View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1140_low_28 (Length: 352)

Name: NF1140_low_28
Description: NF1140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1140_low_28
NF1140_low_28
[»] chr8 (62 HSPs)
chr8 (113-287)||(29603167-29603341)
chr8 (284-352)||(38107269-38107337)
chr8 (286-352)||(260147-260213)
chr8 (286-352)||(655708-655774)
chr8 (286-352)||(841443-841509)
chr8 (288-352)||(37933812-37933876)
chr8 (286-352)||(513477-513543)
chr8 (290-352)||(12010722-12010784)
chr8 (287-352)||(13797258-13797323)
chr8 (287-352)||(22683894-22683959)
chr8 (288-352)||(22684218-22684282)
chr8 (297-352)||(3876078-3876133)
chr8 (285-352)||(35443481-35443548)
chr8 (286-352)||(440656-440722)
chr8 (288-352)||(36739581-36739645)
chr8 (290-352)||(7435032-7435094)
chr8 (286-352)||(15846954-15847020)
chr8 (278-352)||(24430831-24430905)
chr8 (287-352)||(36399975-36400041)
chr8 (286-352)||(43468908-43468974)
chr8 (287-352)||(9884673-9884738)
chr8 (287-352)||(33652011-33652076)
chr8 (287-352)||(41536433-41536498)
chr8 (288-352)||(23935383-23935447)
chr8 (288-352)||(36341948-36342012)
chr8 (289-352)||(441010-441073)
chr8 (287-352)||(2533088-2533154)
chr8 (286-352)||(6016050-6016116)
chr8 (286-352)||(8137302-8137367)
chr8 (286-352)||(33651657-33651723)
chr8 (287-352)||(39295410-39295475)
chr8 (285-352)||(43806792-43806861)
chr8 (288-352)||(3875786-3875850)
chr8 (289-352)||(8137020-8137084)
chr8 (284-352)||(15847282-15847350)
chr8 (288-352)||(38208570-38208634)
chr8 (289-352)||(23972556-23972619)
chr8 (286-352)||(4648966-4649032)
chr8 (286-352)||(4649320-4649386)
chr8 (298-352)||(9056255-9056309)
chr8 (287-352)||(23972200-23972266)
chr8 (287-352)||(24430477-24430542)
chr8 (288-352)||(35443129-35443192)
chr8 (288-352)||(35884337-35884401)
chr8 (285-352)||(5720425-5720492)
chr8 (310-352)||(513148-513190)
chr8 (290-352)||(6016355-6016417)
chr8 (286-352)||(43806438-43806504)
chr8 (287-352)||(1293304-1293368)
chr8 (288-352)||(9056625-9056690)
chr8 (287-352)||(24193542-24193607)
chr8 (287-352)||(28496261-28496326)
chr8 (284-352)||(29485129-29485198)
chr8 (286-349)||(29485439-29485503)
chr8 (276-352)||(38633605-38633681)
chr8 (288-352)||(43469243-43469307)
chr8 (306-345)||(10162701-10162740)
chr8 (301-352)||(23935093-23935144)
chr8 (315-352)||(37933516-37933553)
chr8 (287-343)||(2533453-2533509)
chr8 (288-352)||(12010398-12010460)
chr8 (313-349)||(42988159-42988195)
[»] chr7 (66 HSPs)
chr7 (284-352)||(48628975-48629043)
chr7 (287-352)||(1469752-1469817)
chr7 (287-352)||(47272151-47272216)
chr7 (287-352)||(47294197-47294262)
chr7 (287-352)||(47271799-47271863)
chr7 (288-352)||(40851130-40851194)
chr7 (288-352)||(47294521-47294585)
chr7 (285-352)||(39033876-39033943)
chr7 (285-352)||(43968518-43968585)
chr7 (286-352)||(38427468-38427534)
chr7 (287-352)||(27364598-27364663)
chr7 (287-352)||(45723397-45723462)
chr7 (288-352)||(25801473-25801537)
chr7 (288-352)||(42888722-42888786)
chr7 (288-352)||(47120163-47120227)
chr7 (284-352)||(47281385-47281453)
chr7 (285-352)||(31684364-31684431)
chr7 (289-352)||(40851444-40851507)
chr7 (287-350)||(44544581-44544644)
chr7 (290-352)||(7336229-7336291)
chr7 (286-352)||(11476461-11476527)
chr7 (290-352)||(29739521-29739583)
chr7 (286-352)||(35600027-35600093)
chr7 (286-352)||(37354188-37354254)
chr7 (287-352)||(44544225-44544291)
chr7 (286-352)||(47218961-47219027)
chr7 (287-352)||(3797448-3797513)
chr7 (287-352)||(27772982-27773047)
chr7 (287-352)||(30876429-30876494)
chr7 (285-350)||(45233461-45233526)
chr7 (287-352)||(47219315-47219380)
chr7 (288-352)||(48628625-48628687)
chr7 (292-352)||(5106071-5106131)
chr7 (288-352)||(23842152-23842216)
chr7 (288-352)||(45233688-45233752)
chr7 (289-352)||(221445-221508)
chr7 (286-352)||(37393902-37393969)
chr7 (297-352)||(39241870-39241925)
chr7 (286-352)||(5106211-5106277)
chr7 (287-349)||(11476818-11476880)
chr7 (286-352)||(37394256-37394322)
chr7 (310-352)||(42889019-42889061)
chr7 (286-352)||(47578992-47579058)
chr7 (287-352)||(2960546-2960611)
chr7 (287-352)||(31684040-31684105)
chr7 (287-352)||(47119837-47119902)
chr7 (288-352)||(1469400-1469464)
chr7 (284-352)||(31793878-31793946)
chr7 (289-352)||(11050520-11050583)
chr7 (286-352)||(30972171-30972236)
chr7 (288-352)||(34378514-34378579)
chr7 (287-350)||(40520733-40520796)
chr7 (306-349)||(47579320-47579363)
chr7 (290-352)||(38427821-38427882)
chr7 (287-352)||(41139314-41139380)
chr7 (288-352)||(42979245-42979310)
chr7 (288-352)||(2960844-2960907)
chr7 (289-352)||(44551029-44551093)
chr7 (289-352)||(42979597-42979659)
chr7 (298-352)||(4923346-4923400)
chr7 (287-352)||(7335876-7335942)
chr7 (314-352)||(11050194-11050232)
chr7 (284-352)||(18353316-18353383)
chr7 (284-352)||(35600381-35600449)
chr7 (288-336)||(41107200-41107248)
chr7 (284-352)||(45723750-45723818)
[»] chr5 (82 HSPs)
chr5 (285-352)||(8215715-8215782)
chr5 (286-352)||(38964019-38964085)
chr5 (287-352)||(6252142-6252207)
chr5 (284-352)||(6331192-6331259)
chr5 (288-352)||(41282512-41282576)
chr5 (286-352)||(16095865-16095931)
chr5 (275-352)||(11935615-11935692)
chr5 (287-352)||(19659407-19659472)
chr5 (284-352)||(33760729-33760797)
chr5 (288-352)||(35342350-35342414)
chr5 (286-352)||(4016132-4016198)
chr5 (287-349)||(6332949-6333011)
chr5 (287-352)||(20079516-20079581)
chr5 (287-352)||(31710099-31710164)
chr5 (287-352)||(41282159-41282224)
chr5 (288-352)||(35155069-35155133)
chr5 (285-352)||(27116353-27116420)
chr5 (286-352)||(6600395-6600461)
chr5 (286-352)||(20408703-20408769)
chr5 (287-352)||(6251810-6251875)
chr5 (284-352)||(14717418-14717487)
chr5 (287-352)||(19661890-19661955)
chr5 (287-352)||(26593539-26593604)
chr5 (288-352)||(11000635-11000699)
chr5 (285-345)||(11935292-11935352)
chr5 (288-352)||(30863100-30863164)
chr5 (284-352)||(43166173-43166240)
chr5 (288-352)||(43166519-43166583)
chr5 (289-352)||(3351910-3351973)
chr5 (286-352)||(14717776-14717842)
chr5 (286-352)||(26035271-26035337)
chr5 (286-352)||(30298008-30298074)
chr5 (284-341)||(793824-793881)
chr5 (287-352)||(6600042-6600107)
chr5 (287-352)||(11000987-11001052)
chr5 (288-352)||(20408350-20408415)
chr5 (287-352)||(28078664-28078729)
chr5 (287-352)||(33003211-33003276)
chr5 (287-352)||(39125942-39126007)
chr5 (288-352)||(19398452-19398515)
chr5 (288-352)||(39824726-39824789)
chr5 (286-349)||(1827783-1827846)
chr5 (285-352)||(3352260-3352327)
chr5 (285-352)||(17002415-17002482)
chr5 (297-352)||(20516985-20517040)
chr5 (285-352)||(42993333-42993400)
chr5 (287-349)||(8216073-8216135)
chr5 (286-352)||(28078310-28078376)
chr5 (290-352)||(31710452-31710514)
chr5 (310-352)||(38964343-38964385)
chr5 (287-352)||(9919775-9919840)
chr5 (284-352)||(8689386-8689454)
chr5 (284-352)||(8689742-8689809)
chr5 (284-352)||(16751959-16752027)
chr5 (292-352)||(42263086-42263145)
chr5 (285-352)||(1052703-1052770)
chr5 (286-352)||(4015778-4015845)
chr5 (285-352)||(8694681-8694748)
chr5 (288-352)||(14952169-14952235)
chr5 (285-352)||(27457423-27457490)
chr5 (289-352)||(30208656-30208718)
chr5 (301-352)||(33760390-33760441)
chr5 (306-352)||(567767-567813)
chr5 (286-352)||(9919187-9919253)
chr5 (298-352)||(19398110-19398164)
chr5 (285-335)||(35861481-35861531)
chr5 (279-352)||(27115997-27116070)
chr5 (316-352)||(1052382-1052418)
chr5 (288-352)||(16752266-16752330)
chr5 (288-352)||(42993688-42993752)
chr5 (290-345)||(567657-567711)
chr5 (313-352)||(6739887-6739926)
chr5 (285-352)||(16096218-16096285)
chr5 (289-352)||(40075120-40075183)
chr5 (286-352)||(445104-445170)
chr5 (287-352)||(6740214-6740279)
chr5 (298-352)||(11692406-11692460)
chr5 (310-352)||(26593209-26593251)
chr5 (286-352)||(27457102-27457168)
chr5 (287-352)||(39824373-39824438)
chr5 (287-335)||(35341997-35342045)
chr5 (285-352)||(39401895-39401963)
[»] chr4 (87 HSPs)
chr4 (285-352)||(28264813-28264880)
chr4 (286-352)||(31591245-31591311)
chr4 (286-352)||(49118781-49118847)
chr4 (287-352)||(22298688-22298753)
chr4 (284-349)||(23135239-23135304)
chr4 (284-349)||(36444677-36444742)
chr4 (288-352)||(31208566-31208630)
chr4 (284-352)||(42273972-42274040)
chr4 (288-352)||(50276045-50276109)
chr4 (285-352)||(32118529-32118596)
chr4 (301-352)||(44490489-44490540)
chr4 (286-352)||(12196294-12196360)
chr4 (286-352)||(12196639-12196705)
chr4 (286-352)||(26017268-26017334)
chr4 (287-352)||(28264489-28264554)
chr4 (287-352)||(33173926-33173991)
chr4 (288-352)||(9339385-9339449)
chr4 (288-352)||(25734482-25734546)
chr4 (289-352)||(17993276-17993339)
chr4 (285-352)||(48551668-48551735)
chr4 (289-352)||(49118459-49118522)
chr4 (286-349)||(50276397-50276460)
chr4 (289-352)||(55517094-55517156)
chr4 (286-352)||(17847383-17847449)
chr4 (286-352)||(23134911-23134977)
chr4 (287-352)||(25730410-25730476)
chr4 (278-352)||(48551976-48552050)
chr4 (284-349)||(17992949-17993014)
chr4 (287-352)||(26017593-26017658)
chr4 (287-352)||(33807687-33807751)
chr4 (287-352)||(44490027-44490092)
chr4 (288-352)||(28812194-28812258)
chr4 (288-352)||(31973761-31973825)
chr4 (288-352)||(33693593-33693657)
chr4 (284-352)||(48707636-48707704)
chr4 (285-352)||(5227560-5227627)
chr4 (289-352)||(14564615-14564678)
chr4 (286-352)||(19496404-19496471)
chr4 (285-352)||(30141336-30141403)
chr4 (289-352)||(48149318-48149381)
chr4 (286-352)||(19169025-19169091)
chr4 (286-352)||(22298335-22298401)
chr4 (290-352)||(48707963-48708025)
chr4 (287-352)||(9339030-9339094)
chr4 (287-352)||(17847003-17847067)
chr4 (286-351)||(35790787-35790852)
chr4 (288-352)||(24622995-24623059)
chr4 (284-352)||(28159856-28159924)
chr4 (285-352)||(4544890-4544956)
chr4 (286-349)||(28160217-28160280)
chr4 (286-352)||(2055101-2055167)
chr4 (286-352)||(31208914-31208979)
chr4 (310-352)||(31590917-31590959)
chr4 (288-349)||(39995073-39995135)
chr4 (286-352)||(42549851-42549917)
chr4 (286-352)||(48149669-48149735)
chr4 (287-352)||(56555402-56555468)
chr4 (287-352)||(9800409-9800474)
chr4 (284-352)||(20534364-20534433)
chr4 (288-349)||(23553237-23553298)
chr4 (291-352)||(35930209-35930270)
chr4 (288-352)||(19496009-19496073)
chr4 (288-352)||(24458538-24458602)
chr4 (288-352)||(33174250-33174314)
chr4 (288-352)||(40988799-40988863)
chr4 (289-352)||(10588750-10588813)
chr4 (289-352)||(11795413-11795476)
chr4 (290-349)||(19168724-19168783)
chr4 (286-352)||(37381662-37381728)
chr4 (298-352)||(50542613-50542667)
chr4 (315-352)||(8433736-8433773)
chr4 (288-352)||(11795060-11795125)
chr4 (287-352)||(28812545-28812610)
chr4 (284-352)||(30467237-30467306)
chr4 (291-352)||(33452319-33452380)
chr4 (286-343)||(33496393-33496450)
chr4 (287-340)||(36444588-36444641)
chr4 (287-352)||(51371335-51371400)
chr4 (287-352)||(8881917-8881984)
chr4 (288-349)||(4545218-4545281)
chr4 (286-352)||(23552877-23552944)
chr4 (290-349)||(41355202-41355261)
chr4 (298-352)||(33496090-33496144)
chr4 (287-352)||(33808039-33808105)
chr4 (288-352)||(14564966-14565031)
chr4 (288-352)||(50542260-50542325)
chr4 (289-352)||(30466910-30466974)
[»] chr3 (89 HSPs)
chr3 (285-352)||(50287381-50287448)
chr3 (286-352)||(33151895-33151961)
chr3 (288-352)||(29677646-29677710)
chr3 (286-352)||(1687821-1687887)
chr3 (287-352)||(1016890-1016955)
chr3 (288-352)||(27070998-27071062)
chr3 (289-352)||(1017214-1017277)
chr3 (287-352)||(36315231-36315296)
chr3 (288-352)||(55164021-55164086)
chr3 (288-352)||(1687498-1687562)
chr3 (284-352)||(21656688-21656756)
chr3 (285-352)||(19664356-19664423)
chr3 (289-352)||(44798437-44798500)
chr3 (286-352)||(20760330-20760396)
chr3 (286-352)||(20813700-20813766)
chr3 (286-352)||(48651064-48651130)
chr3 (287-352)||(8097191-8097256)
chr3 (287-352)||(21564666-21564731)
chr3 (287-352)||(35346377-35346442)
chr3 (287-352)||(35608360-35608425)
chr3 (287-352)||(55164374-55164439)
chr3 (288-352)||(28699532-28699596)
chr3 (288-352)||(37248126-37248190)
chr3 (301-352)||(20759991-20760042)
chr3 (285-352)||(41251056-41251123)
chr3 (289-352)||(53196183-53196246)
chr3 (286-352)||(19268337-19268403)
chr3 (286-352)||(21564341-21564407)
chr3 (286-352)||(31122832-31122898)
chr3 (286-352)||(47329433-47329499)
chr3 (286-352)||(50364812-50364878)
chr3 (287-352)||(1448641-1448706)
chr3 (288-345)||(19229227-19229284)
chr3 (287-352)||(22851813-22851878)
chr3 (287-352)||(22852166-22852230)
chr3 (291-352)||(27070649-27070710)
chr3 (288-349)||(34019337-34019398)
chr3 (287-352)||(44152517-44152582)
chr3 (288-352)||(19228887-19228951)
chr3 (288-352)||(19268697-19268760)
chr3 (284-352)||(32650723-32650791)
chr3 (288-352)||(51475478-51475541)
chr3 (285-352)||(12748530-12748597)
chr3 (287-352)||(10618710-10618776)
chr3 (286-352)||(47473075-47473141)
chr3 (287-349)||(49799325-49799387)
chr3 (310-352)||(50287736-50287778)
chr3 (286-352)||(53926239-53926305)
chr3 (287-352)||(21890340-21890405)
chr3 (288-349)||(28193248-28193309)
chr3 (287-352)||(32651079-32651144)
chr3 (287-352)||(38446294-38446359)
chr3 (287-352)||(40922072-40922136)
chr3 (287-352)||(44152843-44152908)
chr3 (287-352)||(49799017-49799082)
chr3 (287-352)||(51562332-51562397)
chr3 (287-352)||(53925885-53925950)
chr3 (288-352)||(3696965-3697028)
chr3 (276-352)||(12748226-12748302)
chr3 (288-352)||(21656336-21656400)
chr3 (289-352)||(39069574-39069638)
chr3 (289-352)||(41250736-41250797)
chr3 (288-352)||(53195832-53195896)
chr3 (289-352)||(28699835-28699898)
chr3 (286-352)||(29677351-29677418)
chr3 (287-349)||(38446649-38446712)
chr3 (310-352)||(20813370-20813412)
chr3 (290-352)||(42107008-42107070)
chr3 (286-352)||(50978014-50978080)
chr3 (286-352)||(51081146-51081212)
chr3 (286-352)||(52821320-52821386)
chr3 (288-349)||(1448965-1449026)
chr3 (287-352)||(20086220-20086285)
chr3 (292-352)||(20086573-20086634)
chr3 (287-352)||(35608037-35608102)
chr3 (288-345)||(37372850-37372907)
chr3 (292-352)||(45380171-45380231)
chr3 (288-352)||(47329082-47329146)
chr3 (288-352)||(50977712-50977775)
chr3 (288-352)||(51080844-51080907)
chr3 (286-352)||(28775383-28775447)
chr3 (286-352)||(34019610-34019674)
chr3 (286-352)||(39069896-39069962)
chr3 (288-352)||(20914013-20914078)
chr3 (288-352)||(20922131-20922196)
chr3 (288-352)||(10618388-10618451)
chr3 (288-352)||(26455752-26455815)
chr3 (289-352)||(36314878-36314942)
chr3 (284-352)||(52820952-52821020)
[»] chr6 (46 HSPs)
chr6 (288-352)||(2707629-2707693)
chr6 (285-352)||(35224150-35224217)
chr6 (287-352)||(26393268-26393333)
chr6 (279-352)||(12613080-12613153)
chr6 (288-352)||(30457483-30457547)
chr6 (287-350)||(1915250-1915312)
chr6 (286-352)||(6503888-6503954)
chr6 (287-349)||(8178155-8178217)
chr6 (287-352)||(16193480-16193545)
chr6 (287-352)||(29050089-29050154)
chr6 (288-352)||(1915602-1915666)
chr6 (288-352)||(2643932-2643996)
chr6 (288-352)||(9382689-9382753)
chr6 (288-352)||(17943206-17943270)
chr6 (286-349)||(2598005-2598067)
chr6 (285-352)||(6785357-6785424)
chr6 (289-352)||(30378836-30378899)
chr6 (285-352)||(30379187-30379254)
chr6 (286-352)||(2390110-2390176)
chr6 (286-352)||(3258712-3258778)
chr6 (286-352)||(12626452-12626518)
chr6 (286-352)||(26392914-26392980)
chr6 (287-352)||(12626806-12626871)
chr6 (288-352)||(29050442-29050507)
chr6 (288-348)||(2707306-2707366)
chr6 (285-352)||(26196609-26196676)
chr6 (287-352)||(1077407-1077472)
chr6 (291-352)||(3259066-3259127)
chr6 (287-352)||(3408035-3408100)
chr6 (287-352)||(10256054-10256119)
chr6 (287-352)||(17942855-17942920)
chr6 (288-352)||(1077052-1077116)
chr6 (288-352)||(25820456-25820520)
chr6 (288-347)||(17514934-17514993)
chr6 (286-352)||(2390435-2390501)
chr6 (286-352)||(6785006-6785072)
chr6 (286-352)||(9382362-9382428)
chr6 (286-352)||(11133690-11133755)
chr6 (316-352)||(6503564-6503600)
chr6 (292-352)||(12612759-12612819)
chr6 (284-352)||(17428175-17428243)
chr6 (287-352)||(26936757-26936823)
chr6 (287-352)||(10256407-10256473)
chr6 (285-352)||(16193122-16193191)
chr6 (284-352)||(31376087-31376157)
chr6 (284-352)||(17428502-17428570)
[»] chr2 (71 HSPs)
chr2 (284-352)||(9276388-9276456)
chr2 (284-352)||(9331579-9331647)
chr2 (288-352)||(12759657-12759721)
chr2 (284-352)||(37838467-37838535)
chr2 (285-352)||(2456180-2456247)
chr2 (285-352)||(23673132-23673199)
chr2 (278-352)||(23671709-23671783)
chr2 (287-352)||(920839-920904)
chr2 (287-352)||(37732099-37732164)
chr2 (288-352)||(771883-771947)
chr2 (288-352)||(41500409-41500473)
chr2 (286-352)||(28650331-28650397)
chr2 (290-352)||(33106878-33106940)
chr2 (286-352)||(33107228-33107294)
chr2 (287-352)||(36444487-36444552)
chr2 (284-352)||(772205-772272)
chr2 (284-352)||(3358053-3358121)
chr2 (288-352)||(8899851-8899915)
chr2 (288-352)||(9276744-9276808)
chr2 (284-352)||(27328754-27328822)
chr2 (288-352)||(40854779-40854843)
chr2 (288-352)||(41178278-41178342)
chr2 (286-352)||(11949331-11949397)
chr2 (286-352)||(19180591-19180657)
chr2 (286-352)||(28650687-28650753)
chr2 (287-352)||(2056744-2056809)
chr2 (287-352)||(2094317-2094381)
chr2 (284-352)||(27328400-27328469)
chr2 (287-352)||(36211217-36211282)
chr2 (287-352)||(41177942-41178006)
chr2 (287-352)||(41500752-41500817)
chr2 (287-352)||(42630132-42630197)
chr2 (284-352)||(2057096-2057163)
chr2 (288-352)||(16246452-16246516)
chr2 (288-352)||(36444135-36444199)
chr2 (289-352)||(19915915-19915978)
chr2 (298-352)||(8899510-8899564)
chr2 (286-352)||(42629801-42629867)
chr2 (290-352)||(43249321-43249383)
chr2 (287-352)||(17484456-17484521)
chr2 (285-342)||(22066573-22066630)
chr2 (287-352)||(31214076-31214141)
chr2 (284-352)||(37654263-37654332)
chr2 (285-349)||(2094643-2094707)
chr2 (288-352)||(2314882-2314946)
chr2 (292-352)||(2455832-2455892)
chr2 (288-352)||(9331926-9331990)
chr2 (289-349)||(33865529-33865589)
chr2 (284-352)||(37838094-37838162)
chr2 (286-352)||(8396781-8396847)
chr2 (286-352)||(12760008-12760074)
chr2 (287-352)||(31187401-31187467)
chr2 (287-352)||(31195461-31195527)
chr2 (287-352)||(921192-921257)
chr2 (288-352)||(2315234-2315297)
chr2 (310-352)||(19180262-19180304)
chr2 (287-352)||(3430531-3430595)
chr2 (287-352)||(7297491-7297556)
chr2 (287-352)||(7378780-7378845)
chr2 (289-349)||(14630787-14630846)
chr2 (292-352)||(25087707-25087767)
chr2 (292-352)||(34253312-34253372)
chr2 (289-352)||(22066651-22066714)
chr2 (309-352)||(28216892-28216935)
chr2 (289-352)||(29737567-29737630)
chr2 (286-352)||(38750863-38750930)
chr2 (290-352)||(45123967-45124030)
chr2 (290-352)||(17484809-17484871)
chr2 (323-352)||(11949688-11949717)
chr2 (287-352)||(17270405-17270469)
chr2 (288-352)||(29737918-29737982)
[»] chr1 (104 HSPs)
chr1 (288-352)||(7651832-7651896)
chr1 (286-352)||(48802236-48802302)
chr1 (287-352)||(24204377-24204442)
chr1 (287-352)||(28425269-28425334)
chr1 (287-352)||(43396845-43396910)
chr1 (287-352)||(46825701-46825766)
chr1 (284-352)||(16508158-16508226)
chr1 (288-352)||(19274377-19274441)
chr1 (284-352)||(38473885-38473953)
chr1 (288-352)||(41105834-41105898)
chr1 (288-352)||(52146840-52146904)
chr1 (281-352)||(34969643-34969714)
chr1 (285-352)||(50690113-50690180)
chr1 (286-352)||(36157936-36158002)
chr1 (287-352)||(46051620-46051685)
chr1 (287-352)||(49594868-49594933)
chr1 (288-352)||(19315458-19315522)
chr1 (288-352)||(21965235-21965299)
chr1 (288-352)||(22351032-22351096)
chr1 (285-352)||(50099035-50099102)
chr1 (289-352)||(52350183-52350246)
chr1 (282-352)||(12964802-12964872)
chr1 (286-352)||(37217066-37217132)
chr1 (286-352)||(46051295-46051361)
chr1 (287-352)||(19315810-19315875)
chr1 (287-352)||(24036578-24036643)
chr1 (287-352)||(25800811-25800876)
chr1 (287-352)||(34971238-34971303)
chr1 (284-349)||(52349856-52349921)
chr1 (288-352)||(9878691-9878755)
chr1 (292-352)||(12142916-12142976)
chr1 (288-352)||(18782348-18782412)
chr1 (288-352)||(24204729-24204793)
chr1 (288-352)||(25800461-25800525)
chr1 (284-352)||(26070062-26070130)
chr1 (288-352)||(37216714-37216778)
chr1 (292-352)||(46825351-46825411)
chr1 (289-352)||(5401040-5401103)
chr1 (285-352)||(9962921-9962988)
chr1 (285-352)||(26549558-26549625)
chr1 (285-352)||(33325897-33325964)
chr1 (286-352)||(44977126-44977193)
chr1 (285-352)||(45670390-45670457)
chr1 (286-352)||(26549204-26549270)
chr1 (287-349)||(43396521-43396583)
chr1 (290-352)||(44978677-44978739)
chr1 (292-352)||(9974663-9974724)
chr1 (287-352)||(33673834-33673899)
chr1 (287-351)||(18917695-18917759)
chr1 (284-352)||(19274729-19274796)
chr1 (284-352)||(23228453-23228521)
chr1 (288-352)||(23767322-23767386)
chr1 (284-352)||(24036699-24036766)
chr1 (288-352)||(26069711-26069774)
chr1 (292-352)||(52147163-52147223)
chr1 (297-352)||(38473542-38473597)
chr1 (286-352)||(30281781-30281847)
chr1 (286-352)||(33194576-33194642)
chr1 (306-352)||(46095000-46095046)
chr1 (290-352)||(46095334-46095396)
chr1 (287-352)||(16705716-16705781)
chr1 (279-352)||(45670716-45670789)
chr1 (287-352)||(49973759-49973824)
chr1 (285-349)||(6711644-6711708)
chr1 (288-352)||(16505144-16505208)
chr1 (292-352)||(16706040-16706100)
chr1 (292-352)||(18892180-18892240)
chr1 (288-352)||(18917343-18917407)
chr1 (288-352)||(25988178-25988242)
chr1 (288-352)||(45350625-45350688)
chr1 (289-352)||(12143242-12143303)
chr1 (301-352)||(17990026-17990077)
chr1 (285-352)||(32373811-32373878)
chr1 (298-352)||(36157594-36157649)
chr1 (286-352)||(40721195-40721262)
chr1 (298-352)||(45350974-45351029)
chr1 (290-352)||(50689792-50689855)
chr1 (290-352)||(7553275-7553336)
chr1 (286-352)||(23767673-23767739)
chr1 (290-352)||(33194881-33194943)
chr1 (286-352)||(36781077-36781143)
chr1 (306-352)||(40721513-40721559)
chr1 (288-352)||(48802582-48802645)
chr1 (286-352)||(49595201-49595267)
chr1 (287-352)||(7552922-7552987)
chr1 (299-352)||(36781402-36781455)
chr1 (284-352)||(6710916-6710983)
chr1 (288-352)||(18781996-18782060)
chr1 (297-352)||(34868578-34868634)
chr1 (288-348)||(50533201-50533261)
chr1 (289-352)||(5400690-5400753)
chr1 (289-352)||(21929696-21929758)
chr1 (290-345)||(43380672-43380727)
chr1 (290-352)||(49094619-49094682)
chr1 (284-327)||(52067553-52067596)
chr1 (286-352)||(4245132-4245198)
chr1 (306-352)||(6711610-6711656)
chr1 (290-352)||(7651509-7651571)
chr1 (288-352)||(23228099-23228165)
chr1 (286-352)||(49094970-49095036)
chr1 (287-352)||(49814116-49814182)
chr1 (287-352)||(49814470-49814536)
chr1 (310-352)||(49974004-49974046)
chr1 (287-352)||(7609025-7609090)
[»] scaffold0338 (1 HSPs)
scaffold0338 (288-352)||(5770-5834)
[»] scaffold0717 (1 HSPs)
scaffold0717 (284-352)||(2016-2084)
[»] scaffold0117 (1 HSPs)
scaffold0117 (284-352)||(14492-14560)
[»] scaffold0031 (1 HSPs)
scaffold0031 (288-352)||(101260-101324)
[»] scaffold0004 (2 HSPs)
scaffold0004 (284-352)||(218670-218737)
scaffold0004 (284-352)||(219056-219124)
[»] scaffold0005 (2 HSPs)
scaffold0005 (289-352)||(252697-252760)
scaffold0005 (288-352)||(252344-252409)
[»] scaffold0184 (1 HSPs)
scaffold0184 (286-352)||(12911-12977)
[»] scaffold0078 (1 HSPs)
scaffold0078 (286-352)||(59867-59933)
[»] scaffold0952 (1 HSPs)
scaffold0952 (284-352)||(3275-3343)
[»] scaffold0727 (2 HSPs)
scaffold0727 (288-349)||(5358-5419)
scaffold0727 (286-352)||(4998-5065)
[»] scaffold0122 (1 HSPs)
scaffold0122 (287-344)||(11182-11239)
[»] scaffold0693 (1 HSPs)
scaffold0693 (288-352)||(4935-4998)
[»] scaffold1562 (1 HSPs)
scaffold1562 (284-352)||(738-808)
[»] scaffold1158 (1 HSPs)
scaffold1158 (284-352)||(1785-1855)
[»] scaffold0096 (1 HSPs)
scaffold0096 (284-352)||(47776-47844)
[»] scaffold1986 (1 HSPs)
scaffold1986 (287-349)||(258-321)
[»] scaffold0416 (1 HSPs)
scaffold0416 (287-327)||(6589-6629)


Alignment Details
Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 113 - 287
Target Start/End: Original strand, 29603167 - 29603341
Alignment:
Q  113 tcataaataaaggagtctgggtttgaaccttagtccagcttagaatctaacactttcttcatttatcttatttgattgaatgtgtcggatatttttgcaa 212  Q
    ||||||||| || ||||||| |||||||||| ||||||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29603167 tcataaatagagtagtctggatttgaaccttggtccagcgtacaacctaacactttcttcatttatcttatttgattgaatgtgtcggatatttttgcaa 29603266  T
Q  213 caaatctaaaatcttataagcatcttttgagattctttctttgaggtccaaagaacttttgcattatattctata 287  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  29603267 caaatctaaaatcttataagcatcttttgaaattctttctttgaggtccaaagaacttttgcattatattgtata 29603341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 38107337 - 38107269
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  38107337 tataggtcaaatgcatctaaatgtcctttaagtttttcatttttcccgaagtcgtcctttaagtttcaa 38107269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 260213 - 260147
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  260213 taggtcaaatgcatctaaatgtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaa 260147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 655708 - 655774
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  655708 taggtcaaatgcatctaaatgtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaa 655774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 841443 - 841509
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  841443 taggtcaaatgcatctaaatgtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaa 841509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 37933876 - 37933812
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  37933876 ggtcaaatgcatctaaaagtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 37933812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 513543 - 513477
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  513543 taggtcaaatgcatctaaaagtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaa 513477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 12010784 - 12010722
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12010784 tcaaatgcatctaaatgtcctttaagtttttcatttttcccaaagtggtcctttaagtttcaa 12010722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 13797323 - 13797258
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  13797323 aggtcaaatgcatctaaaggtcttttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 13797258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 22683894 - 22683959
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  22683894 aggtcaaatgcatctaaagctcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 22683959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 22684282 - 22684218
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  22684282 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 22684218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 3876133 - 3876078
Alignment:
Q  297 catctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3876133 catctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 3876078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 35443548 - 35443481
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  35443548 ataggtcaaatgcatctaaaggtcctttaagattttcatttttcccaaagtggtcctttaagtttcaa 35443481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 440656 - 440722
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  440656 taggtcaaatacatctaaagatcctttaagtttttcgtttttcccaaagtcgtcatttaagtttcaa 440722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 36739645 - 36739581
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  36739645 ggtcaaatacatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 36739581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 7435094 - 7435032
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  7435094 tcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 7435032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 15846954 - 15847020
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  15846954 taggtcaaatgcatctaaaggtcctttaagttgttcgtttttcccaaagtggtcctttaagtttcaa 15847020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 24430905 - 24430831
Alignment:
Q  278 atattctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||||||||||| |||||||| |||||||||||||||| ||||||| ||||| || |||||||||||||    
T  24430905 atattttataggtcaaatgcatctaaaggtcctttaagtttttcgtttttcctaaagtggttctttaagtttcaa 24430831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 36399975 - 36400041
Alignment:
Q  287 aggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  36399975 aggtcaaatgcatctaaaggtccttttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 36400041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 43468908 - 43468974
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||  |||||||||||||||    
T  43468908 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtgatcctttaagtttcaa 43468974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 9884673 - 9884738
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||  ||||||||||||||||    
T  9884673 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagcagtcctttaagtttcaa 9884738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 33652076 - 33652011
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  33652076 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcctaaagtggtcttttaagtttcaa 33652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 41536433 - 41536498
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||||||||||||||||  |||||||||| ||||||||||||    
T  41536433 aggtcaaatgcatctaaaggtcctttaagtttttcatttttttcaaagtcgtcttttaagtttcaa 41536498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 23935447 - 23935383
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||| || ||||||||||||| ||||| ||||||| ||||||||||||||||    
T  23935447 ggtcaaatacatctaaaggtgctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 23935383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 36342012 - 36341948
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||| |||| |||||||||||||    
T  36342012 ggtcaaatgcatctaaaagtcctttaaatttttcatttttcccaaaatcgttctttaagtttcaa 36341948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 441073 - 441010
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||  ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  441073 gtcaaatgtatctaaaggtcctttaagtttttcatttttcctaaagttgtcctttaagtttcaa 441010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 2533088 - 2533154
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||| |||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||    
T  2533088 aggttaaatgcatctaaaggtcctttaagttttttcgtttttcccaaagtcgtcctttaagtttcaa 2533154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 6016050 - 6016116
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| |||||||||||||||||||||||| |||||  |||||||||||||||    
T  6016050 taggtcaaatgcatttaaaagtcctttaagtttttcatttttccaaaagtgatcctttaagtttcaa 6016116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 8137367 - 8137302
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  8137367 taggtcaaatgcatctaaaggtcctttaagtttttca-ttttctcaaagtggtcctttaagtttcaa 8137302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 33651657 - 33651723
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| |||||  |||||||||| ||||||||||||    
T  33651657 taggtcaaatgcatctaaaagtcctttaagtttttcgtttttttcaaagtcgtcttttaagtttcaa 33651723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 39295475 - 39295410
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| ||||||||||||| ||| |||||||||||| ||||||||||||| || |||||||||||||    
T  39295475 aggttaaatacatctaaaggtcttttaagtttttcgtttttcccaaagtggttctttaagtttcaa 39295410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 43806861 - 43806792
Alignment:
Q  285 ataggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcc-tttaagtttcaa 352  Q
    ||||||||||| |||||||||||||||| ||||||| ||||||||||||||| |||| ||||||||||||    
T  43806861 ataggtcaaatgcatctaaatgtccttttaagttttccatttttcccaaagtagtccttttaagtttcaa 43806792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 3875786 - 3875850
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||| ||||||| ||| ||||||||||||    
T  3875786 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcatttaagtttcaa 3875850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 8137020 - 8137084
Alignment:
Q  289 gtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||||||||||| ||||||||| ||||| |||||||| |||||||||||||||    
T  8137020 gtcaaatgcatctaaatgtccttttaagtttttcgttttttccaaagtcatcctttaagtttcaa 8137084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 15847350 - 15847282
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||||| || ||  |||||||||||||||||||| ||||| ||||||||||||||||    
T  15847350 tataggtcaaatgcatcttaaggttttttaagtttttcatttttcctaaagtggtcctttaagtttcaa 15847282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 38208570 - 38208634
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||| |||| ||||||||||||||| ||||||  |||||||||||||||||||||||    
T  38208570 ggtcaaagacatttaaaggtcctttaagttttttatttttttcaaagtcgtcctttaagtttcaa 38208634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 23972619 - 23972556
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||||||||  ||||||||||||||| |||||| |||| ||||||||||||||||||    
T  23972619 gtcaaatgcatctaaagctcctttaagtttttcgtttttctcaaactcgtcctttaagtttcaa 23972556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 4648966 - 4649032
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||  ||||||||||||    
T  4648966 taggtcaaatgcatctaaaagtcctttaagtttttcgttttttccaaagtggttatttaagtttcaa 4649032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 4649386 - 4649320
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||| |||||||| |||||| ||||||||||||||||||||||  ||| ||||||||||||    
T  4649386 taggttaaatgcatctaaaggtccttcaagtttttcatttttcccaaagcggtcatttaagtttcaa 4649320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 9056255 - 9056309
Alignment:
Q  298 atctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||||||||||||||||| |||||||||||  |||||||||||    
T  9056255 atctaaaggtcctttaagtttttcattttttccaaagtcgtctcttaagtttcaa 9056309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 23972200 - 23972266
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttt-tcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||| |||| ||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  23972200 aggtcaaatgcatataaaggtcctttaagttttttattttttcccaaagtggtcctttaagtttcaa 23972266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 24430477 - 24430542
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||||  |||||| ||| ||||||||||||    
T  24430477 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtggtcttttaagtttcaa 24430542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 35443129 - 35443192
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  35443129 ggtcaaatgtatctaaaggtc-tttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 35443192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 35884337 - 35884401
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||| | ||| ||||||  ||||||||    
T  35884337 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcctagagtggtccttagagtttcaa 35884401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 5720425 - 5720492
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||  |||||| |||| | ||| ||||||||||||    
T  5720425 ataggtcaaatgcatctaaaggtcctttaagttttttgtttttctcaaaatggtcatttaagtttcaa 5720492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 513148 - 513190
Alignment:
Q  310 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||| ||||||||||||||||||||||||    
T  513148 tttaagtttttaattttttccaaagtcgtcctttaagtttcaa 513190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 6016417 - 6016355
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| |||||||||||||||| ||||||| |||||  || ||||||||||||    
T  6016417 tcaaatgcatctaaaggtcctttaagtttttcgtttttcctaaagtgatcatttaagtttcaa 6016355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 43806438 - 43806504
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||  ||| |||||||||||||||| ||||||  ||||| ||||||||||||||||    
T  43806438 taggtcaaatgcattcaaaggtcctttaagtttttcgtttttcttaaagtggtcctttaagtttcaa 43806504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 1293304 - 1293368
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||||| ||||||||||||| |||||| |||||| |  |||||||||||||    
T  1293304 aggtcaaatgcatctaaatgttctttaagtttttcgtttttctcaaagt-gatctttaagtttcaa 1293368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 9056690 - 9056625
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagt-ttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||||| ||||| |||||  ||||||| |||||||||||||||    
T  9056690 ggtcaaatgcatctaaaggtcctttaagttttttcgtttttttcaaagtcatcctttaagtttcaa 9056625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 24193607 - 24193542
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||| |||| |||||||||||||||| |||||  |||||| ||| ||||||||||||    
T  24193607 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttttcaaagtggtcatttaagtttcaa 24193542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 28496261 - 28496326
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||| ||||||||||||   ||||| ||| ||||||||||||    
T  28496261 aggtcaaatgcatctaaaagtcctttaaatttttcattttttataaagtggtcatttaagtttcaa 28496326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 29485129 - 29485198
Alignment:
Q  284 tataggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||| |||||||| ||||||| ||||||| | ||||||||||||| ||| ||||||||||||    
T  29485129 tataggttaaatgcatctaaaagtccttttaagttttccgtttttcccaaagtggtcttttaagtttcaa 29485198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 29485503 - 29485439
Alignment:
Q  286 taggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||||| |||||||| ||||||| ||||||||| |||||| |||||| ||| |||||||||    
T  29485503 taggtcaaatgcatctaaaagtccttttaagtttttcgtttttcacaaagtagtcttttaagttt 29485439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 38633605 - 38633681
Alignment:
Q  276 ttatattctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||||||| | |||||| ||| |||||||||||  ||||| | ||||| ||| ||||||||||||    
T  38633605 ttatattatataggtcaaatgcgtctaaaggtcttttaagttttttgttttttctaaagtggtcttttaagtttcaa 38633681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 43469307 - 43469243
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||| ||| |||||||||||  |||||| |||| |  |||||||||||||||    
T  43469307 ggtcaaatacatctaaaagtcttttaagttttttgtttttctcaaaatgatcctttaagtttcaa 43469243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 306 - 345
Target Start/End: Complemental strand, 10162740 - 10162701
Alignment:
Q  306 gtcctttaagtttttcatttttcccaaagtcgtcctttaa 345  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  10162740 gtcctttaagtttttcgtttttcccaaagtggtcctttaa 10162701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 23935093 - 23935144
Alignment:
Q  301 taaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||||||||||||| ||||| ||||||| ||| ||||||||||||    
T  23935093 taaatgttctttaagtttttcgttttttccaaagtggtcatttaagtttcaa 23935144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 37933516 - 37933553
Alignment:
Q  315 gtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  37933516 gtttttcgttttttccaaagtcgtcctttaagtttcaa 37933553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 343
Target Start/End: Complemental strand, 2533509 - 2533453
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtccttt 343  Q
    ||||||||| ||||||||  || |||||||||||||||||| | |||||| ||||||    
T  2533509 aggtcaaatgcatctaaaactcatttaagtttttcattttttcaaaagtcatccttt 2533453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 12010398 - 12010460
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||| ||||| |||||||| ||| |||||||||||    
T  12010398 ggtcaaatgcatctaaaggtc-tttaagtttttcgttttt-ccaaagtcatccgttaagtttcaa 12010460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 349
Target Start/End: Original strand, 42988159 - 42988195
Alignment:
Q  313 aagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  42988159 aagtttttcattttttccaaagtcgtcatttaagttt 42988195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 48629043 - 48628975
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  48629043 tataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 48628975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 1469817 - 1469752
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  1469817 aggtcaaatgcatctaaatgtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 1469752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 47272216 - 47272151
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47272216 aggtcaaatgcatctaaatgtcctttaagtttttcatttttcccaaagtcgtcatttaagtttcaa 47272151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 47294197 - 47294262
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47294197 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 47294262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 47271799 - 47271863
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47271799 aggtcaaatgcatctaaatgtcctttaagtttttcatttttcccaaagtcgt-ctttaagtttcaa 47271863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 40851130 - 40851194
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  40851130 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 40851194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 47294585 - 47294521
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  47294585 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaa 47294521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 39033876 - 39033943
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  39033876 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtcgtcctttaagtttcaa 39033943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 43968585 - 43968518
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  43968585 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtgtcaa 43968518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 38427468 - 38427534
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  38427468 taggtcagatacatctaaaggtcctttaagtttttcatttttctcaaagtcgtcttttaagtttcaa 38427534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 27364663 - 27364598
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  27364663 aggtcaaatgcatctaaatgtcctttaaggttttcgtttttcccaaagtggtcctttaagtttcaa 27364598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 45723397 - 45723462
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  45723397 aggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgttctttaagtttcaa 45723462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 25801473 - 25801537
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  25801473 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtggtcctttaagtttcaa 25801537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 42888722 - 42888786
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  42888722 ggtcaaatgcatctaaaggtcatttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 42888786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 47120227 - 47120163
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||  |||||||||||||||    
T  47120227 ggtcaaatgcatctaaatgtcctttaagtttttcattttttccaaagtgatcctttaagtttcaa 47120163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 47281453 - 47281385
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  47281453 tataggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 47281385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 31684431 - 31684364
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||| ||||||| ||||||| ||||||||||||||||    
T  31684431 ataggtcaaatgcatctaaaggtcctttaagttttgcattttttccaaagtggtcctttaagtttcaa 31684364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 40851507 - 40851444
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  40851507 gtcaaatgcatctaaatgtcctttaagtttttcattttttttaaagtcgtcctttaagtttcaa 40851444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 350
Target Start/End: Complemental strand, 44544644 - 44544581
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttc 350  Q
    |||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  44544644 aggtcaaatgtatctaaagatcctttaagtttttcatttttcccaaagtcgtcctttaagtttc 44544581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 7336291 - 7336229
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  7336291 tcaaatgcatctaaaggtcctttaagtttttcatttttttcaaagtcgtcctttaagtttcaa 7336229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 11476461 - 11476527
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||  ||||||||||||| ||||||||||||||||    
T  11476461 taggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaa 11476527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 29739521 - 29739583
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  29739521 tcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtagtcctttaagtttcaa 29739583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 35600027 - 35600093
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||| |||| ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  35600027 taggtcaaatacatttaaaggtcctttaagtttttcatttttttcaaagtggtcctttaagtttcaa 35600093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 37354188 - 37354254
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| || |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  37354188 taggtcatatgcatctaaaagtcctttaagtttttcgtttttcccaaagttgtcctttaagtttcaa 37354254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 44544225 - 44544291
Alignment:
Q  287 aggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  44544225 aggtcaaatgcatctaaatgtccttttaagtttttcgttttttccaaagtcgtcctttaagtttcaa 44544291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 47218961 - 47219027
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||| | ||||||||||||||| ||||||||||||||    
T  47218961 taggtcaaatgcatctaaaggtcctttaagttttacgtttttcccaaagtcgacctttaagtttcaa 47219027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 3797448 - 3797513
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  3797448 aggtcaaatgcatctaaaagtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 3797513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 27772982 - 27773047
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||| ||||||    
T  27772982 aggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaaatttcaa 27773047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 30876494 - 30876429
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||| |||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  30876494 aggtcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 30876429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 45233461 - 45233526
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttc 350  Q
    |||||| ||||  ||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  45233461 ataggttaaatgtatctaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttc 45233526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 47219380 - 47219315
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||| |||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  47219380 aggtcaaatgcatttaaaggtcctttaagtttttcatttttttcaaagtcgtcctttaagtttcaa 47219315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 48628625 - 48628687
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||  |||||||||||||||||||||||||||||||||||||||||||    
T  48628625 ggtcaaatgcatctaaaggt--tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 48628687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 5106071 - 5106131
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  5106071 aaatgcatttaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 5106131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 23842152 - 23842216
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||    
T  23842152 ggtcaaatgcatctaaaagtcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 23842216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 45233752 - 45233688
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||| ||||||||||||  |||||||||||||||||||||||    
T  45233752 ggtcaaatgcatctaaaggtcctttaaatttttcatttttttcaaagtcgtcctttaagtttcaa 45233688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 221508 - 221445
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||| |||||||||||||||||| | ||||||||||||||||||||||    
T  221508 gtcaaatgcatctaaaagtcttttaagtttttcattttttcgaaagtcgtcctttaagtttcaa 221445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 37393902 - 37393969
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  37393902 taggtcaaatgcatctaaaagtcctttaagttttttcgtttttcccaaagtggtcctttaagtttcaa 37393969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 39241925 - 39241870
Alignment:
Q  297 catctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||||||||||||    
T  39241925 catctaaaggtcctttaagtttttcatttttcccaaagtgatcctttaagtttcaa 39241870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 5106277 - 5106211
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||  |||||||||||||||||| ||||| ||||||||||||||||||    
T  5106277 taggtcaaatgcatctaaaggttatttaagtttttcattttttccaaaatcgtcctttaagtttcaa 5106211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 11476880 - 11476818
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||| |||||||| |||||||||||||||| ||||||| ||||| |||||||||||||    
T  11476880 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcctaaagtggtcctttaagttt 11476818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 37394322 - 37394256
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||| |||||||| || ||||||||||||| ||||||||||||| ||||||||||||||||    
T  37394322 taggttaaatgcatctaaaggttctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 37394256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 42889061 - 42889019
Alignment:
Q  310 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42889061 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 42889019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 47578992 - 47579058
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||   |||||||||||||||||||||| |||||| ||||||||||||||||    
T  47578992 taggtcaaatgcatctaatgatcctttaagtttttcatttttctcaaagtggtcctttaagtttcaa 47579058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 2960546 - 2960611
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||| ||| |||||| |||||| ||||||||||||||||    
T  2960546 aggtcaaatgcatctaaaggtcctttaagttgttcgtttttctcaaagtggtcctttaagtttcaa 2960611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 31684040 - 31684105
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||  |||||||| ||||||||||||||||    
T  31684040 aggtcaaatgcatctaaaggtcctttaagtttttcgtttcccccaaagtggtcctttaagtttcaa 31684105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 47119837 - 47119902
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||||  |||||| ||||||||||||||||    
T  47119837 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtggtcctttaagtttcaa 47119902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 1469400 - 1469464
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  1469400 ggtcaaatgtatctaaaggtcttttaagtttttcatttttcctaaagtggtcctttaagtttcaa 1469464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 31793946 - 31793878
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||| |||||||| ||||||||||||||| ||||||| |||||| ||| ||||||||||||    
T  31793946 tataggtgaaatgcatctaaaggtcctttaagttttttatttttctcaaagtggtcttttaagtttcaa 31793878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 11050583 - 11050520
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||  ||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||    
T  11050583 gtcaaatgtatctaaaggtcctttaagtttttcgtttttcccaaattggtcctttaagtttcaa 11050520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 30972236 - 30972171
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||| ||||||||||||  |||||||||||||||| ||||||||||||    
T  30972236 taggtcaaatgcatctaaaggtc-tttaagtttttcgattttcccaaagtcgtcttttaagtttcaa 30972171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 34378514 - 34378579
Alignment:
Q  288 ggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||| |||| ||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  34378514 ggtcaaatgcatttaaaggtccttttaagtttttcattttttccaaagtcgtcctttaaatttcaa 34378579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 40520733 - 40520796
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttc 350  Q
    ||||||||||||||||||  || ||||| |||||| ||||| ||||||| ||||||||||||||    
T  40520733 aggtcaaatacatctaaagatcttttaaatttttcgttttttccaaagtggtcctttaagtttc 40520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Complemental strand, 47579363 - 47579320
Alignment:
Q  306 gtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  47579363 gtcctttaagtttttcgtttttctcaaagtcgtcctttaagttt 47579320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 38427882 - 38427821
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| |||||||||||||||  ||||||| ||| ||||||||||||||||||    
T  38427882 tcaaatgcatctaaaggtcctttaagttttttgtttttcctaaa-tcgtcctttaagtttcaa 38427821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 41139314 - 41139380
Alignment:
Q  287 aggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||  ||||||| ||||||| ||||||||||||||| ||||||| || |||||||||||||    
T  41139314 aggtcaaatgtatctaaaggtccttttaagtttttcattttttccaaagttgtactttaagtttcaa 41139380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 42979245 - 42979310
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcc-tttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||| | |||||  ||| ||||||||||||    
T  42979245 ggtcaaatgcatctaaaggtcctttaagtttttcattttttcaaaagtgttccttttaagtttcaa 42979310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 2960907 - 2960844
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| ||| |||||||||||| ||||||| ||||| ||||||||||||||||    
T  2960907 ggtcaaatgtatctaaaggtc-tttaagtttttcgtttttcctaaagtggtcctttaagtttcaa 2960844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 44551093 - 44551029
Alignment:
Q  289 gtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||| |||| ||||||| ||||||||| ||||||| ||||| ||||||||||||||||    
T  44551093 gtcaaatgcatttaaaggtccttttaagtttttcgtttttcctaaagtggtcctttaagtttcaa 44551029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 42979659 - 42979597
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||| ||  |||||||||||| |||||  |||||||||||||||||||||||    
T  42979659 gtcaaatatatctaaaggtt-tttaagtttttcgtttttttcaaagtcgtcctttaagtttcaa 42979597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 4923400 - 4923346
Alignment:
Q  298 atctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||  ||||||||||||||| ||||||| |||||  |||||||||||||||    
T  4923400 atctaaagatcctttaagtttttcgtttttcctaaagtaatcctttaagtttcaa 4923346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 7335876 - 7335942
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaag-tttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| |||||| |||||| ||||| ||||| ||||| ||||||||||||    
T  7335876 aggtcaaatgcatctaaaggtcttttaagttttttcgttttttccaaaatcgtcatttaagtttcaa 7335942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 352
Target Start/End: Original strand, 11050194 - 11050232
Alignment:
Q  314 agtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||||||| ||||||||||||||||    
T  11050194 agtttttcgtttttcccaaagtggtcctttaagtttcaa 11050232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 18353383 - 18353316
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| ||||||| |||||||| || ||||||||||||| ||||| | ||||| || |||||||||||||    
T  18353383 tataagtcaaatgcatctaaaagttctttaagtttttcgttttttctaaagtggt-ctttaagtttcaa 18353316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 35600449 - 35600381
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||| |||| |||| ||||||||||  |||||   ||||| ||||||||||||||||    
T  35600449 tataggtcaaatgcatttaaaagtccattaagttttttgttttttttaaagtggtcctttaagtttcaa 35600381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 41107200 - 41107248
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtc 336  Q
    |||||||| ||||||||||| |||||| |||||| ||||| ||||||||    
T  41107200 ggtcaaatgcatctaaatgttctttaaatttttcgttttttccaaagtc 41107248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 45723818 - 45723750
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||| ||||  || |||||||||||| |||||| ||||||  | |||||||||||||    
T  45723818 tataggtcaaatgcatttaaagatcatttaagtttttcgtttttctcaaagttattctttaagtttcaa 45723750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 2e-25; HSPs: 82)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 8215715 - 8215782
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8215715 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 8215782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 38964019 - 38964085
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  38964019 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 38964085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 6252207 - 6252142
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6252207 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 6252142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 6331192 - 6331259
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6331192 tataggtcaaatgcatctaaatgtcctttaagtttttca-ttttcccaaagtcgtcctttaagtttcaa 6331259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 41282576 - 41282512
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41282576 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 41282512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 16095865 - 16095931
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  16095865 taggtcaaatgcatctaaaagtcctttaagtttttcatttttccaaaagtcgtcctttaagtttcaa 16095931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 352
Target Start/End: Complemental strand, 11935692 - 11935615
Alignment:
Q  275 attatattctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| | ||| ||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11935692 attatattttttagatcaaatgtatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 11935615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 19659407 - 19659472
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  19659407 aggtcaaatgcatctaaaggtcctttaagttttttatttttcccaaagtcgtcctttaagtttcaa 19659472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 33760797 - 33760729
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  33760797 tataggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagtcgtcctttaattttcaa 33760729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 35342414 - 35342350
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  35342414 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctttaagtttcaa 35342350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 4016198 - 4016132
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4016198 taggtcaaatgcatctaaaggtcctttaagttattcgtttttcccaaagtcgtcctttaagtttcaa 4016132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 6333011 - 6332949
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  6333011 aggtcaaatgcatctaaatgtcctttaagtttttcatttttttcaaagtcgtcctttaagttt 6332949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 20079581 - 20079516
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  20079581 aggtcaaatacatctaaaggtcctttaagtttttcgtttttcctaaagtggtcctttaagtttcaa 20079516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 31710099 - 31710164
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  31710099 aggtcaaatacatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 31710164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 41282159 - 41282224
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  41282159 aggtcaaatgcatctaaacgtcctttaagttttttgtttttcccaaagtcgtcctttaagtttcaa 41282224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 35155069 - 35155133
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  35155069 ggtcaaatacatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 35155133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 27116420 - 27116353
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||  ||||||||||||| ||||||||||||||||    
T  27116420 ataggtcaaatgcatctaaaagtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaa 27116353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 6600461 - 6600395
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  6600461 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 6600395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 20408769 - 20408703
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||    
T  20408769 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaaatggtcctttaagtttcaa 20408703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 6251810 - 6251875
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||| ||| |||||||||||||||||||||||| ||||||||| ||||||||||||    
T  6251810 aggtcaaatgcatccaaaggtcctttaagtttttcatttttccgaaagtcgtcatttaagtttcaa 6251875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 14717418 - 14717487
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaag-tttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  14717418 tataggtcaaatgcatctaaaggtcctttaagttttttcgtttttcccaaagtggtcctttaagtttcaa 14717487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 19661955 - 19661890
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  19661955 aggtcaaatgcatctaaaggtcgtttaagtttttcgtttttcccaaagttgtcctttaagtttcaa 19661890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 26593604 - 26593539
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  26593604 aggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgccctttaagtttcaa 26593539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 11000635 - 11000699
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||| || |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  11000635 ggtcaaatgcatcttaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 11000699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 285 - 345
Target Start/End: Original strand, 11935292 - 11935352
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaa 345  Q
    ||||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  11935292 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctttaa 11935352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 30863100 - 30863164
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  30863100 ggtcaaatgcatctaaaggtcttttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 30863164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 43166173 - 43166240
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||  ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||    
T  43166173 tataggtcaaatgtatctaaaggtc-tttaagtttttcatttttcccaaagtcgtcttttaagtttcaa 43166240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 43166583 - 43166519
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  43166583 ggtcaaatgtatctaaaggtcttttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 43166519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 3351910 - 3351973
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  3351910 gtcaaatgcatctaaaggtcctttaagtttttcatttttctcaaagtggtcatttaagtttcaa 3351973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 14717842 - 14717776
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||||||||||||||||||||||  |||||| |||||| |||||||||    
T  14717842 taggtcaaatgcatctaaaagtcctttaagtttttcatttttttcaaagtggtccttcaagtttcaa 14717776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 26035271 - 26035337
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||||| ||||||    
T  26035271 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaaatttcaa 26035337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 30298074 - 30298008
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||| |||||||||||| ||||| ||||||| ||||||||||||||||    
T  30298074 taggtcaaatgcatctaaaagtcatttaagtttttcgttttttccaaagtggtcctttaagtttcaa 30298008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 793881 - 793824
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcct 341  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||  |||||||||||    
T  793881 tataggtcaaatacatctaaaagtcctttaaatttttcatttttcttaaagtcgtcct 793824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 6600042 - 6600107
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| || ||||||||||||| ||||||| ||||| ||||||||||||||||    
T  6600042 aggtcaaatgcatctaaacgttctttaagtttttcgtttttccgaaagtggtcctttaagtttcaa 6600107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 11001052 - 11000987
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||| ||| ||||| ||||||    
T  11001052 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcatttaattttcaa 11000987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 20408350 - 20408415
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||||||||| | ||||||||||||| ||||||||||||||||    
T  20408350 ggtcaaatgcatctaaaggtcctttaagttttttcgtttttcccaaagtggtcctttaagtttcaa 20408415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 28078729 - 28078664
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||| ||||||||||||    
T  28078729 aggtcaaatgcatctaaaagtcctttaagtttttcgttttttccaaagtggtcttttaagtttcaa 28078664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 33003276 - 33003211
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||| ||||| ||||||||| ||||||    
T  33003276 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcctaaagtggtcctttaaatttcaa 33003211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 39125942 - 39126007
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||  ||||||||||||||| |||||||||||||  |||||||||||||||    
T  39125942 aggtcaaatgcatctaaagatcctttaagtttttcgtttttcccaaagtgttcctttaagtttcaa 39126007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 19398515 - 19398452
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||||||| |||||||||||  ||||||||||| ||||||||||||||||||    
T  19398515 ggtcaaattcatctaaatgtc-tttaagtttttagtttttcccaaaatcgtcctttaagtttcaa 19398452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 39824789 - 39824726
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||||||| |||||||||||| ||||||||||||| ||| ||||||||||||    
T  39824789 ggtcaaatgcatctaaatgtc-tttaagtttttcgtttttcccaaagtggtcatttaagtttcaa 39824726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 1827783 - 1827846
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||||| ||| ||||  ||||||||||||||||||||||||||| ||||| |||||||||    
T  1827783 taggtcaaatgcatttaaagatcctttaagtttttcatttttcccaaaatcgtcatttaagttt 1827846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 3352327 - 3352260
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| ||||||||| |||||| ||||||| ||| | ||||||||||||||||    
T  3352327 ataggtcaaatgcatctaaaggtcctttaaatttttcgtttttcctaaattggtcctttaagtttcaa 3352260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 17002482 - 17002415
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||| |||||  |||||| ||| ||||||||||||    
T  17002482 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtggtcatttaagtttcaa 17002415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 20516985 - 20517040
Alignment:
Q  297 catctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||| |||||||||||| |||||| |||||||||||||||||||||||    
T  20516985 catctaaaggtcttttaagtttttcgtttttctcaaagtcgtcctttaagtttcaa 20517040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 42993333 - 42993400
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||| |||| |||||| ||||| ||||||| ||||||||||||||||    
T  42993333 ataggtcaaatgcatctaaaggtcccttaaatttttcgttttttccaaagtggtcctttaagtttcaa 42993400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 8216135 - 8216073
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||| ||| |||| ||||||||| ||||||||||||  ||||||||||||||||||||    
T  8216135 aggtcaaatgcatttaaaggtcctttaaatttttcatttttttcaaagtcgtcctttaagttt 8216073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 28078310 - 28078376
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||| |||||||||||  ||||| ||||||| ||||||||||||||||    
T  28078310 taggtcaaatgcatctaaaggtcttttaagttttttgttttttccaaagtggtcctttaagtttcaa 28078376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 31710514 - 31710452
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||||||||  ||||||||||||||  ||||||||||||| ||||||||||||||||    
T  31710514 tcaaatgcatctaaagatcctttaagtttttagtttttcccaaagtggtcctttaagtttcaa 31710452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 38964385 - 38964343
Alignment:
Q  310 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  38964385 tttaagtttttcattttttccaaagtcgtcctttaagtttcaa 38964343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 9919840 - 9919775
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||| ||| |||||||||||||||| ||||||||||  | ||||||||||||||||    
T  9919840 aggtcaaatgcatccaaaggtcctttaagtttttcgtttttcccaagttggtcctttaagtttcaa 9919775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 8689386 - 8689454
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||| |||| || ||||||||||||| |||||  |||||| ||||||||||||||||    
T  8689386 tataggtcaaatgcatttaaaggttctttaagtttttcgtttttttcaaagtggtcctttaagtttcaa 8689454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 8689809 - 8689742
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||||| |||||||| || ||||||||||||| ||||||||||||| || |||||||||||||    
T  8689809 tatagatcaaatgcatctaaaggttctttaagtttttcgtttttcccaaagtggt-ctttaagtttcaa 8689742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 16751959 - 16752027
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||||||||| |||||| ||||| | ||||| ||| ||||||||||||    
T  16751959 tataggtcaaatgcatctaaaggtcctttaaatttttcgttttttctaaagtggtcatttaagtttcaa 16752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 42263145 - 42263086
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| |||||||||||||||| ||||||||||||| || |||||||||||||    
T  42263145 aaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggt-ctttaagtttcaa 42263086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 1052770 - 1052703
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||  || |||| ||||| ||||||||||||||||| |||||| ||| ||||||||||||    
T  1052770 ataggtcaaatgtatttaaaggtcctctaagtttttcatttttctcaaagtggtcatttaagtttcaa 1052703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 4015778 - 4015845
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttt-tcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||  ||||||||||||| ||||||||  |||||||||| ||||||||||||    
T  4015778 taggtcaaatgcatctaaagatcctttaagttttttcatttttttcaaagtcgtcttttaagtttcaa 4015845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 8694681 - 8694748
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| ||| ||||  || |||||||||| ||||||||||||||| ||| ||||||||||||    
T  8694681 ataggtcaaatgcatttaaagttcttttaagttttgcatttttcccaaagtggtcatttaagtttcaa 8694748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 14952169 - 14952235
Alignment:
Q  288 ggtcaaatacatctaaat--gtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||   ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  14952169 ggtcaaatgcatctaaagaggtcctttaagtttttcatttttttcaaagtggtcctttaagtttcaa 14952235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 27457490 - 27457423
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| ||| |||| |||| ||||||||||| ||||| | ||||| ||||||||||||||||    
T  27457490 ataggtcaaatgcatttaaaggtccattaagtttttcgttttttctaaagtggtcctttaagtttcaa 27457423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 30208718 - 30208656
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||||||| ||||||    
T  30208718 gtcaaatgcatctaaaggtc-tttaagtttttcgtttttcccaaagttgtcctttaaatttcaa 30208656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 33760390 - 33760441
Alignment:
Q  301 taaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  33760390 taaaggtcctttaagtttttcatttttcctaaaatcgtcatttaagtttcaa 33760441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 567813 - 567767
Alignment:
Q  306 gtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  567813 gtcctttaagtttttcgttttttctaaagtcgtcctttaagtttcaa 567767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 9919187 - 9919253
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||| ||| ||||||||| |||||| ||||||||||  | ||||||||||||||||    
T  9919187 taggtcaaatgcatccaaaggtcctttaaatttttcgtttttcccaagttggtcctttaagtttcaa 9919253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 19398110 - 19398164
Alignment:
Q  298 atctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||| |||||||||||||||||| |||||||  |||||||||||||||    
T  19398110 atctaaaggtcttttaagtttttcattttttccaaagtgatcctttaagtttcaa 19398164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 335
Target Start/End: Complemental strand, 35861531 - 35861481
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagt 335  Q
    ||||||||||| |||||||| |||||||||||||||| ||||| |||||||    
T  35861531 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagt 35861481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 27115997 - 27116070
Alignment:
Q  279 tattctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| ||||||||||||  ||||||| || ||||||||||||| ||||| | ||||| ||| ||||||||||||    
T  27115997 tattatataggtcaaatgtatctaaaggttctttaagtttttcgttttttctaaagtggtcttttaagtttcaa 27116070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 1052382 - 1052418
Alignment:
Q  316 tttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||||||||||||||||||||||||||||||    
T  1052382 tttttcgtttttcccaaagtcgtcctttaagtttcaa 1052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 16752330 - 16752266
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| | |||||||||||||| |||||  |||||| || |||||||||||||    
T  16752330 ggtcaaatgcatctaaaggccctttaagtttttcgtttttttcaaagtggttctttaagtttcaa 16752266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 42993752 - 42993688
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||||||||||||| |||||| ||||    ||||| ||||||||||||||||    
T  42993752 ggtcaaatgcatctaaatgtcctttaaatttttcgttttatttaaagtggtcctttaagtttcaa 42993688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 567657 - 567711
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaa 345  Q
    |||||| |||||||| ||| |||||||||||||||||| ||||||| |||||||||    
T  567657 tcaaatgcatctaaaggtc-tttaagtttttcattttttccaaagtggtcctttaa 567711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 352
Target Start/End: Original strand, 6739887 - 6739926
Alignment:
Q  313 aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||||||| ||||||||||||||||    
T  6739887 aagtttttcgtttttcccaaagtggtcctttaagtttcaa 6739926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 16096285 - 16096218
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||  ||||||| ||| ||||| |||||  |||||||||||||| || ||||||||||||    
T  16096285 ataggtcaaatggatctaaaggtcttttaaattttttgtttttcccaaagtcctcttttaagtttcaa 16096218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 40075183 - 40075120
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||||||||  | |||||| |||||||||||||  ||||| ||||||||||||||||    
T  40075183 gtcaaatgcatctaaagattctttaaatttttcatttttcttaaagtggtcctttaagtttcaa 40075120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 445170 - 445104
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||  ||||||||||||||| |||||   ||||| ||||||||| ||||||    
T  445170 taggtcaaatgcatctaaagttcctttaagtttttcgttttttttaaagtggtcctttaaatttcaa 445104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 6740279 - 6740214
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||| |||| ||| ||||||||||| | ||||||||||||| ||||||||||||||||    
T  6740279 aggtcaaatgcatttaaaggtc-tttaagttttttcgtttttcccaaagtggtcctttaagtttcaa 6740214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 11692460 - 11692406
Alignment:
Q  298 atctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| || ||||||||||||| |||||||||| ||  |||||||||||||||    
T  11692460 atctaaaggttctttaagtttttcgtttttcccaacgtgatcctttaagtttcaa 11692406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 26593209 - 26593251
Alignment:
Q  310 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||| |||| ||||| |||||||||||||    
T  26593209 tttaagtttttcattttttccaacgtcgttctttaagtttcaa 26593251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 27457102 - 27457168
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| || ||||||||||||| |||||   ||||| ||||||||||||||||    
T  27457102 taggtcaaatgcatttaaaggttctttaagtttttcgttttttttaaagtggtcctttaagtttcaa 27457168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 39824373 - 39824438
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||  ||||||| |||||||||||||| | ||||| | ||| | ||||||||||||||||    
T  39824373 aggtcaaatgtatctaaaggtcctttaagttttgcgttttttctaaaatggtcctttaagtttcaa 39824438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 35341997 - 35342045
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagt 335  Q
    ||||||||| ||| ||||||| ||||||||||||| |||||| ||||||    
T  35341997 aggtcaaatgcatttaaatgttctttaagtttttcgtttttctcaaagt 35342045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 39401895 - 39401963
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttca-tttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||  || |||| ||||||||||||||||| |||||  |||||| ||| ||||||||||||    
T  39401895 ataggtcaaatggatttaaaggtcctttaagtttttcattttttttcaaagtagtcatttaagtttcaa 39401963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 28264880 - 28264813
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28264880 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 28264813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 31591311 - 31591245
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31591311 taggtcaaatgcatctaaaagtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 31591245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 49118847 - 49118781
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49118847 taggtcaaatgtatctaaatgtcgtttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 49118781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 22298753 - 22298688
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  22298753 aggtcaaatgcatctaaatgtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 22298688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 23135304 - 23135239
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  23135304 tataggtcaaatgcatctaaatggcctttaagtttttcattttttccaaagtcgtcctttaagttt 23135239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 284 - 349
Target Start/End: Complemental strand, 36444742 - 36444677
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  36444742 tataggtcaaatgcatctaaatgtcctttaagtttttcgtttttcccaaagtggtcctttaagttt 36444677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 31208566 - 31208630
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  31208566 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 31208630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 42274040 - 42273972
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  42274040 tataggtcaaatgcatcaaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaa 42273972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 50276045 - 50276109
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  50276045 ggtcaaatgcatctaaatgtcctttaagtttttcatttttcccaaagtggtcctgtaagtttcaa 50276109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 32118529 - 32118596
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  32118529 ataggtcaaatacatctaatggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 32118596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 301 - 352
Target Start/End: Complemental strand, 44490540 - 44490489
Alignment:
Q  301 taaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44490540 taaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 44490489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 12196294 - 12196360
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  12196294 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 12196360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 12196705 - 12196639
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12196705 taggtgaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagcttcaa 12196639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 26017268 - 26017334
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  26017268 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctttaagtttcaa 26017334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 28264489 - 28264554
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  28264489 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgttctttaagtttcaa 28264554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 33173926 - 33173991
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||||||||| ||||||||||||    
T  33173926 aggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcatttaagtttcaa 33173991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 9339449 - 9339385
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  9339449 ggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaaatcgtcctttaagtttcaa 9339385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 25734546 - 25734482
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  25734546 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcatttaagtttcaa 25734482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 17993339 - 17993276
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  17993339 gtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtcgtcctttaagtttcaa 17993276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 48551668 - 48551735
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| ||||||||||||||||||||||||| |||||  |||||| ||||||||||||||||    
T  48551668 ataggtcaaatgcatctaaatgtcctttaagtttttcgtttttttcaaagtggtcctttaagtttcaa 48551735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 49118459 - 49118522
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  49118459 gtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtcgtcctttaagtttcaa 49118522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 50276460 - 50276397
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||||| |||||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  50276460 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctttaagttt 50276397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 55517094 - 55517156
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  55517094 gtcaaatgcatctaaaggtc-tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 55517156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 17847449 - 17847383
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||    
T  17847449 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaggtttcaa 17847383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 23134911 - 23134977
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| ||||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  23134911 taggccaaatgcatctaaaggtcctgtaagtttttcatttttcccaaagtcatcctttaagtttcaa 23134977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 25730476 - 25730410
Alignment:
Q  287 aggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||  ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  25730476 aggtcaaatgtatctaaatgtccttttaagtttttcattttttccaaagtcgtcctttaagtttcaa 25730410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 48552050 - 48551976
Alignment:
Q  278 atattctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||||||||||| |||||||| || ||||||||||||| ||||| ||||||| ||||||||||||||||    
T  48552050 atattttataggtcaaatgcatctaaaggttctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 48551976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 17992949 - 17993014
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||    
T  17992949 tataggttaaatatatctaaaggtcttttaagtttttcatttttcccaaagtcgtccttttagttt 17993014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 26017658 - 26017593
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  26017658 aggtcaaatgcatctaaaggtcctttgagtttttcattttttccaaagttgtcctttaagtttcaa 26017593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 33807687 - 33807751
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||    
T  33807687 aggtcaaatgcatctaaaggtcatttaagtttttcatttttcccaaagtcgt-ctttaagtttcaa 33807751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 44490027 - 44490092
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| || ||||||||||||| |||||| |||||||||||||||||||||||    
T  44490027 aggtcaaatgcatctaaaggttctttaagtttttcgtttttctcaaagtcgtcctttaagtttcaa 44490092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 28812194 - 28812258
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| |||||||||||||  |||||||||||||||    
T  28812194 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtgatcctttaagtttcaa 28812258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 31973825 - 31973761
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||||||||||||| |||||| |||||||||||||  |||||||||||||||    
T  31973825 ggtcaaatgcatctaaatgtcctttaaatttttcgtttttcccaaagtgatcctttaagtttcaa 31973761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 33693657 - 33693593
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||||||||||||||||||| |||||  |||||| ||||||||||||||||    
T  33693657 ggtcaaatgcatctaaatgtcctttaagtttttcgtttttttcaaagtggtcctttaagtttcaa 33693593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 48707636 - 48707704
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||| |||||||  ||||||||||||||||||||||  |||||||||||||||||||||||    
T  48707636 tataggttaaatgcatctaatggtcctttaagtttttcatttttttcaaagtcgtcctttaagtttcaa 48707704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 5227627 - 5227560
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||    
T  5227627 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggttctttaagtttcaa 5227560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 14564615 - 14564678
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  14564615 gtcaaatgcatttaaatgtcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 14564678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 19496471 - 19496404
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttc-atttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  19496471 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttttccaaagtcgtcctttaagtttcaa 19496404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 30141403 - 30141336
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||| ||||| | ||||| ||||||||||||||||    
T  30141403 ataggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaagtggtcctttaagtttcaa 30141336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 48149318 - 48149381
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||| |||||||||||||||||||||| | ||||| ||| ||||||||||||    
T  48149318 gtcaaatacatctaaaggtcctttaagtttttcattttttctaaagtagtcatttaagtttcaa 48149381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 19169091 - 19169025
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||||  || ||||||||||||    
T  19169091 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtgatcatttaagtttcaa 19169025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 22298335 - 22298401
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| ||||| |||||||  |||||||||||||||    
T  22298335 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtgttcctttaagtttcaa 22298401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 48708025 - 48707963
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||||||||  ||||||||||||||| |||||| |||||||||||||||||||||||    
T  48708025 tcaaatgcatctaaagatcctttaagtttttcgtttttctcaaagtcgtcctttaagtttcaa 48707963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 9339030 - 9339094
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| ||||||||||||||||||  |||||||||||||||||||||||    
T  9339030 aggtcaaatgcatctaaaggtc-tttaagtttttcatttttttcaaagtcgtcctttaagtttcaa 9339094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 17847003 - 17847067
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||||||||||  |||||||||||| ||||||||||||||||    
T  17847003 aggtcaaatgcatctaaaggtcctttaagtttttc-gttttcccaaagtggtcctttaagtttcaa 17847067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 286 - 351
Target Start/End: Original strand, 35790787 - 35790852
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttca 351  Q
    |||||||||| ||| |||||||||||||| |||||| |||||| |||||| |||||||||||||||    
T  35790787 taggtcaaatgcatttaaatgtcctttaaatttttcgtttttctcaaagtggtcctttaagtttca 35790852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 24622995 - 24623059
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||  |||||| |||||| ||||||||||||||||    
T  24622995 ggtcaaatgcatctaaaggtcctttaagttttttgtttttctcaaagtggtcctttaagtttcaa 24623059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 28159856 - 28159924
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||||| |||||||| |||||||||||||||| ||||||  ||||| ||||||||||||||||    
T  28159856 tatagatcaaatgcatctaaaggtcctttaagtttttcgtttttcttaaagtggtcctttaagtttcaa 28159924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 4544890 - 4544956
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| ||| |||||||||||||||||| | ||||| ||||||||||||||||    
T  4544890 ataggtcaaatgcatctaaaggtc-tttaagtttttcattttttctaaagtagtcctttaagtttcaa 4544956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 286 - 349
Target Start/End: Complemental strand, 28160280 - 28160217
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||||| |||||||| |||||||||||||||| |||||||||||   |||||||||||||    
T  28160280 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaacaagtcctttaagttt 28160217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 2055101 - 2055167
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| |||||  |||||| ||| ||||||||||||    
T  2055101 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtggtcatttaagtttcaa 2055167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 31208979 - 31208914
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||  |||||||||||||||||||||||| ||| ||||| ||||||||||||    
T  31208979 taggtcaaatgcatctaag-gtcctttaagtttttcatttttcctaaattcgtcatttaagtttcaa 31208914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 31590917 - 31590959
Alignment:
Q  310 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  31590917 tttaagtttttcattttttccaaagtcgtcctttaagtttcaa 31590959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 288 - 349
Target Start/End: Original strand, 39995073 - 39995135
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagttt 349  Q
    |||||||| |||||||| ||||||||||||||| | ||||||||||||| |||||||||||||    
T  39995073 ggtcaaatgcatctaaaggtcctttaagttttttcgtttttcccaaagtggtcctttaagttt 39995135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 42549917 - 42549851
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||| || ||||||||||||| |||||  |||||| ||| ||||||||||||    
T  42549917 taggtcaaatacatctaaaggttctttaagtttttcgtttttttcaaagtggtcatttaagtttcaa 42549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 48149735 - 48149669
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||| |||||||| |||||||||||||||| ||||| ||||||| || |||||||||||||    
T  48149735 taggtgaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggttctttaagtttcaa 48149669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 56555468 - 56555402
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagt-ttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||||| ||||| ||||||||||| ||||| ||||||||||||    
T  56555468 aggtcaaatgcatctaaaggtcctttaagttttttcgtttttcccaaaatcgtcatttaagtttcaa 56555402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 9800474 - 9800409
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||| |||| || |||||||||||| |||||||  ||||| ||||||||||||||||    
T  9800474 aggtcaaatacatttaaaggttctttaagttttttatttttcttaaagtggtcctttaagtttcaa 9800409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 20534433 - 20534364
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||| ||||||||||| | ||||| ||||||| ||||||||||||||||    
T  20534433 tataggtcaaatgcatctaaaggtcatttaagttttttcgttttttccaaagtggtcctttaagtttcaa 20534364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 23553298 - 23553237
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||| |||||||| |||||||||||||||| ||||| | ||||| |||||||||||||    
T  23553298 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaagtggtcctttaagttt 23553237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 35930270 - 35930209
Alignment:
Q  291 caaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| ||||||||  |||||||||||||||||||||  |||||| ||||||||||||||||    
T  35930270 caaatgcatctaaagatcctttaagtttttcatttttttcaaagtggtcctttaagtttcaa 35930209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 19496009 - 19496073
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||  || ||||||||||||||||||||||||||  |||||||| ||||||    
T  19496009 ggtcaaatgcatctaaagttcttttaagtttttcatttttcccaaagtgatcctttaaatttcaa 19496073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 24458538 - 24458602
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||| | ||| ||||||  ||||||||    
T  24458538 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcctagagtggtccttagagtttcaa 24458602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 33174314 - 33174250
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| || |||| |||||||||||||||| |||||  |||||||||||||||| ||||||    
T  33174314 ggtcaaatatatttaaaggtcctttaagtttttcgtttttttcaaagtcgtcctttaaatttcaa 33174250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 40988863 - 40988799
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| |||||||||||||||  ||||||| ||||| ||||||||||||||||    
T  40988863 ggtcaaatgtatctaaaagtcctttaagttttttgtttttcctaaagtggtcctttaagtttcaa 40988799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 10588813 - 10588750
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||||||||| |||||| |||||  |||||| ||||||||||||||||    
T  10588813 gtcaaatgcatctaaaggtcctttaaatttttcgtttttgtcaaagtggtcctttaagtttcaa 10588750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 11795476 - 11795413
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||  ||||| |||||||||| ||||||||||||| ||||||||||| ||||    
T  11795476 gtcaaatgcatctaagggtcctataagtttttcgtttttcccaaagtggtcctttaagtatcaa 11795413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 19168724 - 19168783
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||| | |||||| ||||||||||||||||||||||  |||||| |||||||||||||    
T  19168724 tcaaatgcttctaaaggtcctttaagtttttcatttttttcaaagtggtcctttaagttt 19168783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 37381662 - 37381728
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||  ||||||| |||||||||||||||| |||||||||||||  || ||||| ||||||    
T  37381662 taggtcaaatttatctaaaggtcctttaagtttttcgtttttcccaaagtgatcttttaattttcaa 37381728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 50542667 - 50542613
Alignment:
Q  298 atctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||||||||||| ||||| ||||||| ||||||||| ||||||    
T  50542667 atctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaaatttcaa 50542613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 8433736 - 8433773
Alignment:
Q  315 gtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||| |||||||||||||||||||||||    
T  8433736 gtttttcatttttctcaaagtcgtcctttaagtttcaa 8433773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 11795060 - 11795125
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaag-tttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||| |||||| |||||  |||||| ||||||||||||||||    
T  11795060 ggtcaaatgcatctaaaggtcctttaagttttttcgtttttttcaaagtggtcctttaagtttcaa 11795125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 28812610 - 28812545
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||| ||| |||||||||||| |||||  |||||| ||| ||||||||||||    
T  28812610 aggtcaaatatatctaaaggtcttttaagtttttcgtttttttcaaagtggtcatttaagtttcaa 28812545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 30467306 - 30467237
Alignment:
Q  284 tataggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||||| || ||||||| ||||||||  |||||||||||||  |||||||||||||||    
T  30467306 tataggtcaaatgcatcttaaggtccttttaagttttttgtttttcccaaagtgatcctttaagtttcaa 30467237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 33452319 - 33452380
Alignment:
Q  291 caaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||||||| |||||| ||||||||| |||||| |||||| || |||||||||||||    
T  33452319 caaatgcatctaaaggtccttaaagtttttcgtttttctcaaagtggttctttaagtttcaa 33452380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 286 - 343
Target Start/End: Complemental strand, 33496450 - 33496393
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtccttt 343  Q
    ||||| |||| |||||||| |||| ||||||||||| ||||||||||||| |||||||    
T  33496450 taggttaaatgcatctaaaggtcccttaagtttttcgtttttcccaaagtggtccttt 33496393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 340
Target Start/End: Original strand, 36444588 - 36444641
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcc 340  Q
    ||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||    
T  36444588 aggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcc 36444641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 51371400 - 51371335
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||| | ||||| ||| ||||| ||||||    
T  51371400 aggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaagtggtcatttaaatttcaa 51371335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 8881917 - 8881984
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttca--tttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||| |||| |||||||||||||||||  ||||| | ||||| ||||||||||||||||    
T  8881917 aggtcaaatgcatttaaaggtcctttaagtttttcattttttttctaaagtggtcctttaagtttcaa 8881984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 4545281 - 4545218
Alignment:
Q  288 ggtcaaatacatctaaatg-tcctttaagttttt-catttttcccaaagtcgtcctttaagttt 349  Q
    |||||||| |||||||| | |||||||||||||| | ||||||| |||||||||||||||||||    
T  4545281 ggtcaaatgcatctaaaaggtcctttaagttttttcgtttttcctaaagtcgtcctttaagttt 4545218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 23552877 - 23552944
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||  ||||| |||||||| | ||||||| ||||| ||||||||||||||||    
T  23552877 taggtcaaatgcatctaaagatccttgaagttttttcgtttttcctaaagtggtcctttaagtttcaa 23552944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 349
Target Start/End: Original strand, 41355202 - 41355261
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||| |||||||| ||||||||| |||||||||||||| ||| | ||| |||||||||    
T  41355202 tcaaatgcatctaaaggtcctttaaatttttcatttttcctaaaatggtcatttaagttt 41355261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 33496090 - 33496144
Alignment:
Q  298 atctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||||||||||  |||||| |||| | ||||||||||||||||    
T  33496090 atctaaaggtcctttaagttttttgtttttctcaaaatggtcctttaagtttcaa 33496144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 33808105 - 33808039
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttc-atttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| || |||||||||||||  |||||  |||||||||||||||| ||||||    
T  33808105 aggtcaaatgcatctaaaggttctttaagtttttcgttttttttcaaagtcgtcctttaattttcaa 33808039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 14565031 - 14564966
Alignment:
Q  288 ggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| ||||||| ||||||||||||||||| ||||| || |||||| ||||||    
T  14565031 ggtcaaatgaatctaaaggtccttttaagtttttcatttttcctaaagtggttctttaaatttcaa 14564966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 50542260 - 50542325
Alignment:
Q  288 ggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| ||||||| ||||||||| |||||  |||||| ||||||||||||||||    
T  50542260 ggtcaaatgtatctaaaggtccttttaagtttttcgtttttttcaaagtggtcctttaagtttcaa 50542325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 30466910 - 30466974
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttc-atttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||| ||||||||||||  ||||| | ||||| ||||||||||||||||    
T  30466910 gtcaaatgcatctaaaggtcttttaagtttttcgtttttttctaaagtggtcctttaagtttcaa 30466974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 89)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 50287381 - 50287448
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50287381 ataggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 50287448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 33151961 - 33151895
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33151961 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 33151895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 29677710 - 29677646
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29677710 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 29677646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 1687887 - 1687821
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1687887 taggtcaaatgcatctaaaggtcctttaagtttttcatttttctcaaagtcgtcctttaagtttcaa 1687821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 1016890 - 1016955
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  1016890 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 1016955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 27071062 - 27070998
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  27071062 ggtcaaagacatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 27070998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 1017277 - 1017214
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  1017277 gtcaaatgcatctaaaggtcttttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 1017214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 36315296 - 36315231
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  36315296 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 36315231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 55164021 - 55164086
Alignment:
Q  288 ggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  55164021 ggtcaaatgcatctaaatgtccttttaagtttttcatttttcccaaagccgtcctttaagtttcaa 55164086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 1687498 - 1687562
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  1687498 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcatttaagtttcaa 1687562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 21656756 - 21656688
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  21656756 tataggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 21656688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 19664356 - 19664423
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||| |||||| |||||| ||||||||||||||||    
T  19664356 ataggtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 19664423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 44798500 - 44798437
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||||    
T  44798500 gtcaaatacatctaaaggtcctttaagttttttatttttcccaaagtggtgctttaagtttcaa 44798437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 20760396 - 20760330
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  20760396 taggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaaatcgtcctttaagtttcaa 20760330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 20813766 - 20813700
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  20813766 taggtcaaatgcatctaaaggtcctttaaatttttcgtttttcccaaagtggtcctttaagtttcaa 20813700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 48651064 - 48651130
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||||  || ||||||||||||    
T  48651064 taggtcaaatgcatctaaatgtcctttaagtttttcgtttttcccaaagtgatcatttaagtttcaa 48651130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 8097256 - 8097191
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||||| ||| |||||||||||||    
T  8097256 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagccgtactttaagtttcaa 8097191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 21564731 - 21564666
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||  ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  21564731 aggtcaaatgcatctaaagatcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 21564666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 35346377 - 35346442
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  |||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  35346377 aggtcaaacgcatctaaaggtcctttaagtttttcatttttcctaaagtggtcctttaagtttcaa 35346442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 35608425 - 35608360
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||  |||||||||||||||| |||||| |||||||||||||||||||||||    
T  35608425 aggtcaaatgcatctaacggtcctttaagtttttcgtttttctcaaagtcgtcctttaagtttcaa 35608360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 55164439 - 55164374
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||| ||||| ||||||||||||    
T  55164439 aggtcaaatacatctaaaggtcctttaagtttttcgtttttctcaaaatcgtcttttaagtttcaa 55164374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 28699532 - 28699596
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  28699532 ggtcaaatatatctaaaggtcatttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 28699596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 37248190 - 37248126
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||||| |||||||||||| ||||| | ||||| ||||||||||||||||    
T  37248190 ggtcaaatacatctaaatgtcttttaagtttttcgttttttctaaagtggtcctttaagtttcaa 37248126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 20759991 - 20760042
Alignment:
Q  301 taaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  20759991 taaaggtccttgaagtttttcatttttcccaaagtcgtcctttaagtttcaa 20760042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 41251123 - 41251056
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| ||||||||||||||| |||| | ||||||| ||||||||||||||||    
T  41251123 ataggtcaaatgcatctaaaagtcctttaagttttttatttcttccaaagtggtcctttaagtttcaa 41251056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 53196246 - 53196183
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| |||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  53196246 gtcaaatgcatctaaaggtcctttaagtttttcgtttttccgaaagtggtcctttaagtttcaa 53196183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 19268337 - 19268403
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||||  ||||||||||||||| |||||  |||||| ||||||||||||||||    
T  19268337 taggtcaaatacatctaaaaatcctttaagtttttcgtttttaacaaagtggtcctttaagtttcaa 19268403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 21564341 - 21564407
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| |||||||| |||| || |||||||||||||    
T  21564341 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccgaagtggttctttaagtttcaa 21564407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 31122898 - 31122832
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||||||||| |||||| |||||||||||||  |||||||||||||||    
T  31122898 taggtcaaatgcatctaaaggtcctttaactttttcgtttttcccaaagtgatcctttaagtttcaa 31122832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 47329499 - 47329433
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| || ||||||||||||| ||||| ||||||| ||||||||||||||||    
T  47329499 taggtcaaatgcatctaaaggttctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 47329433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 50364812 - 50364878
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||  ||||||| ||| |||||||||||||||||||||||||| ||| ||||||||||||    
T  50364812 taggtcaaatgaatctaaaggtcttttaagtttttcatttttcccaaagtggtcatttaagtttcaa 50364878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 1448641 - 1448706
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||||| ||||||  |||||||||||||||    
T  1448641 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtgatcctttaagtttcaa 1448706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 288 - 345
Target Start/End: Complemental strand, 19229284 - 19229227
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaa 345  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  19229284 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaa 19229227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 22851813 - 22851878
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||| ||||||||||| |||||  |||||||||||||||||||||||    
T  22851813 aggtcaaatgcatctaaaggtccgttaagtttttcgtttttttcaaagtcgtcctttaagtttcaa 22851878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 22852230 - 22852166
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||    
T  22852230 aggtcaaatgcatctaaaggtc-tttaagtttttcatttttcttaaagtcgtcctttaagtttcaa 22852166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 291 - 352
Target Start/End: Original strand, 27070649 - 27070710
Alignment:
Q  291 caaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| ||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  27070649 caaatgcatataaaggtcctttaaatttttcattttttccaaagtcgtcctttaagtttcaa 27070710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 288 - 349
Target Start/End: Original strand, 34019337 - 34019398
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||||||||||| |||||||||||||||| |||||  |||||| |||||||||||||    
T  34019337 ggtcaaatacatctaaaggtcctttaagtttttcgtttttttcaaagtggtcctttaagttt 34019398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 44152517 - 44152582
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||||  ||||| |||||||||||||||||    
T  44152517 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagccgtcctttaagtttcaa 44152582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 19228887 - 19228951
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||||||||||||||||||  |||||| |||| | ||||||||||||||||    
T  19228887 ggtcaaatgcatctaaatgtcctttaagttttttgtttttctcaaaatggtcctttaagtttcaa 19228951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 19268760 - 19268697
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  19268760 ggtcaaatgcatctaaaggtc-tttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 19268697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 32650723 - 32650791
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||  ||||||||||| |||||||||||| ||||| | ||||| ||||||||||||||||    
T  32650723 tataggtcaaatggatctaaatgtcatttaagtttttcgttttttctaaagtggtcctttaagtttcaa 32650791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 51475541 - 51475478
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  51475541 ggtcaaatgcatctaaaggtc-tttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 51475478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 12748597 - 12748530
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| ||| |||| |||||||||||||| | ||||||| ||||| ||||||||||||||||    
T  12748597 ataggtcaaatgcatttaaaggtcctttaagttttacgtttttcctaaagtggtcctttaagtttcaa 12748530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 10618776 - 10618710
Alignment:
Q  287 aggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||| ||||||||| ||||||| ||||| ||||||||||||||||    
T  10618776 aggtcaaatgcatctaaaggtccttttaagtttttcgtttttcctaaagtggtcctttaagtttcaa 10618710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 47473075 - 47473141
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||  | ||||||||||||| |||||||| |||| ||||||||||||||||    
T  47473075 taggtcaaatgcatctaaagattctttaagtttttcgtttttccctaagtggtcctttaagtttcaa 47473141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 49799387 - 49799325
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||| |||||||| |||||| ||||||||| ||||||||||||| ||||||| |||||    
T  49799387 aggtcaaatgcatctaaaggtccttaaagtttttcgtttttcccaaagtggtccttttagttt 49799325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 50287778 - 50287736
Alignment:
Q  310 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  50287778 tttaagtttttcatttttctcaaagtcgtcctttaagtttcaa 50287736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 53926305 - 53926239
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||| |||| |||||| ||||| |||||||||||| |||||||||||    
T  53926305 taggtcaaatgcatctaaaggtccattaaatttttcgttttttccaaagtcgtccattaagtttcaa 53926239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 21890405 - 21890340
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||||  |||| | ||||||||||||||||    
T  21890405 aggtcaaatgcatctaaaagtcctttaagtttttcgtttttttcaaaatggtcctttaagtttcaa 21890340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 349
Target Start/End: Original strand, 28193248 - 28193309
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||  ||||||| ||||||||||||||||||||||| |||| | |||||||||||||    
T  28193248 ggtcaaatgtatctaaaggtcctttaagtttttcatttttctcaaaatagtcctttaagttt 28193309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 32651144 - 32651079
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||| |||||||| |||||||||||||||| |||||  |||||| ||||||||||||||||    
T  32651144 aggtgaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtggtcctttaagtttcaa 32651079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 38446294 - 38446359
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||| |||||||  | |||||||||||||    
T  38446294 aggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtgattctttaagtttcaa 38446359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 40922072 - 40922136
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||  |||||||||||||||||||||||| ||||| ||| ||||||||||||    
T  40922072 aggtcaaatgcatctaag-gtcctttaagtttttcatttttcctaaagtggtcttttaagtttcaa 40922136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 44152908 - 44152843
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||||  || |||||| ||||||    
T  44152908 aggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagctgttctttaaatttcaa 44152843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 49799017 - 49799082
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||  |||||| |||| | ||||||||||||||||    
T  49799017 aggtcaaatgcatctaaaggtcctttaagttttttgtttttctcaaaatggtcctttaagtttcaa 49799082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 51562397 - 51562332
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| || ||||||||||||| ||||||| ||||| ||||||| ||||||||    
T  51562397 aggtcaaatgcatctaaaagttctttaagtttttcgtttttcctaaagtggtcctttgagtttcaa 51562332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 53925885 - 53925950
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||  ||||||| ||| |||||||||||||||||||||||||| ||  ||||||||||||    
T  53925885 aggtcaaatgtatctaaaggtcatttaagtttttcatttttcccaaagtggttatttaagtttcaa 53925950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 3696965 - 3697028
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||  || |||||||||||| ||||||||||||| ||||||||||||||||    
T  3696965 ggtcaaatgcatctaaagatc-tttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 3697028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 12748226 - 12748302
Alignment:
Q  276 ttatattctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| | ||||||||||   |||||| |||||||||||||||| |||||| |||||| | ||||||||||||||    
T  12748226 ttatattatttaggtcaaatgtctctaaaggtcctttaagtttttcgtttttctcaaagtggacctttaagtttcaa 12748302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 21656336 - 21656400
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||  ||||||||||||| ||| ||||||||||||    
T  21656336 ggtcaaatgcatctaaaggtcttttaagttttttgtttttcccaaagtggtcttttaagtttcaa 21656400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 39069574 - 39069638
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||| ||||||||||| | |||||| |||||||||||||||||||||||    
T  39069574 gtcaaatgcatctaaaggtcttttaagttttttcgtttttctcaaagtcgtcctttaagtttcaa 39069638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 41250736 - 41250797
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| |||||||||||||||| |||||| |||||||||  ||||||||||||    
T  41250736 gtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtcgt--tttaagtttcaa 41250797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 53195832 - 53195896
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||  |||| || ||||||||||||| ||||||||||||| ||||||||||||||||    
T  53195832 ggtcaaatgcacttaaaggttctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 53195896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 28699898 - 28699835
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||  ||| |||||||||| | ||||||||||||| ||||||||||||||||    
T  28699898 gtcaaatgcatctaagggtcttttaagttttccgtttttcccaaagtggtcctttaagtttcaa 28699835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 29677351 - 29677418
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcc-caaagtcgtcctttaagtttcaa 352  Q
    ||||||||||  ||||||| |||||||||||||||  ||||| | |||||||||||||||||||||||    
T  29677351 taggtcaaatgtatctaaaggtcctttaagttttttgttttttctcaaagtcgtcctttaagtttcaa 29677418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 38446712 - 38446649
Alignment:
Q  287 aggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||| |||||||||||||||| || |||||| ||||| ||||||| |||||||||||||    
T  38446712 aggtcaaatgcatctaaatgtcctttaaattttttcgttttttccaaagtggtcctttaagttt 38446649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 20813370 - 20813412
Alignment:
Q  310 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  20813370 tttaagtatttcatttttcccaaagtggtcctttaagtttcaa 20813412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 42107008 - 42107070
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||| |||| |||| |||| |||||||||||| |||||| |||||||||||||||||    
T  42107008 tcaaatgcatttaaaggtcccttaaatttttcattttttccaaagccgtcctttaagtttcaa 42107070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 50978080 - 50978014
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| || ||||||||||||  |||||| ||||||  |||||||||||||||    
T  50978080 taggtcaaatgcatctaaaggtactttaagttttttgtttttctcaaagtgatcctttaagtttcaa 50978014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 51081212 - 51081146
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| || ||||||||||||  |||||| ||||||  |||||||||||||||    
T  51081212 taggtcaaatgcatctaaaggtactttaagttttttgtttttctcaaagtgatcctttaagtttcaa 51081146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 52821386 - 52821320
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||| ||| |  |||||||||||||||    
T  52821386 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcctaaaataatcctttaagtttcaa 52821320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 1449026 - 1448965
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||| |||||||| |||||||||||||| | |||||||||||   |||||||||||||    
T  1449026 ggtcaaatgcatctaaaggtcctttaagttttccgtttttcccaaacaagtcctttaagttt 1448965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 20086220 - 20086285
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||| |||||  |||||  |||||| ||||||||||||||||    
T  20086220 aggtcaaatgcatctaaaggtcctttaaattttttgtttttttcaaagtggtcctttaagtttcaa 20086285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 20086634 - 20086573
Alignment:
Q  292 aaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| ||||||||||||||| | ||||||| ||||| ||||||||||||||||    
T  20086634 aaatgcatctaaaggtcctttaagttttttcgtttttccgaaagtggtcctttaagtttcaa 20086573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 35608037 - 35608102
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||| ||||||||  || ||||||||||||||||| || ||||||||| ||||||||||||    
T  35608037 aggttaaatgcatctaaagatcttttaagtttttcattttgcctaaagtcgtcatttaagtttcaa 35608102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 345
Target Start/End: Complemental strand, 37372907 - 37372850
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaa 345  Q
    ||||||||||||||||||||| |||||||||||  ||||||| ||||| ||| |||||    
T  37372907 ggtcaaatacatctaaatgtcatttaagttttttgtttttcctaaagtggtcatttaa 37372850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 45380171 - 45380231
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| ||| |||| || ||||||||||||| |||||||||||||  |||||||||||||||    
T  45380171 aaatgcatttaaaggttctttaagtttttcgtttttcccaaagtgatcctttaagtttcaa 45380231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 47329082 - 47329146
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| || ||||||||||||| |||||   ||||| ||||||||||||||||    
T  47329082 ggtcaaatgcatctaaaggttctttaagtttttcgttttttttaaagtggtcctttaagtttcaa 47329146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 50977712 - 50977775
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||| ||||| | ||||| ||||||||||||||||    
T  50977712 ggtcaaatgcatctaaaggtc-tttaagtttttcgttttttctaaagtggtcctttaagtttcaa 50977775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 51080844 - 51080907
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||| ||||| | ||||| ||||||||||||||||    
T  51080844 ggtcaaatgcatctaaaggtc-tttaagtttttcgttttttctaaagtggtcctttaagtttcaa 51080907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 28775383 - 28775447
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||| |||||||||| | ||||||||||||| ||  ||||||||||||    
T  28775383 taggtcaaatgcatctaaaggtcttttaagttttacgtttttcccaaagtggt--tttaagtttcaa 28775447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 34019674 - 34019610
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||  |||||||||||||||| ||||| | ||||| |||| |||||||||||    
T  34019674 taggtcaaatacatctaag-gtcctttaagtttttcgttttttctaaagtggtcc-ttaagtttcaa 34019610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 39069962 - 39069896
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||| | |||||||| ||||||||||| |||||||||| ||||  ||||||||| ||||||    
T  39069962 taggttaaatgcgtctaaatggcctttaagtttatcatttttcctaaagcggtcctttaaatttcaa 39069896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 20914078 - 20914013
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagt-ttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||||| ||||  |||||  |||||| ||||||||||||||||    
T  20914078 ggtcaaatgcatctaaaggtcctttaagtttttttgtttttttcaaagtggtcctttaagtttcaa 20914013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 20922196 - 20922131
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagt-ttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||||| ||||  |||||  |||||| ||||||||||||||||    
T  20922196 ggtcaaatgcatctaaaggtcctttaagtttttttgtttttttcaaagtggtcctttaagtttcaa 20922131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 10618388 - 10618451
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||||||||||  ||||||||||||  || |||| |||||||    
T  10618388 ggtcaaatgcatctaaaggtcctttaagtttttc-gttttcccaaagtgatcttttatgtttcaa 10618451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 26455815 - 26455752
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||  |||||||||||  ||||||| ||||| ||||||||||||||||    
T  26455815 ggtcaaatgcatctaaaggtt-tttaagtttttggtttttcctaaagtggtcctttaagtttcaa 26455752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 36314878 - 36314942
Alignment:
Q  289 gtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| || |||||| |||||| ||||||||| |||||  |||||| ||||||||||||||||    
T  36314878 gtcaaatgcagctaaatatccttttaagtttttcgtttttttcaaagtagtcctttaagtttcaa 36314942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 52820952 - 52821020
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||| |||  ||| ||||||| |||||||| |||| | |||||| ||||||||||||||||    
T  52820952 tataggttaaatgcattcaaaggtccttttagtttttcgttttcctcaaagtggtcctttaagtttcaa 52821020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 9e-24; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 2707693 - 2707629
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2707693 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 2707629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 35224217 - 35224150
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  35224217 ataggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 35224150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 26393333 - 26393268
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  26393333 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 26393268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 12613153 - 12613080
Alignment:
Q  279 tattctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||||||| |||||||| || |||||||||||||||||||||||||||  |||||||||||||||    
T  12613153 tattatataggtcaaatgcatctaaaggttctttaagtttttcatttttcccaaagtgatcctttaagtttcaa 12613080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 30457547 - 30457483
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  30457547 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 30457483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 287 - 350
Target Start/End: Original strand, 1915250 - 1915312
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttc 350  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1915250 aggtcaaatgcat-taaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttc 1915312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 6503954 - 6503888
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  6503954 taggtcaaatgcatttaaaggtccttcaagtttttcattttttccaaagtcgtcctttaagtttcaa 6503888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 287 - 349
Target Start/End: Original strand, 8178155 - 8178217
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  8178155 aggtcaaatgcatccaaaggtcctttaagtttttcatttttctcaaagtcgtcctttaagttt 8178217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 16193545 - 16193480
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||| | ||||||||||||||||    
T  16193545 aggtcaaatacatctaaaagtcctttaagttttttgtttttcccaaaatggtcctttaagtttcaa 16193480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 29050089 - 29050154
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  29050089 aggtcaaatgcatctaaaagtcctttaagtttttcgtttttcctaaagtggtcctttaagtttcaa 29050154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 1915666 - 1915602
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||||    
T  1915666 ggtcaaatgcatctaaaagtcctttaaatttttcgttttttccaaagtcgtcctttaagtttcaa 1915602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 2643932 - 2643996
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  2643932 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 2643996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 9382753 - 9382689
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||| ||||||||||||||||    
T  9382753 ggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaa 9382689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 17943270 - 17943206
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||| ||||||||||||||||    
T  17943270 ggtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtggtcctttaagtttcaa 17943206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 2598005 - 2598067
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  2598005 taggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggt-ctttaagttt 2598067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 6785424 - 6785357
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||||| |||||||||||||||  |||||  |||||| ||||||||||||||||    
T  6785424 ataggtcaaatacatctaaaggtcctttaagtttttagtttttttcaaagtggtcctttaagtttcaa 6785357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 30378836 - 30378899
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  30378836 gtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcttttaagtttcaa 30378899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 30379254 - 30379187
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||  ||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  30379254 ataggtcaaatgtatctaaaggtcctttaagtttttcgtttttcccaaagtggtcatttaagtttcaa 30379187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 2390110 - 2390176
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||| |||||||||||| ||| | ||||||||||||||||||||||||    
T  2390110 taggtcaaatgcatctaaaggtcttttaagtttttcgtttattccaaagtcgtcctttaagtttcaa 2390176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 3258712 - 3258778
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  3258712 taggtcaaatgcatataaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 3258778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 12626452 - 12626518
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| || ||||||||||| ||||||| ||||||| ||||||||||||||||    
T  12626452 taggtcaaatgcatctaaaggttctttaagttttgcattttttccaaagtggtcctttaagtttcaa 12626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 26392914 - 26392980
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||  ||||||| ||||||||||||||||||||||| |||||| ||||| ||||||||||    
T  26392914 taggtcaaatgtatctaaaggtcctttaagtttttcatttttcacaaagtggtcctctaagtttcaa 26392980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 12626871 - 12626806
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||  |||||||| ||||||||||||||||    
T  12626871 aggtcaaatgcatctaaaggtcctttaagtttttcgtttcccccaaagtggtcctttaagtttcaa 12626806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 29050507 - 29050442
Alignment:
Q  288 ggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  29050507 ggtcaaatgcatctaaaggtccttttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 29050442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 2707306 - 2707366
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtt 348  Q
    |||||||| ||| |||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  2707306 ggtcaaatgcatataaaggtcctttaagtttttcgttttttccaaagtcgtcctttaagtt 2707366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 26196676 - 26196609
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| ||||||||||||||  |||||||| |||||| ||||| ||||||| ||||||||||||||||    
T  26196676 ataggacaaatacatctaaaaatcctttaaatttttcgttttttccaaagtagtcctttaagtttcaa 26196609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 1077472 - 1077407
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| | |||||| |||||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  1077472 aggtcaaatgcgtctaaaggtcctttaagtttttcgtttttcctaaagtggtcatttaagtttcaa 1077407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 291 - 352
Target Start/End: Complemental strand, 3259127 - 3259066
Alignment:
Q  291 caaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| ||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  3259127 caaatgcatttaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 3259066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 3408035 - 3408100
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||||   ||| ||||||||||||    
T  3408035 aggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaacaagtcatttaagtttcaa 3408100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 10256054 - 10256119
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||||||| ||||||||||| |||||   ||||| ||||||||||||||||    
T  10256054 aggtcaaatgcatctaaatgtcccttaagtttttcgttttttttaaagtggtcctttaagtttcaa 10256119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 17942855 - 17942920
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||| |||| |||||||||||||||| ||||| ||||||| ||| ||||||||||||    
T  17942855 aggtcaaatgcatttaaaggtcctttaagtttttcgttttttccaaagtggtcatttaagtttcaa 17942920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 1077052 - 1077116
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||||||| ||||| ||||||||||||  |||||| ||||||||||||||||    
T  1077052 ggtcaaatgtatctaaatgtcttttaaatttttcatttttttcaaagtggtcctttaagtttcaa 1077116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 25820456 - 25820520
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||  || ||||||||| |||||||||| ||| ||||||||||||||||||    
T  25820456 ggtcaaatgcatctaaagatcgtttaagtttatcatttttcctaaactcgtcctttaagtttcaa 25820520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 288 - 347
Target Start/End: Original strand, 17514934 - 17514993
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagt 347  Q
    |||||||| ||||||||  | ||||||||||||| |||||||||||||| ||||||||||    
T  17514934 ggtcaaatgcatctaaagatactttaagtttttcgtttttcccaaagtcatcctttaagt 17514993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 2390501 - 2390435
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||| |||||||| | |||||||  |||||||| |||||||||||||    
T  2390501 taggtcaaatgcatctaaaggtccattaagtttattatttttctaaaagtcgttctttaagtttcaa 2390435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 6785006 - 6785072
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| || ||||||||||||| |||||  |||||| |||||||| |||||||    
T  6785006 taggtcaaatgcatctaaaggttctttaagtttttcgtttttttcaaagtggtcctttatgtttcaa 6785072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 9382362 - 9382428
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| ||||||| |||||||||||||||| |||||  ||||||  | |||||||||||||    
T  9382362 taggtcaaatatatctaaaggtcctttaagtttttcgtttttttcaaagtgatactttaagtttcaa 9382428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 11133690 - 11133755
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||  || ||||| |||||| |||||||||||||| |||||||||||||||    
T  11133690 taggtcaaatgcatctaaagatc-tttaaatttttcgtttttcccaaagtcatcctttaagtttcaa 11133755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 6503564 - 6503600
Alignment:
Q  316 tttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||||||||||||||||||||||||||||||    
T  6503564 tttttcgtttttcccaaagtcgtcctttaagtttcaa 6503600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 12612759 - 12612819
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| |||||||||||||||  ||||| | ||||| ||||||||||||||||    
T  12612759 aaatgcatctaaaggtcctttaagttttttgttttttctaaagtggtcctttaagtttcaa 12612819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 17428175 - 17428243
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||||||||  | ||||||||||||| ||||| | ||||| ||||||||| ||||||    
T  17428175 tataggtcaaatgcatctaaagattctttaagtttttcgttttttctaaagtggtcctttaaatttcaa 17428243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 26936823 - 26936757
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagt-ttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| | |||||||| ||||||||||| ||||| ||||||| | ||| ||||||||||||||||    
T  26936823 aggtcaactgcatctaaaggtcctttaagttttttcgtttttcctanagtggtcctttaagtttcaa 26936757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 10256473 - 10256407
Alignment:
Q  287 aggtcaaatacatctaaatg-tcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||||||   ||||||||||||||| ||||||  ||||| ||||||||||||||||    
T  10256473 aggtcaaatgcatctaaaaaatcctttaagtttttcgtttttcttaaagtggtcctttaagtttcaa 10256407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 16193122 - 16193191
Alignment:
Q  285 ataggtcaaatacatctaaat--gtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||| ||||   || ||||||||||||| ||||| |||||||  |||||||||||||||    
T  16193122 ataggtcaaatacatttaaagaggtactttaagtttttcgttttttccaaagtgatcctttaagtttcaa 16193191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 31376157 - 31376087
Alignment:
Q  284 tataggtcaaatacatctaaatgtccttt-aagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||||||| |||||||| | |||||| ||||||  |||||||||||||||    
T  31376157 tataggtcaaatgcatctaaaagtccttttaagttttttcgtttttctcaaagtgatcctttaagtttcaa 31376087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 17428570 - 17428502
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||| |||| ||| |||||||||||| |||||  ||||||  || ||||||||||||    
T  17428570 tataggtcaaatgcatttaaaggtcttttaagtttttcgtttttttcaaagtgatcatttaagtttcaa 17428502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 9e-24; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 9276388 - 9276456
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9276388 tatatgtcaaatgcatataaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 9276456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 9331579 - 9331647
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9331579 tatatgtcaaatgcatataaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 9331647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 12759657 - 12759721
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12759657 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 12759721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 37838535 - 37838467
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  37838535 tataggtcaaatgcatctaaaggtcctttaagtttttcatttttcctaaagtcgtcctttaagtttcaa 37838467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 2456247 - 2456180
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  2456247 ataggtcaaatgcatctaaaagtcctttaagtttttcatttttcccaatgtcgtcctttaagtttcaa 2456180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 23673199 - 23673132
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  23673199 ataggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 23673132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 278 - 352
Target Start/End: Original strand, 23671709 - 23671783
Alignment:
Q  278 atattctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  23671709 atattttataggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcatttaagtttcaa 23671783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 920839 - 920904
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  920839 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 920904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 37732099 - 37732164
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  37732099 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcttttaagtttcaa 37732164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 771883 - 771947
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  771883 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctttaagtttcaa 771947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 41500409 - 41500473
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  41500409 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctttaagtttcaa 41500473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 28650331 - 28650397
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||||||||||||||||||||| || ||||||||||||||||||||||    
T  28650331 taggtcaaatgcatctaaaggtcctttaagtttttcattttccctaaagtcgtcctttaagtttcaa 28650397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 33106878 - 33106940
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  33106878 tcaaatgcatctaaaactcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 33106940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 33107294 - 33107228
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  33107294 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 33107228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 36444552 - 36444487
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  36444552 aggtcaaatgcatttaaatgtcctttaagtttttcgtttttctcaaagtcgtcctttaagtttcaa 36444487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 772272 - 772205
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  772272 tataggtcaaatgcatctaaatgtc-tttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 772205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 3358053 - 3358121
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||||||||||| ||||||  ||||||||||| ||||||||||||||||||||||||    
T  3358053 tataggtcaaatgcatctaaatgttctttaaaattttcattttttccaaagtcgtcctttaagtttcaa 3358121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 8899915 - 8899851
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||||||||||||||||  |||||||||||||||||||||||    
T  8899915 ggtcaaatgcatctaaaggtcctttaagtttttcatttttttcaaagtcgtcctttaagtttcaa 8899851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 9276808 - 9276744
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  9276808 ggtcaaatgcatctaaaggtcatttaagtttttcatttttcctaaagtcgtcctttaagtttcaa 9276744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 27328822 - 27328754
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  27328822 tataggtcaaatgcatctaaaggtcctttaagtttttcatttttttcaaagtggtcctttaagtttcaa 27328754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 40854843 - 40854779
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| || |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  40854843 ggtcagatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtcctttaagtttcaa 40854779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 41178342 - 41178278
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  41178342 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgtcctttaagtttcaa 41178278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 11949331 - 11949397
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  11949331 taggtcaaatgcatctaaaagtcctttaagtttttcattttttccaaagtggtcatttaagtttcaa 11949397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 19180657 - 19180591
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||| | |||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  19180657 taggttaaatgcgtctaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaa 19180591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 28650753 - 28650687
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  28650753 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagttgtcctttaagtttcaa 28650687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 2056744 - 2056809
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||| |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  2056744 aggttaaatacttctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 2056809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 2094317 - 2094381
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  2094317 aggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaa-tcgtcctttaagtttcaa 2094381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 27328400 - 27328469
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaag-tttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||||| ||||||||||||||| ||||||    
T  27328400 tataggtcaaatgcatctaaatgtcctttaagttttttcgtttttcctaaagtcgtcctttaaatttcaa 27328469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 36211282 - 36211217
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  36211282 aggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 36211217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 41177942 - 41178006
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  41177942 aggttaaatgcatctaaaggtc-tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 41178006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 41500817 - 41500752
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  41500817 aggtcaaatgcatctaaaggtcatttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 41500752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 42630197 - 42630132
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  42630197 aggtcaaatgcatctaaaggtcttttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 42630132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 2057163 - 2057096
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  2057163 tataggtcaaatgcatctaaaggtcctttaagtttttca-ttttcccaaagtggtcttttaagtttcaa 2057096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 16246516 - 16246452
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  16246516 ggtcaaatgcatctaaaggtcctttaagtttttcgtttgtcccaaagttgtcctttaagtttcaa 16246452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 36444135 - 36444199
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||  || |||||||||||||||||| ||||||||||||||||||||||||    
T  36444135 ggtcaaatgcatctaaagatcttttaagtttttcattttttccaaagtcgtcctttaagtttcaa 36444199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 19915915 - 19915978
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| |||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  19915915 gtcaaatgcatctaaaagtcctttaagtttttcgtttttcctaaagtggtcctttaagtttcaa 19915978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 8899510 - 8899564
Alignment:
Q  298 atctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| || ||||||||||||||||||||||||| ||||||||||||||||||    
T  8899510 atctaaaggttctttaagtttttcatttttcccaaaatcgtcctttaagtttcaa 8899564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 42629801 - 42629867
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||  ||||||||||||||| |||||| |||||| ||||||||||||||||    
T  42629801 taggtcaaatgcatctaaagatcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 42629867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 43249321 - 43249383
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||  ||||||||||||    
T  43249321 tcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtggtaatttaagtttcaa 43249383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 17484456 - 17484521
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| || ||||||||||||| |||||| |||||| ||||||||||||||||    
T  17484456 aggtcaaatgcatctaaaggttctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 17484521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 285 - 342
Target Start/End: Original strand, 22066573 - 22066630
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctt 342  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||    
T  22066573 ataggtcaaatgcatctaaaggtcctttcagtttttcatttttctcaaagtcgtcctt 22066630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 31214141 - 31214076
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||||||| ||||||    
T  31214141 aggtcaaatgcatctaaaggtcttttaagtttttcgtttttcccaaagtggtcctttaactttcaa 31214076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 37654332 - 37654263
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagt-ttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||||||||||| ||||| ||||| ||||||| ||||||||||||||||    
T  37654332 tataggtcaaatgcatctaaaggtcctttaagttttttcgttttttccaaagtggtcctttaagtttcaa 37654263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 2094707 - 2094643
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||| |||||||||| |||||||||    
T  2094707 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttctcaaagtcgtcttttaagttt 2094643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 2314882 - 2314946
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||||||||| |||| | ||||||| ||||||||||||||||    
T  2314882 ggtcaaatgcatctaaaagtcctttaagttttttatttcttccaaagtggtcctttaagtttcaa 2314946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 2455832 - 2455892
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| || ||||||||||||| ||||| ||||||||||||||||||||||||    
T  2455832 aaatgcatctaaaggttctttaagtttttcgttttttccaaagtcgtcctttaagtttcaa 2455892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 9331990 - 9331926
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| | || ||| ||| |||||||||||||||||||| ||||||||||||||||||||||    
T  9331990 ggtcaaatgcctccaaaggtcatttaagtttttcatttttcctaaagtcgtcctttaagtttcaa 9331926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 33865589 - 33865529
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||| |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||    
T  33865589 gtcaaatgcatctaaaggtcttttaagtttttcgtttttcccaaagtggtcctttaagttt 33865529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 37838094 - 37838162
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||  ||||||| |||||||||||||||| |||||  ||||||| |||||||||||||||    
T  37838094 tataggtcaaatgtatctaaaggtcctttaagtttttcgtttttttcaaagtcatcctttaagtttcaa 37838162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 8396847 - 8396781
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||| ||| |||| |||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  8396847 taggttaaatgcatttaaaggtcctttaagtttttcgtttttcctaaagtggtcctttaagtttcaa 8396781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 12760074 - 12760008
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||  ||||||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||    
T  12760074 taggtcaaatgtatctaaaggtcatttaagtttttcgttttttccaaagtcgtcttttaagtttcaa 12760008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 31187467 - 31187401
Alignment:
Q  287 aggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||| ||||||||| ||||||||||||| ||| ||||||||||||    
T  31187467 aggtcaaatgcatctaaaggtccttttaagtttttcgtttttcccaaagtggtcttttaagtttcaa 31187401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 31195527 - 31195461
Alignment:
Q  287 aggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||| ||||||||| ||||||||||||| ||| ||||||||||||    
T  31195527 aggtcaaatgcatctaaaggtccttttaagtttttcgtttttcccaaagtggtcttttaagtttcaa 31195461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 921257 - 921192
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||  |||||| |||||||||||||||||||  |||||||||| ||||||||||||    
T  921257 aggtcaaatgcattcaaatgttctttaagtttttcatttttttcaaagtcgtcttttaagtttcaa 921192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 2315297 - 2315234
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||    
T  2315297 ggtcaaatgtatctaaaggtcctttaagtttttcgtttttctcaaagtcgt-ctttaagtttcaa 2315234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 352
Target Start/End: Original strand, 19180262 - 19180304
Alignment:
Q  310 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  19180262 tttaagtttttcgttttttccaaagtcgtcctttaagtttcaa 19180304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 3430531 - 3430595
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| || ||||||||||||| ||||||| ||||| || |||||||||||||    
T  3430531 aggtcaaatgcatctaaaggttctttaagtttttcgtttttcctaaagtggt-ctttaagtttcaa 3430595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 7297556 - 7297491
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||  ||||||| ||| | |||||||||| ||||| ||||||||||| ||||||||||||    
T  7297556 aggtcaaatttatctaaaagtcttataagtttttcgttttttccaaagtcgtcttttaagtttcaa 7297491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 7378780 - 7378845
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||  ||||||| || ||||||||||||| ||| ||||||||| ||| ||||||||||||    
T  7378780 aggtcaaatgaatctaaaggttctttaagtttttcgtttatcccaaagtagtcttttaagtttcaa 7378845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 14630846 - 14630787
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||| ||| |||| |||||||||||||||||||||| |||||||  ||||||||||||    
T  14630846 gtcaaatgcatgtaaaagtcctttaagtttttcattttt-ccaaagtgatcctttaagttt 14630787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 25087707 - 25087767
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||||||||||||||||||||||||||   ||||| ||| ||| ||||||||    
T  25087707 aaatgcatctaaatgtcctttaagtttttcattttttttaaagtggtcattttagtttcaa 25087767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 34253372 - 34253312
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| ||||||||||||||||||||||  |||||  ||| ||||||||||||    
T  34253372 aaatgcatctaaaggtcctttaagtttttcatttttttcaaagcggtcttttaagtttcaa 34253312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 22066714 - 22066651
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||||||||  || |||||||||||| ||||||| ||||||||| ||||| ||||||    
T  22066714 gtcaaatgcatctaaagatcttttaagtttttcgtttttcctaaagtcgtcatttaaatttcaa 22066651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 309 - 352
Target Start/End: Original strand, 28216892 - 28216935
Alignment:
Q  309 ctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||| ||||||||||||| || |||||||||||||    
T  28216892 ctttaagtttttcgtttttcccaaagtggttctttaagtttcaa 28216935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 29737567 - 29737630
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||| |||||||||||||||||  ||||| | |||||  |||||||||||||||    
T  29737567 gtcaaatgcatctacatgtcctttaagttttttgttttttctaaagtgttcctttaagtttcaa 29737630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 38750863 - 38750930
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaag-tttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||| |||||| ||||| || |||| ||| ||||||||||||    
T  38750863 taggtcaaatgcatctaaaggtcctttaagttttttcgttttttcctaagtggtcttttaagtttcaa 38750930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 45123967 - 45124030
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttc-atttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| || |||||||||||||  ||||| ||||| ||||||||||||||||||    
T  45123967 tcaaatgcatctaaaggttctttaagtttttcgtttttttccaaattcgtcctttaagtttcaa 45124030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 17484871 - 17484809
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||||||||  ||||||||||||||| |||||  |||||| ||||||||| ||||||    
T  17484871 tcaaatgcatctaaagctcctttaagtttttcgtttttttcaaagtggtcctttaaatttcaa 17484809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 352
Target Start/End: Complemental strand, 11949717 - 11949688
Alignment:
Q  323 tttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||||||||||||||    
T  11949717 tttttcccaaagtcgtcctttaagtttcaa 11949688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 17270469 - 17270405
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||| |||||||||||  |||||| |||| | ||||||||||||||||    
T  17270469 aggtcaaatgcatctaaaggtc-tttaagttttttgtttttctcaaaatggtcctttaagtttcaa 17270405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 29737982 - 29737918
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||| ||||  ||||||||||||||| |||||  |||||| ||||||||| ||||||    
T  29737982 ggtcaaatgcatataaagatcctttaagtttttcgtttttttcaaagtggtcctttaaatttcaa 29737918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 9e-24; HSPs: 104)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 7651896 - 7651832
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7651896 ggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 7651832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 48802236 - 48802302
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  48802236 taggtcaaatgcatctaaaggtcctttaagtttttcatttttctcaaagtcgtcctttaagtttcaa 48802302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 24204377 - 24204442
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  24204377 aggtcaaatgcatctaaaggtcctttaagtttttcatttttcccaaagtcgttctttaagtttcaa 24204442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 28425269 - 28425334
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  28425269 aggtcaaatgcatctaaaggtcctttaagtttttcattttttccaaagtcgtcctttaagtttcaa 28425334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 43396910 - 43396845
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  43396910 aggtcaaatgcatctaaaagtcctttaagtttttcatttttctcaaagtcgtcctttaagtttcaa 43396845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 46825766 - 46825701
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  46825766 aggtcaaatacatctaaaggtcctttaagtttttcctttttcccaaactcgtcctttaagtttcaa 46825701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 16508226 - 16508158
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  16508226 tataggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaa 16508158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 19274377 - 19274441
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  19274377 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 19274441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 38473953 - 38473885
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  38473953 tataggtcaaatgcatctaaatgtcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 38473885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 41105834 - 41105898
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  41105834 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcctttaagtttcaa 41105898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 52146840 - 52146904
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  52146840 ggtcaaatgcatctaaatgtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 52146904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 281 - 352
Target Start/End: Original strand, 34969643 - 34969714
Alignment:
Q  281 ttctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||||||||| |||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  34969643 ttctttaggtcaaatacatataaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 34969714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 50690180 - 50690113
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  50690180 ataggttaaatgcatctaaaggtcttttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 50690113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 36158002 - 36157936
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  36158002 taggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 36157936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 46051685 - 46051620
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  46051685 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 46051620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 49594868 - 49594933
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  49594868 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 49594933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 19315458 - 19315522
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||    
T  19315458 ggtcaaatacatctaaaggtccattaagtttttcatttttctcaaagtcgtcctttaaatttcaa 19315522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 21965299 - 21965235
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||||||    
T  21965299 ggtcaaatacatctaaaggtcctttaagtttttcgtttttcccaaagtgatcctttaagtttcaa 21965235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 22351032 - 22351096
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  22351032 ggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaa 22351096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 50099035 - 50099102
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||| |||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  50099035 ataggtcaaatacatttaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 50099102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 52350246 - 52350183
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  52350246 gtcaaatgcatctaaaggtcctttaagttttttgtttttcccaaagtcgtcctttaagtttcaa 52350183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 282 - 352
Target Start/End: Complemental strand, 12964872 - 12964802
Alignment:
Q  282 tctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||||||| |||||||| |||||||||||||||||||||||||||||| | | ||||||||||||    
T  12964872 tctattggtcaaatgcatctaaaagtcctttaagtttttcatttttcccaaagtggccatttaagtttcaa 12964802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 37217132 - 37217066
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||||||||| || | |||||||||||||||||||    
T  37217132 taggtcaaatgcatctaaaggtcctttaagtttttcattttttcctaggtcgtcctttaagtttcaa 37217066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 46051295 - 46051361
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||||||||||||||||||  ||||| ||||||| ||||||||||||||||    
T  46051295 taggtcaaatgcatctaaatgtcctttaagttttttgttttttccaaagtggtcctttaagtttcaa 46051361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 19315875 - 19315810
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||||||||||||||||  |||||| ||||||||||||||||    
T  19315875 aggtcaaatgcatctaaaagtcctttaagtttttcatttttttcaaagtggtcctttaagtttcaa 19315810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 24036578 - 24036643
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  24036578 aggtcaaatgcatctaaaggtcctttaaattttttatttttcccaaagtcgtccattaagtttcaa 24036643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 25800876 - 25800811
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| ||||| || |||||||||||||||||||||    
T  25800876 aggtcaaatgcatctaaaggtcctttaagtttttctttttttccgaagtcgtcctttaagtttcaa 25800811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 34971303 - 34971238
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| |||||||||||||||| |||||||||||||  |||||||||||||||    
T  34971303 aggtcaaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtgatcctttaagtttcaa 34971238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 284 - 349
Target Start/End: Original strand, 52349856 - 52349921
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||| ||||| ||||||| ||| |||||||||||||||||||||||||||||||||| |||||    
T  52349856 tataggttaaatatatctaaaggtcttttaagtttttcatttttcccaaagtcgtccttttagttt 52349921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 9878691 - 9878755
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||| ||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  9878691 ggtcaaatgcatctaactgtcctttaagtttttcgtttttcccaaagtggtcatttaagtttcaa 9878755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 12142916 - 12142976
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  12142916 aaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtcgttctttaagtttcaa 12142976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 18782412 - 18782348
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  18782412 ggtcaaatgcatctaaaagtcctttaagtttttcgtttttcccaaagtggtcatttaagtttcaa 18782348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 24204793 - 24204729
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||    
T  24204793 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtcgttctttaagtttcaa 24204729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 25800461 - 25800525
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  25800461 ggtcaaatgtatctaaaggtcctttaagtttttcgtttttcccaaagtcgtcttttaagtttcaa 25800525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 26070130 - 26070062
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||  || |||| ||||||||| ||||||||||||| |||||||||||||||||||||||    
T  26070130 tataggtcaaatgtatttaaaggtcctttaaatttttcatttttctcaaagtcgtcctttaagtttcaa 26070062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 37216714 - 37216778
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||  ||||||||||||||| |||||| |||||||||||||||||||||||    
T  37216714 ggtcaaatgcatctaaagttcctttaagtttttcgtttttctcaaagtcgtcctttaagtttcaa 37216778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 46825351 - 46825411
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  46825351 aaatgcatctaaaggtcctttaagtttttcgtttttctcaaagtcgtcctttaagtttcaa 46825411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 5401103 - 5401040
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  5401103 gtcaaatgcatctaaaagtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 5401040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 9962988 - 9962921
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||| |||||| ||||||||||||||||    
T  9962988 ataggtcaaatgcatttaaaggtcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 9962921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 26549625 - 26549558
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| ||||||| || |||||||| |||||||||||  ||||||||||||||||||||||    
T  26549625 ataggtcaaatatatctaaaggtactttaagtgtttcatttttcttaaagtcgtcctttaagtttcaa 26549558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 33325964 - 33325897
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||| |||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  33325964 ataggtcgaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 33325897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 44977126 - 44977193
Alignment:
Q  286 taggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||||    
T  44977126 taggtcaaatgcatctaaatgtccttttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 44977193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 285 - 352
Target Start/End: Original strand, 45670390 - 45670457
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| ||||||||  ||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  45670390 ataggtcaaatgcatctaaagatcctttaagtttttcgttttttccaaagtggtcctttaagtttcaa 45670457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 26549204 - 26549270
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||  ||||| | ||||||||||||||||||||||    
T  26549204 taggtcaaatgcatctaaaggtcctttaagttttttgttttttcaaaagtcgtcctttaagtttcaa 26549270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 349
Target Start/End: Original strand, 43396521 - 43396583
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||| |||| ||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  43396521 aggttaaatgcatctaaatgtcctttaagtttttagttttttccaaagtcgtcctttaagttt 43396583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 44978677 - 44978739
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||| |||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  44978677 tcaaatgcatttaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 44978739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 9974663 - 9974724
Alignment:
Q  292 aaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  9974663 aaatgcatctaaatgtccttttaagtttttcgtttttcccaaagtggtcctttaagtttcaa 9974724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 33673834 - 33673899
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| |||||||| ||||||| |||||||  ||||||| ||||||||||||||||||||||    
T  33673834 aggtcaaatgcatctaaaggtcctttgagttttttgtttttccaaaagtcgtcctttaagtttcaa 33673899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 287 - 351
Target Start/End: Complemental strand, 18917759 - 18917695
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttca 351  Q
    ||||||||| ||| |||| || ||||||||||||| ||||||||||||| |||||||||||||||    
T  18917759 aggtcaaatgcatttaaaggttctttaagtttttcgtttttcccaaagtggtcctttaagtttca 18917695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 19274796 - 19274729
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| |||||||||||||||||||| |  ||||||||||| |||||||||||    
T  19274796 tataggtcaaatgcatctaaaggtcctttaagtttttcatttct-tcaaagtcgtccgttaagtttcaa 19274729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 23228521 - 23228453
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||  |||||||| ||||||| ||||||| |||||| |||||| ||||||||||||||||    
T  23228521 tataggtcaaatgtatctaaatctcctttatgtttttcgtttttctcaaagtggtcctttaagtttcaa 23228453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 23767322 - 23767386
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  |||||||  ||||||||||||||||||||||| ||||| ||||||||||||||||    
T  23767322 ggtcaaatgtatctaaagatcctttaagtttttcatttttcctaaagtggtcctttaagtttcaa 23767386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 24036766 - 24036699
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||||||||||||||||||||||   ||||| ||||||||||||||||    
T  24036766 tataggtcaaatgcatctaaaagtcctttaagtttttcattttt-ttaaagtggtcctttaagtttcaa 24036699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 26069711 - 26069774
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||| |||||||||||||||||||||  |||||||||| ||||||||||||    
T  26069711 ggtcaaattcatctaaat-tcctttaagtttttcatttttttcaaagtcgtcatttaagtttcaa 26069774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 52147223 - 52147163
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  52147223 aaatgcatctaaaggtcctttaagtttttcgtttttcccaaagtggtcctttaaatttcaa 52147163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 38473542 - 38473597
Alignment:
Q  297 catctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| ||||||||||||| ||||||||||||| || |||||||||||||    
T  38473542 catctaaatgttctttaagtttttcgtttttcccaaagtggtactttaagtttcaa 38473597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 30281847 - 30281781
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||  ||||||| ||||||||| |||||| |||||| |||||| ||||||||||||||||    
T  30281847 taggtcaaatgtatctaaaggtcctttaaatttttcgtttttctcaaagttgtcctttaagtttcaa 30281781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 33194576 - 33194642
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||| ||  ||||||||||||||| ||||||||||||| |||||||||| |||||    
T  33194576 taggtcaaatgcatctgaagatcctttaagtttttcgtttttcccaaagtggtcctttaagcttcaa 33194642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 46095000 - 46095046
Alignment:
Q  306 gtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||    
T  46095000 gtcctttaagtttttcatttttttcaaagtcgtcctttaagtttcaa 46095046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 46095396 - 46095334
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| ||||||||| |||||| |||||  |||||||||||||||||||||||    
T  46095396 tcaaatgcatctaaaggtcctttaaatttttcgtttttttcaaagtcgtcctttaagtttcaa 46095334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 16705716 - 16705781
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||| |||||||| |||||||||||||||| ||||| ||||||| ||| ||||||||||||    
T  16705716 aggtgaaatgcatctaaaggtcctttaagtttttcgttttttccaaagtggtcatttaagtttcaa 16705781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 352
Target Start/End: Complemental strand, 45670789 - 45670716
Alignment:
Q  279 tattctataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||| ||||| |||||||| |||||||||||||||| ||||| | ||||| ||| ||||||||||||    
T  45670789 tattttataggacaaatgcatctaaaggtcctttaagtttttcgttttttctaaagtggtcatttaagtttcaa 45670716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 49973759 - 49973824
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||  || ||||||| |||| |||||| |||| ||||||||||||||||||    
T  49973759 aggtcaaatacatctaaagatcttttaagtatttcgtttttctcaaaatcgtcctttaagtttcaa 49973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 285 - 349
Target Start/End: Complemental strand, 6711708 - 6711644
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||||| |||||||| ||||||||||||||||||||||   ||| | |||||||||||||    
T  6711708 ataggtcaaatgcatctaaaggtcctttaagtttttcattttttttaaaatggtcctttaagttt 6711644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 16505144 - 16505208
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||  ||||||||||||||  |||||||| |||||||||| ||||||||||    
T  16505144 ggtcaaatgcatctaaagatcctttaagtttttagtttttcccgaagtcgtcctataagtttcaa 16505208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 352
Target Start/End: Complemental strand, 16706100 - 16706040
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| || ||||||||||||| ||||||| ||||| ||||||||||||||||    
T  16706100 aaatgcatctaaaggttctttaagtttttcgtttttcctaaagtggtcctttaagtttcaa 16706040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 292 - 352
Target Start/End: Original strand, 18892180 - 18892240
Alignment:
Q  292 aaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||| |||||||||||||||| |||||  |||||||||| ||||||||||||    
T  18892180 aaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtcgtcatttaagtttcaa 18892240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 18917343 - 18917407
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| ||||||||  ||||||||||||||| |||||| ||||||  |||||||||||||||    
T  18917343 ggtcaaatgcatctaaagatcctttaagtttttcgtttttctcaaagtgatcctttaagtttcaa 18917407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 25988178 - 25988242
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  || |||| ||| |||||||||||||||||| ||||| ||||||||||||||||||    
T  25988178 ggtcaaatgtatgtaaaggtcttttaagtttttcattttttccaaaatcgtcctttaagtttcaa 25988242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 45350625 - 45350688
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||| | ||| ||||||||||||||||||  |||||||||||||||||||||||    
T  45350625 ggtcaaatgcatctataggtc-tttaagtttttcatttttttcaaagtcgtcctttaagtttcaa 45350688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 12143303 - 12143242
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||| |||||||||||||||||| |||||||||| |||||||||||||    
T  12143303 gtcaaatgcatctaaaggtc-tttaagtttttcattttttccaaagtcgt-ctttaagtttcaa 12143242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 352
Target Start/End: Complemental strand, 17990077 - 17990026
Alignment:
Q  301 taaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||||||||||||||| |||||  |||||||||||||||||||||||    
T  17990077 taaaggtcctttaagtttttcgtttttttcaaagtcgtcctttaagtttcaa 17990026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 285 - 352
Target Start/End: Complemental strand, 32373878 - 32373811
Alignment:
Q  285 ataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||| ||||||||  ||||||||||||||  |||||  |||||| ||||||||||||||||    
T  32373878 ataggtcaaatgcatctaaagatcctttaagttttttgtttttttcaaagtggtcctttaagtttcaa 32373811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 352
Target Start/End: Original strand, 36157594 - 36157649
Alignment:
Q  298 atctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||| || |||||| ||||||||||||| ||||||||||||||||    
T  36157594 atctaaatgtccttttaaatttttcgtttttcccaaagtggtcctttaagtttcaa 36157649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 40721195 - 40721262
Alignment:
Q  286 taggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| | ||||| ||||||||  ||||||||||||| ||||||||||||||||    
T  40721195 taggtcaaatgcatctaaaaggccttttaagttttttgtttttcccaaagtggtcctttaagtttcaa 40721262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 352
Target Start/End: Complemental strand, 45351029 - 45350974
Alignment:
Q  298 atctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||| ||||||||||||    
T  45351029 atctaaaggtccttttaagtttttcgtttttcccaaagtcgtcttttaagtttcaa 45350974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 50689792 - 50689855
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| ||||| ||||||||| | |||| |||||||||||||||||||||||||    
T  50689792 tcaaatgcatctaaaggtcctctaagttttttcgttttccccaaagtcgtcctttaagtttcaa 50689855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 7553336 - 7553275
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| ||| |||||||||||| ||||| ||||||||||| ||||||||||||    
T  7553336 tcaaatgcatctaaa-gtcttttaagtttttccttttttccaaagtcgtcatttaagtttcaa 7553275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 23767739 - 23767673
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||| |||||||| |||| ||||||||||  ||||| | ||||||||||||||||||||||    
T  23767739 taggttaaatgcatctaaaggtcccttaagttttttgttttttctaaagtcgtcctttaagtttcaa 23767673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 290 - 352
Target Start/End: Complemental strand, 33194943 - 33194881
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| |||||||||||||||| |||||   ||||| ||||||||||||||||    
T  33194943 tcaaatgcatctaaaagtcctttaagtttttcgttttttttaaagtggtcctttaagtttcaa 33194881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 36781077 - 36781143
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| ||| |||||||||||| |||||   ||||| ||||||||||||||||    
T  36781077 taggtcaaatgcatctaaaggtcttttaagtttttcgtttttttgaaagtggtcctttaagtttcaa 36781143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 40721559 - 40721513
Alignment:
Q  306 gtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||| |||||||||||||  |||||||||||||||    
T  40721559 gtcctttaagtttttcgtttttcccaaagtgatcctttaagtttcaa 40721513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 48802645 - 48802582
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagt-ttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||||||||||||||| ||||| |||||| |||||||||  ||||||||||||    
T  48802645 ggtcaaatgcatctaaatgtcctttaagttttttcgtttttctcaaagtcgt--tttaagtttcaa 48802582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 49595267 - 49595201
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||||||| |||||||||||||||  |||||| |||| | ||| ||||||||||||    
T  49595267 taggtcaaatgcatctaaaagtcctttaagttttttgtttttctcaaaatggtcatttaagtttcaa 49595201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 7552922 - 7552987
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||| |||| | |||||||||||||||||||| ||||| | ||| ||||||||||||    
T  7552922 aggtcaaatgcatttaaagggcctttaagtttttcattttttccaaaatggtcttttaagtttcaa 7552987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 36781455 - 36781402
Alignment:
Q  299 tctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||||||| |||||   ||||| ||||||||||||||||    
T  36781455 tctaaatgtcctttaagtttttcgttttttttaaagtggtcctttaagtttcaa 36781402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 6710916 - 6710983
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||  ||||||  ||| |||||||||||| |||||| |||||| ||||||||||||||||    
T  6710916 tataggtcaaatgtatctaagggtc-tttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 6710983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 18781996 - 18782060
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||| |||||  |||||| || ||||| |||||||    
T  18781996 ggtcaaatgcatctaaaggtcctttaagtttttcgtttttttcaaagtggttctttatgtttcaa 18782060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 34868634 - 34868578
Alignment:
Q  297 catctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||| |||||||||||||||   ||||| ||||||||||||||||    
T  34868634 catctaaatgtccttttaagtttttcattttttttaaagtggtcctttaagtttcaa 34868578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 348
Target Start/End: Original strand, 50533201 - 50533261
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtt 348  Q
    ||||||||  || |||| |||||||||||||||||||||| ||||||| ||| ||||||||    
T  50533201 ggtcaaatgtatttaaaggtcctttaagtttttcattttttccaaagtggtcatttaagtt 50533261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Original strand, 5400690 - 5400753
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| | | |||||||||||| ||||||| |||||  |||||||||||||||    
T  5400690 gtcaaatgcatctaaaggacttttaagtttttcgtttttcctaaagtgatcctttaagtttcaa 5400753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 21929758 - 21929696
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| |||||||| ||| |||||||||||| ||||| | ||||| ||||||||||||||||    
T  21929758 gtcaaatgcatctaaaggtc-tttaagtttttcgttttttctaaagtggtcctttaagtttcaa 21929696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 345
Target Start/End: Original strand, 43380672 - 43380727
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaa 345  Q
    |||||| |||||||||||| |||||||||||| ||||||| |||||  ||||||||    
T  43380672 tcaaatgcatctaaatgtcatttaagtttttcgtttttcctaaagtgatcctttaa 43380727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 49094619 - 49094682
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttt-tcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| ||| |||| |||||||||||||| |||||||||| |||||  |||||||||||||||    
T  49094619 tcaaatgcatttaaaggtcctttaagttttttcatttttcctaaagtgatcctttaagtttcaa 49094682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 327
Target Start/End: Original strand, 52067553 - 52067596
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcattttt 327  Q
    ||||||||||||| ||||||| |||||||||||||||| |||||    
T  52067553 tataggtcaaatatatctaaaggtcctttaagtttttcgttttt 52067596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 4245132 - 4245198
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||||||| ||||| ||||||||||||||| |||||   ||||| ||| ||||||||||||    
T  4245132 taggttaaatacatttaaatatcctttaagtttttcgttttttgtaaagtggtcatttaagtttcaa 4245198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 6711656 - 6711610
Alignment:
Q  306 gtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||||||||||||||||  |||| | ||||||||||||||||    
T  6711656 gtcctttaagtttttcatttttttcaaaatggtcctttaagtttcaa 6711610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 352
Target Start/End: Original strand, 7651509 - 7651571
Alignment:
Q  290 tcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||| |||||||| |||||||||||||||| ||||| | ||||| || |||||| ||||||    
T  7651509 tcaaatgcatctaaaggtcctttaagtttttcgttttttctaaagttgttctttaaatttcaa 7651571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 23228099 - 23228165
Alignment:
Q  288 ggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcc-tttaagtttcaa 352  Q
    |||||||| ||||||||||| |||| |||||||||||||||| ||||||  ||| ||||||||||||    
T  23228099 ggtcaaatgcatctaaatgttcttttaagtttttcatttttctcaaagtgatccttttaagtttcaa 23228165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 49095036 - 49094970
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| |||| ||| || ||||||||||||| ||||||| |||||  || ||||||||||||    
T  49095036 taggtcaaatgcatccaaaggttctttaagtttttcgtttttcctaaagtgatcttttaagtttcaa 49094970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 352
Target Start/End: Original strand, 49814116 - 49814182
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| |||| |||||||| ||||||||| ||||| | ||||||| ||||| ||||||||||||||||    
T  49814116 aggtaaaatgcatctaaaggtcctttaaattttttcgtttttcctaaagtggtcctttaagtttcaa 49814182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 49814536 - 49814470
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagt-ttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||| ||||| || ||||||||||| ||||| |||||||||||||  |||| ||||||||||    
T  49814536 aggtcaaatgcatctcaaggtcctttaagttttttcgtttttcccaaagtgatcctataagtttcaa 49814470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 352
Target Start/End: Complemental strand, 49974046 - 49974004
Alignment:
Q  310 tttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||||||||||  ||||| ||||||||||||||||    
T  49974046 tttaagtttttcatttttcttaaagttgtcctttaagtttcaa 49974004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 7609090 - 7609025
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||  || |||| |||||||||||||||| ||||| | |||||  |||||||||||||||    
T  7609090 aggtcaaatgtatttaaaggtcctttaagtttttcgttttttctaaagtaatcctttaagtttcaa 7609025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 5834 - 5770
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  5834 ggtcaaatgcatctaaaggtcctttaagtttttagtttttcccaaagtcgtcctttaagtttcaa 5770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 2084 - 2016
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||| ||| ||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  2084 tataggtcaaatgcatcaaaaggtcctttaaatttttcgtttttcccaaagtggtcctttaagtttcaa 2016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 14492 - 14560
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| |||||||||||||||| |||||| |||| | ||||||||||||||||    
T  14492 tataggtcaaatgcatctaaaggtcctttaagtttttcgtttttctcaaaattgtcctttaagtttcaa 14560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 352
Target Start/End: Complemental strand, 101324 - 101260
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  101324 ggtcaaatgcatctaaaggtcatttaagtttttcgttttttccaaagtcgtcctttaagtttcaa 101260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 218670 - 218737
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||| |||||||||||  ||||||||||||||||||||||||||||||    
T  218670 tataggtcaaatgcatctaaaggtc-tttaagttttttgtttttcccaaagtcgtcctttaagtttcaa 218737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 219124 - 219056
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||  ||||| ||| ||||||||||||    
T  219124 tatagatcaaatgcatctaaaggtcctttaagtttttcatttttcttaaagtggtcttttaagtttcaa 219056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 289 - 352
Target Start/End: Complemental strand, 252760 - 252697
Alignment:
Q  289 gtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||| ||| ||||||||||||||||||||| |||||| |||||| ||||||||||||||||    
T  252760 gtcaaatgcatttaaatgtcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 252697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 252344 - 252409
Alignment:
Q  288 ggtcaaatacatctaaatgtccttt-aagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    ||||||||  ||||||| ||||||| ||||||||||||||||| ||||| || |||||| ||||||    
T  252344 ggtcaaatgaatctaaaggtccttttaagtttttcatttttcctaaagtggttctttaaatttcaa 252409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 12911 - 12977
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| |||||||||||||||| |||||| |||||| ||||||||||||||||    
T  12911 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 12977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 59933 - 59867
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||| |||| |||||||||||||||| |||||| |||||| ||||||||||||||||    
T  59933 taggtcaaatgcatttaaaggtcctttaagtttttcgtttttctcaaagtggtcctttaagtttcaa 59867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 3275 - 3343
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||| ||||||| |||||||| || ||||||||||||||||||| |||||||  |||||||||||||||    
T  3275 tatatgtcaaatgcatctaaaggtgctttaagtttttcattttttccaaagtgatcctttaagtttcaa 3343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 349
Target Start/End: Complemental strand, 5419 - 5358
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagttt 349  Q
    |||||||| |||||||| |||||||||||||||| ||||| | ||||| |||||||||||||    
T  5419 ggtcaaatgcatctaaaggtcctttaagtttttcgttttttctaaagtggtcctttaagttt 5358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 4998 - 5065
Alignment:
Q  286 taggtcaaatacatctaaatgtcctttaagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||| ||||||||  ||||| |||||||| | ||||||| ||||| ||||||||||||||||    
T  4998 taggtcaaatgcatctaaagatccttgaagttttttcgtttttcctaaagtggtcctttaagtttcaa 5065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 11182 - 11239
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtccttta 344  Q
    ||||||||| |||||||| ||| |||||||||||| ||||||||||||| ||||||||    
T  11182 aggtcaaatgcatctaaaagtcttttaagtttttcgtttttcccaaagtggtccttta 11239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0693 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0693
Description:

Target: scaffold0693; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 4935 - 4998
Alignment:
Q  288 ggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||| |||||||| ||||||||||||||||  |||| ||||||| ||||||||||||||||    
T  4935 ggtcaaatgcatctaaaagtcctttaagtttttc-gttttaccaaagtggtcctttaagtttcaa 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 352
Target Start/End: Complemental strand, 808 - 738
Alignment:
Q  284 tataggtcaaatacatctaaatgtccttt-aagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||    
T  808 tataggtcaaatgcatctaaaggtccttttaagttttttcgtttttcccaaagtggtccttttagtttcaa 738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 1785 - 1855
Alignment:
Q  284 tataggtcaaatacatctaaatgtccttt-aagttttt-catttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| ||||||| |||||||| | ||||||||||||| ||||||| ||||||||    
T  1785 tataggtcaaatgcatctaaaggtccttttaagttttttcgtttttcccaaagtggtccttttagtttcaa 1855  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 284 - 352
Target Start/End: Original strand, 47776 - 47844
Alignment:
Q  284 tataggtcaaatacatctaaatgtcctttaagtttttcatttttcccaaagtcgtcctttaagtttcaa 352  Q
    |||||||||||| |||||||| | | |||||||||||| |||||   ||||| ||||||||||||||||    
T  47776 tataggtcaaatgcatctaaaggacttttaagtttttcgttttttttaaagtggtcctttaagtttcaa 47844  T

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Target: scaffold1986 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1986
Description:

Target: scaffold1986; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 287 - 349
Target Start/End: Complemental strand, 321 - 258
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagt-ttttcatttttcccaaagtcgtcctttaagttt 349  Q
    ||||||||| |||||||| ||||||||||| ||||| ||||| ||||||| ||||||| |||||    
T  321 aggtcaaatgcatctaaaggtcctttaagttttttcgttttttccaaagtggtccttttagttt 258  T

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Target: scaffold0416 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 6589 - 6629
Alignment:
Q  287 aggtcaaatacatctaaatgtcctttaagtttttcattttt 327  Q
    ||||||||| |||| |||||||||||||||||||| |||||    
T  6589 aggtcaaatgcatccaaatgtcctttaagtttttcgttttt 6629  T

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