View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1140_low_37 (Length: 304)
Name: NF1140_low_37
Description: NF1140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1140_low_37 |
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Alignment Details
Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 79 - 252
Target Start/End: Complemental strand, 7110144 - 7109971
Alignment:
| Q |
79 |
attattcttttgtagttttagatggcctcaagatcgccgtcgacattatcttgaagttttcaacgaaaagcatatgccatgcgataattgcacatgggta |
178 |
Q |
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| T |
7110144 |
attattcttttgtagttttagatggcatcaagatcgccgtcgtcattatcttgatgttttcaacgaaaagcatatgccatgcgataattgcacatgggta |
7110045 |
T |
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| Q |
179 |
atacatgcaaagggaggttgtttgaatggacaatgtattccttggagaagcatccattaatggatgcatacaac |
252 |
Q |
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| T |
7110044 |
atacatgcaaatggaggctgtttgaatggacaatgtattccttggaaaagcatccattaatggatgcatacaac |
7109971 |
T |
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