View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11402_high_14 (Length: 415)
Name: NF11402_high_14
Description: NF11402
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11402_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 11 - 315
Target Start/End: Original strand, 2953724 - 2954030
Alignment:
| Q |
11 |
caaaggtggcaaagtatccagctagtatagtgaagcacacactctctgaagtgtataagaaaatacaagaagatcatttatttagtagagaaaaaatatg |
110 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2953724 |
caaaggtggcaaagtatccagctagtatagtgaagcacacactctctgaagtgtataagaaaatacaagaagatcatttatttagtagagaaaaaatatg |
2953823 |
T |
|
| Q |
111 |
tgttaaagttgtaagaacaactaagatgattgacaattgcaggaatgttaacatgtaggaatttgaattccgacctaannnnnnnnataggtgtgtgtga |
210 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
2953824 |
tgttaaggttgtaagaacaactaagatgattgacaattgcaggaatgttaacatgtaggaatttgaattccgacctaattttttttataggtgtgtgtga |
2953923 |
T |
|
| Q |
211 |
--gtataataagttactaaatctatcaatggctgnnnnnnntaaaattaataacaaaagaattttgattctcccttcactatattttgttggcaaattta |
308 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2953924 |
tcgtataataagttactaaatctatcaatggctgaaaaaaataaaattaataacaaaagaattttgattctcccttcactatattttgttggcaaattta |
2954023 |
T |
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| Q |
309 |
ctcatgt |
315 |
Q |
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||||||| |
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| T |
2954024 |
ctcatgt |
2954030 |
T |
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