View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11406_low_7 (Length: 421)
Name: NF11406_low_7
Description: NF11406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11406_low_7 |
 |  |
|
| [»] scaffold0477 (1 HSPs) |
 |  |  |
|
| [»] scaffold0288 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 354; Significance: 0; HSPs: 15)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 354; E-Value: 0
Query Start/End: Original strand, 19 - 419
Target Start/End: Original strand, 4265897 - 4266298
Alignment:
| Q |
19 |
gaacttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4265897 |
gaacttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttac |
4265996 |
T |
 |
| Q |
119 |
atgccttttacaatagatgctgcggaagaacatgcactcccaatccttttcttttctccatgcaatgcatctacgttcttgtgtacttttcaatttccta |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4265997 |
atgccttttacaatagatgctgcggaagaacatgcactcccaatccttttcttttctccatgcaatgcatctacgttcttgtgtacttttcaatttccta |
4266096 |
T |
 |
| Q |
219 |
ctctgattcgaaaaggtctactaccactcaaaggtaacaattatgatccnnnnnnnnnnnnaagagaaatgtgcatgaatctatatatgtgatcacgttt |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4266097 |
ctctgattcgaaaaggtctactaccactcaaaggtaacaattatgatccttttttctttttaagagaaatgtgcatgaatctatatatgtgatcacgttt |
4266196 |
T |
 |
| Q |
319 |
agggctgcatcagtcgcattgcgattatgtgcatcatcaaaatgacaacacaa-cacaattattactgggaacatgatttaaaatcttgatgtgtgtctg |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4266197 |
agggctgcatcagtcgcattgcgattatgtgcatcatcaaaatgacaacacaaccacaattattactgggaacatgatttaaaatcttgatgtgtgtgtg |
4266296 |
T |
 |
| Q |
418 |
tg |
419 |
Q |
| |
|
|| |
|
|
| T |
4266297 |
tg |
4266298 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 298 - 414
Target Start/End: Complemental strand, 4458718 - 4458598
Alignment:
| Q |
298 |
tctatatatgtgatcacgtttagggctgcatcagtcgcattgcgattatgtgcatcatcaaaatgacaacacaa-cacaattat---tactgggaacatg |
393 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || | |||||| |
|
|
| T |
4458718 |
tctatatatgtgatcacgtttagggctgcatcagtcgcattgcgattatgtgcatcatcaaaatgacgacacaaccacaattattaatattaaaaacatg |
4458619 |
T |
 |
| Q |
394 |
atttaaaatcttgatgtgtgt |
414 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
4458618 |
atttaaaatcttgatgtgtgt |
4458598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 4471203 - 4471047
Alignment:
| Q |
21 |
acttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacat |
120 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| || ||||||| || |||| |||| || ||| |||||||| | |||| ||||||||||| |
|
|
| T |
4471203 |
acttccttcaaccctttggtgaacttcttactagacttgatgcctctgccactgctggtcttatccctccagttacttgcataatttctgattgttacat |
4471104 |
T |
 |
| Q |
121 |
gccttttacaatagatgctgcggaagaacatgcactcccaatccttttcttttctcc |
177 |
Q |
| |
|
||| |||||| |||||||||| ||||||| ||||||||||||| || |||||||||| |
|
|
| T |
4471103 |
gccatttacagtagatgctgctgaagaacgtgcactcccaatcgttctcttttctcc |
4471047 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 4627439 - 4627197
Alignment:
| Q |
18 |
agaacttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgtta |
117 |
Q |
| |
|
||||||||||||| ||||||| |||||||||| ||| ||||||| | || |||| || |||| || || ||||| |||||||||| ||||| ||||||| |
|
|
| T |
4627439 |
agaacttccttcagccctttggtgaacttcttgctaaacttcatgactcagccactgctggtcttgttgcaccagttacttgcttagtttcagattgttt |
4627340 |
T |
 |
| Q |
118 |
catgccttttacaatagatgctgcggaagaacatgcactcccaatccttttcttttctccatgcaatgcatctacgttcttgtgtacttttcaatttcct |
217 |
Q |
| |
|
||| | ||||| ||| | ||||| |||||||||||||||||||| | |||||||| | | | ||||| | | ||||||| || ||| || |||| | |
|
|
| T |
4627339 |
aatgtcatttaccatacaagctgctgaagaacatgcactcccaattgctctcttttctacttctagtgcatgttctttcttgtctattttgcactttcgt |
4627240 |
T |
 |
| Q |
218 |
actctgattcgaaaaggtctactaccactcaaaggtaacaatt |
260 |
Q |
| |
|
|| ||| || |||||||||| ||||||||||||||||||||| |
|
|
| T |
4627239 |
acactgtttgaaaaaggtctaataccactcaaaggtaacaatt |
4627197 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 261
Target Start/End: Complemental strand, 4623574 - 4623353
Alignment:
| Q |
40 |
tgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaatagatgct |
139 |
Q |
| |
|
|||||||||| | | ||||||| | ||||||| || |||| || |||||||| |||||||||| |||||||||||||||||| | ||||||||| | ||| |
|
|
| T |
4623574 |
tgaacttcttgcaaaacttcatgactctgccactgctggtcttgttccaccagttacttgcttagtttccgattgttacatgtcatttacaatacaagct |
4623475 |
T |
 |
| Q |
140 |
gcggaagaacatgcactcccaatccttttcttttctccatgcaatgcatctacgttcttgtgtacttttcaatttcctactctgattcgaaaaggtctac |
239 |
Q |
| |
|
|| ||||| |||||||||||||| ||||||| || ||| | |||| ||| ||||||| | ||| || |||| ||| ||| || ||||||||| |
|
|
| T |
4623474 |
gctgaagagcatgcactcccaattgttttcttctccccagctagtgcaagtaccttcttgtctgttttacactttcatacactgtttgagaaaggtctaa |
4623375 |
T |
 |
| Q |
240 |
taccactcaaaggtaacaatta |
261 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
4623374 |
taccactcaaaggtaacaatta |
4623353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 4259015 - 4259257
Alignment:
| Q |
18 |
agaacttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgtta |
117 |
Q |
| |
|
||||||||||||| ||||||| |||||||||| ||| |||||| | || |||| | |||| || ||||||| |||||||||| ||||| |||||||| |
|
|
| T |
4259015 |
agaacttccttcagccctttggtgaacttcttgctaaacttcaagactcagccactactggtattgttccacctgttacttgcttagtttctgattgtta |
4259114 |
T |
 |
| Q |
118 |
catgccttttacaatagatgctgcggaagaacatgcactcccaatccttttcttttctccatgcaatgcatctacgttcttgtgtacttttcaatttcct |
217 |
Q |
| |
|
|||| | |||| ||| | ||||| ||||| |||||||||||||| ||||||| |||||| | |||| ||| ||||||| | ||| || |||| | |
|
|
| T |
4259115 |
catgtcatttagtatacaagctgctgaagagcatgcactcccaattgttttcttctctccagctagtgcaagtaccttcttgtctgttttacactttcgt |
4259214 |
T |
 |
| Q |
218 |
actctgattcgaaaaggtctactaccactcaaaggtaacaatt |
260 |
Q |
| |
|
|| ||| || |||||||||| ||||||||||||||||||||| |
|
|
| T |
4259215 |
acactgtttgaaaaaggtctaataccactcaaaggtaacaatt |
4259257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 34 - 162
Target Start/End: Complemental strand, 4482138 - 4482010
Alignment:
| Q |
34 |
ctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaata |
133 |
Q |
| |
|
|||||||||| |||| ||| ||||||| ||||||||| || |||| |||| || ||| | |||||||| ||||| ||||| |||||||| |||||| || |
|
|
| T |
4482138 |
ctttgatgaatttctggctaaacttcatgaatctgccactgctggtattatccccccagtcacttgcttagtttctgattgctacatgccatttacagta |
4482039 |
T |
 |
| Q |
134 |
gatgctgcggaagaacatgcactcccaat |
162 |
Q |
| |
|
|||||||| |||||||||||||||||||| |
|
|
| T |
4482038 |
gatgctgccgaagaacatgcactcccaat |
4482010 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 34 - 162
Target Start/End: Complemental strand, 4575728 - 4575600
Alignment:
| Q |
34 |
ctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaata |
133 |
Q |
| |
|
|||||||||||||||| ||| |||||| | ||||||| || |||| |||| || ||| | |||||||| ||||| ||||| |||||||| |||||| || |
|
|
| T |
4575728 |
ctttgatgaacttcttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagta |
4575629 |
T |
 |
| Q |
134 |
gatgctgcggaagaacatgcactcccaat |
162 |
Q |
| |
|
|||||||| ||||||||||| |||||||| |
|
|
| T |
4575628 |
gatgctgctgaagaacatgccctcccaat |
4575600 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 160
Target Start/End: Complemental strand, 4561935 - 4561809
Alignment:
| Q |
34 |
ctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaata |
133 |
Q |
| |
|
|||||||||||||||| ||| |||||| | ||||||| || |||| |||| || ||| | |||||||| ||||| ||||| |||||||| |||||| || |
|
|
| T |
4561935 |
ctttgatgaacttcttgctaaacttcaagactctgccactgctggtcttatccccccagtcacttgcttagtttctgattgctacatgccatttacagta |
4561836 |
T |
 |
| Q |
134 |
gatgctgcggaagaacatgcactccca |
160 |
Q |
| |
|
| |||||| |||||||||||||||||| |
|
|
| T |
4561835 |
gctgctgctgaagaacatgcactccca |
4561809 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 4298337 - 4298481
Alignment:
| Q |
18 |
agaacttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgtta |
117 |
Q |
| |
|
||||||||||||| ||||||| |||||||||| ||| ||||| | | ||||||| || |||| || | |||||| |||||||||| ||| | |||| || |
|
|
| T |
4298337 |
agaacttccttcagccctttggtgaacttcttgctaaacttcgtgattctgccactgctggtcttgtaccaccagttacttgcttagttgctgatttttt |
4298436 |
T |
 |
| Q |
118 |
catgccttttacaatagatgctgcggaagaacatgcactcccaat |
162 |
Q |
| |
|
||| | ||||| ||| | |||||||||||||||||||||||||| |
|
|
| T |
4298437 |
aatgtcatttaccatacaagctgcggaagaacatgcactcccaat |
4298481 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 4462498 - 4462343
Alignment:
| Q |
19 |
gaacttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttac |
118 |
Q |
| |
|
||||||| ||||||||||| |||||||||||| |||||| || ||||||| || | | |||| || || |||||||| | ||||| ||||||||| |
|
|
| T |
4462498 |
gaacttcattcaaccctttagtgaacttcttacaagacttgatgcctctgccactgccgatcttatccctccggttacttgcatagtttctgattgttac |
4462399 |
T |
 |
| Q |
119 |
atgccttttacaatagatgctgcggaagaacatgcactcccaatccttttcttttc |
174 |
Q |
| |
|
||||| |||||| | ||||| || ||| ||| ||||||||||||| || ||||||| |
|
|
| T |
4462398 |
atgccatttacagtggatgccgctgaacaacgtgcactcccaatcgttctcttttc |
4462343 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 162
Target Start/End: Complemental strand, 3173234 - 3173148
Alignment:
| Q |
76 |
tggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaatagatgctgcggaagaacatgcactcccaat |
162 |
Q |
| |
|
|||| |||| || ||| |||||||||| ||||||||||| || ||||| |||||| |||||| ||| ||||||||||| |||||||| |
|
|
| T |
3173234 |
tggtcttatacctccagttacttgctttgtttccgattgctatatgccatttacagtagatgttgctgaagaacatgctctcccaat |
3173148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 4489094 - 4489208
Alignment:
| Q |
76 |
tggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaatagatgctgcggaagaacatgcactcccaatccttttcttttct |
175 |
Q |
| |
|
|||| |||| || ||| |||||||||| ||||| ||||| | ||| | |||||| |||||||||| |||||||||||||||||||| || ||||||| |
|
|
| T |
4489094 |
tggtcttatccctccagttacttgcttagtttctgattgcaatatggcatttacagtagatgctgctgaagaacatgcactcccaattgttctcttttcc |
4489193 |
T |
 |
| Q |
176 |
ccatgcaatgcatct |
190 |
Q |
| |
|
||||| | ||||||| |
|
|
| T |
4489194 |
ccatgtagtgcatct |
4489208 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 84 - 162
Target Start/End: Original strand, 4255544 - 4255622
Alignment:
| Q |
84 |
ttccaccaattacttgcttggtttccgattgttacatgccttttacaatagatgctgcggaagaacatgcactcccaat |
162 |
Q |
| |
|
|||||| | |||||||||| ||||| |||||||||||| | ||||| ||| | ||||| ||||| |||||||||||||| |
|
|
| T |
4255544 |
ttccactagttacttgcttagtttctgattgttacatgtcatttaccatacaagctgctgaagagcatgcactcccaat |
4255622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 4458853 - 4458816
Alignment:
| Q |
222 |
tgattcgaaaaggtctactaccactcaaaggtaacaat |
259 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
4458853 |
tgattggaaaaggtctactaccactcaaaggtaacaat |
4458816 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 19 - 414
Target Start/End: Complemental strand, 24104383 - 24103978
Alignment:
| Q |
19 |
gaacttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttac |
118 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
24104383 |
gaacttccttcagccctttgatgaacttcttactagacttcatcaatctgccaatgatggtgttattccaccaattacttgcttagtttcggattgttac |
24104284 |
T |
 |
| Q |
119 |
atgccttttaca----atagatgctgcggaagaacatgcactcccaatccttttcttttctccatgcaatgcatctacgttcttgtgtacttttcaattt |
214 |
Q |
| |
|
||||| |||||| || ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
24104283 |
atgccatttacagttgatcgatgctgttgaagaacatgcactcccaattcttttcttttctccatgcaatgcatctaccttcttgtgtacttttcaatat |
24104184 |
T |
 |
| Q |
215 |
cctactctgattcgaaaaggtctactaccactcaaaggtaacaattatgatccnnnnnnnnnnnnaagagaaatgtgcatgaatctatat-----atgtg |
309 |
Q |
| |
|
|||| |||||||| |||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| || || |
|
|
| T |
24104183 |
cctaatctgattcaaaaaggtctagtaccactcaaaggtaaaaattatgatccttttttctttttaagagaaatgtgcatgattctatatatttaatttg |
24104084 |
T |
 |
| Q |
310 |
atcacgtttagggctgcatcagtcgcattgcgattatgtgcatcatcaaaatgacaacacaa-cacaattattactgggaacatgatttaaaatcttgat |
408 |
Q |
| |
|
||||| ||||||||||||||||||||| || |||||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||| || |
|
|
| T |
24104083 |
atcacacttagggctgcatcagtcgcatggcaattatgtgcatcattaaaatgacaacacaaccacaattattattggaaacatgatttaaaatctctat |
24103984 |
T |
 |
| Q |
409 |
gtgtgt |
414 |
Q |
| |
|
|||||| |
|
|
| T |
24103983 |
gtgtgt |
24103978 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 3088034 - 3087878
Alignment:
| Q |
18 |
agaacttccttcaaccctttgatgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgtta |
117 |
Q |
| |
|
|||||||| |||||||||||| |||||||||| | || ||||| | |||||| ||| |||| ||||||||||| |||||||||| || | |||| ||| |
|
|
| T |
3088034 |
agaacttcattcaaccctttggtgaacttcttcgtcgaattcatgactctgccgatgctggtcttattccaccagttacttgcttagtagctgattttta |
3087935 |
T |
 |
| Q |
118 |
catgccttttacaatagatgctgcggaagaacatgcactcccaatccttttcttttc |
174 |
Q |
| |
|
|||||| ||||| ||| | | ||| ||||| ||||||||||||||||| ||||||| |
|
|
| T |
3087934 |
catgccatttaccatacaagttgctgaagagaatgcactcccaatccttctcttttc |
3087878 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 39 - 260
Target Start/End: Original strand, 3382 - 3603
Alignment:
| Q |
39 |
atgaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaatagatgc |
138 |
Q |
| |
|
||||||||||| || ||||||| | ||||||| || |||| || |||||| | |||||||| | || | |||||||||||||| ||||| ||| | || |
|
|
| T |
3382 |
atgaacttcttgttaaacttcatgactctgccactgctggtcttgttccacaagttacttgcatagtcgctgattgttacatgccatttaccatacaagc |
3481 |
T |
 |
| Q |
139 |
tgcggaagaacatgcactcccaatccttttcttttctccatgcaatgcatctacgttcttgtgtacttttcaatttcctactctgattcgaaaaggtcta |
238 |
Q |
| |
|
||| |||||||||||||||||||| || ||||||| | ||| ||||| | | ||||||| | |||| || ||| ||| ||| ||| |||||| ||| |
|
|
| T |
3482 |
tgctgaagaacatgcactcccaattgttctcttttccaccggcagtgcatgttctttcttgtctgctttacacttttgtacactgtttcaaaaaggacta |
3581 |
T |
 |
| Q |
239 |
ctaccactcaaaggtaacaatt |
260 |
Q |
| |
|
|||||||||||||||| |||| |
|
|
| T |
3582 |
ataccactcaaaggtaaaaatt |
3603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 166
Target Start/End: Original strand, 2316 - 2441
Alignment:
| Q |
41 |
gaacttcttactagacttcatcaatctgccaatgatggttttattccaccaattacttgcttggtttccgattgttacatgccttttacaatagatgctg |
140 |
Q |
| |
|
||||||||| |||||||| | | ||||||||| |||| |||| || ||| | ||| |||| ||||| |||||||||||| | ||||| ||| | |||| |
|
|
| T |
2316 |
gaacttcttgctagacttgacgagtctgccaattctggtcttatccctccagtaactagcttagtttctgattgttacatgtcatttaccatacaagctg |
2415 |
T |
 |
| Q |
141 |
cggaagaacatgcactcccaatcctt |
166 |
Q |
| |
|
| |||||| ||||||||||||||||| |
|
|
| T |
2416 |
ctgaagaatatgcactcccaatcctt |
2441 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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