View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11405_high_12 (Length: 367)
Name: NF11405_high_12
Description: NF11405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11405_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 20 - 349
Target Start/End: Complemental strand, 47527420 - 47527106
Alignment:
| Q |
20 |
agatccctgttgccatgagtagtaaaagaaaacattagtatttttaagaagagtatttcatttcatagtaaatcacaactgatcagagtaacaactaaca |
119 |
Q |
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| T |
47527420 |
agatccctgttgccatgagtagtaaaagaaaacattagtattt---------------catttcatagtaaatcacaactgatcagagtaacaactaaca |
47527336 |
T |
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| Q |
120 |
agcactccttaaatttattgacttgacaattgtttggacgactaattttttgctattaagcttacatgaaaacctagtggaatgaatgaatcatgccatt |
219 |
Q |
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| T |
47527335 |
agcactccttaaattgattgacttgacaattgtttggacgagtaattttttgctattaagcttacatgaaaacctagtggaatgaatgaatcatgccatt |
47527236 |
T |
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| Q |
220 |
ggatgatgtctaattcaacaatacaatgattttgaccgaatatccaaacatacacgttagtcttttccacccatgaaagcaaattgccacacacagaaaa |
319 |
Q |
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| T |
47527235 |
ggatgatgtctaattcaacaatacaatgattttgaccgaatatccaaacatacacgttagtcttttccacccatgaaagcaaattgccacaaacagaaaa |
47527136 |
T |
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| Q |
320 |
tatataggaaattaaattgtatcaggcaaa |
349 |
Q |
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| T |
47527135 |
tatataggaaattaaattgtatcaggcaaa |
47527106 |
T |
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