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtc 508  Q
    |||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  3738037 tgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 4060868 - 4060809
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||    
T  4060868 agagtaatgatacataaacatcttttatttccatacacccttgtacaccccatgcattag 4060809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 553
Target Start/End: Complemental strand, 13365443 - 13365349
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagg--gtgtctatgtatcattactctt 553  Q
    ||||||||||||||| |||    | ||||||||||||||||||||||||| |||| |||||||| ||||||  |||| |||||||||| ||||||    
T  13365443 cttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagggtgtgtttatgtatcataactctt 13365349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 27864874 - 27864815
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||| |||||||||||||| |||||||||||||||| |||||| |||||    
T  27864874 agagtaatgatacattgacaccctttattctcatacacccttgtacatcccatgtattag 27864815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 9058658 - 9058604
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||| ||| | ||||||||||||||||||| |||||||||||||||||||||    
T  9058658 aatgatatataaataccctttattcccatacactcttgtacaccccatgcattag 9058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 30915641 - 30915587
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||||| |||||    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattag 30915587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 33436022 - 33436076
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| |||||||||| ||||||| |||||||||||||||||| ||||||||||    
T  33436022 aatgatgcatagacaccttttattctcatacacccttgtacacctcatgcattag 33436076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 385 - 425
Target Start/End: Complemental strand, 2533289 - 2533249
Alignment:
Q  385 acaccctttattcccatacacccttgtacaccccatgcatt 425  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  2533289 acaccctttattcccatacacccttgtacaccccatacatt 2533249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 486 - 553
Target Start/End: Original strand, 15428775 - 15428842
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||||| |||| || |||||||| ||||| ||||| ||| |||||||||| ||||||    
T  15428775 tgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactctt 15428842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 36169014 - 36168960
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||| ||||||||||||| ||||||| |||||||||||||| ||||||    
T  36169014 aatgttacataaacaccctttattctcatacactcttgtacaccccatacattag 36168960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 378 - 427
Target Start/End: Complemental strand, 42257366 - 42257317
Alignment:
Q  378 tacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||||| | |||||| |||||||||||||| ||||||    
T  42257366 tacatagacaccctttatttctatacactcttgtacaccccatacattag 42257317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 417
Target Start/End: Complemental strand, 3440157 - 3440113
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccc 417  Q
    |||| ||||||||||||||||||| ||||||||| ||||||||||    
T  3440157 aatgttacatagacaccctttatttccatacacctttgtacaccc 3440113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 420
Target Start/End: Complemental strand, 17823966 - 17823919
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccat 420  Q
    |||| |||||||||| ||||||||  ||||||||||||||||||||||    
T  17823966 aatgttacatagacatcctttatttacatacacccttgtacaccccat 17823919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 16096874 - 16096914
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  16096874 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 16096914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Complemental strand, 42849833 - 42849793
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  42849833 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 42849793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 2e-42; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 2582009 - 2581913
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2582009 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 2581913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 9474882 - 9474976
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9474882 tgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 3000413 - 3000319
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3000413 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 555
Target Start/End: Original strand, 38632327 - 38632425
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 555  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  38632327 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaagggtgtctatgtatcattactcttct 38632425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 48716288 - 48716382
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  48716288 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 38595248 - 38595152
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  38595248 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactctt 38595152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 51898689 - 51898784
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  51898689 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 27564741 - 27564835
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  27564741 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 47452326 - 47452420
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47452326 tgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 8346394 - 8346490
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  8346394 tgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtgactatgtatcattactctt 8346490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 50630552 - 50630457
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||||||||    
T  50630552 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaagggtatctatgtatcattactct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 32813341 - 32813245
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||  ||||  |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||    
T  32813341 tgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactctt 32813245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 457 - 548
Target Start/End: Original strand, 44548382 - 44548473
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 548  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||| ||||||||||||||||| | ||||||||||||||||    
T  44548382 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 458 - 550
Target Start/End: Original strand, 11152385 - 11152476
Alignment:
Q  458 gtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    |||||||||||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||||    
T  11152385 gtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaa-ggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 41758899 - 41758804
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||| ||||||||||||||  ||||| |||||||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||||||||||    
T  41758899 tgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatggtgtctatgtatcattactct 41758804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 43226 - 43132
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||| ||||||| | ||||||  |||||||||||||||||||    
T  43226 tgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 37649292 - 37649198
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||  | ||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||||    
T  37649292 tgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 50591010 - 50591100
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  50591010 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 461 - 553
Target Start/End: Original strand, 5959010 - 5959102
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||| |||||  | |||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||||| ||||||    
T  5959010 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaagggtgtttatgtatcataactctt 5959102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 27564652 - 27564711
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27564652 agagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 27564711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 37649376 - 37649322
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 37649322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 48716204 - 48716258
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 48716258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 49811533 - 49811629
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||| ||| | ||| || |||||||||||||||||||| ||||||| ||||||||| ||||||||| ||||||| |||||| ||||||    
T  49811533 tgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaaggatgtctatctatcataactctt 49811629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 41758983 - 41758929
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 41758929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 23597124 - 23597193
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||| | |||||||||||||||||||||    
T  23597124 cgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatgtatcattactctt 23597193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 521
Target Start/End: Complemental strand, 13414855 - 13414791
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattg 521  Q
    |||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  13414855 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 553
Target Start/End: Complemental strand, 26274522 - 26274430
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||| || ||||| |||||  ||||||||||||| ||||| ||||||| | ||||||||||| |||||||||||||||||||||| ||||    
T  26274522 cttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatgtatcattattctt 26274430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 41608503 - 41608593
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||| ||||||||| ||| |  | ||||||||||||||||| ||||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  41608503 cttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 9474792 - 9474852
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||    
T  9474792 aagagtaatgatacatagacactctttattctcatacacccttgtacatcccatgcattag 9474852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 38632253 - 38632297
Alignment:
Q  383 agacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  38632253 agacaccctttattcccatacacccttgtacaccccatgcattag 38632297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 45044566 - 45044662
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||| ||||||||||||||  || || | |||||||||||||| ||||||||||| |||||||||||||||||||   | |||||||||| ||||||    
T  45044566 tgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaaggaaatgtatgtatcataactctt 45044662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 26274612 - 26274553
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || | ||||||||||    
T  26274612 agagtaatgatacatagacaccctttattcccatacacccttgtgcatctcatgcattag 26274553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 3302539 - 3302633
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||  |||||||| |||| | ||||||||||||||||||||||||| | |  | ||||| ||||||||| ||| |||||||||||||||    
T  3302539 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcattactc 3302633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 32813425 - 32813371
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  32813425 aatgttacatagacaccatttattcccatacacccttgtacaccccatacattag 32813371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 47452242 - 47452292
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  47452242 aatgatacatagacactctttattcccatacatccttgtacaccccatgca 47452292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 26440801 - 26440741
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 544  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||| ||||||| ||||    
T  26440801 cgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatctatc 26440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 43315 - 43256
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||| |||||||||||  |||||| |||||||||||||||||||||    
T  43315 agagtaatgatacatagataccctttattcttatacactcttgtacaccccatgcattag 43256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 47748532 - 47748443
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||| |||| ||| |  | |||||||||||| | |||||||||| |||||||||||||||||||||| | |||||||||| ||||    
T  47748532 cttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaa-gggtgtattgccacctaagggtatttatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 50630636 - 50630582
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| |||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  50630636 aatgatgcatagacaccatttattctcatacacccttgtacaccctatgcattag 50630582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 546
Target Start/End: Complemental strand, 44454073 - 44453984
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    |||||||||| ||| ||||| | ||  | |||||||||||||||||||| ||||  | ||||||||||| ||| ||||||||||||||||    
T  44454073 tgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 484 - 552
Target Start/End: Original strand, 37926471 - 37926539
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||| ||||||||| ||| | ||||||||||||||| | | |||||||||||| |||||    
T  37926471 cgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaagatatctatgtatcataactct 37926539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 368 - 420
Target Start/End: Complemental strand, 38595337 - 38595285
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccat 420  Q
    |||| ||||||||||||||| || ||||| |||||||||||||||||||||||    
T  38595337 agagtaatgatacatagacatccattatttccatacacccttgtacaccccat 38595285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 2582098 - 2582039
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||| |||||||||||||  ||||||||||||||||| |||| |||||    
T  2582098 agagtaatgatacataaacaccctttattctaatacacccttgtacacctcatgtattag 2582039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 373 - 420
Target Start/End: Complemental strand, 3000497 - 3000450
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccat 420  Q
    ||||||||||||||| || ||||| |||||||||||||||||||||||    
T  3000497 aatgatacatagacatccattatttccatacacccttgtacaccccat 3000450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 6260964 - 6260870
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||| |||||||||||| ||||  | ||| |||||||| |||||||||  | ||||||||| |||||||||| | ||||| |||||| ||||    
T  6260964 tgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaaggatatctatctatcataactc 6260870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 49811449 - 49811503
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||||||||||| ||||||||||||| |||| ||| ||||||    
T  49811449 aatgttacatagacaccctttattctcatacacccttgtgcaccacatacattag 49811503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 51898605 - 51898655
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||| |||||||||||| | ||||||||||||||||||||||||    
T  51898605 aatgttacataaacaccctttatttctatacacccttgtacaccccatgca 51898655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 524
Target Start/End: Complemental strand, 48489394 - 48489328
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgcca 524  Q
    |||||||||||||| ||||| ||||  | |||||||||||||||||| ||||  ||||||||||||||    
T  48489394 tgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc-cagggtgtattgcca 48489328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 552
Target Start/End: Complemental strand, 7740822 - 7740732
Alignment:
Q  462 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||| |||||||||||  |  ||||||| |||||| ||| |||||||| || ||||||| ||| ||||| |||| ||||||||| |||||    
T  7740822 ttgtgtggggtccacatagccacgtgtcatatttttatgtaggtgtcaatggatgtattgtcacataaggttgtcaatgtatcataactct 7740732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 8346309 - 8346363
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||| | ||| ||||||| |||||||| |||||||| |||||||||||    
T  8346309 aatgatacataaataccatttattctcatacacctttgtacactccatgcattag 8346363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 484 - 546
Target Start/End: Original strand, 34340072 - 34340133
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    ||||||||||||||||||||   ||||  |||||||| ||||||||| |||||||||||||||    
T  34340072 cgtgtcagatttttgtgtggca-tcaacaggtgtattaccacctaagagtgtctatgtatcat 34340133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 381 - 427
Target Start/End: Original strand, 37926368 - 37926414
Alignment:
Q  381 atagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||| ||||||| |||||| ||||||||||||||| ||||||    
T  37926368 atagacaccatttattcacatacatccttgtacaccccatacattag 37926414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 45044482 - 45044536
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||| |||||| | ||||||| |||||||||||||||||||||| ||||||    
T  45044482 aatgttacgtagacatcatttattctcatacacccttgtacaccccatacattag 45044536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Complemental strand, 750279 - 750239
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  750279 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 750239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 4401454 - 4401494
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  4401454 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 4401494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 7447951 - 7447991
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  7447951 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7447991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 457 - 526
Target Start/End: Original strand, 44334176 - 44334245
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacc 526  Q
    |||| |||||| |||||||  ||||| |||||||| ||||||||||| |||||| | ||||||| |||||    
T  44334176 tgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtggatgtcaatgtgtgtattaccacc 44334245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Complemental strand, 50448234 - 50448194
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  50448234 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 50448194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 4e-40; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 7389483 - 7389387
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  7389483 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactctt 7389387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 8080389 - 8080485
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8080389 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 8080485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 457 - 561
Target Start/End: Complemental strand, 38837311 - 38837207
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctg 556  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||||||||||| ||    
T  38837311 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaagggtgtctatgtatcattactcttttg 38837212  T
Q  557 aaaaa 561  Q
    |||||    
T  38837211 aaaaa 38837207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 36361919 - 36362014
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36361919 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 38267134 - 38267040
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  38267134 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 3434656 - 3434561
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3434656 tgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 36362120 - 36362025
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  36362120 tgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 19329936 - 19329842
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  19329936 tgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 35137627 - 35137533
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||| ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35137627 tgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 457 - 548
Target Start/End: Complemental strand, 3784089 - 3783998
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 548  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  3784089 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 4999520 - 4999614
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||| ||||||||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  4999520 tgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 19436193 - 19436289
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||| |||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  19436193 tgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgtatcattactctt 19436289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 40957801 - 40957705
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||| |||| ||||| ||||| |||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||    
T  40957801 tgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagagtgtctatgtatcattactctt 40957705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 457 - 548
Target Start/End: Complemental strand, 3694461 - 3694370
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 548  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||||| ||| ||||||||    
T  3694461 tgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaagggtgtgtatatatcatta 3694370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 8238303 - 8238212
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta-agggtgtctatgtatcattactc 551  Q
    ||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||    
T  8238303 cttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagggtgtttatgtatcataactc 8238212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 461 - 554
Target Start/End: Complemental strand, 38044287 - 38044194
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttc 554  Q
    ||||||||||||||| ||| || | |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||| |||||||    
T  38044287 cttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttc 38044194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||  || |  |||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| ||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 19330027 - 19329966
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19330027 aaagagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 19329966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 457 - 550
Target Start/End: Original strand, 32951499 - 32951592
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||| ||| ||||| ||||||| || ||||| |||||||||||||||||||    
T  32951499 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagagtgtctatgtatcattact 32951592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 461 - 552
Target Start/End: Complemental strand, 22343451 - 22343360
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||||||| |||    | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  22343451 cttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 22343360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 461 - 552
Target Start/End: Complemental strand, 41915831 - 41915740
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||||||| ||| |  | |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  41915831 cttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactct 41915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 21234495 - 21234401
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||| ||  || || ||||||| ||||||||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  21234495 tgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataactc 21234401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 457 - 546
Target Start/End: Complemental strand, 35522970 - 35522881
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    |||||||||||||| |||| ||| |  |||||||||||||||||||||||| ||| ||||||||||||| ||||| ||||||||||||||    
T  35522970 tgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 485 - 553
Target Start/End: Original strand, 10343597 - 10343665
Alignment:
Q  485 gtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactctt 10343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 36208267 - 36208171
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||| |||||||| ||||  | |||||| |||||||||||||||||| |  |||||| ||||||||||||||||||||||||| ||||||    
T  36208267 tgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactctt 36208171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 368 - 423
Target Start/End: Original strand, 8080300 - 8080355
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8080300 agagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgca 8080355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 3434730 - 3434676
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3434730 aatgatacatagacaccctttattcccatacagccttgtacaccccatgcattag 3434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 38837402 - 38837341
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  38837402 aaagagtaatgatacatagacaccctttatttccatacacccttgtacatcccatgcattag 38837341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 551
Target Start/End: Original strand, 40846124 - 40846213
Alignment:
Q  462 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| || ||| | ||| |||||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| ||||    
T  40846124 ttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 4999431 - 4999490
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  4999431 agagtaatgatacatagacaccttttattctcatacacccttgtacaccccatgcattag 4999490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 502 - 553
Target Start/End: Complemental strand, 11044237 - 11044186
Alignment:
Q  502 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11044237 gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactctt 11044186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 18207247 - 18207178
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||| |||||||||| ||||||||||  ||||||||||||||||||| |||||||||||||| ||||||    
T  18207247 cgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactctt 18207178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 32564461 - 32564526
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  ||| |||||||||| ||||    
T  32564461 tgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 459 - 552
Target Start/End: Original strand, 46033809 - 46033902
Alignment:
Q  459 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||| || ||  ||||  |||||||||||||| ||||||||| ||||||||||||||||||||||  | |||||||||||| |||||    
T  46033809 tgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaatatctatgtatcataactct 46033902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 553
Target Start/End: Complemental strand, 7727996 - 7727904
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||| |||||  | |||||||||||| ||||  ||||||  |||||||| |||||||||||||| |||||||||| ||||||    
T  7727996 cttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaagggtgtttatgtatcataactctt 7727904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 552
Target Start/End: Complemental strand, 26296735 - 26296643
Alignment:
Q  460 gcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||| ||| |  ||| |||||||||| ||||| ||| ||||||| ||||| ||||||||| |||||||||||||| |||||    
T  26296735 gcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaaggatgtctatgtatcataactct 26296643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 36362198 - 36362138
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |||||    
T  36362198 aagagtaatgatacatagacaccctttattctcatacacccttgtacatcccatgtattag 36362138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 40957891 - 40957831
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| |||||||||||||||||| |||||  |||||||||||||||||||||||||||||    
T  40957891 aagagtaatgatacatagacacccattattttcatacacccttgtacaccccatgcattag 40957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 32951410 - 32951469
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||    
T  32951410 agagtaatgatacatagacaccccttattctcatacacccttgtacaccccatgtattag 32951469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 490 - 553
Target Start/End: Original strand, 35468894 - 35468957
Alignment:
Q  490 agatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||| ||||||||||||| | |||||||||| |||||| |||||||||||||||||||||    
T  35468894 agatttttatgtgggtgtcaaatgatgtattgccatctaaggatgtctatgtatcattactctt 35468957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 39255956 - 39256023
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||| ||||| ||||  ||||||||||||||||||| |||||||||||||| ||||    
T  39255956 cgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 46374746 - 46374800
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  46374746 aatgttacatagacaccatttattcccatacacccttgtacaccccatacattag 46374800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 19436114 - 19436163
Alignment:
Q  378 tacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattag 19436163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 7389572 - 7389513
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  7389572 aagagtaatgatacatagacatcctttattcccatacaccc-tgtacaccccatgtattag 7389513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 495 - 551
Target Start/End: Complemental strand, 31735940 - 31735884
Alignment:
Q  495 tttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||    
T  31735940 tttgtgtgggtgttaaagagtgtattgccacctaaggatgtctatgtatcataactc 31735884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 36361842 - 36361901
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||  ||||| |||||    
T  36361842 agagtaatgatacatagacaccctttattctcatacacccttgtacattccatgtattag 36361901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 35523054 - 35523000
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||| ||||| |||||||||||||||||||||||||||||| ||||||    
T  35523054 aatgttacataaacaccatttattcccatacacccttgtacaccccatacattag 35523000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 46033723 - 46033777
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  46033723 aatgttacatagacaccatttattctcatacacccttgtacaccccatacattag 46033777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 11044361 - 11044302
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||||||| |||||||  |||||||| ||||||||| ||||||||||    
T  11044361 agagtaatgatacatagacactctttattttcatacacctttgtacacctcatgcattag 11044302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 2318163 - 2318217
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||| ||||||| ||||||||| |||||||| |||||||||||    
T  2318163 aatgttacatagacacactttatttccatacacctttgtacactccatgcattag 2318217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 16374746 - 16374800
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||||||||||| |||||||| |||||||| |||| ||||||    
T  16374746 aatgttacatagacaccctttattctcatacacctttgtacactccatacattag 16374800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 21234579 - 21234525
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| ||||||| |||||||| ||||||||||||| ||||||    
T  21234579 aatgttacatagacaccttttattctcatacaccattgtacaccccatacattag 21234525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 427
Target Start/End: Complemental strand, 31736047 - 31736001
Alignment:
Q  381 atagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  31736047 atagataccttttattcccatacacccttgtacaccccatacattag 31736001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 41423860 - 41423810
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||| ||||||||||||| |||||||| ||||||||||||||||    
T  41423860 aatgttacataaacaccctttattctcatacacctttgtacaccccatgca 41423810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 45223109 - 45223040
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||| | |||  |||  ||||||||||||||||| ||| ||| |||||||||||||    
T  45223109 cgtgtcagatttttgtgtagatgttcaagaatgtattgccacctaaggatgtatatatatcattactctt 45223040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 546
Target Start/End: Original strand, 2318279 - 2318338
Alignment:
Q  487 gtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    ||||||||||||||||||||||||  ||||| |||||||||| || |||  |||||||||    
T  2318279 gtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggttgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 35137716 - 35137657
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||| |||||| ||| ||| ||| |||||||||||||||| ||||||||||||    
T  35137716 agagtaatgatccatagataccatttgttctcatacacccttgtacatcccatgcattag 35137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 38044375 - 38044321
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  38044375 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 38044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 12311082 - 12311041
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtaca 414  Q
    |||| ||||||||||||||||||| ||||||||| |||||||    
T  12311082 aatgttacatagacaccctttatttccatacacctttgtaca 12311041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Complemental strand, 32029791 - 32029751
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  32029791 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 32029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 39255846 - 39255887
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtaca 414  Q
    |||| |||||||||||||||||||  ||||||||||||||||    
T  39255846 aatgttacatagacaccctttattatcatacacccttgtaca 39255887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 41423747 - 41423682
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||||  |||||||  |||||||| ||| |||| | |||||||||||||| ||||    
T  41423747 tgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatgatgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 4e-40; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 48183055 - 48183151
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  48183055 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaagggtgtctatgtatcattactctt 48183151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 50052434 - 50052530
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50052434 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatgtatcattactctt 50052530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 11511468 - 11511562
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11511468 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 480453 - 480549
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  480453 tgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactctt 480549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 6034138 - 6034044
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6034138 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 41236441 - 41236347
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  41236441 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 42044373 - 42044469
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  42044373 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaagggtgtctatgtatcattactctt 42044469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 54473539 - 54473633
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| ||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  54473539 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 29239980 - 29239884
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||| ||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29239980 tgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaagggtgtctatgtatcattactctt 29239884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 29234251 - 29234346
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||||||| ||||| |||||||||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  29234251 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaagggtgtctatgtatcattactct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 3481748 - 3481654
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||| ||||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  3481748 tgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaggtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 24995113 - 24995210
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttc 554  Q
    |||||||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||||| ||||||||||| || ||||||||||||||    
T  24995113 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaagggtgtccatatatcattactcttc 24995210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 458 - 551
Target Start/End: Original strand, 50526178 - 50526271
Alignment:
Q  458 gtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||  ||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  50526178 gtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 23608329 - 23608233
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||| || || ||| ||||| |||||||||||||||||||||||||||| ||||||||| || |||||||||||||| |||||||||||||    
T  23608329 tgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaagggtgtctatatatcattactctt 23608233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 29977979 - 29977883
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||||| || ||||||||||||||||| || | | |||||||||||||||||    
T  29977979 tgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattactctt 29977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 31910286 - 31910192
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||  || ||  |||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||||    
T  31910286 tgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 461 - 562
Target Start/End: Original strand, 19670726 - 19670827
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctgaaaa 560  Q
    ||||||||||||||| ||| |  | ||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||| | ||||    
T  19670726 cttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttttcaaaa 19670825  T
Q  561 ac 562  Q
    ||    
T  19670826 ac 19670827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 483 - 551
Target Start/End: Complemental strand, 40574847 - 40574779
Alignment:
Q  483 gcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||    
T  40574847 gcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 41236530 - 41236471
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41236530 agagtaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 41236471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 486 - 553
Target Start/End: Complemental strand, 55475256 - 55475189
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||    
T  55475256 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtttatgtatcataactctt 55475189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 461 - 552
Target Start/End: Complemental strand, 47986298 - 47986207
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||||||||||| ||| |  | |||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||| |||||    
T  47986298 cttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataactct 47986207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 461 - 552
Target Start/End: Original strand, 50813902 - 50813993
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||| || |||||  | ||||||||||||||||||||||||| ||||||||| ||||||||| |||| |||||||||| |||||    
T  50813902 cttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagagtgtttatgtatcataactct 50813993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 459 - 546
Target Start/End: Original strand, 53352574 - 53352660
Alignment:
Q  459 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    |||||||||||||||||| | ||| |||||||||||||||||| ||||| ||||  ||||||| ||||||||||||||||||||||||    
T  53352574 tgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-cacctaagggtgtctatgtatcat 53352660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 24995024 - 24995082
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 426  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24995024 agagtaatgatacatagacaccctttattcccatacaccattgtacaccccatgcatta 24995082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 461 - 554
Target Start/End: Complemental strand, 32767048 - 32766955
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttc 554  Q
    ||||||| ||||||| ||| |  | |||||||||||||| |||||||||| ||||||||||||||||||| |||| |||||||||| |||||||    
T  32767048 cttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataactcttc 32766955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 366 - 427
Target Start/End: Original strand, 42044282 - 42044343
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  42044282 aaagagtaatgatacatagacaccctttatttccatacacccttgtacatcccatgcattag 42044343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 48182971 - 48183024
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 426  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcatta 48183024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 461 - 533
Target Start/End: Original strand, 17983753 - 17983825
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggt 533  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17983753 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 486 - 553
Target Start/End: Original strand, 29547994 - 29548061
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||| ||||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactctt 29548061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 6034222 - 6034168
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattag 6034168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 55079749 - 55079814
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||||| ||||    
T  55079749 tgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 28480274 - 28480369
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||| ||||| ||||||||||||||| | ||||||||||||||||| |||| ||   |||||||| ||||||||| ||||||||||| || |||||    
T  28480274 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactct 28480369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 28481149 - 28481244
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||| ||||| ||||||||||||||| | ||||||||||||||||| |||| ||   |||||||| ||||||||| ||||||||||| || |||||    
T  28481149 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactct 28481244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 28482024 - 28482119
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||| ||||| ||||||||||||||| | ||||||||||||||||| |||| ||   |||||||| ||||||||| ||||||||||| || |||||    
T  28482024 tgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtattataactct 28482119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 8343177 - 8343263
Alignment:
Q  465 tgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||| ||| |  | |||||||||||| ||| ||||||||||| ||||||||||||||||| ||| |||||||||| ||||    
T  8343177 tgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 29240064 - 29240014
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  29240064 aatgttacatagacaccctttattcccatacactcttgtacaccccatgca 29240014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 367 - 427
Target Start/End: Complemental strand, 23608419 - 23608359
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| ||||||||||||||| |||||||||||||||| || |||||||| ||||||||||    
T  23608419 aagagtaatgatacatagacatcctttattcccatacatccctgtacacctcatgcattag 23608359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 457 - 513
Target Start/End: Complemental strand, 41823976 - 41823920
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagg 513  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||| |||||    
T  41823976 tgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaagg 41823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 44536781 - 44536846
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||||| |||||| ||||||||||||||||||  |||| |||||||||| |||||    
T  44536781 tgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtttatgtatcataactct 44536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 54473455 - 54473509
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||  ||||||||||||||||||||||||||||||| ||||| |||||    
T  54473455 aatgatacatgaacaccctttattcccatacacccttgtacactccatgtattag 54473509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 18924530 - 18924595
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||| | |||| ||||| ||||    
T  18924530 tgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 47104611 - 47104542
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||| |||||||||||||||||| || |||||||| || |||||  ||||||| |||||||||||||    
T  47104611 cgtgtcaaatttttgtgtgggtgtcagagagtgtattgtcatctaagaatgtctatatatcattactctt 47104542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 48647732 - 48647828
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||| |||||| ||||  ||||| |||||||| ||||||||| ||  |||||||||  |||||||| ||| ||||| |||| ||||||    
T  48647732 tgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaaggatgtttatgtgtcataactctt 48647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 488 - 543
Target Start/End: Original strand, 29589777 - 29589831
Alignment:
Q  488 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtat 543  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||| |||||||    
T  29589777 tcagatttttgtgtgggtgtcaaggggtgtattg-caactaagggtgtttatgtat 29589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 50052350 - 50052393
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacacc 416  Q
    |||| ||||||||||||||||||||||||||||| |||||||||    
T  50052350 aatgttacatagacaccctttattcccatacacctttgtacacc 50052393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 373 - 416
Target Start/End: Original strand, 53352496 - 53352539
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacacc 416  Q
    ||||||||||||||||||||||||  ||||||||||||||||||    
T  53352496 aatgatacatagacaccctttattttcatacacccttgtacacc 53352539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 368 - 426
Target Start/End: Original strand, 11511380 - 11511437
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcatta 426  Q
    |||| ||||||||||||||||  |||||| ||||||||||||||||||| |||||||||    
T  11511380 agagtaatgatacatagacaca-tttatttccatacacccttgtacacctcatgcatta 11511437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 31910370 - 31910316
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| ||||||||||||||| |||||||| ||||| ||||||    
T  31910370 aatgttacatagacaccatttattcccatacactcttgtacatcccatacattag 31910316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 41824060 - 41824006
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| ||||||| |||||||| ||||||||| ||||||||||    
T  41824060 aatgttacatagacaccatttattctcatacacctttgtacacctcatgcattag 41824006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 50526093 - 50526143
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||| |||||||||||| | ||||||||||||||||||||||||    
T  50526093 aatgttacataaacaccctttatttctatacacccttgtacaccccatgca 50526143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 462 - 546
Target Start/End: Complemental strand, 18769198 - 18769114
Alignment:
Q  462 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    ||||| |||||  |||||||  |||||||||||||||||||||||| | ||||||||| |  || ||||| ||| ||||||||||    
T  18769198 ttgtgtggggtttacatgaccacgtgtcagatttttgtgtgggtgttagagggtgtatgggtacataaggatgtttatgtatcat 18769114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 420
Target Start/End: Complemental strand, 40574949 - 40574910
Alignment:
Q  381 atagacaccctttattcccatacacccttgtacaccccat 420  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  40574949 atagacaccttttattctcatacacccttgtacaccccat 40574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 19670638 - 19670692
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  19670638 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 19670692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 29547881 - 29547935
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  29547881 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 29547935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 55475369 - 55475315
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  55475369 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 55475315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 427
Target Start/End: Original strand, 480382 - 480423
Alignment:
Q  386 caccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| ||||| ||||||||| ||||||||||||||||||||    
T  480382 cacccattatttccatacacctttgtacaccccatgcattag 480423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 6e-39; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 504127 - 504221
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  504127 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 12831141 - 12831047
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  12831141 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 15197427 - 15197333
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15197427 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgtctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 40423949 - 40424043
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  40423949 tgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 457 - 553
Target Start/End: Complemental strand, 14548016 - 14547920
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  14548016 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaagggtgtctatgtatctttactctt 14547920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 1179946 - 1180040
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1179946 tgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 37038573 - 37038478
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  37038573 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagatgtctatgtatcattactct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 23122603 - 23122697
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  23122603 tgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 34012302 - 34012396
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34012302 tgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 5957924 - 5957831
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    |||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  5957924 tgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 459 - 552
Target Start/End: Original strand, 44507095 - 44507188
Alignment:
Q  459 tgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||    
T  44507095 tgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagggtgtctatgtatcattactct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 10284637 - 10284733
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||||||||||||| ||||| ||||||| ||||||||||||||||||||| |||||||| ||| |||||||||||||||||||| ||||||    
T  10284637 tgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaagggtgtctatgtatcataactctt 10284733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 15048188 - 15048281
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||  || || |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||    
T  15048188 tgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 461 - 553
Target Start/End: Complemental strand, 16383467 - 16383375
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  16383467 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 16383375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 457 - 532
Target Start/End: Original strand, 8841438 - 8841513
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 532  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  8841438 tgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8841513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 461 - 555
Target Start/End: Complemental strand, 34307306 - 34307212
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttct 555  Q
    |||||||||||| || ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  34307306 cttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactcttct 34307212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 457 - 546
Target Start/End: Original strand, 10621093 - 10621182
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    |||||||||||||| || |  || || ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10621093 tgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 43414587 - 43414681
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| ||||  ||||  ||||| |||||||||||||||||||||||||||| |||||| |||||| |||||||||||||| ||||    
T  43414587 tgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaaggatgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 14548107 - 14548046
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14548107 aaagagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 14548046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 34012203 - 34012272
Alignment:
Q  358 caataaacaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||| |||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  34012203 caataaaaaaagagtaatgatacatagacaccctttattctcgtacacccttgtacaccccatgcattag 34012272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 461 - 553
Target Start/End: Original strand, 24307803 - 24307895
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||| ||| |  | | ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||    
T  24307803 cttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaagggtgtttatgtatcataactctt 24307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 20074967 - 20075034
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||| |||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  20074967 cgtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 504043 - 504097
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 504097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 23122519 - 23122573
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 23122573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 553
Target Start/End: Original strand, 4854900 - 4854965
Alignment:
Q  488 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  4854900 tcagatttttatgtaggtgttaaagggtgtattgccacctaaggatgtctatgtatcattactctt 4854965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 553
Target Start/End: Complemental strand, 24307692 - 24307627
Alignment:
Q  488 tcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactctt 24307627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 486 - 551
Target Start/End: Original strand, 30479509 - 30479574
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  30479509 tgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 42221609 - 42221512
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttc 554  Q
    |||||||||  |||||||| |||| | ||||||||||||||||||||||||| | |  ||||||| ||||||||| ||| ||||||||||||||||||    
T  42221609 tgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaaggatgtatatgtatcattactcttc 42221512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 42710210 - 42710270
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  42710210 aagagtaatgatacacagacaccctttattcccatacacccttgtacaccccatacattag 42710270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 12831225 - 12831171
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattag 12831171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 552
Target Start/End: Complemental strand, 17443914 - 17443824
Alignment:
Q  462 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||| ||||||||||||||| | ||||||||||||||||| |||| ||   |||||||| ||||||||| |||||||||||||| |||||    
T  17443914 ttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggttgtctatgtatcataactct 17443824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 461 - 553
Target Start/End: Original strand, 16056411 - 16056503
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| || ||||||| ||| ||||| ||| |||||||||| ||||||    
T  16056411 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggatgtttatgtatcataactctt 16056503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 468 - 551
Target Start/End: Original strand, 14055609 - 14055692
Alignment:
Q  468 ggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||| ||||| | ||| |||||||||||||| |||||| | |||||||| |||||||||||||| ||||||||| ||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataactc 14055692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 9122279 - 9122196
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    |||||||||||||| ||||| ||||| | ||||||||||||||||||||||          |||||||||||||||||||||||||||||||||    
T  9122279 tgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt----------attgccacctaagggtgtctatgtatcattact 9122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 9122363 - 9122309
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||  |||||||||||||||| |||||||||||||||||||||    
T  9122363 aatgatacatagacattctttattcccatacactcttgtacaccccatgcattag 9122309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 552
Target Start/End: Complemental strand, 32032789 - 32032724
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||||| |||||||||| |||||    
T  32032789 tgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcataactct 32032724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 40423865 - 40423919
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  40423865 aatgatacatagacaccttttattcccatacacccttgtacacctcatgtattag 40423919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 43414503 - 43414557
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  43414503 aatgttacatagacaccctttattgccatacacccttgtacaccccatacattag 43414557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 364 - 425
Target Start/End: Complemental strand, 15197520 - 15197459
Alignment:
Q  364 acaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcatt 425  Q
    |||| ||| ||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  15197520 acaacgagtaatgatacatagacactttttattcccatacacccttgtacacctcatgcatt 15197459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 15258935 - 15259031
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||| |||||||| ||||  | |||||||||||| ||||| |||| | || |||||||||| ||||| || |||||||||||| ||||||    
T  15258935 tgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagagtatctatgtatcataactctt 15259031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 1179862 - 1179916
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||| ||||||| |||||||||||||| | ||||||||||||||||||||||    
T  1179862 aatgatagatagacatcctttattcccatatatccttgtacaccccatgcattag 1179916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 5958008 - 5957958
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||| ||||||||||||| |||||||||||||||||| ||||||    
T  5958008 aatgttacataaacaccctttattctcatacacccttgtacacctcatgca 5957958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 8841354 - 8841404
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||| ||||||| ||||||| |||||||||||||||||    
T  8841354 aatgttacatagacaccatttattctcatacactcttgtacaccccatgca 8841404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 381 - 427
Target Start/End: Original strand, 15048111 - 15048157
Alignment:
Q  381 atagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  15048111 atagacaccctttattccgatacacccttgtacatcccatacattag 15048157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Complemental strand, 37038657 - 37038607
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||| |||||||||||| | ||||||||||||||||||||||||    
T  37038657 aatgttacataaacaccctttatttctatacacccttgtacaccccatgca 37038607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 42354510 - 42354560
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||| ||||||| ||||||||||| |||||||||||||    
T  42354510 aatgttacatagacaccatttattctcatacacccttctacaccccatgca 42354560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 44507010 - 44507063
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||||||||||   ||||||| |||||||||||||||||||||||||||||    
T  44507010 aatgatacatagacata-tttattctcatacacccttgtacaccccatgcattag 44507063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 4854785 - 4854839
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||| |||||||| |||| ||||||||||| ||||| ||||||    
T  4854785 aatgttacatagacactctttattctcatatacccttgtacatcccatacattag 4854839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 10284553 - 10284603
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||| |||||||  ||||| ||||||||||||||||||    
T  10284553 aatgttacatagacaccttttattcttatacaaccttgtacaccccatgca 10284603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 16056323 - 16056377
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  16056323 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 16056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 24307715 - 24307769
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 24307769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 32707925 - 32707979
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  32707925 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 32707979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 2547122 - 2547162
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  2547122 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 2547162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 29705488 - 29705528
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  29705488 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 29705528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 38229493 - 38229429
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||||||||||| | | | ||||||||||||||| ||||  ||||||||| ||||    
T  38229493 tgtcagatttttgtgtgggtgtc-aggagcgtattgccacctaagagtgttcatgtatcataactc 38229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 6e-39; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 32869772 - 32869678
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32869772 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 457 - 548
Target Start/End: Original strand, 22880664 - 22880755
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 548  Q
    |||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22880664 tgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 17598648 - 17598554
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  17598648 tgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaagggtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 11427712 - 11427615
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta--agggtgtctatgtatcattactct 552  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  11427712 tgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagagggtgtctatgtatcattactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 6209471 - 6209567
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||| ||||||||||||| ||||| |||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  6209471 tgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaagggtgtctatgtatcattactctt 6209567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 465 - 551
Target Start/End: Original strand, 31109414 - 31109500
Alignment:
Q  465 tgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  31109414 tgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgtctattaatcattactc 31109500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 461 - 553
Target Start/End: Original strand, 15990052 - 15990144
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  15990052 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 15990144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 461 - 553
Target Start/End: Original strand, 30341370 - 30341462
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  30341370 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactctt 30341462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 457 - 547
Target Start/End: Original strand, 28536494 - 28536582
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcatt 547  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||||||||| || ||||||||||||||||| ||| |||||||||||    
T  28536494 tgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 31976342 - 31976247
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    |||||||||||||||| ||  ||||  |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |||||    
T  31976342 tgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaaggatgtctatgtatcataactct 31976247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 461 - 551
Target Start/End: Original strand, 15508034 - 15508124
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||| ||| |  | ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  15508034 cttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 29857921 - 29857827
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||| |||||| ||||| | ||| |||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||    
T  29857921 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 462 - 560
Target Start/End: Complemental strand, 15832666 - 15832568
Alignment:
Q  462 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctgaaaa 560  Q
    |||||| || ||||| ||||| ||||||| |||||||||||||||||||| | | ||||| ||||||| ||||||||||||||||||||||| ||||||    
T  15832666 ttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggtgtctatgtatcattactcttttgaaaa 15832568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 357 - 427
Target Start/End: Complemental strand, 29858021 - 29857951
Alignment:
Q  357 acaataaacaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29858021 acaaaaaaaaaagagtaatgatacatagacaccatttattcccatacacccttgtacaccccatgcattag 29857951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 32869868 - 32869802
Alignment:
Q  361 taaacaaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32869868 taaaaaaagagtaatgatacatagacaccctttattcccatacatccttgtacaccccatgcattag 32869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 23128133 - 23128229
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    |||||||||| ||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||  ||| ||| ||||||||| |||||||| ||||    
T  23128133 tgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattatcacataaaggtgtctatatatcattattctt 23128229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 368 - 427
Target Start/End: Complemental strand, 11427801 - 11427742
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  11427801 agagtaatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 11427742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 365 - 427
Target Start/End: Complemental strand, 17598740 - 17598678
Alignment:
Q  365 caaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  17598740 caaagagtaatgatacatagacaccttttatttccatacacccttgtacaccccatgcattag 17598678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 31953036 - 31953130
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||| ||||| | |||||||||||   | |||||||||||| |||||||||||| |||||||||||||||||||| ||||||| |||||||||||    
T  31953036 tgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 457 - 553
Target Start/End: Original strand, 31110767 - 31110861
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||| |||||||  ||  | ||||||||||||||||| |  ||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  31110767 tgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaaggatgtctatgtatcataactctt 31110861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 4231638 - 4231548
Alignment:
Q  461 cttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||||||||||| ||| |  ||||||||||||||||||||||| ||| |||||||||||||||||| | ||| |||| ||||| ||||    
T  4231638 cttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatgatgtttatgaatcataactc 4231548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 15832755 - 15832701
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  15832755 aatgatacgtagacaccctttattccaatacacccttgtacaccccatgcattag 15832701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 22880574 - 22880634
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  22880574 aagagtaatgatacatatacaccatttattcccatacacccttgtacaccccatgtattag 22880634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 485 - 550
Target Start/End: Complemental strand, 946442 - 946377
Alignment:
Q  485 gtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattact 550  Q
    |||||||||||||| || ||||||||||||||||||  ||||||||| |||||||||||| |||||    
T  946442 gtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaaggatgtctatgtatcgttact 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 12732549 - 12732480
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||||||||||||||||||||| |  | ||||||||| ||||  |||||||||||||||||||||    
T  12732549 cgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactctt 12732480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 31976426 - 31976372
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  31976426 aatgttacatagacaccatttattctcatacacccttgtacaccccatacattag 31976372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 546
Target Start/End: Original strand, 9379745 - 9379807
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 546  Q
    ||||||| |||||||| |||||||||| || ||||||| || |||||| ||||||||||||||    
T  9379745 cgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 486 - 552
Target Start/End: Original strand, 22422053 - 22422119
Alignment:
Q  486 tgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 552  Q
    ||||||| |||||| || |||||||  | | ||||||||||||||| ||||||||||||||||||||    
T  22422053 tgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcattactct 22422119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 31110683 - 31110737
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  31110683 aatgttacatagacatcctttatttccatacacctttgtacaccccatacattag 31110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 23128043 - 23128103
Alignment:
Q  368 agaggaatgatacatagacacccttt-attcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||| | ||||| ||| ||||||||||||||||| ||||||||||||    
T  23128043 agagtaatgatacatagagaaccttttatttccatacacccttgtacatcccatgcattag 23128103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 368 - 427
Target Start/End: Original strand, 6209383 - 6209441
Alignment:
Q  368 agaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| ||||||||||||| ||||||||||||| |||| | ||||||| ||||||||||||    
T  6209383 agagtaatgatacatagataccctttattccc-tacatctttgtacatcccatgcattag 6209441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 4231726 - 4231672
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  4231726 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 4231672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 415
Target Start/End: Original strand, 22422001 - 22422043
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacac 415  Q
    |||| |||||||||||| ||||||| |||||||||||||||||    
T  22422001 aatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 31952952 - 31953002
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||||||||| ||||||| |||||| |||| |||||||||||||    
T  31952952 aatgttacatagacaccatttattctcatacatccttctacaccccatgca 31953002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 7367675 - 7367715
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  7367675 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 7367715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 9698307 - 9698239
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactctt 553  Q
    ||||||||| |||||| ||||||| ||||||||||||||||| | |||  ||  ||||||||||||||||    
T  9698307 cgtgtcagaattttgtatgggtgt-aaagggtgtattgccacatgaggtggtacatgtatcattactctt 9698239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Complemental strand, 26669983 - 26669943
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  26669983 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 26669943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 10115 - 10220
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactcttctg 556  Q
    ||||||||| || ||||||| ||||| |||||||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||| |     
T  10115 tgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaaggtgtctatgtatcataactcttttt 10214  T
Q  557 aaaaac 562  Q
    ||||||    
T  10215 aaaaac 10220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 10025 - 10085
Alignment:
Q  367 aagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  10025 aagagtaatgatacatagacacccattatttccatacacccttgtacaccctatgcattag 10085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 935 - 1029
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| | ||| ||||| |||||||| ||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 851 - 901
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  851 aatgttacataaacaccctttattcccatacactcttgtacaccccatgca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 551
Target Start/End: Original strand, 935 - 1029
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    |||||||||||||| | ||| ||||| |||||||| ||||||||||| ||| ||||||||||||||||||||| | |||||||||||||||||||    
T  935 tgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 851 - 901
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccatgca 423  Q
    |||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  851 aatgttacataaacaccctttattcccatacactcttgtacaccccatgca 901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 457 - 551
Target Start/End: Complemental strand, 4123 - 4029
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 551  Q
    ||||||| |||||| ||||| | ||| |||||||||||||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||    
T  4123 tgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaaggtgtctatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 366 - 427
Target Start/End: Complemental strand, 4214 - 4153
Alignment:
Q  366 aaagaggaatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 427  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  4214 aaagagtaatgatacatagacaccatttattcccatacacccttgtacaccccatgcattag 4153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 462 - 535
Target Start/End: Complemental strand, 152587 - 152514
Alignment:
Q  462 ttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgt 535  Q
    ||||||||| |||| |||||  | ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  152587 ttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagggtgt 152514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 32; Significance: 0.00000002; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 528
Target Start/End: Complemental strand, 17148 - 17077
Alignment:
Q  457 tgtgcttgtgcggggtccacatgactgcgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 528  Q
    |||||||||||||||||||  ||||  | |||||||||||||||||| |||| | || |||||||| |||||    
T  17148 tgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgagggatgtattgcaaccta 17077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 416
Target Start/End: Complemental strand, 17281 - 17238
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacacc 416  Q
    |||| ||||||||||||||||||| ||||||||| |||||||||    
T  17281 aatgttacatagacaccctttatttccatacacctttgtacacc 17238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 373 - 420
Target Start/End: Original strand, 8785 - 8832
Alignment:
Q  373 aatgatacatagacaccctttattcccatacacccttgtacaccccat 420  Q
    |||| |||||||||||| |||||||  |||||||||||||||||||||    
T  8785 aatgttacatagacaccttttattcttatacacccttgtacaccccat 8832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 484 - 525
Target Start/End: Original strand, 811 - 851
Alignment:
Q  484 cgtgtcagatttttgtgtgggtgtcaaagggtgtattgccac 525  Q
    ||||||||| |||||||||||||| |||||||||||||||||    
T  811 cgtgtcagaattttgtgtgggtgt-aaagggtgtattgccac 851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University