View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1140_low_40 (Length: 283)
Name: NF1140_low_40
Description: NF1140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1140_low_40 |
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Alignment Details
Target: chr1 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 62 - 222
Target Start/End: Original strand, 6451364 - 6451524
Alignment:
| Q |
62 |
attaaataacatctctgcgtctgcatcatgtggctctgtgacatggttggtgtcaccgaacatcacaggctacacttatggtcatatattccttcccctt |
161 |
Q |
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| T |
6451364 |
attaaataacatctctgcgtctgcatcatgtggctctgtgacctggttggtgtcaccgaacatcacaggctacacttatggtcatatattccttcccctt |
6451463 |
T |
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| Q |
162 |
aattttcttcccagtttctgatcagttacccatttttgctctcttcaatttgggggtatct |
222 |
Q |
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| T |
6451464 |
aattttcttcccagtttctgatcagttacccatttttgctctcttcaatttgggggtatct |
6451524 |
T |
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