View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11405_low_7 (Length: 490)

Name: NF11405_low_7
Description: NF11405
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11405_low_7
NF11405_low_7
[»] chr3 (44 HSPs)
chr3 (20-427)||(49465772-49466184)
chr3 (212-337)||(31010421-31010547)
chr3 (226-330)||(37273167-37273272)
chr3 (419-471)||(49465674-49465726)
chr3 (212-308)||(30923853-30923949)
chr3 (206-290)||(31710860-31710944)
chr3 (206-290)||(31711115-31711199)
chr3 (215-266)||(1360523-1360574)
chr3 (412-462)||(30443895-30443945)
chr3 (412-454)||(36189568-36189610)
chr3 (224-273)||(38318991-38319040)
chr3 (221-309)||(43115084-43115173)
chr3 (419-455)||(901933-901969)
chr3 (226-309)||(1810010-1810094)
chr3 (410-462)||(2825147-2825199)
chr3 (221-285)||(20192584-20192648)
chr3 (419-455)||(39980738-39980774)
chr3 (412-463)||(44488884-44488936)
chr3 (221-285)||(48588685-48588749)
chr3 (412-464)||(50600194-50600246)
chr3 (294-330)||(51929843-51929879)
chr3 (256-330)||(2100111-2100186)
chr3 (212-330)||(11253520-11253639)
chr3 (419-462)||(20880485-20880528)
chr3 (413-455)||(32582747-32582789)
chr3 (229-302)||(41452559-41452633)
chr3 (227-281)||(52412886-52412940)
chr3 (220-281)||(482774-482835)
chr3 (419-464)||(21367676-21367721)
chr3 (221-290)||(21574518-21574587)
chr3 (212-289)||(24887258-24887334)
chr3 (256-336)||(25459556-25459637)
chr3 (226-330)||(29771871-29771976)
chr3 (419-456)||(36631075-36631112)
chr3 (419-464)||(37273143-37273188)
chr3 (228-269)||(44374639-44374680)
chr3 (418-462)||(466201-466245)
chr3 (212-284)||(27290880-27290952)
chr3 (419-455)||(35696247-35696283)
chr3 (359-395)||(45083049-45083085)
chr3 (419-455)||(47132340-47132376)
chr3 (256-331)||(49605782-49605858)
chr3 (424-464)||(50952347-50952387)
chr3 (221-273)||(50952361-50952413)
[»] chr6 (38 HSPs)
chr6 (221-331)||(8420128-8420239)
chr6 (219-330)||(725587-725699)
chr6 (221-284)||(2455838-2455901)
chr6 (221-284)||(4420671-4420734)
chr6 (221-330)||(7148694-7148804)
chr6 (212-290)||(32577959-32578037)
chr6 (229-309)||(3775081-3775162)
chr6 (212-308)||(34538172-34538269)
chr6 (212-285)||(34939763-34939836)
chr6 (256-330)||(2460083-2460158)
chr6 (226-285)||(8010390-8010449)
chr6 (220-330)||(30863273-30863384)
chr6 (256-330)||(32917260-32917335)
chr6 (212-290)||(29957895-29957973)
chr6 (212-290)||(34939532-34939610)
chr6 (226-278)||(283128-283180)
chr6 (412-464)||(31624957-31625009)
chr6 (221-285)||(32171495-32171559)
chr6 (256-290)||(2027771-2027805)
chr6 (212-283)||(34405130-34405203)
chr6 (298-340)||(34429636-34429678)
chr6 (419-464)||(415313-415358)
chr6 (419-464)||(835265-835310)
chr6 (227-284)||(3155209-3155266)
chr6 (235-280)||(3774988-3775033)
chr6 (221-274)||(9667974-9668027)
chr6 (214-279)||(27595551-27595616)
chr6 (214-279)||(27693423-27693488)
chr6 (419-464)||(27909654-27909699)
chr6 (350-395)||(33890666-33890711)
chr6 (221-266)||(34544141-34544186)
chr6 (221-285)||(2205569-2205632)
chr6 (412-464)||(4420645-4420697)
chr6 (212-284)||(7931705-7931777)
chr6 (220-284)||(9027605-9027669)
chr6 (365-397)||(10617049-10617081)
chr6 (226-290)||(32171356-32171420)
chr6 (217-273)||(34403879-34403935)
[»] chr5 (38 HSPs)
chr5 (228-331)||(32172688-32172792)
chr5 (221-290)||(41052896-41052965)
chr5 (256-330)||(11457161-11457236)
chr5 (359-409)||(30291154-30291204)
chr5 (226-330)||(11297128-11297233)
chr5 (412-464)||(42582914-42582966)
chr5 (212-326)||(17259236-17259351)
chr5 (420-462)||(12857723-12857765)
chr5 (350-427)||(5963391-5963468)
chr5 (226-330)||(25720349-25720454)
chr5 (412-464)||(4014440-4014492)
chr5 (359-427)||(10771987-10772055)
chr5 (221-285)||(11700356-11700420)
chr5 (365-425)||(28776874-28776934)
chr5 (229-331)||(6109519-6109622)
chr5 (420-462)||(1130978-1131020)
chr5 (410-464)||(1899154-1899208)
chr5 (225-330)||(1899186-1899291)
chr5 (256-330)||(2092423-2092497)
chr5 (221-302)||(37611175-37611257)
chr5 (221-302)||(37787905-37787987)
chr5 (406-464)||(40590754-40590812)
chr5 (361-427)||(42573888-42573954)
chr5 (221-290)||(12242683-12242752)
chr5 (350-427)||(14675009-14675086)
chr5 (221-266)||(19138714-19138759)
chr5 (365-426)||(39105363-39105424)
chr5 (225-266)||(42582231-42582272)
chr5 (263-330)||(14599304-14599372)
chr5 (213-308)||(19177008-19177104)
chr5 (220-248)||(29588906-29588934)
chr5 (419-447)||(32009701-32009729)
chr5 (412-464)||(34160733-34160785)
chr5 (213-265)||(36638767-36638819)
chr5 (419-455)||(37954695-37954731)
chr5 (226-329)||(38728435-38728539)
chr5 (359-427)||(41819505-41819573)
chr5 (423-455)||(42500266-42500298)
[»] chr2 (54 HSPs)
chr2 (208-290)||(1742005-1742087)
chr2 (212-284)||(32821828-32821900)
chr2 (221-280)||(27237876-27237935)
chr2 (412-457)||(6167306-6167351)
chr2 (258-330)||(9996803-9996876)
chr2 (221-282)||(34652017-34652078)
chr2 (221-289)||(43065424-43065492)
chr2 (226-273)||(9595291-9595338)
chr2 (232-330)||(15120222-15120321)
chr2 (412-454)||(30331762-30331804)
chr2 (221-279)||(41042006-41042064)
chr2 (242-279)||(15967718-15967755)
chr2 (226-310)||(41809197-41809282)
chr2 (407-464)||(41817165-41817222)
chr2 (412-464)||(3078656-3078708)
chr2 (412-464)||(16398116-16398168)
chr2 (226-290)||(18884900-18884964)
chr2 (221-308)||(31228791-31228879)
chr2 (224-310)||(787363-787450)
chr2 (212-267)||(5781688-5781743)
chr2 (232-283)||(30538153-30538204)
chr2 (227-309)||(43456660-43456743)
chr2 (221-291)||(2410018-2410087)
chr2 (221-279)||(5133800-5133858)
chr2 (359-421)||(9833048-9833110)
chr2 (412-462)||(12464491-12464541)
chr2 (293-331)||(14302923-14302961)
chr2 (420-462)||(22971508-22971550)
chr2 (221-323)||(24098130-24098231)
chr2 (412-462)||(29316793-29316843)
chr2 (208-245)||(1741532-1741569)
chr2 (212-308)||(29429711-29429808)
chr2 (221-290)||(35555155-35555224)
chr2 (226-290)||(38388719-38388784)
chr2 (419-464)||(40279276-40279321)
chr2 (419-464)||(40279346-40279391)
chr2 (419-464)||(40279416-40279461)
chr2 (419-464)||(43173231-43173276)
chr2 (412-464)||(680505-680557)
chr2 (424-464)||(750684-750724)
chr2 (242-290)||(4550796-4550844)
chr2 (208-264)||(10198479-10198535)
chr2 (419-455)||(20952364-20952400)
chr2 (259-330)||(22878164-22878236)
chr2 (410-462)||(26143658-26143710)
chr2 (419-455)||(26202037-26202073)
chr2 (412-456)||(27695619-27695663)
chr2 (221-281)||(31739954-31740014)
chr2 (419-455)||(32592595-32592631)
chr2 (227-291)||(33256774-33256838)
chr2 (221-269)||(36852500-36852548)
chr2 (225-285)||(37186294-37186354)
chr2 (424-456)||(40835542-40835574)
chr2 (419-455)||(43279554-43279590)
[»] chr4 (44 HSPs)
chr4 (214-330)||(11264322-11264439)
chr4 (212-290)||(6987714-6987792)
chr4 (224-290)||(10812539-10812605)
chr4 (212-282)||(29467605-29467675)
chr4 (212-330)||(24370883-24371004)
chr4 (212-336)||(19394689-19394814)
chr4 (256-330)||(27123284-27123359)
chr4 (226-280)||(2874607-2874661)
chr4 (230-330)||(3637310-3637416)
chr4 (214-280)||(6978945-6979011)
chr4 (209-290)||(27725230-27725311)
chr4 (220-285)||(28406939-28407004)
chr4 (350-415)||(50298415-50298480)
chr4 (221-273)||(1312869-1312921)
chr4 (412-464)||(17975385-17975437)
chr4 (212-284)||(21157787-21157859)
chr4 (226-290)||(45128283-45128347)
chr4 (419-454)||(26890-26925)
chr4 (419-454)||(9760449-9760484)
chr4 (234-285)||(41097234-41097285)
chr4 (256-290)||(7749064-7749098)
chr4 (212-290)||(21952967-21953045)
chr4 (232-330)||(25896819-25896922)
chr4 (419-464)||(825506-825551)
chr4 (423-464)||(2592325-2592366)
chr4 (212-273)||(6466036-6466097)
chr4 (261-329)||(18628486-18628555)
chr4 (224-329)||(21592941-21593045)
chr4 (419-464)||(23676706-23676751)
chr4 (212-336)||(44319968-44320093)
chr4 (423-455)||(2244064-2244096)
chr4 (224-331)||(2841657-2841765)
chr4 (227-330)||(2996607-2996711)
chr4 (412-464)||(6364151-6364203)
chr4 (424-464)||(14011248-14011288)
chr4 (359-427)||(17751231-17751299)
chr4 (350-418)||(22539165-22539232)
chr4 (212-284)||(28614787-28614859)
chr4 (419-455)||(33586980-33587016)
chr4 (419-455)||(46588098-46588134)
chr4 (419-455)||(46592234-46592270)
chr4 (226-282)||(49032031-49032087)
chr4 (412-456)||(49940193-49940237)
chr4 (412-464)||(51630113-51630165)
[»] chr8 (41 HSPs)
chr8 (224-330)||(30191073-30191180)
chr8 (213-330)||(6950342-6950460)
chr8 (212-310)||(14949885-14949984)
chr8 (221-330)||(9700029-9700139)
chr8 (227-285)||(37740405-37740462)
chr8 (221-290)||(4055589-4055658)
chr8 (221-290)||(8558688-8558757)
chr8 (419-464)||(43504760-43504805)
chr8 (226-330)||(7008632-7008736)
chr8 (215-330)||(43368632-43368748)
chr8 (213-276)||(43704363-43704426)
chr8 (212-290)||(6509276-6509354)
chr8 (207-312)||(31875545-31875651)
chr8 (212-273)||(24258085-24258146)
chr8 (226-326)||(44401594-44401694)
chr8 (261-336)||(2091831-2091907)
chr8 (221-285)||(11183573-11183637)
chr8 (232-310)||(11569409-11569488)
chr8 (419-454)||(30657798-30657833)
chr8 (365-420)||(37444531-37444586)
chr8 (420-462)||(18133666-18133708)
chr8 (256-325)||(39049335-39049405)
chr8 (257-330)||(43393704-43393778)
chr8 (212-273)||(3254244-3254305)
chr8 (423-464)||(3536961-3537002)
chr8 (374-427)||(8216788-8216841)
chr8 (220-265)||(11121802-11121847)
chr8 (212-285)||(11415173-11415246)
chr8 (221-274)||(25869255-25869308)
chr8 (214-279)||(29262858-29262923)
chr8 (212-245)||(30277263-30277296)
chr8 (226-290)||(30987964-30988029)
chr8 (261-336)||(1561345-1561421)
chr8 (423-463)||(3537046-3537086)
chr8 (420-456)||(6881936-6881972)
chr8 (263-330)||(7918713-7918781)
chr8 (412-464)||(10114491-10114543)
chr8 (412-464)||(28769355-28769407)
chr8 (213-273)||(29169087-29169147)
chr8 (419-463)||(39881769-39881813)
chr8 (256-299)||(40071812-40071856)
[»] chr7 (35 HSPs)
chr7 (227-290)||(3500940-3501003)
chr7 (226-290)||(48157093-48157157)
chr7 (215-282)||(12234870-12234937)
chr7 (206-330)||(33894640-33894765)
chr7 (359-422)||(7612352-7612415)
chr7 (359-422)||(40598480-40598543)
chr7 (225-279)||(2767162-2767216)
chr7 (412-462)||(46280290-46280340)
chr7 (232-330)||(1418460-1418557)
chr7 (419-455)||(19022610-19022646)
chr7 (419-455)||(21568520-21568556)
chr7 (221-285)||(42281492-42281556)
chr7 (214-285)||(4966177-4966248)
chr7 (232-330)||(13960656-13960754)
chr7 (256-310)||(36537971-36538026)
chr7 (231-290)||(36598329-36598388)
chr7 (212-330)||(40428574-40428693)
chr7 (220-282)||(27626104-27626166)
chr7 (412-454)||(49019870-49019912)
chr7 (226-283)||(5017920-5017977)
chr7 (419-464)||(7244689-7244734)
chr7 (221-309)||(22387849-22387938)
chr7 (208-245)||(26935575-26935612)
chr7 (423-464)||(39280982-39281023)
chr7 (235-284)||(44686972-44687021)
chr7 (226-330)||(44808191-44808296)
chr7 (412-464)||(12792579-12792631)
chr7 (367-427)||(19718908-19718968)
chr7 (363-427)||(21619304-21619368)
chr7 (221-285)||(27496386-27496449)
chr7 (221-285)||(27503044-27503107)
chr7 (221-269)||(27517850-27517898)
chr7 (412-456)||(43694594-43694638)
chr7 (221-285)||(44615082-44615146)
chr7 (229-285)||(45078314-45078370)
[»] chr1 (49 HSPs)
chr1 (226-337)||(6231741-6231853)
chr1 (212-308)||(23373267-23373363)
chr1 (232-300)||(4202115-4202182)
chr1 (412-455)||(51929564-51929607)
chr1 (221-330)||(1662601-1662711)
chr1 (412-462)||(5741608-5741658)
chr1 (221-330)||(6976953-6977062)
chr1 (221-330)||(31517672-31517782)
chr1 (419-464)||(12564515-12564560)
chr1 (212-285)||(15437982-15438055)
chr1 (221-326)||(32859883-32859988)
chr1 (226-330)||(33723314-33723419)
chr1 (419-455)||(3234040-3234076)
chr1 (412-464)||(14629982-14630034)
chr1 (222-290)||(15579511-15579579)
chr1 (258-290)||(24153346-24153378)
chr1 (226-330)||(30815586-30815690)
chr1 (414-462)||(37631577-37631625)
chr1 (256-330)||(4549473-4549548)
chr1 (411-462)||(5720926-5720977)
chr1 (228-314)||(17420238-17420325)
chr1 (221-284)||(30259465-30259528)
chr1 (212-267)||(33975589-33975644)
chr1 (223-269)||(3597275-3597321)
chr1 (412-462)||(7137016-7137066)
chr1 (365-427)||(7137110-7137172)
chr1 (212-290)||(10439705-10439783)
chr1 (229-283)||(17628635-17628689)
chr1 (221-310)||(26179500-26179589)
chr1 (358-427)||(4549758-4549827)
chr1 (261-309)||(5157140-5157189)
chr1 (212-285)||(7262496-7262569)
chr1 (427-464)||(10809362-10809399)
chr1 (208-245)||(28083308-28083345)
chr1 (293-330)||(35017683-35017720)
chr1 (419-464)||(42174864-42174909)
chr1 (412-457)||(44422701-44422746)
chr1 (293-330)||(48748527-48748564)
chr1 (375-427)||(1829063-1829115)
chr1 (263-326)||(4118807-4118871)
chr1 (412-464)||(6102156-6102208)
chr1 (420-464)||(15784339-15784383)
chr1 (419-455)||(17603409-17603445)
chr1 (230-290)||(24502801-24502861)
chr1 (412-464)||(27140480-27140532)
chr1 (221-273)||(35925718-35925770)
chr1 (412-444)||(41505688-41505720)
chr1 (221-281)||(45999270-45999330)
chr1 (419-455)||(49938756-49938792)
[»] scaffold0159 (1 HSPs)
scaffold0159 (212-267)||(27020-27075)
[»] scaffold0147 (2 HSPs)
scaffold0147 (212-289)||(12678-12755)
scaffold0147 (419-464)||(23640-23685)
[»] scaffold0332 (1 HSPs)
scaffold0332 (229-273)||(1123-1167)


Alignment Details
Target: chr3 (Bit Score: 348; Significance: 0; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 20 - 427
Target Start/End: Complemental strand, 49466184 - 49465772
Alignment:
Q  20 caaacagcatgtcaattatagcaaaattgaactcaactatcttcttctcactccctccaatccaatagtaacacaatgccccaataaaataaactnnnnn 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
T  49466184 caaacagcatgtcaattatagcaaaattgaactcaactatcttcttctcactccctccaatccaatagtaacacaatgccccaataaaataaactaaaaa 49466085  T
Q  120 nntaatgaattttagaaaaccatttgtttagaattaagggcttatagcaaaattgcttgtcataaaataaaat-----aaaagattgcatccttaatcta 214  Q
       ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||     ||||||||||||||||||||||    
T  49466084 aagaatgaattttagaaaaccatttgtttagaattaagcgcttatagcaaaagtgcttatcataaaataaaataaaataaaagattgcatccttaatcta 49465985  T
Q  215 tcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaat 314  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49465984 tcctaaagagtttatggaaataagttgaaaatagttcatggacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaat 49465885  T
Q  315 ggataagctcaaataaaacaatttaaggcgctatgtggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaa 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49465884 ggataagctcaaataaaacaatttaaggcgctatgtggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaa 49465785  T
Q  415 gctatttttataa 427  Q
    |||||||||||||    
T  49465784 gctatttttataa 49465772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 337
Target Start/End: Original strand, 31010421 - 31010547
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 310  Q
    ||||| || |||| |||||||| ||||||||||| || | ||| ||||||||||||||||||||||||||| ||||||| || |||||||||  |||||     
T  31010421 ctatcatagagagcttatggaattaagctgaaaacagcttatggacatgtcataagttgtttctataagctttcacaaacacactcacaagttcttatgt 31010520  T
Q  311 taatggataagctcaaataaaacaatt 337  Q
    || | | |||| |||||||||| ||||    
T  31010521 tagtagttaagttcaaataaaataatt 31010547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 37273167 - 37273272
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 324  Q
    ||||||||||||| |||||| |  | ||| ||||||||||||||||||| |||||||||| |||| | |||||| |||| ||||||||||  ||||| ||    
T  37273167 ttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgcttatgctaataaataagttc 37273266  T
Q  325 aaataa 330  Q
    ||||||    
T  37273267 aaataa 37273272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 419 - 471
Target Start/End: Complemental strand, 49465726 - 49465674
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaacacctaatg 471  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  49465726 ttttcataagctatactggagaacttatggaaataagcttaaaaaacctaatg 49465674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 30923949 - 30923853
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 308  Q
    |||||||| ||||||||| ||||||||||||||| || | ||  |||||||||||| |||||| || |||||||| ||| | ||||||||||||||||    
T  30923949 ctatcctagagagtttatagaaataagctgaaaacagcttatagacatgtcataagctgtttccat-agctctcataaacagtctcacaagtgtttat 30923853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 31710944 - 31710860
Alignment:
Q  206 cttaatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||| ||||| || |||| || ||||| ||||||||||| || |||||  ||||||||||||||||| |||||||| |||||||    
T  31710944 cttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgtttttataagctttcacaaa 31710860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 206 - 290
Target Start/End: Complemental strand, 31711199 - 31711115
Alignment:
Q  206 cttaatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||| ||||| || |||| || ||||| ||||||||||| || |||||  ||||||||||||||||| |||||||| |||||||    
T  31711199 cttaacctatcttagagagcttttggaattaagctgaaaacagctcatgggcatgtcataagttgtttttataagctttcacaaa 31711115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 1360574 - 1360523
Alignment:
Q  215 tcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataa 266  Q
    ||||||||||||| |||||||||||||||||||| | ||| |||||||||||    
T  1360574 tcctaaagagtttgtggaaataagctgaaaatagcttatggacatgtcataa 1360523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 30443895 - 30443945
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||||| ||||    
T  30443895 taagctgtttttataaactatattggagaacttatgaaaataagctgaaaa 30443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 36189568 - 36189610
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataa 454  Q
    ||||||||||||||||| |||||||||||||||||| ||||||    
T  36189568 taagctatttttataagatatattggagaacttatgaaaataa 36189610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 38318991 - 38319040
Alignment:
Q  224 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    ||||||||||||||||||||||||| | ||| |||||| |||||||||||    
T  38318991 gtttatggaaataagctgaaaatagcttatgaacatgttataagttgttt 38319040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 309
Target Start/End: Original strand, 43115084 - 43115173
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 309  Q
    |||| |||||||||||||||||||| |  | ||| ||||||||||||||||||| |||| ||||  |||| | ||||||||||| |||||    
T  43115084 agagcttatggaaataagctgaaaacaagttatggacatgtcataagttgtttccataaactcttccaaacaatctcacaagtgattatg 43115173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 901933 - 901969
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    ||||||||||||||||||||||||||||| |||||||    
T  901933 tttttataagctatattggagaacttatgaaaataag 901969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 309
Target Start/End: Original strand, 1810010 - 1810094
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 309  Q
    |||| ||||||||| ||||| |  ||||| |||||||||||||||||||  ||||||||| |||| | ||||||||||| |||||    
T  1810010 ttatagaaataagcagaaaacaactcatggacatgtcataagttgtttccgtaagctctctcaaatagtctcacaagtgattatg 1810094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 462
Target Start/End: Original strand, 2825147 - 2825199
Alignment:
Q  410 tgtaagctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||| |||||| ||||||||| ||||||| |||||| ||||||||||||||    
T  2825147 tgtaagttattttcataagctatcttggagagcttatgaaaataagcttaaaa 2825199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 20192648 - 20192584
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||| |||||||||| || |||||| || | ||| |||||||||||| |||||||||||||||||    
T  20192648 agagcttatggaaatgagttgaaaacagcttatggacatgtcataagctgtttctataagctctc 20192584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 39980738 - 39980774
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    ||||||||||||||||||||||||||||| |||||||    
T  39980738 tttttataagctatattggagaacttatgaaaataag 39980774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 463
Target Start/End: Original strand, 44488884 - 44488936
Alignment:
Q  412 taagctattttt-ataagctatattggagaacttatggaaataagcttaaaac 463  Q
    |||||||||||| ||||||||| || ||||||||||||||||||||| |||||    
T  44488884 taagctatttttcataagctatcttagagaacttatggaaataagctgaaaac 44488936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 48588685 - 48588749
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    ||||||| ||||||| ||||||||| | || | | |||||||||||||||||| |||||||||||    
T  48588685 agagtttgtggaaattagctgaaaacactttaagaacatgtcataagttgtttatataagctctc 48588749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 50600246 - 50600194
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| |||| || ||||||||||||||||||||| ||||||||| ||||||    
T  50600246 taagctgttttcatcagctatattggagaacttatgaaaataagctgaaaaca 50600194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 330
Target Start/End: Original strand, 51929843 - 51929879
Alignment:
Q  294 ctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    ||||||||||||||||||||| |||||||||||||||    
T  51929843 ctcacaagtgtttatgctaatagataagctcaaataa 51929879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 2100186 - 2100111
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||||||| ||| || ||||||||||||||| | ||||||||||||||  ||| |  |||||||||||||||    
T  2100186 acatgtcataagctgtctccataagctctcacaaacagtctcacaagtgttttagctgaaagataagctcaaataa 2100111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 330
Target Start/End: Original strand, 11253520 - 11253639
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 310  Q
    |||||||| |||| ||| ||||||| |||||||| |||| ||  | |||||||||||||||| |||||  |||  |||| | |||| |||||| ||||||    
T  11253520 ctatcctagagagcttagggaaataggctgaaaacagtttatagatatgtcataagttgtttttataaattctgccaaacagtctctcaagtgcttatgc 11253619  T
Q  311 taatggataagctcaaataa 330  Q
    || | ||||| |||||||||    
T  11253620 tagtagataatctcaaataa 11253639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Original strand, 20880485 - 20880528
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||    
T  20880485 tttttaaaagctatattggagaacttatgaaaataagctcaaaa 20880528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 455
Target Start/End: Original strand, 32582747 - 32582789
Alignment:
Q  413 aagctatttttataagctatattggagaacttatggaaataag 455  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||    
T  32582747 aagctgttttcataagctattttggagaacttatggaaataag 32582789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 302
Target Start/End: Original strand, 41452559 - 41452633
Alignment:
Q  229 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagt 302  Q
    |||||||||| |||||| || | ||  |||| |||||||||||||||||||| |||| |||| ||||||||||||    
T  41452559 tggaaataaggtgaaaacagcttatagacatatcataagttgtttctataaggtctctcaaatactctcacaagt 41452633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 281
Target Start/End: Complemental strand, 52412940 - 52412886
Alignment:
Q  227 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagc 281  Q
    ||||||||||||||||||| || | ||  |||||||||| |||||||||||||||    
T  52412940 tatggaaataagctgaaaacagcttataaacatgtcataggttgtttctataagc 52412886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 281
Target Start/End: Complemental strand, 482835 - 482774
Alignment:
Q  220 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagc 281  Q
    ||||||||||||||||||||||||||||    |||  ||||| |||||||||||| ||||||    
T  482835 aagagtttatggaaataagctgaaaatatcatatgagcatgttataagttgtttccataagc 482774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 21367676 - 21367721
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  21367676 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 21367721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 21574518 - 21574587
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||| ||||||||||||||| |||  || | ||| ||||||||||||||||||  |||||||||| ||||    
T  21574518 agagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaa 21574587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 24887334 - 24887258
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa 289  Q
    |||||||  |||| |||||| ||||||||||||| |||| ||| ||||||||||| ||||||| ||| | ||||||||    
T  24887334 ctatcctggagagcttatgggaataagctgaaaacagttaatg-acatgtcataaattgtttccatacgatctcacaa 24887258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 25459637 - 25459556
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataaaacaat 336  Q
    ||||| |||||  ||||||| ||||||||  |||| | ||||||||||| |||||||| | |||||||||||||||| ||||    
T  25459637 acatgacataatctgtttctctaagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaat 25459556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 29771871 - 29771976
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 324  Q
    ||||||||||||| |||||| |  | ||| ||||||| |||||||||||| |||||||||| ||| | |||||| ||| ||||||  | | |||||| ||    
T  29771871 ttatggaaataagttgaaaacaacttatggacatgtcctaagttgtttctttaagctctcataaatagtctcacgagtatttatgtcagttgataagttc 29771970  T
Q  325 aaataa 330  Q
    ||||||    
T  29771971 aaataa 29771976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 456
Target Start/End: Complemental strand, 36631112 - 36631075
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagc 456  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  36631112 tttttatgagctatattggagaacttatgaaaataagc 36631075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 37273143 - 37273188
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| ||||||||| |||||||||||||||||||||| | ||||||    
T  37273143 ttttcataagctatcttggagaacttatggaaataagttgaaaaca 37273188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 44374680 - 44374639
Alignment:
Q  228 atggaaataagctgaaaatagttcatgtacatgtcataagtt 269  Q
    ||||||||||| ||||||||| | ||||||||||||||||||    
T  44374680 atggaaataaggtgaaaatagcttatgtacatgtcataagtt 44374639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 466201 - 466245
Alignment:
Q  418 atttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    ||||| ||||||||| |||||||||||||| ||||||||| ||||    
T  466201 attttcataagctatgttggagaacttatgaaaataagctaaaaa 466245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 27290952 - 27290880
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    |||||||  |||||| |||||||||||||||||| || | |||  ||||||||||| |||||  |||||||||    
T  27290952 ctatcctgcagagttcatggaaataagctgaaaacagcttatgggcatgtcataagctgttttcataagctct 27290880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 35696247 - 35696283
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    |||||||||||||||||||||||||| || |||||||    
T  35696247 tttttataagctatattggagaacttgtgaaaataag 35696283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 395
Target Start/End: Original strand, 45083049 - 45083085
Alignment:
Q  359 aacttaatttgcagtttatagcataatcacttatcat 395  Q
    ||||||||||||||||||||||||||  |||||||||    
T  45083049 aacttaatttgcagtttatagcataaaaacttatcat 45083085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 47132340 - 47132376
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  47132340 tttttataagctatattggagaagttatgaaaataag 47132376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 331
Target Start/End: Complemental strand, 49605858 - 49605782
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataaa 331  Q
    ||||||||||||||||||| || | ||||| |||| ||||||||||||  ||||||||   ||||| ||||||||||    
T  49605858 acatgtcataagttgtttccatgaactctctcaaacactctcacaagtacttatgctagaagataaactcaaataaa 49605782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 50952347 - 50952387
Alignment:
Q  424 ataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| |||| ||||||| |||||||||||||||||||||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaaca 50952387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 50952361 - 50952413
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    |||| ||||||||||||||| |||| |||| ||| |||||||||||| |||||    
T  50952361 agagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttt 50952413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 331
Target Start/End: Complemental strand, 8420239 - 8420128
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcac-aaaactctcacaagtgtttatgctaatggata 319  Q
    |||| ||||||||||||| ||||||||| |  || |||||||||||| | ||||||||||||||||| || | |||||||||||||||||  ||| ||||    
T  8420239 agagcttatggaaataagttgaaaatagcttgtggacatgtcataagctatttctataagctctcactaacagtctcacaagtgtttatgtcaatagata 8420140  T
Q  320 agctcaaataaa 331  Q
    ||||||||||||    
T  8420139 agctcaaataaa 8420128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 219 - 330
Target Start/End: Complemental strand, 725699 - 725587
Alignment:
Q  219 aaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcac-aaaactctcacaagtgtttatgctaatgga 317  Q
    |||||| ||||||||||||||||||||||||  | | ||||||||||||||||||  |||||||||| | ||   |||||| |||||||||| || | ||    
T  725699 aaagagcttatggaaataagctgaaaatagtctacggacatgtcataagttgttttcataagctctctcgaatgttctcacgagtgtttatgttagttga 725600  T
Q  318 taagctcaaataa 330  Q
    ||| |||||||||    
T  725599 taatctcaaataa 725587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 2455838 - 2455901
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    |||| ||||||||||||| ||||||||||| |||  |||||||||||||||||| |||||||||    
T  2455838 agagcttatggaaataagttgaaaatagtttatgggcatgtcataagttgtttccataagctct 2455901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 284
Target Start/End: Original strand, 4420671 - 4420734
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    |||| |||||||||||||||||||| || | ||| ||||||||||| |||||||||||||||||    
T  4420671 agagcttatggaaataagctgaaaacagcttatgaacatgtcataatttgtttctataagctct 4420734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 7148694 - 7148804
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct-cacaaaactctcacaagtgtttatgctaatggata 319  Q
    |||| ||||| ||||||| ||||||||| | ||| ||| |||||||||||||||  |||||||| |  || ||||||||||||| |||||| | | ||||    
T  7148694 agagcttatgaaaataagttgaaaatagcttatggacaagtcataagttgtttccgtaagctctgctgaacactctcacaagtgcttatgcgactagata 7148793  T
Q  320 agctcaaataa 330  Q
    |||||||||||    
T  7148794 agctcaaataa 7148804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 32578037 - 32577959
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||| |||||  ||||||||||||||||||| || ||| | ||||||||||||||||||  |||||||||| ||||    
T  32578037 ctatcctgaagagcatatggaaataagctgaaaacagctcaaggacatgtcataagttgttttcataagctctctcaaa 32577959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 309
Target Start/End: Complemental strand, 3775162 - 3775081
Alignment:
Q  229 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc-tcacaaaactctcacaagtgtttatg 309  Q
    |||| |||||||||||| |||| ||| |||||||||||| ||||||||||||||| ||  || | |||||||||||||||||    
T  3775162 tggacataagctgaaaacagtttatgcacatgtcataagctgtttctataagctcttccgaatagtctcacaagtgtttatg 3775081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 34538269 - 34538172
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 308  Q
    |||||||| ||||||| |  ||||||||||||||||||| ||| ||||||| |||| ||||| |||||| |||| |||| | ||||||||||| ||||    
T  34538269 ctatcctagagagtttgtataaataagctgaaaatagtttatggacatgtcgtaagctgtttttataagatctctcaaatagtctcacaagtgcttat 34538172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 34939763 - 34939836
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||||||  ||||||||||||||||||||||||| | || ||| |||||||||||| ||||||  |||||||||    
T  34939763 ctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcataagctgtttccgtaagctctc 34939836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 2460158 - 2460083
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    ||||||||||||||||||| |||||||||| |||| | ||||||||||  |||||||| |  ||||||||||||||    
T  2460158 acatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataa 2460083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 8010390 - 8010449
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||| ||||||| |||||||||| | ||| ||||||||| ||||||||||||||||||||    
T  8010390 ttatagaaataaactgaaaatagcttatgaacatgtcatgagttgtttctataagctctc 8010449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 330
Target Start/End: Original strand, 30863273 - 30863384
Alignment:
Q  220 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggat 318  Q
    ||||| |||| ||| ||||||||||| |  | ||||||||||||||||||||||  |||||||||  |||| | ||| |||||||||||||| |||  ||    
T  30863273 aagagcttatagaagtaagctgaaaacaacttatgtacatgtcataagttgttttcataagctctaccaaagagtctaacaagtgtttatgccaataaat 30863372  T
Q  319 aagctcaaataa 330  Q
    | ||||||||||    
T  30863373 aggctcaaataa 30863384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 32917260 - 32917335
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    ||||||||||||||||||| |||||||||| |||| | |||||||||||||||| ||| | | ||||||| |||||    
T  32917260 acatgtcataagttgtttccataagctctcccaaacagtctcacaagtgtttattctagtaggtaagctctaataa 32917335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 29957973 - 29957895
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||| ||| |||| ||||||||||||||||||||||| ||||| ||||||||| |||  || | |||||||||| ||||    
T  29957973 ctattctagagagcttatggaaataagctgaaaatagatcatgaacatgtcatgagtatttcccataagctctctcaaa 29957895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 34939532 - 34939610
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||| ||||| |||||||||||||||||||| |  | | | || |||||||||||||||| |||||||||| ||||    
T  34939532 ctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaa 34939610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 283128 - 283180
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctata 278  Q
    |||| |||||||||||||||||||| ||| |||||||||||| ||||| ||||    
T  283128 ttatagaaataagctgaaaatagtttatggacatgtcataagctgtttttata 283180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 31625009 - 31624957
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||| |||||  ||||||||||||||||||||||| ||||||||| ||||||    
T  31625009 taagccattttcgtaagctatattggagaacttatgaaaataagctgaaaaca 31624957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 32171495 - 32171559
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||| |||||||||||||||||||| |||||||| |  | ||||||||||||||  |||||||||    
T  32171495 agagcttatggaaataagctgaaaacagttcatggaggtatcataagttgtttccttaagctctc 32171559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 290
Target Start/End: Complemental strand, 2027805 - 2027771
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||||||||||||||||||||||||| ||||    
T  2027805 acatgtcataagttgtttctataagctctcccaaa 2027771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 34405130 - 34405203
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaa--tagttcatgtacatgtcataagttgtttctataagctc 283  Q
    ||||||| || ||| ||||| |||||||||||||  ||| | ||| ||||| ||||||||||||||||||||||    
T  34405130 ctatcctgaaaagtgtatgggaataagctgaaaacatagcttatggacatggcataagttgtttctataagctc 34405203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 340
Target Start/End: Complemental strand, 34429678 - 34429636
Alignment:
Q  298 caagtgtttatgctaatggataagctcaaataaaacaatttaa 340  Q
    ||||||||||||||| | |||||||||||||||| ||||||||    
T  34429678 caagtgtttatgctagtagataagctcaaataaaccaatttaa 34429636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 415313 - 415358
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||||||| ||||||||||||||||  ||||| ||||||    
T  415313 tttttataagctatagtggagaacttatggaataaagctgaaaaca 415358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 835310 - 835265
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  835310 ttttcataagctatcttggagaacttatgaaaataagctgaaaaca 835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 284
Target Start/End: Original strand, 3155209 - 3155266
Alignment:
Q  227 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    ||||||||||||||||||| || | ||  |||||||||||||||| | ||||||||||    
T  3155209 tatggaaataagctgaaaacagcttatagacatgtcataagttgtgtatataagctct 3155266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 3775033 - 3774988
Alignment:
Q  235 taagctgaaaatagttcatgtacatgtcataagttgtttctataag 280  Q
    ||||||||||| |||| |||||||||||| ||| ||||||||||||    
T  3775033 taagctgaaaacagtttatgtacatgtcacaagctgtttctataag 3774988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 9668027 - 9667974
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttc 274  Q
    |||| ||||||||||||| |||||| || | ||| |||||||||||||||||||    
T  9668027 agagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttc 9667974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 27595616 - 27595551
Alignment:
Q  214 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 279  Q
    |||||| |||||||| |||||| |  ||||||||| | ||| ||||||||||||||||||| ||||    
T  27595616 atcctagagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataa 27595551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 27693488 - 27693423
Alignment:
Q  214 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 279  Q
    |||||| |||||||| |||||| |  ||||||||| | ||| ||||||||||||||||||| ||||    
T  27693488 atcctagagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataa 27693423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 27909699 - 27909654
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||||||||| || |||||| |||||||||||||||| ||||||    
T  27909699 tttttataagctttactggagagcttatggaaataagctgaaaaca 27909654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 395
Target Start/End: Original strand, 33890666 - 33890711
Alignment:
Q  350 tggacaaataacttaatttgcagtttatagcataatcacttatcat 395  Q
    |||| |||||||||| ||||||| ||||||||||| ||||||||||    
T  33890666 tggataaataacttattttgcagcttatagcataaacacttatcat 33890711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 34544186 - 34544141
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataa 266  Q
    ||||||||| |||||||| ||||||||||| ||| |||||||||||    
T  34544186 agagtttatagaaataagatgaaaatagtttatggacatgtcataa 34544141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 2205632 - 2205569
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||| |||||||||||||||||| |||||| ||  ||||||| ||| ||||||| ||||||||||    
T  2205632 agagcttatggaaataagctgaatatagtttataaacatgtcctaa-ttgtttccataagctctc 2205569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 4420645 - 4420697
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| ||||||  |||||||| ||||||| |||||||||||||||| ||||||    
T  4420645 taagttattttcctaagctatcttggagagcttatggaaataagctgaaaaca 4420697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 7931777 - 7931705
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    |||||||| |||| ||| |||||||||||||||| |  | | | ||||||||||||||||||  |||||||||    
T  7931777 ctatcctacagagcttacggaaataagctgaaaacaacttaagaacatgtcataagttgttttcataagctct 7931705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 9027605 - 9027669
Alignment:
Q  220 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    ||||| ||||| |||||||||||||| |  | ||| |||||||||||||| |||| |||||||||    
T  9027605 aagagcttatgaaaataagctgaaaacaacttatggacatgtcataagttatttccataagctct 9027669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 397
Target Start/End: Complemental strand, 10617081 - 10617049
Alignment:
Q  365 atttgcagtttatagcataatcacttatcatga 397  Q
    |||||||||||||||||||| ||||||||||||    
T  10617081 atttgcagtttatagcataagcacttatcatga 10617049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 32171420 - 32171356
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||||||||||||||||||| |  || || ||||||||| |||||  |||||||||| ||||    
T  32171420 ttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaa 32171356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 34403879 - 34403935
Alignment:
Q  217 ctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    |||||||| ||||||||||||| |||||| |  | ||| ||||||||||||||||||    
T  34403879 ctaaagagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttt 34403935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 8e-19; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 228 - 331
Target Start/End: Original strand, 32172688 - 32172792
Alignment:
Q  228 atggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaa 326  Q
    ||||||||||||||||||| | | ||| ||||||||||||||||||| |||||||||| ||||   ||||||||||| |||||||| |  ||||||||||    
T  32172688 atggaaataagctgaaaatggcttatggacatgtcataagttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataagctcaa 32172787  T
Q  327 ataaa 331  Q
    |||||    
T  32172788 ataaa 32172792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 41052896 - 41052965
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||| ||||||||||||| | ||||||||| ||| |||||||||| ||||||||||||||||||| ||||    
T  41052896 agagcttatggaaataagttaaaaatagtttatgaacatgtcataggttgtttctataagctctcccaaa 41052965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 11457161 - 11457236
Alignment:
Q  256 acatgtcataagttgtttctataagctct-cacaaaactctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    ||||||||||||||||||| ||||||||| || || | |||||||||||||| ||| ||| |||||||||||||||    
T  11457161 acatgtcataagttgtttccataagctcttcaaaacagtctcacaagtgtttctgccaatagataagctcaaataa 11457236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 359 - 409
Target Start/End: Original strand, 30291154 - 30291204
Alignment:
Q  359 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatg 409  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||||    
T  30291154 aacttaatttgcagcttatagcataaacacttatcatgataaacgcttatg 30291204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 330
Target Start/End: Complemental strand, 11297233 - 11297128
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 324  Q
    ||||| ||||||||||||||||| | ||  ||||||| ||||||||||| |||||||||  |||| | ||| |||||||||||||| | | ||||||||     
T  11297233 ttatgaaaataagctgaaaatagctaattgacatgtcttaagttgtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagctt 11297134  T
Q  325 aaataa 330  Q
    ||||||    
T  11297133 aaataa 11297128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 42582914 - 42582966
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  42582914 taagctgtttttgtaagctatattggagaacttatgaaaataagctcaaaaca 42582966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 212 - 326
Target Start/End: Original strand, 17259236 - 17259351
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgc 310  Q
    ||||| || |||||||||||||||||||| | || || |||||  ||||||| |||||||||| | |||||| | ||| || ||||||||||| |||||     
T  17259236 ctatcttagagagtttatggaaataagcttagaacagctcatggtcatgtcaaaagttgtttccaaaagctcactcaacaagtctcacaagtgcttatgt 17259335  T
Q  311 taatggataagctcaa 326  Q
    || | |||||||||||    
T  17259336 tagtagataagctcaa 17259351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 462
Target Start/End: Complemental strand, 12857765 - 12857723
Alignment:
Q  420 ttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||||||||||||||||||||||||| ||||||||| ||||    
T  12857765 ttttataagctatattggagaacttatgaaaataagctgaaaa 12857723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 5963468 - 5963391
Alignment:
Q  350 tggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    |||| ||| ||||||||||||| |||||||||||| || ||||||||| || |||||||||  || |||||| |||||    
T  5963468 tggataaacaacttaatttgcaatttatagcataagcatttatcatgataagcgcttatgtacaaactatttctataa 5963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 330
Target Start/End: Complemental strand, 25720454 - 25720349
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcaca-aaactctcacaagtgtttatgctaatggataagctc 324  Q
    ||||||||||||||| |||  |||| ||| ||||||||| | |||||| ||||||||||| || | | ||||||||||| |||||| | | ||||| |||    
T  25720454 ttatggaaataagctaaaagaagtttatgaacatgtcatgaattgtttttataagctctctcagacagtctcacaagtgcttatgccagtagataacctc 25720355  T
Q  325 aaataa 330  Q
    ||||||    
T  25720354 aaataa 25720349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 4014492 - 4014440
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| |||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  4014492 taagctgttttcataagctatcttggagaacttatgaaaataagctgaaaaca 4014440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 10772055 - 10771987
Alignment:
Q  359 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    |||||||||||||| |||||||||||   |||||||||| |||| | ||||| |||||||||| |||||    
T  10772055 aacttaatttgcagcttatagcataagtgcttatcatgataaacacatatgtataagctatttctataa 10771987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 11700420 - 11700356
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||||||||| |||||| ||||||| || | ||| ||||||||||||||||||| |||| |||||    
T  11700420 agagtttatgaaaataatctgaaaacagcttatggacatgtcataagttgtttccataaactctc 11700356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 365 - 425
Target Start/End: Original strand, 28776874 - 28776934
Alignment:
Q  365 atttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttat 425  Q
    |||||||| ||||||| ||| |||||||||||| ||  |||||||| ||||||||||||||    
T  28776874 atttgcagcttatagcctaagcacttatcatgataagtgcttatgtataagctatttttat 28776934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 331
Target Start/End: Original strand, 6109519 - 6109622
Alignment:
Q  229 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaa 327  Q
    ||||||||||||||||| |  | ||| |||| |||||| || |||| ||||||||||  ||| | |||||||||||||||||| ||| || || ||||||    
T  6109519 tggaaataagctgaaaacaacttatggacatatcataatttttttccataagctctccaaaatattctcacaagtgtttatgccaatagacaaactcaaa 6109618  T
Q  328 taaa 331  Q
    ||||    
T  6109619 taaa 6109622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 462
Target Start/End: Original strand, 1130978 - 1131020
Alignment:
Q  420 ttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    ||||||||||||||||||| |||||||  ||||||||||||||    
T  1130978 ttttataagctatattggaaaacttattaaaataagcttaaaa 1131020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 410 - 464
Target Start/End: Original strand, 1899154 - 1899208
Alignment:
Q  410 tgtaagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| |||| ||||||| |||| ||||||| ||||||||||||||| ||||||    
T  1899154 tgtaagttattcttataagttatactggagaatttatggaaataagctgaaaaca 1899208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 330
Target Start/End: Original strand, 1899186 - 1899291
Alignment:
Q  225 tttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc-tcacaaaactctcacaagtgtttatgctaatggataagct 323  Q
    ||||||||||||||||||||| |  | ||| |||||||||||| ||||| | ||||||| ||| || | |||||||  ||||||||||| |  |||||||    
T  1899186 tttatggaaataagctgaaaacaacttatgcacatgtcataagctgttt-tgtaagctcttcaaaacagtctcacatatgtttatgctagtaaataagct 1899284  T
Q  324 caaataa 330  Q
    |||||||    
T  1899285 caaataa 1899291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 330
Target Start/End: Original strand, 2092423 - 2092497
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||||||| | |||| ||||  |||||||||| || ||||||| ||||||||| | ||||| |||||||||    
T  2092423 acatgtcataagctatttccataacttctcacaaaagtcccacaagtatttatgctagtagataaactcaaataa 2092497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 37611257 - 37611175
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagt 302  Q
    |||| |||||||||||| ||||||| || | ||| |||||||| |||||||||  |||||||||| |||| | ||||||||||    
T  37611257 agagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcacaagt 37611175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 37787987 - 37787905
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagt 302  Q
    |||| |||||||||||| ||||||| || | ||| |||||||| |||||||||  |||||||||| |||| | ||||||||||    
T  37787987 agagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctcacaagt 37787905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 406 - 464
Target Start/End: Original strand, 40590754 - 40590812
Alignment:
Q  406 tatgtgtaagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||| ||||||||||| | ||||||  ||||||| |||||||||||||||| ||||||    
T  40590754 tatgtataagctattttcacaagctaacttggagagcttatggaaataagctcaaaaca 40590812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 427
Target Start/End: Complemental strand, 42573954 - 42573888
Alignment:
Q  361 cttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    |||||||||||| ||||||| | | | |||||||||| || ||||||||| |||||||||| |||||    
T  42573954 cttaatttgcagcttatagcctgagcgcttatcatgataagcgcttatgtataagctatttctataa 42573888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 12242752 - 12242683
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||| |||||||| ||||||||||| |  | |||| ||||||||||||| |||| |||||||||| ||||    
T  12242752 agagcttatggaagtaagctgaaaacaactaatgttcatgtcataagttttttccataagctctctcaaa 12242683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 427
Target Start/End: Complemental strand, 14675086 - 14675009
Alignment:
Q  350 tggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    |||||||| |||||||||||||| |||| ||||||  | ||||||||| ||  ||||||||  ||||||||| |||||    
T  14675086 tggacaaacaacttaatttgcagcttatggcataaatagttatcatgataagtgcttatgtagaagctatttctataa 14675009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 19138759 - 19138714
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataa 266  Q
    |||| |||||||||||||||||||| | || |||||||||||||||    
T  19138759 agagcttatggaaataagctgaaaacaatttatgtacatgtcataa 19138714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 426
Target Start/End: Original strand, 39105363 - 39105424
Alignment:
Q  365 atttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttata 426  Q
    |||||||| |||||||||||   |||||||||| || ||||||||| |||||||||| ||||    
T  39105363 atttgcagcttatagcataagtgcttatcatgataagcgcttatgtataagctatttctata 39105424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 42582231 - 42582272
Alignment:
Q  225 tttatggaaataagctgaaaatagttcatgtacatgtcataa 266  Q
    |||||| ||||||||||||||||||| ||| |||||||||||    
T  42582231 tttatgaaaataagctgaaaatagttaatgaacatgtcataa 42582272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 330
Target Start/End: Complemental strand, 14599372 - 14599304
Alignment:
Q  263 ataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||||||| |||||||||| |||| | ||| |||||||||||||||| |  ||||| ||||||||    
T  14599372 ataagttgtttcgataagctctctcaaacaatcttacaagtgtttatgctagtaaataagttcaaataa 14599304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 308
Target Start/End: Original strand, 19177008 - 19177104
Alignment:
Q  213 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 308  Q
    |||||||||||  ||||||||||||| | ||||||| | ||| |||||||||  |||||||  || ||||||| |||| | ||| ||||||||||||    
T  19177008 tatcctaaagatcttatggaaataaggtaaaaatagcttatggacatgtcatcggttgttttcattagctctctcaaacaatctgacaagtgtttat 19177104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 220 - 248
Target Start/End: Original strand, 29588906 - 29588934
Alignment:
Q  220 aagagtttatggaaataagctgaaaatag 248  Q
    |||||||||||||||||||||||||||||    
T  29588906 aagagtttatggaaataagctgaaaatag 29588934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 447
Target Start/End: Original strand, 32009701 - 32009729
Alignment:
Q  419 tttttataagctatattggagaacttatg 447  Q
    |||||||||||||||||||||||||||||    
T  32009701 tttttataagctatattggagaacttatg 32009729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 34160733 - 34160785
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||| || || ||| |||||||||||||| ||||||||| ||||||    
T  34160733 taagctattttcattagatatcttggagaacttatgaaaataagctgaaaaca 34160785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 36638767 - 36638819
Alignment:
Q  213 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcata 265  Q
    ||||||| |||| |||||||||||||||||||| || | ||| ||||||||||    
T  36638767 tatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgtcata 36638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 37954695 - 37954731
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    |||||||||||||||||||||||| |||| |||||||    
T  37954695 tttttataagctatattggagaacatatgaaaataag 37954731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 329
Target Start/End: Original strand, 38728435 - 38728539
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 324  Q
    |||||||||||||||||||| || | | |  ||||||||||| | |||  |||||||||| |||| | || |||| |||||||| | ||| |||||||||    
T  38728435 ttatggaaataagctgaaaacagcttaggagcatgtcataagctattttcataagctctcccaaacaatcacacaggtgtttataccaatagataagctc 38728534  T
Q  325 aaata 329  Q
    |||||    
T  38728535 aaata 38728539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 427
Target Start/End: Original strand, 41819505 - 41819573
Alignment:
Q  359 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    |||||||||| ||| ||||||||||| ||||||||||||  | || || ||| |||||||||| |||||    
T  41819505 aacttaatttacagcttatagcataaacacttatcatgatgagcggttttgtataagctatttctataa 41819573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 455
Target Start/End: Complemental strand, 42500298 - 42500266
Alignment:
Q  423 tataagctatattggagaacttatggaaataag 455  Q
    ||||||||||||||||||||||||| |||||||    
T  42500298 tataagctatattggagaacttatgaaaataag 42500266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 1e-17; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 290
Target Start/End: Complemental strand, 1742087 - 1742005
Alignment:
Q  208 taatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||||| | ||||||||||||||||||| |||| |||| | ||| ||||||||||||||||||| |||||||||| ||||    
T  1742087 taatctatcatgaagagtttatggaaataagttgaagatagcttatgcacatgtcataagttgtttccataagctctcccaaa 1742005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 32821828 - 32821900
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    ||||||||||||| |||| ||||||| ||||||| || | ||| |||||||||||||||||||||||| ||||    
T  32821828 ctatcctaaagagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactct 32821900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 280
Target Start/End: Complemental strand, 27237935 - 27237876
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataag 280  Q
    |||||||||||||||||||| |||| || | |||||||||||||||| ||||||||||||    
T  27237935 agagtttatggaaataagctaaaaacagcttatgtacatgtcataagctgtttctataag 27237876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 412 - 457
Target Start/End: Complemental strand, 6167351 - 6167306
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagct 457  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||    
T  6167351 taagctgtttttataagctattttggagaacttatggaaataagct 6167306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 9996803 - 9996876
Alignment:
Q  258 atgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||||||||||||||||||||||| |||  | ||||||||||  |||||||| | |||||||||||||||    
T  9996803 atgtcataagttgtttctataagctctcccaagcagtctcacaagtacttatgctagttgataagctcaaataa 9996876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 282
Target Start/End: Complemental strand, 34652078 - 34652017
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 282  Q
    |||| ||||||||||||| |||||| || | ||| |||||||||||||||||||||||||||    
T  34652078 agagcttatggaaataagttgaaaacagcttatggacatgtcataagttgtttctataagct 34652017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 43065492 - 43065424
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa 289  Q
    |||| |||| ||||||||||||||| | || ||| ||||||||||||||||||  ||||||||||||||    
T  43065492 agagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctcacaa 43065424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 9595291 - 9595338
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    ||||| ||||||||||||||||||||||| |||||||||||| |||||    
T  9595291 ttatgaaaataagctgaaaatagttcatggacatgtcataagatgttt 9595338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 15120222 - 15120321
Alignment:
Q  232 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    ||||||||| |||| || | ||| ||||||||||||||||||| |||||||||| |||| |   |||||| ||||||||||| | |||||| ||||||||    
T  15120222 aaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacagattcacaactgtttatgctagtagataagttcaaataa 15120321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 30331762 - 30331804
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataa 454  Q
    ||||||||||||||||| |||||||||||||||||| ||||||    
T  30331762 taagctatttttataagatatattggagaacttatgaaaataa 30331804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 41042064 - 41042006
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 279  Q
    |||||||||||||||||| |||||| || | ||| |||||| |||||||||||||||||    
T  41042064 agagtttatggaaataagttgaaaacagctgatggacatgtaataagttgtttctataa 41042006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 15967718 - 15967755
Alignment:
Q  242 aaaatagttcatgtacatgtcataagttgtttctataa 279  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  15967718 aaaatagttcatgaacatgtcataagttgtttctataa 15967755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 41809282 - 41809197
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgc 310  Q
    ||||||||||||||| |||| |  | ||| ||||||||||||||||||| | ||||||| ||||  | ||||||||||||||||||    
T  41809282 ttatggaaataagctaaaaacaacttatgaacatgtcataagttgtttccacaagctcttacaatcagtctcacaagtgtttatgc 41809197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 407 - 464
Target Start/End: Original strand, 41817165 - 41817222
Alignment:
Q  407 atgtgtaagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||||||||||||| |||| ||||  |||||| |||||||||||||||| ||||||    
T  41817165 atgtgtaagctattttcataaactatcctggagagcttatggaaataagctgaaaaca 41817222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 3078708 - 3078656
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| |||||||||||||| ||||||| ||| |||||||||||| ||||||    
T  3078708 taagctgtttttataagctatcttggagagcttctggaaataagctaaaaaca 3078656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 16398116 - 16398168
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||| ||||| ||| |||||||||||||| ||||||||| ||||||    
T  16398116 taagctattttcataagttatgttggagaacttatgaaaataagctgaaaaca 16398168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 18884900 - 18884964
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||||||| ||||||| || | ||| | |||||||||| ||||||||||||||||| ||||    
T  18884900 ttatggaaataatctgaaaacagctaatggaaatgtcataagctgtttctataagctctcccaaa 18884964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 308
Target Start/End: Complemental strand, 31228879 - 31228791
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 308  Q
    ||||||||||||||||| || |||| || | || |||||||||||| ||||||  |||||| ||| |||| | ||||||||||||||||    
T  31228879 agagtttatggaaataacctaaaaacagcttatatacatgtcataaattgtttgaataagcactcccaaacagtctcacaagtgtttat 31228791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 787363 - 787450
Alignment:
Q  224 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 310  Q
    ||||||||| |||||||||||| || | ||| |||||||||||| |||||  ||||| ||||||||| | | ||||||||| ||||||    
T  787363 gtttatggagataagctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgc 787450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 5781688 - 5781743
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataag 267  Q
    ||||| || |||| |||||||||||||||||||| |||| ||| ||||||||||||    
T  5781688 ctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataag 5781743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 283
Target Start/End: Complemental strand, 30538204 - 30538153
Alignment:
Q  232 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc 283  Q
    |||||||||||||| |  | ||| ||||||||||||||||||||||||||||    
T  30538204 aaataagctgaaaacaacttatggacatgtcataagttgtttctataagctc 30538153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 309
Target Start/End: Complemental strand, 43456743 - 43456660
Alignment:
Q  227 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 309  Q
    ||||||||||||||||||| |||| ||| ||||||||| ||||||||  | |||||||  |||| | ||| |||||||||||||    
T  43456743 tatggaaataagctgaaaacagtttatggacatgtcatgagttgttttcacaagctctttcaaacagtcttacaagtgtttatg 43456660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 2410087 - 2410018
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaa 291  Q
    |||| ||||||||||||||||||||||| | ||| ||||| ||||||| ||||| || || ||||||||||    
T  2410087 agagcttatggaaataagctgaaaatagct-atgaacatgccataagtggtttccattagttctcacaaaa 2410018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Original strand, 5133800 - 5133858
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 279  Q
    |||| ||||||||||||||||||| ||| | |||  ||||||||||||||||| |||||    
T  5133800 agagcttatggaaataagctgaaagtagcttatgaccatgtcataagttgtttttataa 5133858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 359 - 421
Target Start/End: Original strand, 9833048 - 9833110
Alignment:
Q  359 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctattt 421  Q
    |||||||||| ||| ||||||||||| || ||||||||| |||| ||||||| ||| ||||||    
T  9833048 aacttaatttacagcttatagcataagcatttatcatgataaacacttatgtataatctattt 9833110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 12464541 - 12464491
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    ||||||||||| ||||||||| ||||||||||| || ||||||||| ||||    
T  12464541 taagctattttcataagctatcttggagaacttgtgaaaataagctgaaaa 12464491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 293 - 331
Target Start/End: Original strand, 14302923 - 14302961
Alignment:
Q  293 tctcacaagtgtttatgctaatggataagctcaaataaa 331  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  14302923 tctcacaaatgtttatgctaatagataagctcaaataaa 14302961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 462
Target Start/End: Complemental strand, 22971550 - 22971508
Alignment:
Q  420 ttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    ||||||||||||||||||| |||||||  ||||||||||||||    
T  22971550 ttttataagctatattggaaaacttattaaaataagcttaaaa 22971508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 323
Target Start/End: Original strand, 24098130 - 24098231
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataa 320  Q
    |||| |||||||||||||||||||| |||| |||  ||||| || | |||||||| |||||||||| || | | | ||||||| |||||||| | |||||    
T  24098130 agagcttatggaaataagctgaaaacagtttatgggcatgttattaattgtttctgtaagctctca-aatagttttacaagtgcttatgctactagataa 24098228  T
Q  321 gct 323  Q
    |||    
T  24098229 gct 24098231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 29316843 - 29316793
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||| |||| || |||||| |||||||||||||||||||||||| ||||    
T  29316843 taagctgttttcatcagctatcttggagaacttatggaaataagctgaaaa 29316793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 1741569 - 1741532
Alignment:
Q  208 taatctatcctaaagagtttatggaaataagctgaaaa 245  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  1741569 taatttatcctgaagagtttatggaaataagctgaaaa 1741532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 29429808 - 29429711
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 308  Q
    |||||||||| |  ||||| ||||| |||||||| || |  || | ||||||| |||||||||||||||||||| |||| | ||||||||||| ||||    
T  29429808 ctatcctaaataagttatgaaaatatgctgaaaacagctagtgaatatgtcattagttgtttctataagctctcccaaacagtctcacaagtgcttat 29429711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 35555155 - 35555224
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||| ||||||||||||||||||||||| |||  ||||| ||||  |||||  |||||||||| ||||    
T  35555155 agagttgatggaaataagctgaaaatagtttatgatcatgtaataatctgttttcataagctctctcaaa 35555224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 38388719 - 38388784
Alignment:
Q  226 ttatggaaataagctgaaaat-agttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||||||||||||||||  |||| ||| ||||||||||||||||| | ||||| |||| ||||    
T  38388719 ttatggaaataagctgaaaaacagtttatgaacatgtcataagttgttaccataagttctcccaaa 38388784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 40279276 - 40279321
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| |||||||||||||||||||||||| |||| |||| ||||||    
T  40279276 ttttcataagctatattggagaacttatgaaaattagctgaaaaca 40279321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 40279346 - 40279391
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| |||||||||||||||||||||||| |||| |||| ||||||    
T  40279346 ttttcataagctatattggagaacttatgaaaattagctgaaaaca 40279391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 40279416 - 40279461
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| |||||||||||||||||||||||| ||||||| | ||||||    
T  40279416 ttttcataagctatattggagaacttatgaaaataagttgaaaaca 40279461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 43173231 - 43173276
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||||| ||||| ||||||| |||||||||||||| ||||||||    
T  43173231 tttttataggctatcttggagatcttatggaaataagtttaaaaca 43173276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 680505 - 680557
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||| ||||||||| ||| ||||||| || ||||||||| ||||||    
T  680505 taagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaaca 680557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 750684 - 750724
Alignment:
Q  424 ataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||| |||||||||||||| ||||||||| ||||||    
T  750684 ataagctatcttggagaacttatgcaaataagctcaaaaca 750724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 4550796 - 4550844
Alignment:
Q  242 aaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||| | ||| ||||||||||||||||||| |||||||||| ||||    
T  4550796 aaaatagcttatgaacatgtcataagttgtttccataagctctcccaaa 4550844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 10198535 - 10198479
Alignment:
Q  208 taatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcat 264  Q
    |||||||||||| |||| ||||||||||||||||| || || | ||| |||||||||    
T  10198535 taatctatcctagagagattatggaaataagctgacaacagcttatgaacatgtcat 10198479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 20952364 - 20952400
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  20952364 tttttattagctatattggagaacttatgaaaataag 20952400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 330
Target Start/End: Original strand, 22878164 - 22878236
Alignment:
Q  259 tgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||| ||||||| ||||| |||| |||| | ||||||||||| |||||  | |||||||||||||||||    
T  22878164 tgtcataatttgtttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataa 22878236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 410 - 462
Target Start/End: Complemental strand, 26143710 - 26143658
Alignment:
Q  410 tgtaagctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||||| |||| ||||||||  |||||||||||||| ||||||||| ||||    
T  26143710 tgtaagctgttttcataagctaacttggagaacttatgaaaataagctgaaaa 26143658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 26202037 - 26202073
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    |||||||||| |||||||||||||||||| |||||||    
T  26202037 tttttataagatatattggagaacttatgaaaataag 26202073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 27695663 - 27695619
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagc 456  Q
    |||||| ||||||||||||||||||| |||||| || ||||||||    
T  27695663 taagctgtttttataagctatattggggaacttgtgaaaataagc 27695619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 31740014 - 31739954
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagc 281  Q
    |||| |||||||||||| ||||||| || | |||  |||||||| ||||||||||||||||    
T  31740014 agagcttatggaaataatctgaaaacagcttatgatcatgtcatgagttgtttctataagc 31739954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 32592595 - 32592631
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  32592595 tttttataagcaatattggagaacttatgaaaataag 32592631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 291
Target Start/End: Original strand, 33256774 - 33256838
Alignment:
Q  227 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaa 291  Q
    |||| ||||||||||| || |||| ||| |||||||||||| |||||  |||||||||| |||||    
T  33256774 tatgaaaataagctgagaacagtttatgaacatgtcataagctgttttcataagctctcccaaaa 33256838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 269
Target Start/End: Original strand, 36852500 - 36852548
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagtt 269  Q
    |||| |||||||||||| |||||||||||| ||  ||||||||||||||    
T  36852500 agagcttatggaaataatctgaaaatagtttatagacatgtcataagtt 36852548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 37186354 - 37186294
Alignment:
Q  225 tttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||| ||||||| |||||||| || |||   |||||||||||||||||||||||| |||||    
T  37186354 tttacggaaatatgctgaaaacagctcacagacatgtcataagttgtttctataatctctc 37186294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 456
Target Start/End: Original strand, 40835542 - 40835574
Alignment:
Q  424 ataagctatattggagaacttatggaaataagc 456  Q
    |||||||||||||||||||||||| ||||||||    
T  40835542 ataagctatattggagaacttatgaaaataagc 40835574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 43279590 - 43279554
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    |||||||||||||||||||||||||| || |||||||    
T  43279590 tttttataagctatattggagaacttgtgaaaataag 43279554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 5e-17; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 214 - 330
Target Start/End: Original strand, 11264322 - 11264439
Alignment:
Q  214 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgcta 312  Q
    |||||| |||| ||||||||||||| |||||| |||| ||| ||||||||||||||| ||||||| |||||| |||| | |||||||  |||||||||||    
T  11264322 atcctagagagcttatggaaataagttgaaaacagtttatggacatgtcataagttgattctatatgctctcccaaacagtctcacagatgtttatgcta 11264421  T
Q  313 atggataagctcaaataa 330  Q
     | ||||  |||||||||    
T  11264422 gtagatagactcaaataa 11264439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 6987792 - 6987714
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||  |||| ||||||||||||| ||||||||||| ||| |||||||||||||||| || |||||||||| ||||    
T  6987792 ctatcctggagagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaa 6987714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 290
Target Start/End: Original strand, 10812539 - 10812605
Alignment:
Q  224 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||| ||||||||||||||||| |||||||||||||| || |||||||||| |||||||||| ||||    
T  10812539 gtttttggaaataagctgaaaacagttcatgtacatgacaaaagttgtttccataagctctctcaaa 10812605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 212 - 282
Target Start/End: Complemental strand, 29467675 - 29467605
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 282  Q
    |||||||| ||||||||||||||||||||||||| || | ||| ||||||||||||  |||||||||||||    
T  29467675 ctatcctagagagtttatggaaataagctgaaaacagcttatggacatgtcataagccgtttctataagct 29467605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 330
Target Start/End: Complemental strand, 24371004 - 24370883
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatg--tacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 308  Q
    |||||||||| ||||||| |||||||||||||||  | | |||  |||||||||||||||||||| ||||| | |  |||| | ||||||| ||| ||||    
T  24371004 ctatcctaaatagtttatagaaataagctgaaaacggcttatgtatacatgtcataagttgtttccataagttttatcaaacattctcacatgtgcttat 24370905  T
Q  309 gctaatggataagctcaaataa 330  Q
    || ||| |||||||||||||||    
T  24370904 gcgaatagataagctcaaataa 24370883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 336
Target Start/End: Complemental strand, 19394814 - 19394689
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 310  Q
    |||| ||| |||| |||||||||||||||| |   || | |||||||||| ||||||||||||||||||||||  |||| | |||||||||||||| |||    
T  19394814 ctatactagagagcttatggaaataagctgtattcagcttatgtacatgtaataagttgtttctataagctctggcaaacagtctcacaagtgtttttgc 19394715  T
Q  311 taatggataagctcaaataaaacaat 336  Q
    |  | | ||| |||||||||| ||||    
T  19394714 tcgtagttaaactcaaataaatcaat 19394689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 27123359 - 27123284
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    ||||||||||||||||||| |||||||||| |||| | ||||||||||  |||||||| |  ||||||||||||||    
T  27123359 acatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagtttataagctcaaataa 27123284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 2874661 - 2874607
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataag 280  Q
    |||||||||||||| |||||||| | ||| ||||||||||||||||||| |||||    
T  2874661 ttatggaaataagcggaaaatagattatggacatgtcataagttgtttccataag 2874607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 230 - 330
Target Start/End: Complemental strand, 3637416 - 3637310
Alignment:
Q  230 ggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actc-----tcacaagtgtttatgctaatggataagct 323  Q
    |||||||||||||||| |||| ||| | |||||| ||||||||| |||  |||||||||||  |||     ||| |||||||||||||||| ||||||||    
T  3637416 ggaaataagctgaaaacagtttatgaatatgtcacaagttgtttttattcgctctcacaaagtctcataagtcataagtgtttatgctaatagataagct 3637317  T
Q  324 caaataa 330  Q
    |||||||    
T  3637316 caaataa 3637310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 6979011 - 6978945
Alignment:
Q  214 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataag 280  Q
    ||||||||||||||||| |||||||||||||| || | ||  |||||||||||||| |||| |||||    
T  6979011 atcctaaagagtttatgaaaataagctgaaaacagcttatagacatgtcataagttatttcaataag 6978945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 290
Target Start/End: Original strand, 27725230 - 27725311
Alignment:
Q  209 aatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||| | ||| | |||||||||| |  ||||||||||| ||| |||||||||||||| |||| |||||||||| ||||    
T  27725230 aatctatcttgaagtgcttatggaaatcatttgaaaatagtttatggacatgtcataagttatttccataagctctctcaaa 27725311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 28406939 - 28407004
Alignment:
Q  220 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    ||||| |||||||||||||||| |||||||| ||| | ||||||| |||||||||  |||||||||    
T  28406939 aagagcttatggaaataagctgcaaatagtttatgaatatgtcatgagttgtttccgtaagctctc 28407004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 415
Target Start/End: Original strand, 50298415 - 50298480
Alignment:
Q  350 tggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaag 415  Q
    |||| ||| ||||||||||| || ||||||||||| |||||||||||| ||| |||||||| ||||    
T  50298415 tggataaacaacttaatttgaagcttatagcataaacacttatcatgataaatgcttatgtataag 50298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 1312869 - 1312921
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    ||||||||||||||||||||||||| |||| ||| | |||| |||||||||||    
T  1312869 agagtttatggaaataagctgaaaacagtttatgaatatgtaataagttgttt 1312921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 17975437 - 17975385
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| |||||||||||||| ||||||| ||| |||||||||||| ||||||    
T  17975437 taagctgtttttataagctatcttggagagcttctggaaataagctaaaaaca 17975385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 212 - 284
Target Start/End: Original strand, 21157787 - 21157859
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    ||||||| ||||| ||||||||||||||| |||| || |  |||| |||||||||| ||||||| ||||||||    
T  21157787 ctatcctgaagagcttatggaaataagctaaaaacagcttttgtaaatgtcataagctgtttctgtaagctct 21157859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 45128347 - 45128283
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||||||||||||||| || ||||| |||||  || ||||||||| |||||||||| ||||    
T  45128347 ttatggaaataagctgaaaacagctcatggacatgatatcagttgtttccataagctctctcaaa 45128283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 454
Target Start/End: Complemental strand, 26925 - 26890
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataa 454  Q
    ||||||||||||||||||||||||||||| ||||||    
T  26925 tttttataagctatattggagaacttatgaaaataa 26890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 454
Target Start/End: Original strand, 9760449 - 9760484
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataa 454  Q
    ||||||||||||||||||||||||||||| ||||||    
T  9760449 tttttataagctatattggagaacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 285
Target Start/End: Complemental strand, 41097285 - 41097234
Alignment:
Q  234 ataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    ||||| ||||||||| | ||| ||||||||| ||||||||||||||||||||    
T  41097285 ataagttgaaaatagcttatggacatgtcattagttgtttctataagctctc 41097234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 290
Target Start/End: Complemental strand, 7749098 - 7749064
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||||||||||||||| |||||||||||||||    
T  7749098 acatgtcataagttgtttccataagctctcacaaa 7749064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 21952967 - 21953045
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||| |||| ||| |||||||| || |||| || | ||| |||||||||||||| |||| |||||||||| ||||    
T  21952967 ctatcctatagagcttaaggaaataaactaaaaacaggttatggacatgtcataagttctttccataagctctcccaaa 21953045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 25896819 - 25896922
Alignment:
Q  232 aaataagctgaaaatagttcatgta----catgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaa 326  Q
    |||||||||||||| |||| |||||    ||||||||||| | |||||||||||||||  ||| | ||||||||||| | |||||| | ||||| |||||    
T  25896819 aaataagctgaaaacagtttatgtatggacatgtcataagctatttctataagctctcctaaacagtctcacaagtgctaatgctagtagataaactcaa 25896918  T
Q  327 ataa 330  Q
    ||||    
T  25896919 ataa 25896922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 825551 - 825506
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| ||||||||| |||||||||||||| ||||||||| ||||||    
T  825551 ttttcataagctattttggagaacttatgaaaataagctgaaaaca 825506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 2592366 - 2592325
Alignment:
Q  423 tataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||||||| ||||||| |||||||||||||||| ||||||    
T  2592366 tataagctattttggagagcttatggaaataagctgaaaaca 2592325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 6466097 - 6466036
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    |||| ||| |||| ||||||||||||| ||||||||| | ||| |||| |||||||||||||    
T  6466097 ctattctagagagattatggaaataagttgaaaatagcttatgaacatctcataagttgttt 6466036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 18628555 - 18628486
Alignment:
Q  261 tcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaata 329  Q
    |||||||||||||  |||||||||| |||| | |||||||||||||||||  | | ||||||||||||||    
T  18628555 tcataagttgttttcataagctctcccaaacagtctcacaagtgtttatgtcagtagataagctcaaata 18628486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 329
Target Start/End: Complemental strand, 21593045 - 21592941
Alignment:
Q  224 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataagct 323  Q
    |||||||||||||||||||||  || | ||  |||||||||||| || ||| |||||||||| ||||| ||| |||| ||| | | ||| | ||||||||    
T  21593045 gtttatggaaataagctgaaagcagcttataaacatgtcataagctgcttcaataagctctcccaaaa-tcttacaaatgtatgtactagtagataagct 21592947  T
Q  324 caaata 329  Q
    ||||||    
T  21592946 caaata 21592941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 23676706 - 23676751
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||||||| | || | |||||||||||||||||||||||    
T  23676706 tttttataagctatacttgaaagcttatggaaataagcttaaaaca 23676751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 336
Target Start/End: Original strand, 44319968 - 44320093
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 310  Q
    |||||||| |||  ||||| |||| || ||||||||| | ||| | |  |||||| ||||||  |||||||||| |||| | |||||||| |||||||||    
T  44319968 ctatcctagagaacttatgaaaattagttgaaaatagctaatggatacatcataatttgttttcataagctctcccaaacagtctcacaattgtttatgc 44320067  T
Q  311 taatggataagctcaaataaaacaat 336  Q
     ||| | |||||||||||||| ||||    
T  44320068 caataggtaagctcaaataaaccaat 44320093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 455
Target Start/End: Original strand, 2244064 - 2244096
Alignment:
Q  423 tataagctatattggagaacttatggaaataag 455  Q
    ||||||||||||||||||||||||| |||||||    
T  2244064 tataagctatattggagaacttatgaaaataag 2244096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 331
Target Start/End: Original strand, 2841657 - 2841765
Alignment:
Q  224 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagc 322  Q
    ||||||||| |||||||||||| |  | ||  ||||||||||||||| ||  |||| ||||| |||| | |||||| ||| ||||||  ||||||||| |    
T  2841657 gtttatggatataagctgaaaacaacttattgacatgtcataagttgctttcataaactctcgcaaacaatctcacgagtttttatgtcaatggataaac 2841756  T
Q  323 tcaaataaa 331  Q
    |||||||||    
T  2841757 tcaaataaa 2841765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 227 - 330
Target Start/End: Original strand, 2996607 - 2996711
Alignment:
Q  227 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctca 325  Q
    |||| ||||||| |||||| || | ||| ||||||||||||||||||  |||||||||| |||| | ||||| ||||| |||||  |||  ||||| |||    
T  2996607 tatgaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgtcaataaataagttca 2996706  T
Q  326 aataa 330  Q
    |||||    
T  2996707 aataa 2996711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 6364151 - 6364203
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||| ||||| |||||||||| ||||||||||| | ||||||||| ||||||    
T  6364151 taagcaattttcataagctataatggagaacttacgaaaataagctgaaaaca 6364203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 14011248 - 14011288
Alignment:
Q  424 ataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  14011248 ataagctatcttggagagcttatggaaataagctgaaaaca 14011288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 359 - 427
Target Start/End: Complemental strand, 17751299 - 17751231
Alignment:
Q  359 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    ||||||| |||||| ||||||||||| ||||| | |||| || ||||||| | |||||||||| |||||    
T  17751299 aacttaaattgcagcttatagcataagcacttgtaatgataagcgcttatttataagctatttctataa 17751231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 418
Target Start/End: Complemental strand, 22539232 - 22539165
Alignment:
Q  350 tggacaaataacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagcta 418  Q
    |||| |||||||||| ||||||| ||||||||||| | |||||||||| || || |||||| |||||||    
T  22539232 tggataaataactta-tttgcaggttatagcataagcccttatcatgacaagcgtttatgtataagcta 22539165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 28614859 - 28614787
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    |||||||| |||  ||||| |||||||||||||| || | ||| | ||||||||| ||||||| |||||||||    
T  28614859 ctatcctagagaacttatgaaaataagctgaaaagagcttatggatatgtcataaattgtttccataagctct 28614787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 33587016 - 33586980
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    |||||||||||||||| |||||||||||| |||||||    
T  33587016 tttttataagctatatcggagaacttatgaaaataag 33586980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 46588134 - 46588098
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    |||||||||| |||||||||||||||||| |||||||    
T  46588134 tttttataagttatattggagaacttatgaaaataag 46588098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 46592270 - 46592234
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    |||||||||| |||||||||||||||||| |||||||    
T  46592270 tttttataagttatattggagaacttatgaaaataag 46592234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 49032087 - 49032031
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 282  Q
    ||||||||||||| |||||| |  | ||| |||||||||||| ||||||||||||||    
T  49032087 ttatggaaataagatgaaaacaaataatggacatgtcataagatgtttctataagct 49032031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 49940237 - 49940193
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagc 456  Q
    |||||| ||||||||||||| || |||||||||| ||||||||||    
T  49940237 taagctgtttttataagctacatcggagaacttacggaaataagc 49940193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 51630113 - 51630165
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||| ||||||||| ||| |||| ||||| ||||||||| ||||||    
T  51630113 taagctattttcataagctatcttgaagaatttatgaaaataagctgaaaaca 51630165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 224 - 330
Target Start/End: Complemental strand, 30191180 - 30191073
Alignment:
Q  224 gtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagc 322  Q
    |||||||||||||||||||||| |  |  || ||||||||||||||||||| |||||||||| |||| | ||| ||||||| |||||| ||| ||||| |    
T  30191180 gtttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtctaacaagtgcttatgccaatagataaac 30191081  T
Q  323 tcaaataa 330  Q
    ||||||||    
T  30191080 tcaaataa 30191073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 213 - 330
Target Start/End: Original strand, 6950342 - 6950460
Alignment:
Q  213 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgct 311  Q
    |||||||||||| |||||||||||||||||||| |  | ||  |||||||||| |||||||  |||||||||| |||| | |||||||| |||||||||     
T  6950342 tatcctaaagagcttatggaaataagctgaaaacaacttatcgacatgtcataggttgtttacataagctctcccaaacaatctcacaaatgtttatgcc 6950441  T
Q  312 aatggataagctcaaataa 330  Q
    | | ||||| |||||||||    
T  6950442 agtagataaactcaaataa 6950460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 212 - 310
Target Start/End: Original strand, 14949885 - 14949984
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 310  Q
    ||||||||||||| |||| ||||||||||||||| || | ||| |||||||||||||| |||  ||||||||||  ||| | |||||||| |||||||||    
T  14949885 ctatcctaaagagattatagaaataagctgaaaacagcttatggacatgtcataagttattttcataagctctcctaaacagtctcacaaatgtttatgc 14949984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 9700029 - 9700139
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggata 319  Q
    |||| ||||| ||||||| |||||| || | ||| ||||||||||| ||| ||  | |||||||| |||| | |||||||||||||||||||| | ||||    
T  9700029 agagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatgctagtagata 9700128  T
Q  320 agctcaaataa 330  Q
    |||||||||||    
T  9700129 agctcaaataa 9700139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 37740462 - 37740405
Alignment:
Q  227 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||| |||| |||||    
T  37740462 tatggaaataagctgaaaatagtt-atggacatgtcataagttgtttccataaactctc 37740405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 290
Target Start/End: Complemental strand, 4055658 - 4055589
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||| ||| |||||||||||||||| |||| ||| |||||||||||||| ||||||||| ||||| ||||    
T  4055658 agagcttaaggaaataagctgaaaacagtttatggacatgtcataagttatttctataaactctcccaaa 4055589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 290
Target Start/End: Original strand, 8558688 - 8558757
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||| ||||| |||||| |||||||||||| ||| |||||||| |||||||||| |||||||||| ||||    
T  8558688 agagcttatgaaaataatctgaaaatagttgatggacatgtcacaagttgtttccataagctctcccaaa 8558757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 43504760 - 43504805
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||    
T  43504760 tttttataagctatcttggagaacttatggaaataagctgaaaaca 43504805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 7008632 - 7008736
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataagctca 325  Q
    ||||| ||||||||| ||||||  | | | |||||||||| ||||||||||||||||||| | ||  ||||||||||| |||||| | | ||||| ||||    
T  7008632 ttatgaaaataagctaaaaatatcttaaggacatgtcataggttgtttctataagctctctctaacgtctcacaagtgcttatgccagtagataaactca 7008731  T
Q  326 aataa 330  Q
    |||||    
T  7008732 aataa 7008736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 330
Target Start/End: Complemental strand, 43368748 - 43368632
Alignment:
Q  215 tcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgctaa 313  Q
    |||||||||||| ||| ||||||| ||||||||| | ||| ||||||||||||||||||  ||||||| | ||||  | |||||||| || ||||| ||     
T  43368748 tcctaaagagttcatgaaaataagttgaaaatagctaatgaacatgtcataagttgttttcataagctgttacaaccagtctcacaaatgcttatgttag 43368649  T
Q  314 tggataagctcaaataa 330  Q
    | |||||| ||||||||    
T  43368648 tagataagatcaaataa 43368632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 43704426 - 43704363
Alignment:
Q  213 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttcta 276  Q
    |||||| || || ||||||||||||||| |||| |||| ||| |||||||||||||||||||||    
T  43704426 tatcctcaaaagcttatggaaataagcttaaaacagtttatgaacatgtcataagttgtttcta 43704363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 290
Target Start/End: Complemental strand, 6509354 - 6509276
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||  |||| |||| |||||||| ||||||||||| ||   ||||||||||| ||||||||||||||||| ||||    
T  6509354 ctatcctggagagcttattgaaataaggtgaaaatagtttataggcatgtcataagctgtttctataagctctctcaaa 6509276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 312
Target Start/End: Complemental strand, 31875651 - 31875545
Alignment:
Q  207 ttaatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtt 305  Q
    |||| ||||| | ||||| ||||| ||||||| ||||||| | | ||| ||||||||||||||||||| ||||||| || |||| | | |||| ||||||    
T  31875651 ttaaactatcttcaagagcttatgaaaataagttgaaaatggcttatggacatgtcataagttgtttccataagctttctcaaacagtgtcactagtgtt 31875552  T
Q  306 tatgcta 312  Q
    |||||||    
T  31875551 tatgcta 31875545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 24258085 - 24258146
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    ||||||||||||||||||| ||||||||| ||||||    ||||||||||||||| ||||||    
T  24258085 ctatcctaaagagtttatgtaaataagcttaaaataacctatgtacatgtcataaattgttt 24258146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 326
Target Start/End: Original strand, 44401594 - 44401694
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 324  Q
    |||||||||||||||||||| | |  ||| ||||||| |||||||||||||||| || || |||| | |||||||||||| ||||| | | |||||||||    
T  44401594 ttatggaaataagctgaaaacaatgtatgaacatgtc-taagttgtttctataaactatcccaaacagtctcacaagtgtatatgccagtagataagctc 44401692  T
Q  325 aa 326  Q
    ||    
T  44401693 aa 44401694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 2091831 - 2091907
Alignment:
Q  261 tcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataaaacaat 336  Q
    ||||||||||||| | | ||||||| |||| | |||||||||||||||||| | |||||||| ||||||||| ||||    
T  2091831 tcataagttgtttttgtgagctctctcaaacaatctcacaagtgtttatgccattggataagatcaaataaatcaat 2091907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 11183573 - 11183637
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||| |||||||||||||||||||| || | ||  |||| ||||||||||||| |||||||||||    
T  11183573 agagcttatggaaataagctgaaaacagcttatagacatatcataagttgtttttataagctctc 11183637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 310
Target Start/End: Complemental strand, 11569488 - 11569409
Alignment:
Q  232 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 310  Q
    |||||||||||||| |  | |||||||||||||||| |||||| ||||||||||  ||| | ||||||||||| ||||||    
T  11569488 aaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcacaagtggttatgc 11569409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 454
Target Start/End: Complemental strand, 30657833 - 30657798
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataa 454  Q
    ||||||||||||||||||||||||||||| ||||||    
T  30657833 tttttataagctatattggagaacttatgaaaataa 30657798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 420
Target Start/End: Complemental strand, 37444586 - 37444531
Alignment:
Q  365 atttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatt 420  Q
    |||||||| ||| ||||||| |||||||||||| || ||||||||| |||||||||    
T  37444586 atttgcaggttaaagcataagcacttatcatgataagcgcttatgtataagctatt 37444531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 462
Target Start/End: Original strand, 18133666 - 18133708
Alignment:
Q  420 ttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||||| ||||||||||||||||||| ||||||||| ||||    
T  18133666 ttttataaactatattggagaacttatgaaaataagctgaaaa 18133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 256 - 325
Target Start/End: Original strand, 39049335 - 39049405
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctca 325  Q
    |||||| |||||||||||  ||||||| ||||||| | |||||||| ||||||||||| | ||||||||||    
T  39049335 acatgttataagttgttttcataagctttcacaaacaatctcacaaatgtttatgctagtagataagctca 39049405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 43393778 - 43393704
Alignment:
Q  257 catgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    ||||||||||||||| ||||||||||||| |||| | ||||| |||||||| ||| | | |||||||| ||||||    
T  43393778 catgtcataagttgtatctataagctctcccaaacagtctcaaaagtgtttttgcaagtagataagcttaaataa 43393704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 3254244 - 3254305
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    |||||||| ||||| ||| ||||||||||||||| || | ||| |||||||||||| |||||    
T  3254244 ctatcctatagagtgtatagaaataagctgaaaacagcttatgaacatgtcataagctgttt 3254305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 3537002 - 3536961
Alignment:
Q  423 tataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| ||| |||||||||||||||||||||||| ||||||    
T  3537002 tataagatatcttggagaacttatggaaataagctgaaaaca 3536961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 427
Target Start/End: Original strand, 8216788 - 8216841
Alignment:
Q  374 ttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    ||||||||||| |||||||||||| |||| ||||||| ||||| |||| |||||    
T  8216788 ttatagcataaacacttatcatgataaacacttatgtataagccatttatataa 8216841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 265
Target Start/End: Original strand, 11121802 - 11121847
Alignment:
Q  220 aagagtttatggaaataagctgaaaatagttcatgtacatgtcata 265  Q
    ||||||||||||||||||||||||||||| | |||  |||||||||    
T  11121802 aagagtttatggaaataagctgaaaatagataatgatcatgtcata 11121847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 11415173 - 11415246
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||||||| ||||||| || ||||||||||| ||||| | ||| |||||| ||||| |||||| |||| |||||    
T  11415173 ctatcctagagagtttgtgaaaataagctgagaatagcttatggacatgttataagctgtttccataaactctc 11415246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 25869308 - 25869255
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttc 274  Q
    ||||||||||||||||||||||||| |  | ||| |||||||||||||| ||||    
T  25869308 agagtttatggaaataagctgaaaacaacttatggacatgtcataagttatttc 25869255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 279
Target Start/End: Complemental strand, 29262923 - 29262858
Alignment:
Q  214 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 279  Q
    |||||| |||||||| |||||| |  ||||||||| | ||| ||||||||||||||||||| ||||    
T  29262923 atcctagagagtttacggaaattacttgaaaatagcttatgaacatgtcataagttgtttccataa 29262858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 245
Target Start/End: Complemental strand, 30277296 - 30277263
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaa 245  Q
    |||||||| |||||||||||||||||||||||||    
T  30277296 ctatcctagagagtttatggaaataagctgaaaa 30277263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 30988029 - 30987964
Alignment:
Q  226 ttatggaaataagctgaaaa-tagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||| ||| ||||||| ||| | ||| ||||||||||||||||||| |||||||||| ||||    
T  30988029 ttatggaactaaactgaaaaatagcttatggacatgtcataagttgtttccataagctctctcaaa 30987964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 336
Target Start/End: Original strand, 1561345 - 1561421
Alignment:
Q  261 tcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataaaacaat 336  Q
    ||||||||||||| | | ||||||| |||| | |||||||||||||||||| | | |||||| ||||||||| ||||    
T  1561345 tcataagttgtttttgtgagctctctcaaacaatctcacaagtgtttatgccattagataagatcaaataaatcaat 1561421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 423 - 463
Target Start/End: Complemental strand, 3537086 - 3537046
Alignment:
Q  423 tataagctatattggagaacttatggaaataagcttaaaac 463  Q
    |||||| ||| |||||||||||||||||||||||| |||||    
T  3537086 tataagatatcttggagaacttatggaaataagctgaaaac 3537046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 456
Target Start/End: Original strand, 6881936 - 6881972
Alignment:
Q  420 ttttataagctatattggagaacttatggaaataagc 456  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  6881936 ttttataagctaaattggagaacttatgaaaataagc 6881972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 330
Target Start/End: Complemental strand, 7918781 - 7918713
Alignment:
Q  263 ataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||||||  |||||||||| |||| | |||||||||||||||||||| | |||||| | ||||||    
T  7918781 ataagttgttttcataagctctcccaaacagtctcacaagtgtttatgctagtagataagtttaaataa 7918713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 10114491 - 10114543
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| |||| || |||||||||||||||| |||| ||||||||| ||||||    
T  10114491 taagctgttttcattagctatattggagaacatatgaaaataagctgaaaaca 10114543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 28769407 - 28769355
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| |||| ||||||||| |||||||  ||||||||||||||| ||||||    
T  28769407 taagctgttttcataagctattttggagagtttatggaaataagctgaaaaca 28769355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 29169147 - 29169087
Alignment:
Q  213 tatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    |||||| |||||||||||||||||||| |||||||| | ||| | |||| ||||| |||||    
T  29169147 tatcctgaagagtttatggaaataagccgaaaatagcttatggatatgttataagctgttt 29169087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 463
Target Start/End: Complemental strand, 39881813 - 39881769
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaac 463  Q
    ||||||||||||||  |||||| |||||||||||||||| |||||    
T  39881813 tttttataagctatcatggagagcttatggaaataagctgaaaac 39881769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 299
Target Start/End: Original strand, 40071812 - 40071856
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcaca 299  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||    
T  40071812 acatgtcataagttgtttccataagctctcccaaacactctcaca 40071856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 8e-16; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 3501003 - 3500940
Alignment:
Q  227 tatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||||||||||||||| || | |||||||||||||||||| |||| |||||||||||||||    
T  3501003 tatggaaataagctgaaaacagctgatgtacatgtcataagttatttccataagctctcacaaa 3500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 290
Target Start/End: Complemental strand, 48157157 - 48157093
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||||||||||||||| || | ||| ||||| |||||||||||||||||||||||| ||||    
T  48157157 ttatggaaataagctgaaaacagcttatggacatggcataagttgtttctataagctctcccaaa 48157093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 215 - 282
Target Start/End: Complemental strand, 12234937 - 12234870
Alignment:
Q  215 tcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 282  Q
    ||||| |||| |||||||||||||||||||| || | ||  |||||||||||||||||||||||||||    
T  12234937 tcctagagagcttatggaaataagctgaaaacagcttatagacatgtcataagttgtttctataagct 12234870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 33894640 - 33894765
Alignment:
Q  206 cttaatctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgt 304  Q
    ||||| |||||||  | ||||||| ||||||||||||||| |  | ||| |||||||||| | |||||  ||||||||||||||| | |||||||||||     
T  33894640 cttaagctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgc 33894739  T
Q  305 ttatgctaatggataagctcaaataa 330  Q
    |||||  | | |||||||||||||||    
T  33894740 ttatgtcatttgataagctcaaataa 33894765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 422
Target Start/End: Original strand, 7612352 - 7612415
Alignment:
Q  359 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttt 422  Q
    |||||||||||||| ||||||||||| |||||||||||| || | | ||||| |||||||||||    
T  7612352 aacttaatttgcagcttatagcataagcacttatcatgataagctcatatgtataagctatttt 7612415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 359 - 422
Target Start/End: Original strand, 40598480 - 40598543
Alignment:
Q  359 aacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttt 422  Q
    ||||||||||| |||||||||||||||||| |||||||| || |||| || | |||||||||||    
T  40598480 aacttaatttgaagtttatagcataatcacctatcatgacaagcgctcatttataagctatttt 40598543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 2767216 - 2767162
Alignment:
Q  225 tttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataa 279  Q
    |||||||||||||| |||||| |||| ||| |||||| |||||||||||||||||    
T  2767216 tttatggaaataagttgaaaacagttgatggacatgtaataagttgtttctataa 2767162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 46280340 - 46280290
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||| ||||    
T  46280340 taagctgtttttataagctatattggagaacttatgaaaataggctgaaaa 46280290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 330
Target Start/End: Original strand, 1418460 - 1418557
Alignment:
Q  232 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    ||||||||||||||||||| ||| |||||   |||  |||||||||||||||||||||| |  |||| ||||| |||||| | | |||||||||||||||    
T  1418460 aaataagctgaaaatagtttatggacatggtgtaa--tgtttctataagctctcacaaacagcctcataagtgcttatgccagtagataagctcaaataa 1418557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 19022646 - 19022610
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    ||||||||||||||||||||||||||||| |||||||    
T  19022646 tttttataagctatattggagaacttatgaaaataag 19022610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 21568556 - 21568520
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    |||||||||||||||||||||||||||||||| ||||    
T  21568556 tttttataagctatattggagaacttatggaactaag 21568520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 42281556 - 42281492
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||| |||| ||||||||||||||| |  | || ||||||||||||| |||||||||||||||||    
T  42281556 agagcttatagaaataagctgaaaacaaattatttacatgtcataagctgtttctataagctctc 42281492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 4966177 - 4966248
Alignment:
Q  214 atcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    ||||| ||||| |||||||||||| ||||||| |  | ||| |||| |||||||| ||||||||||||||||    
T  4966177 atcctgaagagcttatggaaataaactgaaaacaacttatggacatatcataagtggtttctataagctctc 4966248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 330
Target Start/End: Complemental strand, 13960754 - 13960656
Alignment:
Q  232 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||||||| |||| | ||| || ||| ||||| |||||  |||||||||| |||| | |||| |||||| |||||| |||||||||||||||||||    
T  13960754 aaataagctgaacatagcttatggacttgttataagctgttttcataagctctctcaaatagtctcgcaagtgcttatgc-aatggataagctcaaataa 13960656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 36537971 - 36538026
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgc 310  Q
    ||||||||||||||||||| ||||| |||| |||| | ||||||||||||||||||    
T  36537971 acatgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttatgc 36538026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 290
Target Start/End: Complemental strand, 36598388 - 36598329
Alignment:
Q  231 gaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||||||||||| || | ||| |||||||||||| |||||| |||||||||| ||||    
T  36598388 gaaataagctgaaaacagcttatgaacatgtcataagatgtttccataagctctctcaaa 36598329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 330
Target Start/End: Original strand, 40428574 - 40428693
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcaca-aaactctcacaagtgtttatgc 310  Q
    ||||||||||||| |||||||||||||||||||| |||| ||   | |||||||||| || | |||||||| || || | | ||||||||||| |||||     
T  40428574 ctatcctaaagagcttatggaaataagctgaaaacagtttatcggcgtgtcataagtcgtatgtataagctttcccagatagtctcacaagtggttatgt 40428673  T
Q  311 taatggataagctcaaataa 330  Q
     ||  |||||| ||||||||    
T  40428674 caacagataagttcaaataa 40428693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 282
Target Start/End: Complemental strand, 27626166 - 27626104
Alignment:
Q  220 aagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagct 282  Q
    ||||| ||||||||||||| | |||| |||| ||| |||||||||||| |||||| |||||||    
T  27626166 aagagcttatggaaataagtttaaaacagtttatggacatgtcataagctgtttccataagct 27626104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 49019870 - 49019912
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataa 454  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||    
T  49019870 taagctatttttataagttatattgtagaacttatgaaaataa 49019912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 283
Target Start/End: Complemental strand, 5017977 - 5017920
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc 283  Q
    |||||||||||||||||||||| || ||  ||||||||||||  ||||||||| ||||    
T  5017977 ttatggaaataagctgaaaatatttgatcgacatgtcataagccgtttctatatgctc 5017920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 7244689 - 7244734
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| ||||||||||||||||| |||||| ||||||||| ||||||    
T  7244689 ttttcataagctatattggagagcttatgaaaataagctgaaaaca 7244734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 309
Target Start/End: Complemental strand, 22387938 - 22387849
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 309  Q
    |||| ||||||||||||| | |||| |||| ||  ||||| ||||||||||||  |||||||||| |||| | ||||||| |||||||||    
T  22387938 agagcttatggaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaacagtctcacacgtgtttatg 22387849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 26935612 - 26935575
Alignment:
Q  208 taatctatcctaaagagtttatggaaataagctgaaaa 245  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26935612 taatctattctaaagagcttatggaaataagctgaaaa 26935575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 464
Target Start/End: Original strand, 39280982 - 39281023
Alignment:
Q  423 tataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||||||| ||||||||| |||||||||||||| ||||||    
T  39280982 tataagctatcttggagaacatatggaaataagctgaaaaca 39281023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 44686972 - 44687021
Alignment:
Q  235 taagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    |||| |||||| || ||||| ||||||||||||||||||| |||||||||    
T  44686972 taagttgaaaacagctcatggacatgtcataagttgtttccataagctct 44687021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 330
Target Start/End: Original strand, 44808191 - 44808296
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctc 324  Q
    ||||| |||||||||||||| || | ||| |||||||||||||| |||  ||||| |||  |||| | ||| |||| || ||||||||||  ||||||||    
T  44808191 ttatgaaaataagctgaaaacaggttatggacatgtcataagttattttcataaggtctatcaaacagtctgacaactgcttatgctaataaataagctc 44808290  T
Q  325 aaataa 330  Q
    ||||||    
T  44808291 aaataa 44808296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 12792631 - 12792579
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||| ||||||||| ||| ||| |||||| ||||||||| ||||||    
T  12792631 taagctattttcataagctatcttgaagagcttatgaaaataagctgaaaaca 12792579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 19718908 - 19718968
Alignment:
Q  367 ttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    |||||| ||||| || || |||||||||||| |||| ||| |||||||||||||| |||||    
T  19718908 ttgcagcttataacacaagcacttatcatgataaacacttgtgtgtaagctatttctataa 19718968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 363 - 427
Target Start/End: Original strand, 21619304 - 21619368
Alignment:
Q  363 taatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    |||||||||| |||||||| || |||||||||||| || | ||||| | |||||||||| |||||    
T  21619304 taatttgcagcttatagcacaagcacttatcatgataagcacttatctctaagctatttctataa 21619368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 27496449 - 27496386
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    ||||||||||||||||||||||||| || | ||| ||||||||| || ||||||  |||||||||    
T  27496449 agagtttatggaaataagctgaaaacagcttatggacatgtcatgag-tgtttccttaagctctc 27496386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 27503107 - 27503044
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    ||||||||||||||||||||||||| || | ||| ||||||||| || ||||||  |||||||||    
T  27503107 agagtttatggaaataagctgaaaacagcttatggacatgtcatgag-tgtttccttaagctctc 27503044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 269
Target Start/End: Complemental strand, 27517898 - 27517850
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagtt 269  Q
    |||||||||||||||||||||||||  | | ||| ||||||||||||||    
T  27517898 agagtttatggaaataagctgaaaactgcttatggacatgtcataagtt 27517850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 43694638 - 43694594
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagc 456  Q
    |||||| |||||||||||||||| | |||||||||| ||||||||    
T  43694638 taagctgtttttataagctatatcgaagaacttatgaaaataagc 43694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 285
Target Start/End: Complemental strand, 44615146 - 44615082
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||||||||||||||||  |||||| || |  || ||||||||||||||||||  ||||||||||    
T  44615146 agagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctc 44615082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 285
Target Start/End: Original strand, 45078314 - 45078370
Alignment:
Q  229 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||||||||| |||||| || | ||| |||||||||||||| |||||||||| ||||    
T  45078314 tggaaataagttgaaaacagcttatggacatgtcataagttatttctataagttctc 45078370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 337
Target Start/End: Complemental strand, 6231853 - 6231741
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct-cacaaaactctcacaagtgtttatgctaatggataagctc 324  Q
    |||| ||||||||||||||| |||| ||| ||||||||| ||||||||| || |||| | || || | |||||||| ||||||||||| | ||||| |||    
T  6231853 ttatagaaataagctgaaaacagtttatggacatgtcattagttgtttccatgagctatccagaacaatctcacaaatgtttatgctagtagataacctc 6231754  T
Q  325 aaataaaacaatt 337  Q
    ||||||| |||||    
T  6231753 aaataaaccaatt 6231741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 212 - 308
Target Start/End: Complemental strand, 23373363 - 23373267
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttat 308  Q
    ||||||| ||||| |||  ||||||||||||||| || |  || |||||||||||||||||||||||||||||| |||| | ||||||||||| ||||    
T  23373363 ctatcctgaagagcttacagaaataagctgaaaacagatg-tggacatgtcataagttgtttctataagctctcccaaacaatctcacaagtgcttat 23373267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 4202182 - 4202115
Alignment:
Q  232 aaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaa 300  Q
    ||||||||||||||||| | ||| |||||||||||| ||||| ||||||||||| |||||| |||||||    
T  4202182 aaataagctgaaaatagcttatggacatgtcataagctgttt-tataagctctctcaaaaccctcacaa 4202115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 412 - 455
Target Start/End: Complemental strand, 51929607 - 51929564
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataag 455  Q
    |||||| ||||||||| |||||||||||||||||||||||||||    
T  51929607 taagctgtttttataaactatattggagaacttatggaaataag 51929564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 1662601 - 1662711
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggata 319  Q
    |||| ||||| |||||| || |||||| || ||| |||||||||||||||||||  ||||||||| |||| | |||| || ||  |||||||| | ||||    
T  1662601 agagcttatgaaaataaactaaaaatattttatggacatgtcataagttgtttccgtaagctctcgcaaatagtctcgcatgtacttatgctagtagata 1662700  T
Q  320 agctcaaataa 330  Q
    |||||||||||    
T  1662701 agctcaaataa 1662711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 462
Target Start/End: Original strand, 5741608 - 5741658
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||| ||||    
T  5741608 taagctatttttataagctatattagagaacttatgaaaatcagctgaaaa 5741658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 6976953 - 6977062
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggata 319  Q
    |||||||||||||||||| | |||| || | ||| ||||||||||||||||||| || ||||||| |||| |  |||||||||  | ||||||||  |||    
T  6976953 agagtttatggaaataagtt-aaaacagcttatgaacatgtcataagttgtttccattagctctcgcaaacagcctcacaagttctcatgctaataaata 6977051  T
Q  320 agctcaaataa 330  Q
    |||||||||||    
T  6977052 agctcaaataa 6977062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 330
Target Start/End: Complemental strand, 31517782 - 31517672
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggata 319  Q
    |||| ||||| |||||||||||||| || | ||| ||||||||| ||||||||  ||||| |||| |||| | ||||||||||| |||||| | |  |||    
T  31517782 agagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaaata 31517683  T
Q  320 agctcaaataa 330  Q
    |||||||||||    
T  31517682 agctcaaataa 31517672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 419 - 464
Target Start/End: Complemental strand, 12564560 - 12564515
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||    
T  12564560 ttttcataagctatcttggagaacttatggaaataagctgaaaaca 12564515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 285
Target Start/End: Original strand, 15437982 - 15438055
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    |||||||  |||||||| ||||||||||||||| ||  | ||| ||||||||||||||||||| |||| |||||    
T  15437982 ctatcctcgagagtttacggaaataagctgaaagtaacttatgaacatgtcataagttgtttccataacctctc 15438055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 326
Target Start/End: Complemental strand, 32859988 - 32859883
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataa 320  Q
    |||| ||||||||| |||||||||| | || ||| |||||| |||| ||||||| || | ||||| | ||| ||||||||||  |||||||| | |||||    
T  32859988 agagcttatggaaacaagctgaaaacaatttatgaacatgttataaattgtttccatgaactctccctaaagtctcacaagtacttatgctagtagataa 32859889  T
Q  321 gctcaa 326  Q
    ||||||    
T  32859888 gctcaa 32859883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 226 - 330
Target Start/End: Complemental strand, 33723419 - 33723314
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa-aactctcacaagtgtttatgctaatggataagctc 324  Q
    |||||||||||||||||||| |  ||||| ||||||||| || |||||| ||||| | || |||  | ||||||||||||||||| || | |||||| ||    
T  33723419 ttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcacaagtgtttatggtagtagataagttc 33723320  T
Q  325 aaataa 330  Q
    ||||||    
T  33723319 aaataa 33723314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 3234076 - 3234040
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    ||||||||||||||||||||||||||||| |||||||    
T  3234076 tttttataagctatattggagaacttatgaaaataag 3234040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 464
Target Start/End: Complemental strand, 14630034 - 14629982
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||| ||||||||| |||||||  ||||||||||||||| ||||||    
T  14630034 taagctattttcataagctatcttggagactttatggaaataagctgaaaaca 14629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 222 - 290
Target Start/End: Original strand, 15579511 - 15579579
Alignment:
Q  222 gagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    ||||||||||||||||||||| || |  | ||| ||||||||||||||||||| | |||||||| ||||    
T  15579511 gagtttatggaaataagctgagaacaacttatggacatgtcataagttgtttccacaagctctcccaaa 15579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 24153346 - 24153378
Alignment:
Q  258 atgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||||||||||||||||||||||||||||    
T  24153346 atgtcataagttgtttctataagctctcacaaa 24153378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 330
Target Start/End: Complemental strand, 30815690 - 30815586
Alignment:
Q  226 ttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaaactctcacaagtgtttatgctaatggataagctca 325  Q
    ||||| |||||||||||||| | || ||| |||||||||||| ||||| |||||||||||  || ||| || | |||  |||||||| | ||||| ||||    
T  30815690 ttatgaaaataagctgaaaacattttatgaacatgtcataagctgtttatataagctctccaaacactatcgctagttcttatgctagtagataacctca 30815591  T
Q  326 aataa 330  Q
    |||||    
T  30815590 aataa 30815586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 462
Target Start/End: Complemental strand, 37631625 - 37631577
Alignment:
Q  414 agctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||| ||||| ||||||||||||||||||||||| ||||||||| ||||    
T  37631625 agctgtttttgtaagctatattggagaacttatgaaaataagctgaaaa 37631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 4549548 - 4549473
Alignment:
Q  256 acatgtcataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||||||||||||||||||||||||| |||| | ||||| || || |||||| | | ||||| |||||||||    
T  4549548 acatgtcataagttgtttctataagctctcccaaacagtctcagaaatgcttatgccagtagataatctcaaataa 4549473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 411 - 462
Target Start/End: Original strand, 5720926 - 5720977
Alignment:
Q  411 gtaagctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    ||||||||||||||||||||||||| |||||| |||| |||| |||| ||||    
T  5720926 gtaagctatttttataagctatattagagaacatatgaaaatcagctgaaaa 5720977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 17420238 - 17420325
Alignment:
Q  228 atggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc-tcacaaaactctcacaagtgtttatgctaat 314  Q
    ||||||||||| |||||| | || ||| |||||| |||||||||||  |||||||| ||| || | ||| ||||||||||||||||||    
T  17420238 atggaaataagttgaaaacaatttatggacatgtaataagttgttttcataagctcttcaaaacagtctaacaagtgtttatgctaat 17420325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 284
Target Start/End: Complemental strand, 30259528 - 30259465
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctct 284  Q
    |||| ||||||||||||| |||||| | || ||  ||||||| |||||||||||||||||||||    
T  30259528 agagcttatggaaataagttgaaaacaatttattgacatgtcgtaagttgtttctataagctct 30259465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 33975589 - 33975644
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataag 267  Q
    |||||||| |||| ||||| ||||||||||||||||||| ||| |||| |||||||    
T  33975589 ctatcctagagagcttatgaaaataagctgaaaatagtttatggacatatcataag 33975644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 269
Target Start/End: Complemental strand, 3597321 - 3597275
Alignment:
Q  223 agtttatggaaataagctgaaaatagttcatgtacatgtcataagtt 269  Q
    |||||||||||||||||||||||||| | |||  |||||||||||||    
T  3597321 agtttatggaaataagctgaaaatagcttatggccatgtcataagtt 3597275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 462
Target Start/End: Complemental strand, 7137066 - 7137016
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaa 462  Q
    |||||| |||| ||||||||| |||||||||||||| ||||||||| ||||    
T  7137066 taagctgttttcataagctatcttggagaacttatgaaaataagctgaaaa 7137016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 365 - 427
Target Start/End: Complemental strand, 7137172 - 7137110
Alignment:
Q  365 atttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    |||||||||||||||||||  |||||||| ||| || ||||||| | ||| ||||||||||||    
T  7137172 atttgcagtttatagcataggcacttatcttgataagcgcttatatataaactatttttataa 7137110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 290
Target Start/End: Original strand, 10439705 - 10439783
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||  ||||||||||||||||||||||||  || | ||| ||||||||||  ||||||  |||||||||| ||||    
T  10439705 ctatcctggagagtttatggaaataagctgaaagcagattatggacatgtcatagtttgttttcataagctctcccaaa 10439783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 17628635 - 17628689
Alignment:
Q  229 tggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctc 283  Q
    |||||||| |||||||| || | ||| ||||||||||||||||||| ||||||||    
T  17628635 tggaaatatgctgaaaacagcttatggacatgtcataagttgtttccataagctc 17628689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 310
Target Start/End: Original strand, 26179500 - 26179589
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcac-aaaactctcacaagtgtttatgc 310  Q
    |||||||||||||| | |||||||| |  ||||| |||||||||||||||||||  ||| ||||| | || | ||||||||||||||||||    
T  26179500 agagtttatggaaa-atgctgaaaacaactcatgcacatgtcataagttgtttccttaaactctccctaacagtctcacaagtgtttatgc 26179589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 427
Target Start/End: Original strand, 4549758 - 4549827
Alignment:
Q  358 taacttaatttgcagtttatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    ||||||||||||||| ||||||||||| | |||| || || ||| ||||||||  ||||||||| |||||    
T  4549758 taacttaatttgcagcttatagcataaacgcttagcacgataaatgcttatgtacaagctatttctataa 4549827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 309
Target Start/End: Original strand, 5157140 - 5157189
Alignment:
Q  261 tcataagttgtttctataagctctcacaaa-actctcacaagtgtttatg 309  Q
    ||||||||||||||||||||||||| |||| | | |||||||||||||||    
T  5157140 tcataagttgtttctataagctctcccaaacagtttcacaagtgtttatg 5157189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 285
Target Start/End: Complemental strand, 7262569 - 7262496
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctc 285  Q
    ||||||| ||||| || |||||||||| |||||| || | ||| |||||||| ||| ||||| |||||||||||    
T  7262569 ctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgtcaaaagctgtttttataagctctc 7262496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 464
Target Start/End: Original strand, 10809362 - 10809399
Alignment:
Q  427 agctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  10809362 agctatattggagaacttatgaaaataagctgaaaaca 10809399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 245
Target Start/End: Complemental strand, 28083345 - 28083308
Alignment:
Q  208 taatctatcctaaagagtttatggaaataagctgaaaa 245  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  28083345 taatctatcctaaagagcttatgaaaataagctgaaaa 28083308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 35017683 - 35017720
Alignment:
Q  293 tctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  35017683 tctcacaagtgtttatgccaatagataagctcaaataa 35017720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 42174864 - 42174909
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||||||| |||||||||||||||||| ||||||| | ||||||    
T  42174864 tttttataagttatattggagaacttatgaaaataagttaaaaaca 42174909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 457
Target Start/End: Original strand, 44422701 - 44422746
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagct 457  Q
    |||||||||||||||||||||  |||||| |||||| |||||||||    
T  44422701 taagctatttttataagctatcctggagagcttatgaaaataagct 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 330
Target Start/End: Complemental strand, 48748564 - 48748527
Alignment:
Q  293 tctcacaagtgtttatgctaatggataagctcaaataa 330  Q
    |||||||||||||||||  |||||||||||||||||||    
T  48748564 tctcacaagtgtttatgtcaatggataagctcaaataa 48748527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 427
Target Start/End: Complemental strand, 1829115 - 1829063
Alignment:
Q  375 tatagcataatcacttatcatgagaaacgcttatgtgtaagctatttttataa 427  Q
    |||||||||| |||||||||||| || ||||||||| ||||  ||||||||||    
T  1829115 tatagcataaacacttatcatgataagcgcttatgtataagtcatttttataa 1829063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 326
Target Start/End: Complemental strand, 4118871 - 4118807
Alignment:
Q  263 ataagttgtttctataagctctcacaaa-actctcacaagtgtttatgctaatggataagctcaa 326  Q
    ||||||||||||||||||||||  |||| | ||||| |||||||||| ||| | |||||||||||    
T  4118871 ataagttgtttctataagctctttcaaagagtctcaaaagtgtttatactagtagataagctcaa 4118807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 6102156 - 6102208
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| |||| ||||||||| | |||||| ||||||||||||||| ||||||    
T  6102156 taagctgttttcataagctatctgggagaatttatggaaataagctgaaaaca 6102208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 464
Target Start/End: Original strand, 15784339 - 15784383
Alignment:
Q  420 ttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    ||||||||||||| ||||||||||| || ||||||||| ||||||    
T  15784339 ttttataagctatcttggagaacttgtgaaaataagctaaaaaca 15784383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 17603445 - 17603409
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    |||||||||||||||||||||||||| || |||||||    
T  17603445 tttttataagctatattggagaacttctgaaaataag 17603409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 290
Target Start/End: Complemental strand, 24502861 - 24502801
Alignment:
Q  230 ggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaaa 290  Q
    |||||||||||||||| |  | ||  |||||||||||||||||||| ||||||||| ||||    
T  24502861 ggaaataagctgaaaacaaattattgacatgtcataagttgtttctgtaagctctctcaaa 24502801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 464
Target Start/End: Original strand, 27140480 - 27140532
Alignment:
Q  412 taagctatttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||| ||||||||||||||  |||||| |||||| ||||||||| ||||||    
T  27140480 taagctgtttttataagctatcatggagagcttatgcaaataagctgaaaaca 27140532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 35925718 - 35925770
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
    |||||||||||||||||| |||||| || | ||| |||||||||||| |||||    
T  35925718 agagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttt 35925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 41505688 - 41505720
Alignment:
Q  412 taagctatttttataagctatattggagaactt 444  Q
    |||||| ||||||||||||||||||||||||||    
T  41505688 taagctgtttttataagctatattggagaactt 41505720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 221 - 281
Target Start/End: Complemental strand, 45999330 - 45999270
Alignment:
Q  221 agagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagc 281  Q
    |||| ||| ||| |||||||||||| |||| ||| |||||||||||| || ||||||||||    
T  45999330 agagattacggacataagctgaaaacagtttatgaacatgtcataagctgcttctataagc 45999270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 419 - 455
Target Start/End: Original strand, 49938756 - 49938792
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataag 455  Q
    ||||||||||||||||| ||||||||||| |||||||    
T  49938756 tttttataagctatattagagaacttatgaaaataag 49938792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 27020 - 27075
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataag 267  Q
    ||||| || |||| |||||||||||||||||||| |||| ||| ||||||||||||    
T  27020 ctatcatagagagcttatggaaataagctgaaaacagtttatgcacatgtcataag 27075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 12755 - 12678
Alignment:
Q  212 ctatcctaaagagtttatggaaataagctgaaaatagttcatgtacatgtcataagttgtttctataagctctcacaa 289  Q
    ||||| || |||| |||||||  ||||||||||| |  | ||| ||||||||||||||||||| ||||| ||||||||    
T  12755 ctatcttagagagcttatggagctaagctgaaaacaacttatggacatgtcataagttgtttccataaggtctcacaa 12678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0147; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 464
Target Start/End: Original strand, 23640 - 23685
Alignment:
Q  419 tttttataagctatattggagaacttatggaaataagcttaaaaca 464  Q
    |||||||||||||||||||||||||| || ||||||| | ||||||    
T  23640 tttttataagctatattggagaacttgtgaaaataagttgaaaaca 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 1167 - 1123
Alignment:
Q  229 tggaaataagctgaaaatagttcatgtacatgtcataagttgttt 273  Q
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T  1167 tggaaattagctgaaaacagttcatgaacatgtcataagctgttt 1123  T

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