View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11403_low_4 (Length: 315)
Name: NF11403_low_4
Description: NF11403
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11403_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 18 - 299
Target Start/End: Complemental strand, 21878469 - 21878188
Alignment:
| Q |
18 |
cactcaacactataaccttttacacaaaaacagttagaattctatttaacagaattgtataaagctacgtagcaccaacactcgacaatatgtattgaaa |
117 |
Q |
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| T |
21878469 |
cactcaacactataaccttttacacaaaaacagttagaattctatttaacagaattgtataaagctacgtagcaccaacactcgacaatatgtattgaaa |
21878370 |
T |
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| Q |
118 |
gcgtgaacaaatatctgacacatgaacatacaatcatttcaatttttcaaactattaccgatgtttgagtctgttcttggtcagtgcatcataggaaaaa |
217 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |
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| T |
21878369 |
gcgtgaccaaatatctgacacatgaacatacaatcatttcaatttttcaaactattaccaatgtttgagtctgtttttggtcagtgcatcataggaaaaa |
21878270 |
T |
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| Q |
218 |
agattggtataaaaagaatttacataatctcaatactcacctccttaacctcctcttcagataacctaccatctccattctt |
299 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
21878269 |
agattggtataaaaagaatttacataatctcaatactcacctccttaacctcctcttcggataacctaccatctccattctt |
21878188 |
T |
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