View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1140_low_46 (Length: 251)

Name: NF1140_low_46
Description: NF1140
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1140_low_46
NF1140_low_46
[»] chr8 (62 HSPs)
chr8 (30-161)||(35643899-35644030)
chr8 (136-251)||(11764013-11764128)
chr8 (59-157)||(26771297-26771395)
chr8 (32-157)||(30251367-30251492)
chr8 (37-151)||(36963272-36963386)
chr8 (35-157)||(43045641-43045763)
chr8 (34-157)||(38648383-38648506)
chr8 (44-157)||(18133688-18133801)
chr8 (51-150)||(28763406-28763506)
chr8 (32-157)||(16825456-16825575)
chr8 (49-150)||(31716157-31716258)
chr8 (33-157)||(35534527-35534651)
chr8 (50-161)||(27028859-27028970)
chr8 (47-157)||(1058005-1058114)
chr8 (32-157)||(10758170-10758295)
chr8 (46-150)||(12976251-12976355)
chr8 (31-143)||(40981150-40981262)
chr8 (31-110)||(43717846-43717925)
chr8 (38-156)||(44792691-44792807)
chr8 (60-153)||(1930071-1930164)
chr8 (32-156)||(27492970-27493094)
chr8 (33-105)||(38602411-38602483)
chr8 (43-137)||(6525869-6525963)
chr8 (45-155)||(32840912-32841022)
chr8 (43-133)||(40859707-40859796)
chr8 (38-107)||(9130238-9130307)
chr8 (50-162)||(35749501-35749613)
chr8 (44-148)||(41589627-41589731)
chr8 (37-157)||(42893408-42893528)
chr8 (45-122)||(11376769-11376847)
chr8 (31-153)||(15180577-15180697)
chr8 (35-157)||(33808335-33808456)
chr8 (91-156)||(8146362-8146427)
chr8 (33-121)||(16162827-16162916)
chr8 (86-157)||(10120788-10120859)
chr8 (32-103)||(12496985-12497056)
chr8 (34-156)||(13958001-13958120)
chr8 (78-157)||(29168016-29168095)
chr8 (32-161)||(9700029-9700158)
chr8 (72-122)||(27754470-27754520)
chr8 (91-153)||(37945632-37945694)
chr8 (50-110)||(29168851-29168912)
chr8 (32-93)||(29818857-29818918)
chr8 (72-140)||(6881976-6882044)
chr8 (85-157)||(9956780-9956852)
chr8 (85-161)||(12851204-12851279)
chr8 (37-156)||(14280339-14280459)
chr8 (44-140)||(29205856-29205952)
chr8 (82-161)||(42215270-42215348)
chr8 (99-161)||(10383913-10383974)
chr8 (120-162)||(11407349-11407391)
chr8 (99-161)||(13459673-13459734)
chr8 (102-156)||(16736117-16736171)
chr8 (73-157)||(16347222-16347307)
chr8 (32-105)||(18591889-18591962)
chr8 (38-110)||(34849182-34849255)
chr8 (59-136)||(42043295-42043372)
chr8 (80-156)||(12782146-12782222)
chr8 (84-136)||(14365187-14365239)
chr8 (31-154)||(43368612-43368735)
chr8 (32-72)||(43504868-43504908)
chr8 (34-110)||(44843366-44843442)
[»] chr4 (76 HSPs)
chr4 (35-157)||(54426075-54426197)
chr4 (32-161)||(24169291-24169420)
chr4 (33-156)||(21731570-21731693)
chr4 (43-154)||(15173227-15173338)
chr4 (38-157)||(39603090-39603208)
chr4 (34-157)||(55302281-55302404)
chr4 (55-156)||(50681025-50681126)
chr4 (37-157)||(13126494-13126614)
chr4 (34-157)||(17822780-17822903)
chr4 (33-157)||(25904137-25904261)
chr4 (37-156)||(1374494-1374613)
chr4 (38-157)||(44862903-44863022)
chr4 (32-157)||(55414326-55414458)
chr4 (35-156)||(29388647-29388768)
chr4 (45-157)||(22030235-22030347)
chr4 (34-157)||(26780-26902)
chr4 (38-152)||(41336797-41336911)
chr4 (45-149)||(49939877-49939981)
chr4 (61-153)||(50662680-50662772)
chr4 (30-153)||(35571542-35571665)
chr4 (61-159)||(1706652-1706750)
chr4 (95-164)||(7839337-7839406)
chr4 (72-157)||(56249556-56249640)
chr4 (61-157)||(2244083-2244179)
chr4 (31-151)||(25571298-25571417)
chr4 (31-122)||(52172791-52172883)
chr4 (36-150)||(40830947-40831061)
chr4 (78-157)||(46588032-46588111)
chr4 (34-157)||(53294029-53294152)
chr4 (62-157)||(403537-403634)
chr4 (32-94)||(18815118-18815180)
chr4 (43-157)||(23459660-23459773)
chr4 (32-134)||(42403936-42404037)
chr4 (32-98)||(44797971-44798037)
chr4 (33-153)||(27329990-27330110)
chr4 (37-116)||(8705014-8705093)
chr4 (91-150)||(17223009-17223067)
chr4 (32-119)||(27043743-27043830)
chr4 (51-110)||(40174636-40174695)
chr4 (50-156)||(29657417-29657523)
chr4 (78-155)||(43505968-43506046)
chr4 (64-154)||(49202680-49202770)
chr4 (63-147)||(3069917-3070002)
chr4 (88-157)||(46592178-46592247)
chr4 (38-110)||(437083-437155)
chr4 (72-156)||(21523591-21523674)
chr4 (34-94)||(39691064-39691124)
chr4 (44-156)||(49003800-49003912)
chr4 (32-110)||(23319932-23320008)
chr4 (49-112)||(49003972-49004035)
chr4 (83-161)||(2996601-2996678)
chr4 (43-157)||(52315121-52315235)
chr4 (87-157)||(55064867-55064937)
chr4 (36-110)||(55437155-55437229)
chr4 (37-110)||(49940085-49940158)
chr4 (80-161)||(50742798-50742878)
chr4 (50-122)||(22662077-22662149)
chr4 (50-122)||(22666556-22666628)
chr4 (78-153)||(29774276-29774351)
chr4 (83-159)||(42461281-42461356)
chr4 (80-156)||(48719353-48719428)
chr4 (72-164)||(54069370-54069462)
chr4 (50-157)||(29912980-29913086)
chr4 (43-156)||(1407989-1408103)
chr4 (31-222)||(7367966-7368159)
chr4 (58-136)||(25903858-25903935)
chr4 (79-157)||(26590330-26590408)
chr4 (61-161)||(6987683-6987783)
chr4 (115-148)||(13216207-13216240)
chr4 (79-164)||(28300260-28300344)
chr4 (71-156)||(30668320-30668403)
chr4 (35-76)||(38478825-38478866)
chr4 (73-157)||(25332807-25332891)
chr4 (32-76)||(29126176-29126220)
chr4 (115-163)||(41512677-41512725)
chr4 (129-161)||(52259659-52259691)
[»] chr1 (96 HSPs)
chr1 (34-153)||(2295132-2295251)
chr1 (34-153)||(14576569-14576688)
chr1 (35-157)||(473196-473317)
chr1 (48-157)||(29904783-29904892)
chr1 (44-157)||(49938779-49938892)
chr1 (37-157)||(3233933-3234053)
chr1 (43-153)||(42575393-42575503)
chr1 (31-154)||(27976639-27976759)
chr1 (54-157)||(37517101-37517204)
chr1 (34-157)||(37631474-37631597)
chr1 (82-157)||(41184613-41184688)
chr1 (43-153)||(13810034-13810144)
chr1 (33-150)||(33186344-33186462)
chr1 (43-155)||(5720959-5721071)
chr1 (68-157)||(27970243-27970332)
chr1 (31-157)||(37473435-37473565)
chr1 (34-154)||(43230687-43230805)
chr1 (31-119)||(38247397-38247485)
chr1 (81-157)||(51929501-51929577)
chr1 (78-153)||(24915010-24915085)
chr1 (43-157)||(41195120-41195231)
chr1 (43-133)||(1432571-1432661)
chr1 (45-155)||(11941296-11941406)
chr1 (33-107)||(14385707-14385781)
chr1 (32-157)||(3887545-3887670)
chr1 (32-157)||(15477597-15477710)
chr1 (31-157)||(36872764-36872886)
chr1 (58-154)||(38018303-38018399)
chr1 (43-157)||(5741638-5741752)
chr1 (47-161)||(31517668-31517782)
chr1 (50-157)||(36514607-36514714)
chr1 (38-153)||(37617384-37617498)
chr1 (43-157)||(2777924-2778037)
chr1 (50-140)||(6557021-6557111)
chr1 (32-161)||(10199321-10199450)
chr1 (38-164)||(27146174-27146300)
chr1 (32-110)||(34795359-34795437)
chr1 (32-122)||(39976123-39976213)
chr1 (38-141)||(50644174-50644279)
chr1 (59-133)||(52863291-52863365)
chr1 (50-107)||(33204325-33204382)
chr1 (32-121)||(38001663-38001752)
chr1 (83-220)||(44422668-44422804)
chr1 (37-157)||(7941638-7941758)
chr1 (50-169)||(37593615-37593734)
chr1 (91-155)||(40977375-40977439)
chr1 (32-122)||(2295257-2295348)
chr1 (86-153)||(5709663-5709729)
chr1 (59-153)||(17830186-17830278)
chr1 (99-145)||(30286499-30286545)
chr1 (35-157)||(47498756-47498877)
chr1 (51-144)||(7927911-7928004)
chr1 (84-153)||(17603349-17603418)
chr1 (65-133)||(44931901-44931970)
chr1 (45-157)||(1510236-1510348)
chr1 (32-164)||(37842269-37842400)
chr1 (35-110)||(9506969-9507044)
chr1 (79-154)||(10666760-10666834)
chr1 (91-157)||(341479-341545)
chr1 (81-159)||(11695891-11695968)
chr1 (78-156)||(27820156-27820233)
chr1 (102-160)||(36872294-36872352)
chr1 (102-160)||(36872455-36872513)
chr1 (60-157)||(38480515-38480613)
chr1 (115-157)||(42174887-42174929)
chr1 (80-161)||(4445736-4445816)
chr1 (36-153)||(14332018-14332134)
chr1 (71-164)||(27145688-27145780)
chr1 (62-107)||(41162993-41163038)
chr1 (185-221)||(781185-781221)
chr1 (51-161)||(35925718-35925829)
chr1 (114-154)||(36872623-36872663)
chr1 (80-164)||(38170652-38170735)
chr1 (86-157)||(4576837-4576907)
chr1 (126-221)||(7218081-7218176)
chr1 (102-164)||(19092368-19092428)
chr1 (121-164)||(33546455-33546498)
chr1 (32-103)||(34952288-34952359)
chr1 (38-120)||(41638227-41638310)
chr1 (73-156)||(45975723-45975806)
chr1 (78-151)||(12287151-12287224)
chr1 (79-161)||(12481531-12481612)
chr1 (79-161)||(37811880-37811961)
chr1 (31-128)||(41505745-41505832)
chr1 (80-122)||(49692014-49692056)
chr1 (50-127)||(10233579-10233656)
chr1 (43-76)||(22416835-22416868)
chr1 (128-161)||(31294530-31294563)
chr1 (94-143)||(44217146-44217195)
chr1 (81-118)||(48536653-48536690)
chr1 (45-122)||(51190905-51190982)
chr1 (65-137)||(7862130-7862202)
chr1 (32-76)||(21002268-21002312)
chr1 (101-161)||(25479609-25479668)
chr1 (80-164)||(34290261-34290344)
chr1 (80-156)||(51695456-51695532)
[»] chr3 (71 HSPs)
chr3 (43-156)||(31365112-31365225)
chr3 (31-157)||(39980761-39980887)
chr3 (43-156)||(31365233-31365346)
chr3 (53-157)||(30443925-30444029)
chr3 (38-157)||(20880508-20880627)
chr3 (35-157)||(13715488-13715610)
chr3 (43-157)||(21367699-21367813)
chr3 (36-161)||(20257563-20257690)
chr3 (43-157)||(18405755-18405869)
chr3 (43-153)||(24085262-24085372)
chr3 (43-157)||(37689262-37689375)
chr3 (86-155)||(944596-944665)
chr3 (78-155)||(26911619-26911696)
chr3 (31-157)||(466225-466351)
chr3 (31-157)||(901956-902081)
chr3 (48-150)||(46778120-46778222)
chr3 (31-150)||(49556897-49557022)
chr3 (45-154)||(26878235-26878344)
chr3 (44-164)||(9832680-9832800)
chr3 (35-110)||(47132397-47132470)
chr3 (54-157)||(3845498-3845600)
chr3 (43-142)||(51929281-51929380)
chr3 (34-204)||(402457-402627)
chr3 (33-138)||(42799880-42799986)
chr3 (35-140)||(22882-22987)
chr3 (43-164)||(584071-584192)
chr3 (40-157)||(39602132-39602248)
chr3 (62-157)||(53789406-53789499)
chr3 (115-157)||(46478721-46478763)
chr3 (33-121)||(44014712-44014801)
chr3 (31-151)||(53762306-53762426)
chr3 (97-157)||(5391911-5391970)
chr3 (78-154)||(26878152-26878228)
chr3 (108-156)||(35394487-35394535)
chr3 (36-164)||(38902091-38902218)
chr3 (45-157)||(46031022-46031134)
chr3 (87-154)||(20170558-20170625)
chr3 (35-94)||(20170630-20170689)
chr3 (50-157)||(34610737-34610844)
chr3 (31-157)||(36630963-36631089)
chr3 (33-96)||(46886606-46886669)
chr3 (50-140)||(24684753-24684843)
chr3 (37-94)||(25447163-25447220)
chr3 (32-80)||(1820045-1820093)
chr3 (80-164)||(20194995-20195077)
chr3 (49-161)||(23807995-23808106)
chr3 (43-110)||(33880481-33880549)
chr3 (81-157)||(43015586-43015662)
chr3 (101-157)||(43062723-43062779)
chr3 (126-161)||(3044266-3044301)
chr3 (106-157)||(4401076-4401127)
chr3 (126-161)||(25925770-25925805)
chr3 (44-139)||(42545323-42545418)
chr3 (35-153)||(42747698-42747817)
chr3 (31-154)||(16072953-16073078)
chr3 (103-157)||(19983807-19983860)
chr3 (32-161)||(21574518-21574649)
chr3 (59-157)||(22203462-22203559)
chr3 (45-134)||(5436127-5436216)
chr3 (102-159)||(25453842-25453899)
chr3 (72-157)||(28240350-28240434)
chr3 (188-229)||(28306118-28306159)
chr3 (62-122)||(40122696-40122757)
chr3 (80-161)||(47513681-47513761)
chr3 (47-91)||(5448542-5448586)
chr3 (128-208)||(22343589-22343669)
chr3 (113-157)||(28795847-28795891)
chr3 (38-157)||(32582776-32582888)
chr3 (117-153)||(35959454-35959490)
chr3 (78-110)||(43046744-43046776)
chr3 (45-153)||(45264292-45264400)
[»] chr5 (72 HSPs)
chr5 (36-157)||(16937800-16937921)
chr5 (33-157)||(10639985-10640109)
chr5 (46-146)||(15015887-15015986)
chr5 (51-157)||(29925873-29925978)
chr5 (33-157)||(42500157-42500279)
chr5 (34-157)||(42100343-42100466)
chr5 (32-153)||(7705911-7706032)
chr5 (43-164)||(9202672-9202793)
chr5 (32-157)||(12857618-12857743)
chr5 (59-140)||(31038333-31038414)
chr5 (59-140)||(31047557-31047638)
chr5 (33-157)||(40426797-40426921)
chr5 (38-142)||(41419366-41419470)
chr5 (32-151)||(12857251-12857370)
chr5 (78-153)||(16457938-16458013)
chr5 (43-157)||(9107122-9107236)
chr5 (32-122)||(12433086-12433176)
chr5 (31-132)||(34102225-34102326)
chr5 (43-155)||(37954720-37954833)
chr5 (32-157)||(43300910-43301035)
chr5 (44-156)||(7985002-7985114)
chr5 (32-155)||(40438867-40438989)
chr5 (45-136)||(3520630-3520721)
chr5 (38-121)||(41534506-41534589)
chr5 (79-157)||(3735118-3735196)
chr5 (31-157)||(25461560-25461685)
chr5 (45-95)||(32372706-32372756)
chr5 (33-141)||(6521125-6521234)
chr5 (34-151)||(15246871-15246988)
chr5 (91-164)||(17258856-17258928)
chr5 (32-157)||(39594839-39594964)
chr5 (50-154)||(7808540-7808644)
chr5 (78-157)||(32009724-32009804)
chr5 (38-157)||(11700195-11700313)
chr5 (50-105)||(12425657-12425712)
chr5 (43-132)||(2973467-2973557)
chr5 (31-157)||(3932588-3932714)
chr5 (76-157)||(35446087-35446167)
chr5 (35-151)||(36797011-36797128)
chr5 (99-151)||(706501-706553)
chr5 (62-162)||(19460330-19460429)
chr5 (29-108)||(34736437-34736516)
chr5 (43-157)||(39105496-39105611)
chr5 (33-145)||(39248143-39248250)
chr5 (38-157)||(42582607-42582726)
chr5 (37-110)||(1773024-1773095)
chr5 (35-133)||(32942650-32942748)
chr5 (60-110)||(41981644-41981694)
chr5 (43-156)||(6096580-6096693)
chr5 (37-157)||(32941503-32941622)
chr5 (34-159)||(41535411-41535536)
chr5 (45-153)||(1464946-1465054)
chr5 (72-156)||(32859673-32859756)
chr5 (72-156)||(32861845-32861928)
chr5 (51-122)||(11064733-11064804)
chr5 (33-108)||(19460240-19460315)
chr5 (128-163)||(35531165-35531200)
chr5 (43-153)||(7674684-7674793)
chr5 (99-157)||(8334603-8334661)
chr5 (43-89)||(22209748-22209794)
chr5 (45-151)||(27298138-27298244)
chr5 (59-120)||(41060000-41060062)
chr5 (99-157)||(42646699-42646757)
chr5 (128-165)||(5284457-5284494)
chr5 (43-76)||(10771812-10771845)
chr5 (59-95)||(4014362-4014398)
chr5 (44-76)||(11714724-11714756)
chr5 (124-156)||(13697764-13697796)
chr5 (50-138)||(29815026-29815114)
chr5 (129-161)||(31688067-31688099)
chr5 (72-156)||(32862629-32862712)
chr5 (85-161)||(36638775-36638850)
[»] chr7 (58 HSPs)
chr7 (36-162)||(19302480-19302606)
chr7 (32-157)||(48470076-48470201)
chr7 (29-157)||(3927920-3928048)
chr7 (43-157)||(420392-420506)
chr7 (38-157)||(11619077-11619196)
chr7 (33-156)||(17944257-17944380)
chr7 (51-157)||(33601342-33601448)
chr7 (60-157)||(19214347-19214444)
chr7 (34-150)||(5947280-5947396)
chr7 (78-157)||(21568454-21568533)
chr7 (59-157)||(19022525-19022623)
chr7 (48-157)||(27863654-27863763)
chr7 (38-154)||(20526481-20526597)
chr7 (59-157)||(33601967-33602065)
chr7 (43-161)||(3836607-3836724)
chr7 (101-157)||(27566676-27566732)
chr7 (53-157)||(34744060-34744164)
chr7 (34-141)||(45593576-45593684)
chr7 (34-129)||(4970707-4970802)
chr7 (45-152)||(34035954-34036061)
chr7 (114-157)||(38138474-38138517)
chr7 (58-164)||(39629898-39630002)
chr7 (51-157)||(21196301-21196406)
chr7 (43-153)||(33678816-33678926)
chr7 (31-156)||(36517612-36517735)
chr7 (32-161)||(25596061-25596189)
chr7 (35-110)||(40687463-40687538)
chr7 (31-142)||(48140250-48140360)
chr7 (73-157)||(3308205-3308290)
chr7 (84-157)||(38499878-38499951)
chr7 (37-110)||(46407312-46407385)
chr7 (51-107)||(18765366-18765422)
chr7 (59-150)||(35056714-35056805)
chr7 (59-157)||(49019900-49019999)
chr7 (31-109)||(18962495-18962573)
chr7 (45-103)||(20234546-20234604)
chr7 (99-157)||(30570911-30570969)
chr7 (71-156)||(44989629-44989715)
chr7 (43-105)||(45338537-45338599)
chr7 (73-122)||(946794-946843)
chr7 (72-157)||(20526882-20526967)
chr7 (38-103)||(22283565-22283630)
chr7 (51-140)||(34464153-34464242)
chr7 (43-110)||(32410618-32410686)
chr7 (29-153)||(33128789-33128911)
chr7 (78-154)||(39967955-39968031)
chr7 (78-133)||(27288003-27288058)
chr7 (32-103)||(39907887-39907958)
chr7 (90-157)||(45790397-45790463)
chr7 (70-105)||(48507813-48507848)
chr7 (43-97)||(9210913-9210967)
chr7 (30-76)||(40252034-40252080)
chr7 (51-129)||(43694500-43694578)
chr7 (83-161)||(48131581-48131658)
chr7 (126-159)||(27708804-27708837)
chr7 (101-161)||(1422917-1422976)
chr7 (117-157)||(18865050-18865090)
chr7 (49-105)||(46280210-46280266)
[»] chr2 (70 HSPs)
chr2 (31-157)||(15305706-15305832)
chr2 (33-157)||(32592618-32592744)
chr2 (38-155)||(15757577-15757694)
chr2 (59-153)||(43279467-43279563)
chr2 (38-157)||(20952387-20952506)
chr2 (31-137)||(30331803-30331909)
chr2 (32-150)||(41812005-41812123)
chr2 (31-164)||(11863926-11864058)
chr2 (31-157)||(26202060-26202186)
chr2 (35-157)||(45229543-45229665)
chr2 (43-157)||(33319740-33319850)
chr2 (44-154)||(36534803-36534913)
chr2 (65-157)||(40682341-40682433)
chr2 (50-157)||(449879-449986)
chr2 (78-157)||(20926535-20926613)
chr2 (31-122)||(42659123-42659214)
chr2 (32-157)||(7928211-7928337)
chr2 (87-157)||(12289829-12289899)
chr2 (32-157)||(4606957-4607082)
chr2 (34-110)||(31744377-31744453)
chr2 (37-156)||(2142687-2142806)
chr2 (59-218)||(18066099-18066258)
chr2 (30-157)||(39659420-39659547)
chr2 (31-157)||(10619132-10619258)
chr2 (101-151)||(11201363-11201413)
chr2 (38-140)||(23974412-23974514)
chr2 (72-164)||(24100952-24101045)
chr2 (34-159)||(38916224-38916349)
chr2 (30-107)||(42868392-42868469)
chr2 (29-161)||(9174843-9174975)
chr2 (38-153)||(12194988-12195104)
chr2 (51-218)||(1625871-1626038)
chr2 (78-157)||(5745744-5745823)
chr2 (30-157)||(13325602-13325729)
chr2 (35-110)||(27317458-27317533)
chr2 (34-129)||(42419853-42419948)
chr2 (36-157)||(26143559-26143678)
chr2 (54-156)||(41851568-41851670)
chr2 (48-157)||(750702-750811)
chr2 (32-97)||(3312169-3312234)
chr2 (83-156)||(23955997-23956069)
chr2 (29-157)||(36125393-36125519)
chr2 (36-120)||(41170678-41170763)
chr2 (34-97)||(15370238-15370302)
chr2 (85-161)||(28677626-28677701)
chr2 (80-156)||(33981155-33981231)
chr2 (46-153)||(12464400-12464507)
chr2 (30-133)||(20933787-20933885)
chr2 (78-157)||(41293122-41293201)
chr2 (43-157)||(31561666-31561780)
chr2 (49-110)||(21828041-21828102)
chr2 (81-153)||(16451154-16451226)
chr2 (61-153)||(19608575-19608667)
chr2 (99-159)||(43570444-43570503)
chr2 (115-157)||(42420219-42420262)
chr2 (80-155)||(43530073-43530147)
chr2 (86-156)||(25800869-25800938)
chr2 (87-157)||(26626905-26626975)
chr2 (101-159)||(41170544-41170601)
chr2 (87-161)||(43529827-43529900)
chr2 (72-157)||(7035520-7035605)
chr2 (80-161)||(12313135-12313215)
chr2 (31-76)||(29936141-29936186)
chr2 (50-110)||(1633431-1633491)
chr2 (61-153)||(10258715-10258807)
chr2 (35-75)||(27237782-27237822)
chr2 (50-110)||(29628673-29628733)
chr2 (184-220)||(37053563-37053599)
chr2 (63-107)||(39073646-39073690)
chr2 (128-164)||(43985234-43985270)
[»] scaffold0221 (1 HSPs)
scaffold0221 (34-157)||(22263-22386)
[»] chr6 (41 HSPs)
chr6 (31-156)||(848022-848146)
chr6 (36-163)||(34430741-34430867)
chr6 (34-153)||(30926556-30926674)
chr6 (31-144)||(21405066-21405179)
chr6 (58-155)||(31813195-31813292)
chr6 (59-156)||(30536543-30536633)
chr6 (81-157)||(2735101-2735177)
chr6 (36-164)||(34882338-34882466)
chr6 (38-137)||(4163205-4163304)
chr6 (38-137)||(4224826-4224925)
chr6 (33-157)||(35070568-35070688)
chr6 (30-140)||(31623599-31623709)
chr6 (38-157)||(9559460-9559580)
chr6 (65-157)||(20368127-20368218)
chr6 (45-154)||(2455026-2455132)
chr6 (58-157)||(9912130-9912229)
chr6 (29-156)||(34404636-34404762)
chr6 (32-161)||(30641773-30641902)
chr6 (38-110)||(10645304-10645376)
chr6 (79-119)||(19376663-19376703)
chr6 (32-92)||(35069525-35069585)
chr6 (121-156)||(6536648-6536683)
chr6 (29-132)||(6538571-6538674)
chr6 (99-150)||(24476641-24476692)
chr6 (114-160)||(14929739-14929785)
chr6 (61-154)||(9559364-9559457)
chr6 (99-156)||(31624123-31624179)
chr6 (105-157)||(9763592-9763644)
chr6 (102-162)||(18076230-18076290)
chr6 (78-157)||(18611104-18611184)
chr6 (61-157)||(19411491-19411587)
chr6 (60-163)||(23063475-23063579)
chr6 (43-139)||(29659996-29660092)
chr6 (105-156)||(34430447-34430498)
chr6 (38-153)||(35099073-35099187)
chr6 (127-161)||(35070475-35070509)
chr6 (80-157)||(769170-769246)
chr6 (108-161)||(6647415-6647467)
chr6 (128-161)||(7148694-7148727)
chr6 (184-220)||(10154190-10154226)
chr6 (60-140)||(24982754-24982834)
[»] scaffold0050 (1 HSPs)
scaffold0050 (31-164)||(58767-58900)
[»] scaffold0528 (1 HSPs)
scaffold0528 (59-140)||(922-1003)
[»] scaffold0057 (2 HSPs)
scaffold0057 (44-107)||(44115-44178)
scaffold0057 (51-135)||(24675-24759)
[»] scaffold0103 (1 HSPs)
scaffold0103 (115-162)||(52004-52051)
[»] scaffold0020 (1 HSPs)
scaffold0020 (33-69)||(159887-159923)


Alignment Details
Target: chr8 (Bit Score: 128; Significance: 3e-66; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 35643899 - 35644030
Alignment:
Q  30 atagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35643899 atagggcctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 35643998  T
Q  130 taagcttttttcaacttattttcataagctct 161  Q
    ||||||||||||||||||||||||||||||||    
T  35643999 taagcttttttcaacttattttcataagctct 35644030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 136 - 251
Target Start/End: Original strand, 11764013 - 11764128
Alignment:
Q  136 tttttcaacttattttcataagctcttcataatacggtatagaaataccttataacttatatgaaaacagtttcagtttattttactatttgttgattga 235  Q
    |||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11764013 tttttcaacttatttttataagcacttcataatacggtatggaaataccttataacttatatgaaaacagtttcagtttattttactatttgttgattga 11764112  T
Q  236 ttactttaatgctttt 251  Q
    |||||| |||||||||    
T  11764113 ttacttgaatgctttt 11764128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 26771395 - 26771297
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||| ||||||| |||||||||||||||||||| |||||||||||| || ||||||||||||||| |||| ||||||||||||||||||||||    
T  26771395 gcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattttcataag 26771297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 30251367 - 30251492
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||| |||||| ||||| || ||||  || ||||||||    
T  30251367 agggcctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcata 30251466  T
Q  132 agcttttttcaacttattttcataag 157  Q
    |||||||| || ||||||||||||||    
T  30251467 agctttttacagcttattttcataag 30251492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 36963272 - 36963386
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| ||||||  |||| || || |||||||||||| ||||||    
T  36963272 ctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgacaattttcaaaagctt 36963371  T
Q  137 ttttcaacttatttt 151  Q
    ||| |||||||||||    
T  36963372 tttacaacttatttt 36963386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 43045641 - 43045763
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    ||||||| ||||||||||||||  ||||||||||| ||||||  ||||||||||||||| ||| | |||||||||| || |||  |||||||| ||||||    
T  43045641 gcctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaataagc 43045740  T
Q  135 ttttttcaacttattttcataag 157  Q
    |||||||||||||||||||||||    
T  43045741 ttttttcaacttattttcataag 43045763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 38648506 - 38648383
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||||||||||||||||||  | |||||||||| ||||| |||||||||||||||||||| | |||||||||| || | |||||| || |||||||    
T  38648506 ggcctgttaggattggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataag 38648407  T
Q  134 cttttttcaacttattttcataag 157  Q
    ||||||| | | || |||||||||    
T  38648406 cttttttaagcgtaatttcataag 38648383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 157
Target Start/End: Complemental strand, 18133801 - 18133688
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaa 143  Q
    |||||||||||||  ||||||||||| | |||| |||||||||||||||||||| | ||| |||||  || |||| |||||||||| ||||||||||||     
T  18133801 gattggcttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcag 18133702  T
Q  144 cttattttcataag 157  Q
    ||||||||||||||    
T  18133701 cttattttcataag 18133688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 150
Target Start/End: Complemental strand, 28763506 - 28763406
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt-ttttcaacttatt 149  Q
    ||||| ||||||||||| |  ||||| |||||||||||||||||||| |||||||||||| || |||| ||||||||||||||||| |||||||||||||    
T  28763506 ttattcgggcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttttcaacttatt 28763407  T
Q  150 t 150  Q
    |    
T  28763406 t 28763406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 16825456 - 16825575
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||| ||| | |||||||||  |||||||||| ||| |  |||||||||||     |||| ||||||||||||||| |||||||||||||||||    
T  16825456 agggcctgtttggactagcttatttgaacttatctactagcacacattttgtgagac-----gggagaacttatgaaaatagcttatgacaattttcata 16825550  T
Q  132 agcttttttcaacttattttcataag 157  Q
    ||| ||||||||||||||||||||||    
T  16825551 agc-tttttcaacttattttcataag 16825575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 49 - 150
Target Start/End: Original strand, 31716157 - 31716258
Alignment:
Q  49 gcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttat 148  Q
    ||||||||| ||||||||| ||||||| ||||| ||||||||||| ||| ||||| |||||| || |||||||| | ||||||||||||||||| |||||    
T  31716157 gcttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacattcttcataagcttttttcagcttat 31716256  T
Q  149 tt 150  Q
    ||    
T  31716257 tt 31716258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 35534527 - 35534651
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    |||||||||  || || |||||||| |||||||||||  ||||| ||||||||||||||||| || ||||| |||||| || ||||||||||||| | ||    
T  35534527 gggcctgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaa 35534626  T
Q  133 gcttttttcaacttattttcataag 157  Q
    |||||||||  |||| |||||||||    
T  35534627 gcttttttcggcttactttcataag 35534651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 27028970 - 27028859
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttatt 149  Q
    |||||||| | ||||| |||||||||| ||| |||||| ||||||||| || || |||||| || ||| |||| |||||||||||| |||||| ||||||    
T  27028970 cttatttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagcttaggacatttttcataagctattttcagcttatt 27028871  T
Q  150 ttcataagctct 161  Q
    ||||||||||||    
T  27028870 ttcataagctct 27028859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 157
Target Start/End: Original strand, 1058005 - 1058114
Alignment:
Q  47 tggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaactt 146  Q
    ||||||||||| |||||||||||  ||||| |||||||||||||||||||| ||||| ||||||  | |||||||| ||||||| || |||||||  |||    
T  1058005 tggcttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacatttttcattag-ttttttccgctt 1058103  T
Q  147 attttcataag 157  Q
    |||||||||||    
T  1058104 attttcataag 1058114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 10758170 - 10758295
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    ||||| |||| | |||| ||||||||  ||||||| ||  ||||| |||||||||||||||||  | || ||||||||| || ||||||||||||||| |    
T  10758170 agggcatgtttgaattgacttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaa 10758269  T
Q  132 agcttttttcaacttattttcataag 157  Q
    ||||||||||| ||| ||||||||||    
T  10758270 agcttttttcagcttgttttcataag 10758295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 150
Target Start/End: Complemental strand, 12976355 - 12976251
Alignment:
Q  46 ttggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaact 145  Q
    |||||||||||| ||||||||||| ||||||  ||||||||||||||| | | ||||||||| || || || | |||||||||| |||||||||||| ||    
T  12976355 ttggcttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagcttctaacaattttcaaaagcttttttcagct 12976256  T
Q  146 tattt 150  Q
    |||||    
T  12976255 tattt 12976251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 40981262 - 40981150
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||| |||  |||||||||||||||||||||||||||| |||  ||||| ||| |||||||||| ||| | |||||| |  |||||||| |||||||    
T  40981262 tagggcccgtttagattggcttatttgggcttatctactggtatatgttttgcgaggctgtttgggagaacatttgaaaacaacttatgacatttttcat 40981163  T
Q  131 aagcttttttcaa 143  Q
    |||||||| ||||    
T  40981162 aagcttttctcaa 40981150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 43717846 - 43717925
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||| || ||||||||||||||| ||||||||| || ||||| |||||||||||| ||||||| ||||||||||||    
T  43717846 tagggcctatttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaa 43717925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 156
Target Start/End: Complemental strand, 44792807 - 44792691
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| ||||||||||||||| ||||||||||||| |||| || ||||||||||||| ||| ||||||  | || |  ||||| |||||||||||||  ||    
T  44792807 tgtttggattggcttatttgagcttatctactgggataaattatgtgagactgttttggagaacttagaacaacaacttatggcaattttcataag--tt 44792710  T
Q  138 tttcaacttattttcataa 156  Q
    |||||||| ||||||||||    
T  44792709 tttcaactcattttcataa 44792691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 1930164 - 1930071
Alignment:
Q  60 cttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    ||||||||||| ||||| |||||||| | | ||||||| ||||| |||||| ||||||||||| | |||||||||| |||||| ||||||||||    
T  1930164 cttatctactgacataagttttgtgacattatttgggagaacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttca 1930071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 156
Target Start/End: Complemental strand, 27493094 - 27492970
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||| |||||  |||||||| |||||||| |||| |||| |||||| | | | ||||||| | |||||||||| |  || ||||| | ||||||    
T  27493094 agggcctgtttggattaacttatttgagcttatctgctggtataagttttgtcatattatttgggagagcttatgaaaacaagttgtgacattgttcata 27492995  T
Q  132 agcttttttcaacttattttcataa 156  Q
    |||| ||||||||||||||||||||    
T  27492994 agctattttcaacttattttcataa 27492970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 105
Target Start/End: Complemental strand, 38602483 - 38602411
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttat 105  Q
    ||||||||| |||||| |||||||| |||||||||||| ||||| ||||||||| |||||||||| |||||||    
T  38602483 gggcctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaacttat 38602411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 137
Target Start/End: Complemental strand, 6525963 - 6525869
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||||| |||||||| | |||||||||  ||||| ||||||| |||||||||||| |||||||||  |  |||||||||||||||||||| ||||    
T  6525963 ggattgtcttatttgagtttatctactaacataagttttgtgtgactgtttgggaaaacttatgatgactgtttatgacaattttcataaacttt 6525869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 32840912 - 32841022
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    |||| |||| ||| |||||||||||  || || ||||| |||||||||||||| |||||||||||| |  |||||||| | |||||||| | |||||| |    
T  32840912 attgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacattgttcataagttgttttcagc 32841011  T
Q  145 ttattttcata 155  Q
    |||||||||||    
T  32841012 ttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 133
Target Start/End: Original strand, 40859707 - 40859796
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    ||||||||||||||| |||||||| ||  ||||| ||||||||| |||||| |||  ||||||||||| || |||||||||||||||||||    
T  40859707 ggattggcttatttgagcttatctgctaacataagttttgtgaggctgttttgga-gacttatgaaaacagcttatgacaattttcataag 40859796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 9130238 - 9130307
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatga 107  Q
    |||| ||||| ||||||||| |||||||||||||||||| |||||||||||| ||||||| | |||||||    
T  9130238 tgtttggattagcttatttgagcttatctactggcataagttttgtgagactatttgggacaccttatga 9130307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 35749501 - 35749613
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttatt 149  Q
    |||| ||| ||||||||| || ||||| ||||| ||| ||||||| || |||||||||||| || || |  || ||||||||| ||||||||||| ||||    
T  35749501 cttaattgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtagcatttttcataaacttttttcaacatatt 35749600  T
Q  150 ttcataagctctt 162  Q
    |||||||| ||||    
T  35749601 ttcataagttctt 35749613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 148
Target Start/End: Complemental strand, 41589731 - 41589627
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaa 143  Q
    |||||| ||||||| |||| ||||||| |||||  ||| ||||||||||| ||| |||||||||||| |  |||| |||||||||| |||||| ||| ||    
T  41589731 gattggtttatttgagcttgtctactgacataagctttttgagactgttttggagaacttatgaaaacaacttataacaattttcaaaagcttatttgaa 41589632  T
Q  144 cttat 148  Q
    |||||    
T  41589631 cttat 41589627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 157
Target Start/End: Original strand, 42893408 - 42893528
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||| |||||  |||||||| | |||||||| |||||||||||||||  | ||||||||| ||||||| |||| || ||||||     || ||||||||    
T  42893408 ctgtttggattaacttatttgagtttatctaccggcataatttttgtgctagtgtttgggagaacttataaaaacagcttatgatgcgcttaataagctt 42893507  T
Q  137 ttttcaacttattttcataag 157  Q
    |||||| ||||||||||||||    
T  42893508 ttttcagcttattttcataag 42893528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 11376847 - 11376769
Alignment:
Q  45 attggcttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    ||||||||||||| ||||||||||||  |||| || |||||||||| ||||||| ||||||||||||||| || |||||    
T  11376847 attggcttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgaca 11376769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 153
Target Start/End: Complemental strand, 15180697 - 15180577
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    |||| |||||| ||||||||||||||| | |||||||||| ||||| |||| ||||||| ||| ||| || || |||||| || || |||||||||||      
T  15180697 taggacctgtttggattggcttatttgagtttatctactgccataagttttatgagact-ttttggagaatttctgaaaacaggttttgacaattttc-c 15180600  T
Q  131 aagcttttttcaacttattttca 153  Q
    ||| |||||| ||||||||||||    
T  15180599 aagtttttttaaacttattttca 15180577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 33808456 - 33808335
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    ||||||| |||||| |||||| | |||||| || |||| ||| |||| || || ||||||||| ||||||||||||||| |||||| | | ||||||||     
T  33808456 gcctgtttggattgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatgatattgttcataagt 33808358  T
Q  135 ttttttcaacttattttcataag 157  Q
    | |||| | ||||||||||||||    
T  33808357 tgtttttagcttattttcataag 33808335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 91 - 156
Target Start/End: Complemental strand, 8146427 - 8146362
Alignment:
Q  91 tttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    ||||||| |||||||||||| ||||||||||| |||||||||| ||||| || |||| ||||||||    
T  8146427 tttgggagaacttatgaaaacagtttatgacacttttcataagttttttccagcttaatttcataa 8146362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 16162916 - 16162827
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatgac 121  Q
    ||||||||| ||||||||||||||| | ||||||||| ||||||    ||||||||||||||| || |||||||||||| || |||||||    
T  16162916 gggcctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgac 16162827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 10120859 - 10120788
Alignment:
Q  86 gactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||| || |||||||||||| || |||||||| || ||||| ||| |||||| ||||||||||||||    
T  10120859 gactgtttgagagaacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataag 10120788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 12496985 - 12497056
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataactt 103  Q
    ||||||| || ||||||  ||||||| |||||||| ||||||||| ||||||||||||||||| || |||||    
T  12496985 agggcctatttggattgatttatttgagcttatctcctggcataagttttgtgagactgtttgagagaactt 12497056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 13958001 - 13958120
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| ||||||||||| ||| | ||||||| |||||||| |||  ||||  ||||||||| ||||| |||||| |  ||||||| |||||||||||    
T  13958001 ggcctgtttggattggcttacttgagtttatctattggcataagttt--tgaggttgtttgggagaacttttgaaaacaaattatgac-attttcataag 13958097  T
Q  134 cttttttcaacttattttcataa 156  Q
    |||||| ||  |||| |||||||    
T  13958098 ctttttccagtttatattcataa 13958120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 29168016 - 29168095
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||||||||||| ||||||| |||| || |||||||| |||||||||   ||| ||| ||||||| ||||||    
T  29168016 ttttgtgagactgtttgggagaacttataaaaacagattatgacatttttcataaatgtttctcagcttatttccataag 29168095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 9700158 - 9700029
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    |||||||||| |||||  |||||||| ||||||||||| ||||||    |||||||||| |||| || | ||| |||||  | ||||||||| | | |||    
T  9700158 agggcctgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgaca-tgtccat 9700060  T
Q  131 aagcttttttcaacttattttcataagctct 161  Q
    ||||| |||||| ||||||||||||||||||    
T  9700059 aagctgttttcaccttattttcataagctct 9700029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 27754520 - 27754470
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    ||||| |||||||||||| ||||||| |||||||||||| |||||||||||    
T  27754520 cataagttttgtgagactatttgggagaacttatgaaaacagtttatgaca 27754470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 37945694 - 37945632
Alignment:
Q  91 tttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    ||||||| ||||| |||||| || |||||||||||| ||||||| ||||| ||||||||||||    
T  37945694 tttgggagaacttctgaaaacagcttatgacaatttccataagcattttttaacttattttca 37945632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 29168851 - 29168912
Alignment:
Q  50 cttatttgggcttatct-actggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||| |||||||| ||||  |||| |||||||||||||||||||||||||||| ||||    
T  29168851 cttatttgagcttatcttactgatataagttttgtgagactgtttgggataacttataaaaa 29168912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 29818857 - 29818918
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgttt 93  Q
    ||||| |||| |||||||| |||||| |||||||||||  ||||| ||||||||||||||||    
T  29818857 agggcatgtttggattggcatatttgagcttatctactatcataagttttgtgagactgttt 29818918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 140
Target Start/End: Complemental strand, 6882044 - 6881976
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttttt 140  Q
    ||||| |||||||||||||||||||| ||| |||||||| || | |||| |||||| | ||||||||||    
T  6882044 cataagttttgtgagactgtttgggagaacctatgaaaacagctcatgataattttaacaagctttttt 6881976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 9956780 - 9956852
Alignment:
Q  85 agactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||| ||||| || ||||||||||||||||||||| || | ||||||||   |||||| ||||||||||||||    
T  9956780 agaccgtttgagagaacttatgaaaatagtttatggcattgttcataagtagttttcagcttattttcataag 9956852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 12851279 - 12851204
Alignment:
Q  85 agactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||||||| |||||||||||| || |||| || || |||||||| | |||||  ||||||||||||||||||    
T  12851279 agactgtttgggaaaacttatgaaaacagcttataac-atgttcataagatgttttcggcttattttcataagctct 12851204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 14280339 - 14280459
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataa-tttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    ||||| |||||| ||||||||   |||||||||||||||| |||||||| || ||||||||  || ||||||||| | ||||||||| | ||| |||||     
T  14280339 ctgtttggattgacttatttgattttatctactggcataagtttttgtgtgattgtttgggtgaatttatgaaaacaatttatgacattgttcgtaagcc 14280438  T
Q  136 tttttcaacttattttcataa 156  Q
     |||| | |||||||| ||||    
T  14280439 gtttttagcttatttttataa 14280459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 29205952 - 29205856
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttttt 140  Q
    |||||||| ||||| |||||| |||  |||||| || ||||| ||||| || || ||||||| |||| ||  ||||||| |||||||||||||||||    
T  29205952 gattggctaatttgagcttatgtacatgcataagttctgtgatactgtctgagagaacttattaaaacagcgtatgacatttttcataagctttttt 29205856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 42215270 - 42215348
Alignment:
Q  82 gtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    |||| ||||||||||| |||| ||||||| || |||||||  | |||||||||| |||||| ||||||| ||||||||||    
T  42215270 gtgacactgtttgggagaactaatgaaaacagcttatgac-ttgttcataagctgttttcagcttatttacataagctct 42215348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 10383974 - 10383913
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    |||||||||||| || |||||||| |||||||||||| ||| || ||||||| ||||||||||    
T  10383974 aacttatgaaaacagcttatgaca-ttttcataagctgtttacagcttatttccataagctct 10383913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 11407349 - 11407391
Alignment:
Q  120 acaattttcataagcttttttcaacttattttcataagctctt 162  Q
    |||||||||| ||||||||||||||||||||| ||||| ||||    
T  11407349 acaattttcacaagcttttttcaacttatttttataagttctt 11407391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 13459734 - 13459673
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    |||||||||||| || |||||||| ||||||||| || |||||| | ||||||||||||||||    
T  13459734 aacttatgaaaacagcttatgaca-ttttcataaactgttttcagcctattttcataagctct 13459673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 16736171 - 16736117
Alignment:
Q  102 ttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    ||||||||| | ||||||||||| || |||||||| |||||| ||||||||||||    
T  16736171 ttatgaaaacaatttatgacaatatttataagcttctttcaagttattttcataa 16736117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 16347307 - 16347222
Alignment:
Q  73 ataatttttgtgagactgtttgggataacttatgaaaata-gtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||| |||||||||||||||||||    |||||||||| | ||| |||||| |||||||||||||| |||| |||| | |||||||    
T  16347307 ataagttttgtgagactgtttgggtggccttatgaaaacaagttaatgacacttttcataagctttattcagcttaatatcataag 16347222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 18591889 - 18591962
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttat 105  Q
    |||| ||||| | ||||| ||| ||| ||||||||| ||| |||| |||| ||||||||||||||| |||||||    
T  18591889 agggtctgtttgaattggtttaattgagcttatctattggtataagttttatgagactgtttgggagaacttat 18591962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 34849255 - 34849182
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataa-tttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||| ||||| ||||||||| ||||| |||||||||||| |  || ||||||||||||||| |||| |||||||    
T  34849255 tgttcggattagcttatttgagcttagctactggcataagtacttttgagactgtttgggagaactaatgaaaa 34849182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 42043295 - 42043372
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    |||||| ||||| ||||| |||| |||||||||| |||| ||| |||| ||| || |||||| | |||||||||||||    
T  42043295 gcttatttactgtcataagttttatgagactgttcgggagaacatatggaaacagcttatgatatttttcataagctt 42043372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 12782146 - 12782222
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||||||| ||| | | |||||||||||||||  ||||||| | |||||||||| |||||| || | ||||||||    
T  12782146 ttgtgagactattttgaagaacttatgaaaataggctatgacattgttcataagctcttttcagctaagtttcataa 12782222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 136
Target Start/End: Original strand, 14365187 - 14365239
Alignment:
Q  84 gagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||||||||||||||| ||||  ||| || |||||||| |||||||||||||    
T  14365187 gagactgtttgggataatttatagaaacagcttatgacatttttcataagctt 14365239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 154
Target Start/End: Original strand, 43368612 - 43368735
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatt-tttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    |||| |||||| |||||| ||||||||  ||||||||||  |||||   |||||||||||| |||  | | |||||||||| |  |||||||| | ||||    
T  43368612 taggacctgtttggattgacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatgaca-tgttca 43368710  T
Q  130 taagcttttttcaacttattttcat 154  Q
    | |||| ||||||||||||||||||    
T  43368711 ttagctattttcaacttattttcat 43368735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 43504908 - 43504868
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggc 72  Q
    ||||||| |||||||||||||||||  ||||||||||||||    
T  43504908 agggcctattaggattggcttatttaagcttatctactggc 43504868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 44843442 - 44843366
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||| |||||| |||||| | | ||||| ||| |||||| ||||||||||||  ||||||||| | |||||||    
T  44843442 ggcctgtttggattgacttattggagtttatccacttgcataagttttgtgagacttattgggataagtaatgaaaa 44843366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 87; Significance: 8e-42; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 54426197 - 54426075
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| |||||| ||||| || ||||||||||||||||||||    
T  54426197 gcctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagc 54426098  T
Q  135 ttttttcaacttattttcataag 157  Q
    ||||||||| |||||||||||||    
T  54426097 ttttttcaagttattttcataag 54426075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 24169420 - 24169291
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    ||||| |||| ||||||||||||| | | |||||||||||||||| |||||||||||| |||| || ||||| | ||||||| |||||||| ||||||||    
T  24169420 agggcttgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcata 24169321  T
Q  132 agcttttttcaacttattttcataagctct 161  Q
    || |||||||||||||||||||||||||||    
T  24169320 agattttttcaacttattttcataagctct 24169291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 21731570 - 21731693
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    ||||||||| ||||||| ||||||| || ||||||||| ||||| |||||||||| ||||||||| |||||||||||| || |||| |||||||||||||    
T  21731570 gggcctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataa 21731669  T
Q  133 gcttttttcaacttattttcataa 156  Q
     |||||||||||||| ||||||||    
T  21731670 acttttttcaacttactttcataa 21731693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 15173227 - 15173338
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||| ||||||||  ||||||||||| ||||| |||||||||||||||||||| |  |||||||||||| ||||||||||||||||||| ||||||||    
T  15173227 ggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttcataagtttttttca 15173326  T
Q  143 acttattttcat 154  Q
    | | ||||||||    
T  15173327 aatgattttcat 15173338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 39603090 - 39603208
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| ||||||||||||||| |||| |||| ||| |||| |||||||||||||||||||| |||||| ||||| || ||||||||||||| |||||||||    
T  39603090 tgtttggattggcttatttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagcttt 39603188  T
Q  138 tttcaacttattttcataag 157  Q
    ||| || |||||||||||||    
T  39603189 ttttaagttattttcataag 39603208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 55302404 - 55302281
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||||||||| ||||||||  ||||||||| |||||||| ||||||||| |||||  ||| |||||||  ||| || |||||||||||||| ||||    
T  55302404 ggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaag 55302305  T
Q  134 cttttttcaacttattttcataag 157  Q
    ||||||||| ||||||||||||||    
T  55302304 cttttttcagcttattttcataag 55302281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 55 - 156
Target Start/End: Original strand, 50681025 - 50681126
Alignment:
Q  55 ttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcat 154  Q
    ||||| ||| ||||| || ||| ||||||||||||||||| || |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||    
T  50681025 ttgggtttacctactcgcttaagttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcat 50681124  T
Q  155 aa 156  Q
    ||    
T  50681125 aa 50681126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 37 - 157
Target Start/End: Original strand, 13126494 - 13126614
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||| ||||||||||||||  ||||| |||||  ||||| |||||||||||||||||| | ||||||| |||| || |||||||| || ||||||||||    
T  13126494 ctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagctt 13126593  T
Q  137 ttttcaacttattttcataag 157  Q
    |||||| ||||||||||||||    
T  13126594 ttttcagcttattttcataag 13126614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 17822780 - 17822903
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| |||||  |||||||| |||||||||||| ||||| || ||||||||| ||| ||| ||| |||||||| || |||||||| ||||||||||    
T  17822780 ggcctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataag 17822879  T
Q  134 cttttttcaacttattttcataag 157  Q
    ||||||| | ||||||||||||||    
T  17822880 ctttttttagcttattttcataag 17822903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 25904137 - 25904261
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    |||||||||  | ||| |||||||| ||||||| | || ||||| |||||||||||||||||||| | |||||||||| || ||||| || |||||||||    
T  25904137 gggcctgttttggttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataa 25904236  T
Q  133 gcttttttcaacttattttcataag 157  Q
    |||||||||| |||||||| |||||    
T  25904237 gcttttttcagcttatttttataag 25904261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 156
Target Start/End: Original strand, 1374494 - 1374613
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||||||||||||||| ||| ||||||||||| |||||| ||||||||  |||||||||| ||  |||||||| |  |||||||||| |||||||  |     
T  1374494 ctgttaggattggcttaattgagcttatctactagcataaattttgtgattctgtttgggagaatatatgaaaacaacttatgacaatattcataaatta 1374593  T
Q  137 ttttcaacttattttcataa 156  Q
    ||||||||||||||||||||    
T  1374594 ttttcaacttattttcataa 1374613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 44862903 - 44863022
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||||| |||||| |||| |||||||||| || |||||||||| ||||||||| || || || ||| |  ||||||| |||||||||||||||    
T  44862903 tgtttggattggcatatttgagcttgtctactggcaaaagttttgtgagattgtttgggagaaattgtgtaaagaaattatgacgattttcataagcttt 44863002  T
Q  138 tttcaacttattttcataag 157  Q
    ||||||||||||| ||||||    
T  44863003 tttcaacttatttgcataag 44863022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 55414326 - 55414458
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaat-------agtttatgacaat 124  Q
    |||||||||| |||||| |||||||| |  ||||||||||||||||||||||||  |||||| ||| || |||||||||        || |||||||| |    
T  55414326 agggcctgtttggattgacttatttgagagtatctactggcataatttttgtgatgctgtttaggagaatttatgaaaagtgaaaacagcttatgacatt 55414425  T
Q  125 tttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||||||||||||||||||||||||    
T  55414426 tttcataagcttttttcaacttattttcataag 55414458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 29388768 - 29388647
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    ||||||| || ||| ||||||||  ||||||||||  ||||| |||||| ||| ||||||||| |||||| ||||  |||||||||||||||| ||| ||    
T  29388768 gcctgtttgggttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaacttacgaaagcagtttatgacaatttttatatgc 29388669  T
Q  135 ttttttcaacttattttcataa 156  Q
    | ||||||||||||||||||||    
T  29388668 tcttttcaacttattttcataa 29388647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 22030347 - 22030235
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    |||| |||||||| |||| |||| | |||||| ||||||||| || ||||||| |||||||||||| || ||||||||||||||| |||||||| |||      
T  22030347 attgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttctcagg 22030248  T
Q  145 ttattttcataag 157  Q
    |||||||||||||    
T  22030247 ttattttcataag 22030235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 26780 - 26902
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||  ||||| |||||||||  || || ||||||||| || ||||||||| ||||| |||    
T  26780 ggcctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaag 26879  T
Q  134 cttttttcaacttattttcataag 157  Q
    | |||||||  |||||||||||||    
T  26880 c-tttttcagattattttcataag 26902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 152
Target Start/End: Complemental strand, 41336911 - 41336797
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| |||||||| | |||||||||  ||||| ||||||||||  ||| || | |||||| ||||| || |||||||| ||||||||||||||    
T  41336911 tgtttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgacagttttcataagcttt 41336812  T
Q  138 tttcaacttattttc 152  Q
    |||||||||||||||    
T  41336811 tttcaacttattttc 41336797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 45 - 149
Target Start/End: Original strand, 49939877 - 49939981
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    ||||||||||||  ||||||||||| ||||||  ||||||||||| ||||| | |||||||||||| || |||||||| | |||||||||| |||||| |    
T  49939877 attggcttatttaagcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttatgacattgttcataagctgttttcagc 49939976  T
Q  145 ttatt 149  Q
    |||||    
T  49939977 ttatt 49939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 50662680 - 50662772
Alignment:
Q  61 ttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    ||||||||  || ||| |||| ||||||| |||  || |||||||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  50662680 ttatctacccgcttaagttttatgagactctttaagagaacttatgaaaacagttaatgacaattttcataagcttttttcaacttattttca 50662772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 153
Target Start/End: Original strand, 35571542 - 35571665
Alignment:
Q  30 atagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    |||||| ||||| ||||||||||||||| ||||||||||| |||||| ||||||| ||  |||||||| ||||| | |||| || |||| ||| | ||||    
T  35571542 atagggtctgtttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttattacactgttca 35571641  T
Q  130 taagcttttttcaacttattttca 153  Q
    | ||||  ||||||||||||||||    
T  35571642 tgagctggtttcaacttattttca 35571665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 159
Target Start/End: Complemental strand, 1706750 - 1706652
Alignment:
Q  61 ttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagct 159  Q
    |||||||||| ||||| ||||||||||| ||||| || || ||||||||| || ||||| || | |||||||||| ||| |||||||||||||||||||    
T  1706750 ttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttatggcattgttcataagctatttccaacttattttcataagct 1706652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 7839337 - 7839406
Alignment:
Q  95 ggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttca 164  Q
    |||||| ||||||||| |  |||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  7839337 ggataatttatgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttca 7839406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 56249640 - 56249556
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||| |||||||||| ||||||| | ||||||| |||| || |||||||| ||||||||||||||||||||||||||||| ||||    
T  56249640 cataagttttgtgagattgtttggaacaacttatcaaaacagcttatgaca-ttttcataagcttttttcaacttattttcttaag 56249556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 2244179 - 2244083
Alignment:
Q  61 ttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||| ||||| |||| ||| ||||||||||| || || | |||| || |||||||||| ||||||| ||||||||| ||||||||||||||    
T  2244179 ttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatgacaatattcataaacttttttcaccttattttcataag 2244083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 151
Target Start/End: Complemental strand, 25571417 - 25571298
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| ||||||||||||||| | |||||||||| ||||| ||   ||| ||||||| ||| |||||||| ||| |||||||||  || |||||    
T  25571417 tagggcctgtttggattggcttatttgagtttatctactgacataagttacatgaaactgtttaggagaacttatggaaacagtttatga-tatgttcat 25571319  T
Q  131 aagcttttttcaacttatttt 151  Q
    ||||| |||||| ||||||||    
T  25571318 aagctgttttcagcttatttt 25571298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 52172883 - 52172791
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatt-tttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    |||||| | |||||||||||||||||| |||||  ||||||||||| | |||||||||||||| |||| |||||||||||| || ||||||||    
T  52172883 tagggcattttaggattggcttatttgagcttacatactggcataagtatttgtgagactgttggggaaaacttatgaaaacagcttatgaca 52172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 40830947 - 40831061
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatga-aaatagtttatgacaattttcataagc 134  Q
    |||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||||| || | || |||||| ||| || ||| ||||| ||| ||||||    
T  40830947 cctgtttggattggctaatttgagcttatctattg-cataagttttgtgagactgttcggaagaaattatgagaaacagcttacgacaacttttataagc 40831045  T
Q  135 ttttttcaacttattt 150  Q
    ||||||||||||||||    
T  40831046 ttttttcaacttattt 40831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 46588032 - 46588111
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||| |||| |||||||| | |||||| |||||||  |||||||||||||||||||| |||| |||||||||||||||||    
T  46588032 ttttttgagcctgtttggtagaacttacgaaaataacttatgacaattttcataagccttttccaacttattttcataag 46588111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 53294029 - 53294152
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| |||||| || ||||| |||||||||||| ||| | |||||| ||||||||||||| |||| ||||||| |  ||||||   |||||| |||    
T  53294029 ggcctgtttggattgactaatttgtgcttatctactgacatgagttttgtaagactgtttgggaaaactcatgaaaacaaattatgatggttttcaaaag 53294128  T
Q  134 cttttttcaacttattttcataag 157  Q
    || |||||| ||| ||||||||||    
T  53294129 ctattttcagcttgttttcataag 53294152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 403634 - 403537
Alignment:
Q  62 tatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt--ttttcaacttattttcataag 157  Q
    ||||||||  ||||| |||||||| ||||||||| | ||||| ||||||||| ||||  ||| ||||||||||||  |||||||||||||||||||||    
T  403634 tatctactaacataagttttgtgaaactgtttggtacaacttttgaaaatagcttattgcaaatttcataagcttttttttcaacttattttcataag 403537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 18815180 - 18815118
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttg 94  Q
    |||||||||| ||||||||||||||| ||||| ||||| |||||| |||||||||||||||||    
T  18815180 agggcctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttg 18815118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 23459773 - 23459660
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||||| |||||| ||||||||||| |||||| | | || ||||||||| ||| |||||||||||| || ||||||| || || ||||| | ||||||    
T  23459773 ggattggcatatttgagcttatctactagcataagtatggtaagactgtttcggagaacttatgaaaaaagcttatgac-atgttaataagttattttca 23459675  T
Q  143 acttattttcataag 157  Q
    |||||| ||||||||    
T  23459674 acttatattcataag 23459660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 42403936 - 42404037
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||| |||||| |||||||| ||||||| |||| ||||| ||||||| | || ||||||| || || |||||| || |||||||||||||||||    
T  42403936 agggcctgtttggattgacttatttgagcttatcaactgacataagttttgtgtg-ctatttgggagaatttctgaaaacagcttatgacaattttcata 42404034  T
Q  132 agc 134  Q
    |||    
T  42404035 agc 42404037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 44798037 - 44797971
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggat 98  Q
    |||||||||| ||||||||| ||||  |||||||||||| ||||| |||||||||||||||||||||    
T  44798037 agggcctgtttggattggctgatttaagcttatctactgacataagttttgtgagactgtttgggat 44797971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 27329990 - 27330110
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    ||||||||| | ||||||||||||  |||||||||||  ||||| |||  ||||| |||||| ||  | ||||||||| |  |||||||||||| |||||    
T  27329990 gggcctgtttgaattggcttatttaagcttatctacttacataagtttaatgagattgtttgagaggatttatgaaaacaacttatgacaatttgcataa 27330089  T
Q  133 gcttttttcaacttattttca 153  Q
     |||||||||| |||||||||    
T  27330090 ccttttttcaaattattttca 27330110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 8705093 - 8705014
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagttt 116  Q
    ||||| ||||||||| ||||| ||||||||| || ||||| ||||||||||||| |||||| ||||||| |||| |||||    
T  8705093 ctgtttggattggctcatttgagcttatctattgacataagttttgtgagactgattgggagaacttataaaaacagttt 8705014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 17223009 - 17223067
Alignment:
Q  91 tttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattt 150  Q
    |||||||||| |||||||||||||||||||| || |||||||||| ||||||||||||||    
T  17223009 tttgggataatttatgaaaatagtttatgac-atgttcataagctgttttcaacttattt 17223067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 27043743 - 27043830
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatg 119  Q
    |||| ||||| |||||| |||||||| |||||||||||| ||||| |||||||| ||||||||| | || ||||| |||||| |||||    
T  27043743 agggtctgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaagttatgcaaatagcttatg 27043830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Complemental strand, 40174695 - 40174636
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    ||||||| | |||||||||  ||||| |||||||||||||||||||||||||||||||||    
T  40174695 ttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaa 40174636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 156
Target Start/End: Complemental strand, 29657523 - 29657417
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttatt 149  Q
    |||||||| ||||||||||   || || |||||||||| || ||| || |||||||||||| || ||||||||||||||| |||| ||||| | |||| |    
T  29657523 cttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatgacaattttcaaaagcatttttgagcttaat 29657424  T
Q  150 ttcataa 156  Q
    |||||||    
T  29657423 ttcataa 29657417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 43506046 - 43505968
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt-ttttcaacttattttcata 155  Q
    ||||||||||||||| ||||  |||  ||||||||| |||||| | ||||||||||||| |||||||||||||||||||    
T  43506046 ttttgtgagactgttagggaggactcgtgaaaatagcttatgagagttttcataagctttttttcaacttattttcata 43505968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 49202770 - 49202680
Alignment:
Q  64 tctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcat 154  Q
    |||||| |||||| |||||||||||||||||| | ||||||| |||  || |||| ||| | |||||||| | ||||||||||||||||||    
T  49202770 tctacttgcataagttttgtgagactgtttggaagaacttataaaaccagattatcacattgttcataagttgttttcaacttattttcat 49202680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 3069917 - 3070002
Alignment:
Q  63 atctactggcataatttttgtgagactgtttgggataacttat-gaaaatagtttatgacaattttcataagcttttttcaactta 147  Q
    |||||||| ||| | |||||||||||||||||||  ||||| | ||||| |  |||||||| ||||||||||||||||||||||||    
T  3069917 atctactgacatgacttttgtgagactgtttgggtgaactttttgaaaacatcttatgacatttttcataagcttttttcaactta 3070002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 46592178 - 46592247
Alignment:
Q  88 ctgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||| | ||||||  ||||||  |||||||||||||||||||| |||| |||||||||||||||||    
T  46592178 ctgtttggaagaacttacaaaaataacttatgacaattttcataagccttttccaacttattttcataag 46592247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 437083 - 437155
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||| ||||||| ||||||| || |||||| | |||||| |||||||||||| ||||||| ||||||||||||    
T  437083 tgtttggattggtttatttgagcatatctagtagcataacttttgtgagactatttgggaaaacttatgaaaa 437155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 21523674 - 21523591
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    ||||| |||||||| ||||||||| | || ||||||||| |  |||||||| |||||||||||| |||||| |||||||||||||    
T  21523674 cataaattttgtgacactgtttggaagaatttatgaaaacaacttatgacatttttcataagct-ttttcagcttattttcataa 21523591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 39691064 - 39691124
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttg 94  Q
    |||||||| | |||| |||||||| ||||||||||| |||||| |||||||||||||||||    
T  39691064 ggcctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttg 39691124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 156
Target Start/End: Original strand, 49003800 - 49003912
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaa 143  Q
    ||||| |||||||| ||||||| |||| | ||| |||||||| || |||||||| ||  |||||||| ||  ||||||| | |||||||||||||| ||     
T  49003800 gattgacttatttgagcttatccactgacgtaagttttgtgaaacggtttgggagaaaatatgaaaagagcgtatgacattgttcataagctttttccag 49003899  T
Q  144 cttattttcataa 156  Q
    |||| ||||||||    
T  49003900 cttaatttcataa 49003912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 23320008 - 23319932
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||||| ||||||||||||||| | ||||||||| |||||  |||  ||||||||||||||| || |||||||||    
T  23320008 agggcctgtttggattggcttatttgagattatctactagcatacattt--tgagactgtttgggagaagttatgaaaa 23319932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 49 - 112
Target Start/End: Original strand, 49003972 - 49004035
Alignment:
Q  49 gcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaata 112  Q
    ||||||||| ||||||||||| || ||| |||||||||||| |||| || ||||||||||||||    
T  49003972 gcttatttgagcttatctactagcttaagttttgtgagactatttgagagaacttatgaaaata 49004035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 2996678 - 2996601
Alignment:
Q  83 tgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    |||||||||||| || | |||||||||| |  |||||||| | | |||||||||||||||||||||||||||| |||||    
T  2996678 tgagactgtttgagagagcttatgaaaacaacttatgaca-tgtccataagcttttttcaacttattttcatacgctct 2996601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 52315121 - 52315235
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||| |||||||| | |||||||||| | ||| |||||||||| ||||||| | ||||||| |||| |  |||| ||| | |||||||| |  |||||    
T  52315121 ggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacattattcataagttgctttca 52315220  T
Q  143 acttattttcataag 157  Q
     ||||||||||||||    
T  52315221 gcttattttcataag 52315235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 55064937 - 55064867
Alignment:
Q  87 actgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||||| ||||| |||||| |  |||||||| ||||||  ||||||||||| ||||||||||||||    
T  55064937 actgtttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataag 55064867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 55437229 - 55437155
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||| ||||||||||||||| | |||||||||| ||||| |||||||| | ||||||  | ||||||||||||    
T  55437229 cctgtttggattggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaa 55437155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 49940085 - 49940158
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    ||||| |||||| |||||||| ||||| || ||  ||||| ||||||||||||||||| || ||||||||||||    
T  49940085 ctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaa 49940158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 50742798 - 50742878
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    |||| |||||||||| || |||||||||||| |||| ||||| || ||||||  || ||||||||| |||||||||||||||    
T  50742798 ttgttagactgtttgagagaacttatgaaaacagttcatgac-atgttcataccctgttttcaactcattttcataagctct 50742878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 22662149 - 22662077
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    ||||| || |||||||||||| | ||| ||| |||||||||||||||  |||||||||||  |||||||||||    
T  22662149 cttatctgagcttatctactgacgtaagtttagtgagactgtttgggggaacttatgaaatcagtttatgaca 22662077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 22666628 - 22666556
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    ||||| || |||||||||||| | ||| ||| |||||||||||||||  |||||||||||  |||||||||||    
T  22666628 cttatctgagcttatctactgacgtaagtttagtgagactgtttgggggaacttatgaaatcagtttatgaca 22666556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 29774351 - 29774276
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgaca-attttcataagcttttttcaacttattttca 153  Q
    |||||||||||||||| ||| ||||||||||||||| ||||| ||  |||||||||| |||||| | ||||||||||    
T  29774351 ttttgtgagactgtttaggagaacttatgaaaatagcttatgtcattttttcataag-tttttttagcttattttca 29774276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 159
Target Start/End: Complemental strand, 42461356 - 42461281
Alignment:
Q  83 tgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagct 159  Q
    ||||||||||||||| |||||||||||||||  ||||||  | |||||||| |  ||||| ||||||||||||||||    
T  42461356 tgagactgtttgggagaacttatgaaaatagcctatgac-gtgttcataagttgatttcagcttattttcataagct 42461281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 48719353 - 48719428
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||||| |||||| |  ||||||||||||| ||||||||| || ||| |||||| |||||| |||||||||||||    
T  48719353 ttgtgagattgtttgagggaacttatgaaaatggtttatgac-atgttcgtaagctgttttcagcttattttcataa 48719428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 164
Target Start/End: Original strand, 54069370 - 54069462
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttca 164  Q
    ||||| ||||||| |||||||||| |  | || |||||| || |||  |||||||||||||||| |||| |||||||||||||| | ||||||    
T  54069370 cataagttttgtgggactgtttggtaggatttttgaaaacagcttacaacaattttcataagctgtttttaacttattttcatatgttcttca 54069462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 29913086 - 29912980
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttatt 149  Q
    |||||||| |||||| | | | ||||| ||||| || ||||||||||| ||||||||||||||| || ||||| ||||| | || | |||||| ||||||    
T  29913086 cttatttgagcttatatgcagccataagttttgcgaaactgtttgggagaacttatgaaaatagctt-tgacatttttccttagttcttttcagcttatt 29912988  T
Q  150 ttcataag 157  Q
    || |||||    
T  29912987 tttataag 29912980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 1408103 - 1407989
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct-tttttc 141  Q
    ||||||||||||||| ||||||||||   || || |||||||||||  ||||  | | |||  ||||| || |||||||| |||||||||||| ||||||    
T  1408103 ggattggcttatttgagcttatctacatacacaagttttgtgagacgatttgatagagcttgagaaaacagcttatgacatttttcataagctgtttttc 1408004  T
Q  142 aacttattttcataa 156  Q
    | ||||| |||||||    
T  1408003 agcttatcttcataa 1407989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 222
Target Start/End: Original strand, 7367966 - 7368159
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    ||||| ||||| |||||| |||||||| | |||||||| |||||||    |||||||||||||||||| | || ||||||| || ||||||| || || |    
T  7367966 tagggtctgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgac-atgttta 7368064  T
Q  130 taagcttttttcaactta-ttttcataagctcttcataatacggtatagaaataccttataa-cttatatgaaaacagtttcagtttattttact 222  Q
    ||||||  ||||||| || ||||  ||||||||  | ||||   ||| |||| | ||||||| |||||||||||||| ||| | |||||||||||    
T  7368065 taagctgctttcaacatattttttgtaagctctctagaatagcttatggaaacaacttataagcttatatgaaaacaatttgactttattttact 7368159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Complemental strand, 25903935 - 25903858
Alignment:
Q  58 ggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||||||||||  ||||| ||||||||||||  |||||| |||||||| ||| || ||||| || |||||||||||||    
T  25903935 ggcttatctactaacataagttttgtgagacttattgggagaacttatg-aaacagcttatggcatttttcataagctt 25903858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 26590330 - 26590408
Alignment:
Q  79 tttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||| |||| | || ||||||||| | |||||||||| |||||  ||||||||||| |||| | |||||||    
T  26590330 tttgtgagactgcttggaagaatttatgaaaacaatttatgacaactttcaagagcttttttcatcttactatcataag 26590408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 161
Target Start/End: Original strand, 6987683 - 6987783
Alignment:
Q  61 ttatctactggcataatt-tttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagct 159  Q
    ||||||||| |||||| | ||||||||||||||||||| | |||||| | | |  |||||||| | | ||||| || |||||||||||||| ||||||||    
T  6987683 ttatctactagcataagtgtttgtgagactgtttgggagagcttatggatacaacttatgaca-tgtccataaactattttcaacttatttccataagct 6987781  T
Q  160 ct 161  Q
    ||    
T  6987782 ct 6987783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 148
Target Start/End: Original strand, 13216207 - 13216240
Alignment:
Q  115 ttatgacaattttcataagcttttttcaacttat 148  Q
    |||||||||||||||||||||||||| |||||||    
T  13216207 ttatgacaattttcataagctttttttaacttat 13216240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 28300260 - 28300344
Alignment:
Q  79 tttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttca 164  Q
    |||||| ||||| ||| || || ||||||||| ||  ||||||| | ||| |||| | ||||||||||||||||||||||||||||    
T  28300260 tttgtgtgactgattgagagaatttatgaaaacagcctatgaca-tgttcttaagttgttttcaacttattttcataagctcttca 28300344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 30668320 - 30668403
Alignment:
Q  71 gcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||| |||| ||||||| ||||| | ||||| |||||| || |||||||| ||||||||||| ||||||| |||| ||||||||    
T  30668320 gcataagttttttgagactttttgg-agaacttgtgaaaacagcttatgacacttttcataagc-tttttcagcttaatttcataa 30668403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 38478866 - 38478825
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataa 76  Q
    ||||||| ||||||||||||||| || |||||||||||||||    
T  38478866 gcctgtttggattggcttatttgagcatatctactggcataa 38478825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 157
Target Start/End: Complemental strand, 25332891 - 25332807
Alignment:
Q  73 ataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||| |||||||||||| ||||||| |||||  ||||| |  ||||| || | |||||||| | |||||| ||||||||||||||    
T  25332891 ataagttttgtgagactatttgggagaacttgcgaaaacaacttatggcattattcataagttgttttcagcttattttcataag 25332807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 29126176 - 29126220
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataa 76  Q
    ||||| |||| ||||||||||||||| |||||||||| |||||||    
T  29126176 agggcttgtttggattggcttatttgagcttatctaccggcataa 29126220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 41512725 - 41512677
Alignment:
Q  115 ttatgacaattttcataagcttttttcaacttattttcataagctcttc 163  Q
    |||| ||| ||||||||||||||| ||| |||||||||||||| |||||    
T  41512725 ttataacacttttcataagcttttatcatcttattttcataagttcttc 41512677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 52259691 - 52259659
Alignment:
Q  129 ataagcttttttcaacttattttcataagctct 161  Q
    ||||||| |||||||||||||||||||||||||    
T  52259691 ataagctattttcaacttattttcataagctct 52259659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 96)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 2295251 - 2295132
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| | ||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||| || |||||||||||||||||||    
T  2295251 ggcctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataag 2295152  T
Q  134 cttttttcaacttattttca 153  Q
    || | |||||||||||||||    
T  2295151 ctctattcaacttattttca 2295132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 34 - 153
Target Start/End: Original strand, 14576569 - 14576688
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| ||||||||||||||| |||||||||||||| ||| |||||||  ||||||||||| ||||| |||||| || ||||||||||||||| |||    
T  14576569 ggcctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaag 14576668  T
Q  134 cttttttcaacttattttca 153  Q
    ||||||||| ||||||||||    
T  14576669 cttttttcagcttattttca 14576688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 473317 - 473196
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    |||||||  |||||||||||||| || ||||||||||||||| || ||||| ||  ||||||| |||||||||||| || |||| |||||||||||||||    
T  473317 gcctgtttagattggcttatttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttat-acaattttcataagc 473219  T
Q  135 ttttttcaacttattttcataag 157  Q
    |||||||||||||||||||||||    
T  473218 ttttttcaacttattttcataag 473196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 29904892 - 29904783
Alignment:
Q  48 ggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaactta 147  Q
    |||||||||| ||||||||||| |||||| ||||||||||||||||| || ||||||| |||| || ||||| ||||||||| |||||||||||| ||||    
T  29904892 ggcttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcacctta 29904793  T
Q  148 ttttcataag 157  Q
    ||||||||||    
T  29904792 ttttcataag 29904783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 44 - 157
Target Start/End: Complemental strand, 49938892 - 49938779
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaa 143  Q
    ||||| |||||||| | |||| |  |||||||| |||||||||| ||||||||| |||||||||||| || ||||||||||||||| |||||||||||||    
T  49938892 gattgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaa 49938793  T
Q  144 cttattttcataag 157  Q
    ||||||||||||||    
T  49938792 cttattttcataag 49938779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 37 - 157
Target Start/End: Original strand, 3233933 - 3234053
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||| |||||| |||||||| ||||||||| || | ||| ||||||||||||||| |||| |||||||||||| |  |||| ||| |||||||||| ||    
T  3233933 ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagttt 3234032  T
Q  137 ttttcaacttattttcataag 157  Q
    ||||| |||||||||||||||    
T  3234033 ttttctacttattttcataag 3234053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 42575393 - 42575503
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||| |||||||| ||||||||||| |||||| ||||||||| ||||||| || || |||| |||| |  |||||||| |||||||||||||||||||    
T  42575393 ggattgccttatttgagcttatctactagcataaattttgtgaggctgtttgagaaaatttataaaaacaacttatgacagttttcataagcttttttca 42575492  T
Q  143 acttattttca 153  Q
    |||| ||||||    
T  42575493 acttcttttca 42575503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 31 - 154
Target Start/End: Complemental strand, 27976759 - 27976639
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    |||||| |||| ||||||||||||||| ||| ||  |||| ||||| |||||| ||||||||||| | ||||| ||||||||| |||||||| |||||||    
T  27976759 tagggcttgtttggattggcttatttgagct-ata-actgacataagttttgttagactgtttggaa-aacttttgaaaatagcttatgacatttttcat 27976663  T
Q  131 aagcttttttcaacttattttcat 154  Q
    |||||||||||| |||||||||||    
T  27976662 aagcttttttcagcttattttcat 27976639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 37517101 - 37517204
Alignment:
Q  54 tttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    |||| |||||| |||| |||||| |||||||||||||| ||  | |||||| ||||| || ||||||||||||||| ||||||||||||| |||||||||    
T  37517101 tttgagcttatatacttgcataagttttgtgagactgtatgaaagaacttacgaaaacagcttatgacaattttcaaaagcttttttcaatttattttca 37517200  T
Q  154 taag 157  Q
    ||||    
T  37517201 taag 37517204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 157
Target Start/End: Original strand, 37631474 - 37631597
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| ||||||||||||||| ||| ||||| | |||||| ||| |||| || ||   ||| |||||||||||| || || |||||||||||| |||    
T  37631474 ggcctgtttggattggcttatttgagctcatctattagcataagtttagtgaaaccgtcatggaaaacttatgaaaacagcttctgacaattttcacaag 37631573  T
Q  134 cttttttcaacttattttcataag 157  Q
    ||||||||| ||||||||||||||    
T  37631574 cttttttcagcttattttcataag 37631597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 41184613 - 41184688
Alignment:
Q  82 gtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||||||   | ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  41184613 gtgagactgtttactagaacttatgaaaatagcttatgacaattttcataagtttttttcaacttattttcataag 41184688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 13810144 - 13810034
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||||||||||| |||||||||||| | ||| |||||||||||| |||  || |||||||||| | |||||||||||||||||| ||| |||| | |    
T  13810144 ggattggcttatttgtgcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttatgacaattttcaaaagtttttctta 13810045  T
Q  143 acttattttca 153  Q
     ||||||||||    
T  13810044 gcttattttca 13810034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 150
Target Start/End: Complemental strand, 33186462 - 33186344
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaa-ttttcata 131  Q
    ||||||||| ||||||||||||||| | |||||   |||||||| |||||||||||||| | ||| ||||||||||||  | ||||||||| |||||| |    
T  33186462 gggcctgtttggattggcttatttgagtttatccgttggcataagttttgtgagactgtctaggagaacttatgaaaactggttatgacaatttttcaaa 33186363  T
Q  132 agcttttttcaacttattt 150  Q
    ||||||||||| |||||||    
T  33186362 agcttttttcagcttattt 33186344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 5721071 - 5720959
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag-cttttttc 141  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||  |||||||||||| |||||||||||| || ||||||||| |||||||||  |||||||    
T  5721071 ggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatgacaa-tttcataagtattttttc 5720973  T
Q  142 aacttattttcata 155  Q
    | || |||||||||    
T  5720972 agctgattttcata 5720959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 27970243 - 27970332
Alignment:
Q  68 ctggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||| |||||||| ||| ||||||| ||||||| ||||  |||||||||| |||||||||||||||||||  |||||||||||||    
T  27970243 ctggcataagttttgtgatactctttgggagaacttataaaaacggtttatgacatttttcataagcttttttcagtttattttcataag 27970332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 37473565 - 37473435
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgaga----ctgtttgggataacttatgaaaatagtttatgacaattt 126  Q
    ||||||||||| ||||||||||||||| | |||||||| ||||||| ||| | ||||     ||||||||| ||||| |||||| |  |||||||| |||    
T  37473565 tagggcctgtttggattggcttatttgagattatctacgggcataagtttcgagagaatgtttgtttgggagaacttttgaaaacaacttatgacatttt 37473466  T
Q  127 tcataagcttttttcaacttattttcataag 157  Q
    ||||||||||||| || ||||||||||||||    
T  37473465 tcataagctttttccagcttattttcataag 37473435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 154
Target Start/End: Original strand, 43230687 - 43230805
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| |||||||| |||||| |||| ||||||||||||| ||||  |||| ||||| ||| || ||||||||| || |  ||||| |||| |||||    
T  43230687 ggcctgtttggattggcatatttgagcttctctactggcataagttttacgagattgtttaggagaatttatgaaaacagct--tgacagtttttataag 43230784  T
Q  134 cttttttcaacttattttcat 154  Q
    |||||||||||||||||||||    
T  43230785 cttttttcaacttattttcat 43230805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 38247485 - 38247397
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatg 119  Q
    ||||||||||| ||||||| |||||||  ||||||||||||||||| |||||||  ||||||||||| |||||||||||| || |||||    
T  38247485 tagggcctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatg 38247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 51929501 - 51929577
Alignment:
Q  81 tgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||| ||||||||| || | ||||||| || |||||||||||||||||||||||||||||||||||| ||||||    
T  51929501 tgtgagattgtttgggagaattcatgaaaacagcttatgacaattttcataagcttttttcaacttatttccataag 51929577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 24915010 - 24915085
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    ||||||||| |||||||||| || ||||||||| |  |||||||| ||||||||||||||||||||||||||||||    
T  24915010 ttttgtgaggctgtttgggacaatttatgaaaacaacttatgacatttttcataagcttttttcaacttattttca 24915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 41195120 - 41195231
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||||| |||||| |||| ||||||||||||| ||  |||| ||||||||||| ||||| |  |||||| |||||||| |||| ||||||||||||||    
T  41195120 ggattggcgtatttgagcttgtctactggcataagtt--gtgatactgtttgggagaacttttataaatagcttatgaca-ttttaataagcttttttca 41195216  T
Q  143 acttattttcataag 157  Q
     ||||||||||||||    
T  41195217 gcttattttcataag 41195231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 133
Target Start/End: Complemental strand, 1432661 - 1432571
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    ||||||||||||||| ||||||| || | ||||| |||||||||||||||||| | |||||||||||||||  ||||||| | ||||||||    
T  1432661 ggattggcttatttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgacattgttcataag 1432571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 45 - 155
Target Start/End: Complemental strand, 11941406 - 11941296
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    |||| ||||||||  ||| |||||| |||||  || ||||||||||||||||| | ||||||||||||| |||| ||| | |||||||||| |||||| |    
T  11941406 attgacttatttgaacttttctactagcatatgttatgtgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagc 11941307  T
Q  145 ttattttcata 155  Q
    |||||||||||    
T  11941306 ttattttcata 11941296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 14385707 - 14385781
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatga 107  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||| |||||||| ||| ||| |||||||||    
T  14385707 gggcctgttcggattggcttatttgagcttatctactggcataagtttcgtgagactattttggagaacttatga 14385781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 3887545 - 3887670
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||| ||||| |||||| |||||||| ||||  ||| ||| |||| |||||| || |||||||| | |||||||||||| |  |||||||| | ||||||    
T  3887545 agggtctgtttggattgacttatttgagctttactattggtataagttttgtaaggctgtttggaagaacttatgaaaacatcttatgacattgttcata 3887644  T
Q  132 agcttttttcaacttattttcataag 157  Q
    |||| |||| ||||||||||||||||    
T  3887645 agctgtttttaacttattttcataag 3887670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 15477710 - 15477597
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||| ||||||||||||| | ||||||||||| |||||| ||||||||||            ||||||||||| || ||||||||||||||| |    
T  15477710 agggcctgtttggattggcttattagagcttatctacttgcataagttttgtgaga------------acttatgaaaacagcttatgacaattttcaaa 15477623  T
Q  132 agcttttttcaacttattttcataag 157  Q
    ||||||||||| ||||| ||||||||    
T  15477622 agcttttttcagcttatattcataag 15477597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 36872886 - 36872764
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| ||||||||||||||  ||||| |||    ||||| ||||| |||||||||| ||| || |||||||||    ||||||||||||| ||    
T  36872886 tagggcctgtttggattggcttatttaagcttaactaacaacataagttttgcgagactgttttggagaatttatgaaaac---ttatgacaattttgat 36872790  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    ||||||||| |||||||||||||||||    
T  36872789 aagcttttt-caacttattttcataag 36872764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 58 - 154
Target Start/End: Original strand, 38018303 - 38018399
Alignment:
Q  58 ggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcat 154  Q
    ||||||||||||||||||| ||||||||||||| |||||| |||||||||||  || ||| |||| | ||||| || | |||||| |||||||||||    
T  38018303 ggcttatctactggcataagttttgtgagactggttgggaaaacttatgaaagcagattaggacattgttcattaggtattttcagcttattttcat 38018399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 5741752 - 5741638
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag-cttttttc 141  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||   ||||||||||| |||||||||||| |  ||||||||| |||||||||  |||||||    
T  5741752 ggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatgacaa-tttcataagtattttttc 5741654  T
Q  142 aacttattttcataag 157  Q
    | || |||||||||||    
T  5741653 agctgattttcataag 5741638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 161
Target Start/End: Original strand, 31517668 - 31517782
Alignment:
Q  47 tggcttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaact 145  Q
    ||||||||||| |||||| |||||||||||    |||||||||||||||||| ||||||| |||| |  | |||||| | |||||||||| |||||| ||    
T  31517668 tggcttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgaca-tgttcataagctgttttcagct 31517766  T
Q  146 tattttcataagctct 161  Q
    ||||||||||||||||    
T  31517767 tattttcataagctct 31517782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 36514607 - 36514714
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttatt 149  Q
    |||||||| | |||||||||| ||||| |||| |||||||||| |||| ||||||||||||||  |||||||| | || | ||||| |||||| ||| ||    
T  36514607 cttatttgagtttatctactgccataagttttttgagactgttagggagaacttatgaaaataacttatgacattgtttagaagctgttttcagcttttt 36514706  T
Q  150 ttcataag 157  Q
    ||||||||    
T  36514707 ttcataag 36514714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 153
Target Start/End: Original strand, 37617384 - 37617498
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| |||||||| | ||||||| || | ||| ||||||||||||||||| || || ||||||||| || || |||||| |||||||||| ||    
T  37617384 tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagcttttgacaaatttcataagc-tt 37617482  T
Q  138 tttcaacttattttca 153  Q
    | ||||||||||||||    
T  37617483 tgtcaacttattttca 37617498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 2778037 - 2777924
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||||||||||  ||||||||| | |||||| |||||||||||||||| ||| |||||||||||  |  |||||||  | |||||||||  ||||||    
T  2778037 ggattggcttattttagcttatctatttgcataagttttgtgagactgtttaggagaacttatgaaaccaacttatgac-gtattcataagccgttttca 2777939  T
Q  143 acttattttcataag 157  Q
     ||||||||||||||    
T  2777938 gcttattttcataag 2777924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 140
Target Start/End: Complemental strand, 6557111 - 6557021
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttttt 140  Q
    ||||||||  ||||||||||  ||||| |||||||||||| |||| || ||||||||||||||| |||||||| |||||| ||| ||||||    
T  6557111 cttatttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttatgacagttttcaaaaggtttttt 6557021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 161
Target Start/End: Original strand, 10199321 - 10199450
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    |||||||| | |||||| |||||||| |||||||||||  |||||    |||||| ||| ||||||| |||| |||||||||| |||||||| | |||||    
T  10199321 agggcctggttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgaca-tgttcat 10199419  T
Q  131 aagcttttttcaacttattttcataagctct 161  Q
    ||| | |||||| ||||||||||||||||||    
T  10199420 aagttgttttcagcttattttcataagctct 10199450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 164
Target Start/End: Original strand, 27146174 - 27146300
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| || ||||| ||||||||| |||||||| ||||||||||||  |||| | |||||| | ||| |  |||||||| | |||||||||| |    
T  27146174 tgtttggattgactgatttgagcttatctattggcataagttttgtgagacttgttggaagaacttaaggaaacaacttatgacattgttcataagctgt 27146273  T
Q  138 tttcaacttattttcataagctcttca 164  Q
    |||||||||| |||| |||| ||||||    
T  27146274 tttcaacttactttcgtaagttcttca 27146300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 34795359 - 34795437
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||||| ||||||| ||||||| |||   |||||||||||| ||||| |||||||||||||| ||||||||||||    
T  34795359 agggcctgtttggattgggttatttgagctagcctactggcataaattttgcgagactgtttgggagaacttatgaaaa 34795437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 39976123 - 39976213
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    |||||| ||| ||| || |||||||| | |||||||||| ||||| |||||||| |||||||| || |||||||||||||| |||||||||    
T  39976123 agggccagtttggactgacttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatgaaaataatttatgaca 39976213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 141
Target Start/End: Original strand, 50644174 - 50644279
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaa--ttttcataagct 135  Q
    |||| |||||| |||||||| |||||||||||  ||||  |||||||||||||||||||| |||||||||||| |  ||| |||||  |||||| |||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaacttacgacaaatttttcacaagct 50644273  T
Q  136 tttttc 141  Q
    ||||||    
T  50644274 tttttc 50644279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Original strand, 52863291 - 52863365
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||||||||||||||||||||| |||||||| ||| |||||||| ||| || |||||||| ||||| ||||    
T  52863291 gcttatctactggcataatttttgtgtgactgtttcggagaacttatggaaaaagcttatgacatttttcttaag 52863365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 50 - 107
Target Start/End: Original strand, 33204325 - 33204382
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatga 107  Q
    |||||||| |||||||||||| ||||| |||||||||||||||||||| |||||||||    
T  33204325 cttatttgagcttatctactgacataagttttgtgagactgtttgggagaacttatga 33204382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 38001752 - 38001663
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgac 121  Q
    |||||||| | ||||  ||||||||| | ||||| |||| ||||| |||||||||||||||||||| |||||||||||| || |||||||    
T  38001752 agggcctgcttggataagcttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatgac 38001663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 83 - 220
Target Start/End: Complemental strand, 44422804 - 44422668
Alignment:
Q  83 tgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttcataatacggtatagaaata 182  Q
    ||||||||| ||||| | ||||||||||||| |||||||| | | ||||||||   | || |||||||||||||||||| ||  |||   |||| |||||    
T  44422804 tgagactgtctgggagagcttatgaaaatagcttatgaca-tgtccataagctgactacagcttattttcataagctctccaggatagcttataaaaata 44422706  T
Q  183 ccttataacttatatgaaaacagtttcagtttatttta 220  Q
     |||||| |||||||||||||||||| || ||||||||    
T  44422705 gcttatagcttatatgaaaacagtttgagattatttta 44422668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 157
Target Start/End: Complemental strand, 7941758 - 7941638
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||| ||||||| ||||||| | |||||| ||  | | | |||||||||||||||||| | || ||||||||| || |||||||| | |||  |||||     
T  7941758 ctgtttggattggtttatttgagtttatctgctaacgtgagttttgtgagactgtttggaagaatttatgaaaacagcttatgacattgttccgaagcta 7941659  T
Q  137 ttttcaacttattttcataag 157  Q
    |||||||||||||||||||||    
T  7941658 ttttcaacttattttcataag 7941638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 169
Target Start/End: Original strand, 37593615 - 37593734
Alignment:
Q  50 cttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttat 148  Q
    |||||||| |||||| |||||||||||    |||| ||||||||||||| |||| ||||| | |  |||||||| | |||||||||| |||||| |||||    
T  37593615 cttatttgagcttatatactggcataaacacttgttagactgtttgggaaaactaatgaacacaacttatgaca-tgttcataagctgttttcagcttat 37593713  T
Q  149 tttcataagctcttcataata 169  Q
    |||||||||||||||| ||||    
T  37593714 tttcataagctcttcaaaata 37593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 155
Target Start/End: Original strand, 40977375 - 40977439
Alignment:
Q  91 tttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcata 155  Q
    ||||||| |||||||||||| | |||||||||||||||| ||||||||| || ||||||||||||    
T  40977375 tttgggagaacttatgaaaacaatttatgacaattttcaaaagctttttccagcttattttcata 40977439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 2295348 - 2295257
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttggga-taacttatgaaaatagtttatgaca 122  Q
    |||||||||| ||||||||||||||| |||||||||||| | ||| |||| ||||||| |||||||  ||||||| |||| |||||| ||||    
T  2295348 agggcctgtttggattggcttatttgagcttatctactgacttaagttttctgagactatttgggagaaacttattaaaacagtttaagaca 2295257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 86 - 153
Target Start/End: Complemental strand, 5709729 - 5709663
Alignment:
Q  86 gactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    |||||||||||| || |||||||||||| || || ||||||||||||||| |||||||||||||||||    
T  5709729 gactgtttgggagaatttatgaaaatagcttttggcaattttcataagct-ttttcaacttattttca 5709663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 59 - 153
Target Start/End: Complemental strand, 17830278 - 17830186
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    |||||||||||| ||||| |||||||||  |||||| ||||| || | |||  || | |||||| ||||||||||||||||||||||||||||||    
T  17830278 gcttatctactgacataaattttgtgag--tgtttgtgataatttttaaaaccagctaatgacatttttcataagcttttttcaacttattttca 17830186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 30286499 - 30286545
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaact 145  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  30286499 aacttatgaaaacagcttatgacaattttcataagcttttttcaact 30286545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 47498756 - 47498877
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    ||||||| |||||| |||||| | |||||| || |||| ||| |||| || || ||||||||| ||||||||||||||| |||||| | | ||||||||     
T  47498756 gcctgtttggattgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatgatattgttcataagt 47498854  T
Q  135 ttttttcaacttattttcataag 157  Q
    | |||| | ||||||||||||||    
T  47498855 tgtttttagcttattttcataag 47498877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 7928004 - 7927911
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    |||||| ||||||||||||| ||||| ||||||||   ||||||||| | | |||||| | |  ||||||||||| ||||||||||||||||||    
T  7928004 ttatttcggcttatctactgacataaattttgtgactttgtttgggagagcctatgaatacaacttatgacaattgtcataagcttttttcaac 7927911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 153
Target Start/End: Original strand, 17603349 - 17603418
Alignment:
Q  84 gagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    |||||| || |||| |||||| ||||| || |||||||||||||||||| |||||| |||||||||||||    
T  17603349 gagactattagggagaacttacgaaaacagcttatgacaattttcataaactttttacaacttattttca 17603418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 44931901 - 44931970
Alignment:
Q  65 ctactggcataatttttgtgagactgtttgggataacttatg-aaaatagtttatgacaattttcataag 133  Q
    ||||| |||||| ||||| |||||||||||||| || ||||| ||||||| |||||||||||||||||||    
T  44931901 ctactagcataagttttgagagactgtttgggagaatttatgaaaaatagcttatgacaattttcataag 44931970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 1510236 - 1510348
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    ||||||||||||| | |||| ||   |||||| |||||||| |||||||||   | ||| || ||  ||||| || ||||||||||||||||||||||||    
T  1510236 attggcttatttgagtttatatatcagcataagttttgtgatactgtttggtggagcttttggaagcagtttttgccaattttcataagcttttttcaac 1510335  T
Q  145 ttattttcataag 157  Q
    |||||||| ||||    
T  1510336 ttattttcgtaag 1510348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 164
Target Start/End: Original strand, 37842269 - 37842400
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||| || |||||||||||||| ||||||||||||  |||| ||| |||| ||||||  | | |||||||||||| |  | ||||| || ||||||    
T  37842269 agggcctgctaagattggcttatttgagcttatctactgatataagtttggtgacactgttcagtagaacttatgaaaacatctaatgac-atgttcata 37842367  T
Q  132 agcttttttcaacttattttcataagctcttca 164  Q
    |||  |||||| |||||||| ||||| ||||||    
T  37842368 agcagttttcagcttatttttataagttcttca 37842400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 9506969 - 9507044
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||  |||||||||||||  |||||| |||| ||||||| |||||||||||||||| |  ||||||||||||    
T  9506969 gcctgttttgattggcttattttagcttatatactagcataatgtttgtgagactgtttgagtgaacttatgaaaa 9507044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 10666834 - 10666760
Alignment:
Q  79 tttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcat 154  Q
    ||||||||||||||||| | |||| ||||||| ||  ||||||| | |||||||||||||||||||| ||||||||    
T  10666834 tttgtgagactgtttggaagaactgatgaaaa-agcctatgacattgttcataagcttttttcaactaattttcat 10666760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 341545 - 341479
Alignment:
Q  91 tttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||| ||||||||| |  ||||||||||||||||||| |||||||||  | ||||||||||    
T  341545 tttgggataatttatgaaaacaacttatgacaattttcataagtttttttcaatctgttttcataag 341479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 159
Target Start/End: Complemental strand, 11695968 - 11695891
Alignment:
Q  81 tgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagct 159  Q
    ||||||| ||||||||| | | |||| ||| ||||||||||| | | |||||||| |||||||||||||||||||||||    
T  11695968 tgtgagattgtttgggaaagcatatggaaacagtttatgaca-tgtccataagctgttttcaacttattttcataagct 11695891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 27820156 - 27820233
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||||||||||||| ||| || ||||||||| || |||| ||| | |||||||||| |||||| |||||||||||||    
T  27820156 ttttgtgagactgttttggagaatttatgaaaa-agcttattacattgttcataagctattttcagcttattttcataa 27820233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 36872352 - 36872294
Alignment:
Q  102 ttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctc 160  Q
    ||||||||| || |||| | |||||||||||||||||||||||||| ||||||| ||||    
T  36872352 ttatgaaaacagcttattataattttcataagcttttttcaacttaatttcatatgctc 36872294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 102 - 160
Target Start/End: Complemental strand, 36872513 - 36872455
Alignment:
Q  102 ttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctc 160  Q
    ||||||| | || |||||| ||||||||||||||||||| ||||||| |||||||||||    
T  36872513 ttatgaatacagcttatgaaaattttcataagctttttttaacttatattcataagctc 36872455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 38480515 - 38480613
Alignment:
Q  60 cttatctactggcataatttttgtgagactgtttgggataacttatg-aaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||| | |||||| |||||||||||| ||||||| |||| ||| ||||||| |||||||| |  |||||| || |||| | ||||||||||||||    
T  38480515 cttatctagtagcataagttttgtgagactatttgggagaactaatgaaaaatagcttatgacattgctcataaactgtttttagcttattttcataag 38480613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 42174929 - 42174887
Alignment:
Q  115 ttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  42174929 ttatgacaattttcataagctgtttttaacttattttcataag 42174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 4445816 - 4445736
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    |||||||||||||||||| || ||||||||  || |||| ||| | |||| ||||| ||||||||||||||||| |||||||    
T  4445816 ttgtgagactgtttgggagaatttatgaaagcagcttataaca-tgttcagaagctgttttcaacttattttcacaagctct 4445736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 153
Target Start/End: Complemental strand, 14332134 - 14332018
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    |||||| |||||||| ||||   |||||||||||| ||||  ||||||||||||||| |||  |||||||||||| |  ||||||| | |||| | ||||    
T  14332134 cctgtttggattggcatattcaagcttatctactgtcatatgttttgtgagactgttcgggtgaacttatgaaaacaaattatgac-actttcgttagct 14332036  T
Q  136 tttttcaacttattttca 153  Q
    ||||||| |||| |||||    
T  14332035 tttttcagcttaatttca 14332018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 164
Target Start/End: Original strand, 27145688 - 27145780
Alignment:
Q  71 gcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttca 164  Q
    |||||| |||||||||||| ||||| | |||||| |||||    |||||||| | |||||||| |||||||| |||||||||||||| ||||||    
T  27145688 gcataagttttgtgagactttttggaagaacttaagaaaacgacttatgacattgttcataag-ttttttcagcttattttcataagttcttca 27145780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 41162993 - 41163038
Alignment:
Q  62 tatctactggcataatttttgtgagactgtttgggataacttatga 107  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||    
T  41162993 tatctattggcataagttttttgagactgtttgggataacttatga 41163038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 781185 - 781221
Alignment:
Q  185 ttataacttatatgaaaacagtttcagtttattttac 221  Q
    |||||||||||||||||||||||||| ||||||||||    
T  781185 ttataacttatatgaaaacagtttcactttattttac 781221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 35925829 - 35925718
Alignment:
Q  51 ttatttgggcttatctactggcataattt-ttgtgagactgtttgggat-aacttatgaaaatagtttatgacaattttcataagcttttttcaacttat 148  Q
    ||||||| ||||| ||||||||||||    ||| |||||||| |||||  |||||||||||| || |||||||| | |||||||||| ||||||||||||    
T  35925829 ttatttgagcttagctactggcataagcgcttgagagactgtctgggaggaacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttat 35925731  T
Q  149 tttcataagctct 161  Q
    || ||||| ||||    
T  35925730 ttccataaactct 35925718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 36872663 - 36872623
Alignment:
Q  114 tttatgacaattttcataagcttttttcaacttattttcat 154  Q
    ||||||| ||||||||||| |||||||||||||||||||||    
T  36872663 tttatgaaaattttcataatcttttttcaacttattttcat 36872623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 38170652 - 38170735
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttca 164  Q
    ||||||||||| |||||| | |||||||||| || ||||||| || |||||||| | |||||| ||| ||||| |||||||||||    
T  38170652 ttgtgagactgcttgggagagcttatgaaaacagcttatgac-atgttcataagttgttttcagcttgttttcctaagctcttca 38170735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 4576907 - 4576837
Alignment:
Q  86 gactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||| || ||||||||||||||||||||||| || || ||||| | | |||| ||||||||||||||    
T  4576907 gactgtttgagacaacttatgaaaatagtttatgac-atgtttataagttgtgttcagcttattttcataag 4576837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 7218081 - 7218176
Alignment:
Q  126 ttcataagcttttttcaacttattttcataagctcttcataatacggtatagaaataccttataacttatatgaaaacagtttcagtttattttac 221  Q
    |||| ||||| ||||||||||||||||||||| ||| ||  ||| | |||  ||| | |||||| |||||||||||||| ||| | ||||||||||    
T  7218081 ttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttattttac 7218176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 164
Target Start/End: Original strand, 19092368 - 19092428
Alignment:
Q  102 ttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttca 164  Q
    ||||||||||||| |||||||  | |||||| || |||||| |||||||||||||||||||||    
T  19092368 ttatgaaaatagtctatgaca--tgtcataaactgttttcaccttattttcataagctcttca 19092428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Original strand, 33546455 - 33546498
Alignment:
Q  121 caattttcataagcttttttcaacttattttcataagctcttca 164  Q
    |||||||||||||||||||  ||| |||||||||||||||||||    
T  33546455 caattttcataagctttttcaaacgtattttcataagctcttca 33546498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 34952359 - 34952288
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataactt 103  Q
    |||| ||||| ||||||||||||||| ||||||||| ||| ||||  ||||||||| | ||||||| |||||    
T  34952359 agggtctgtttggattggcttatttgagcttatctattgggataagatttgtgagattatttgggagaactt 34952288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 41638227 - 41638310
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatt-tttgtgagactgtttgggataacttatgaaaatagtttatga 120  Q
    |||| |||||| |||| ||| || |||||||||||||||   ||||||||||||||||||| |  ||||||||| |||||||||    
T  41638227 tgtttggattgtcttaattgagcctatctactggcataagcatttgtgagactgtttgggagagattatgaaaacagtttatga 41638310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 45975806 - 45975723
Alignment:
Q  73 ataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||| |||| ||||||||||  ||| ||| |||||||| ||| ||| ||| | |||||||||| |||||| |||||||||||||    
T  45975806 ataaattttctgagactgttcaggagaacatatgaaaacagtgtataacattattcataagctgttttcagcttattttcataa 45975723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 12287151 - 12287224
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagt-ttatgacaattttcataagcttttttcaacttatttt 151  Q
    ||||||||||||| |||||| ||||| |||||||||| ||||| | ||||||||||| | |||||| ||||||||    
T  12287151 ttttgtgagactgcttgggagaacttgtgaaaatagtcttatggc-attttcataagttgttttcagcttatttt 12287224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 12481612 - 12481531
Alignment:
Q  79 tttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||||| ||||  | |||||||||||||||||||| || || || | ||| | ||||||| |||||||||||||||||    
T  12481612 tttgtgagactctttgtaagaacttatgaaaatagtttatcac-atcttaacaagttgttttcaagttattttcataagctct 12481531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 37811961 - 37811880
Alignment:
Q  79 tttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||| |||| ||| || |||||||||||| || |||||||| | ||||||| || |||||||||||||| ||| ||||||    
T  37811961 tttgtgatactggttgagagaacttatgaaaacagcttatgaca-tgttcataaactgttttcaacttatttccattagctct 37811880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 128
Target Start/End: Complemental strand, 41505832 - 41505745
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttc 128  Q
    |||||| |||| ||||||||||||||| |||||||||||| ||||| |          ||||||||| |||||||||||| || ||||||||||||||    
T  41505832 tagggcttgtttggattggcttatttgagcttatctactgacataagt----------tgtttgggagaacttatgaaaacagcttatgacaattttc 41505745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Original strand, 49692014 - 49692056
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    ||||||||||||||| || ||||||||||||||| ||||||||    
T  49692014 ttgtgagactgtttgagagaacttatgaaaatagcttatgaca 49692056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 10233579 - 10233656
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaatttt 127  Q
    |||||| | ||||||| |||| ||||  |||||| ||||||||||| | |||||||||||| || |||||||| ||||    
T  10233579 cttattagagcttatccactgacatatgttttgtaagactgtttggaagaacttatgaaaacagcttatgacattttt 10233656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 22416835 - 22416868
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataa 76  Q
    ||||||||||||||| ||||||||||||||||||    
T  22416835 ggattggcttatttgagcttatctactggcataa 22416868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 161
Target Start/End: Original strand, 31294530 - 31294563
Alignment:
Q  128 cataagcttttttcaacttattttcataagctct 161  Q
    |||||||| |||||||||||||||||||||||||    
T  31294530 cataagctcttttcaacttattttcataagctct 31294563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 44217146 - 44217195
Alignment:
Q  94 gggataacttatgaaaatagtttatgacaattttcataagcttttttcaa 143  Q
    |||| |||||||||||| || |||| |||||||| |||||||||||||||    
T  44217146 gggacaacttatgaaaacagcttatcacaatttttataagcttttttcaa 44217195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 48536653 - 48536690
Alignment:
Q  81 tgtgagactgtttgggataacttatgaaaatagtttat 118  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  48536653 tgtgagactgtttgggagaacttatgaaaatagcttat 48536690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 51190982 - 51190905
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    ||||||||||||| |||||| ||||| ||||  ||||| ||||||||||  || ||||||| ||||| | ||||||||    
T  51190982 attggcttatttgagcttatatactgacatatgttttgcgagactgtttaagagaacttataaaaatggcttatgaca 51190905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 137
Target Start/End: Complemental strand, 7862202 - 7862130
Alignment:
Q  65 ctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||||||||||| |||||| ||||| ||| ||| ||| ||| |||| || || |||||||||||| |||||||    
T  7862202 ctactggcataagttttgttagactatttaggagaacctattaaaacagcttctgacaattttcacaagcttt 7862130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Complemental strand, 21002312 - 21002268
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataa 76  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||    
T  21002312 agggcttgtttggattggcttatttgagcttatctacttgcataa 21002268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 25479668 - 25479609
Alignment:
Q  101 cttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||||||| |||||||| | ||||| || | |||||| ||||||||||||||||||    
T  25479668 cttatgaaaatagattatgaca-tgttcattagttgttttcagcttattttcataagctct 25479609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 164
Target Start/End: Complemental strand, 34290344 - 34290261
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttca 164  Q
    |||||| ||| ||||||| || |||| |||| || |||||||| | |||||||| | |||||| |||||||||||||| ||||||    
T  34290344 ttgtgaaactatttgggagaatttattaaaaaagcttatgaca-tattcataagttgttttcagcttattttcataagttcttca 34290261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 51695456 - 51695532
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||||||||||||| | |||||||  ||| |  |||| ||| | |||||||||| |||||| |||||||||||||    
T  51695456 ttgtgagactgtttggaagaacttatataaacaacttatcacattgttcataagctattttcagcttattttcataa 51695532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 31365112 - 31365225
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| |||||||||||  || ||||||||||||||||||||||||||||    
T  31365112 ggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttca 31365211  T
Q  143 acttattttcataa 156  Q
    ||| ||||||||||    
T  31365212 actcattttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 39980887 - 39980761
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||| ||||| |||||||||| |||| ||||||||||| |||||| ||||||||||||||||  || |||||||||||| || |||||||   ||||||    
T  39980887 tagggtctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcat 39980788  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    |||||||||||||||||||||||||||    
T  39980787 aagcttttttcaacttattttcataag 39980761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 31365233 - 31365346
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||||||||||| | ||||||| ||||||||||||||||| ||||||||||| |||||||||| | || ||||||||||||||||||   |||||||    
T  31365233 ggattggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttcataaatctttttca 31365332  T
Q  143 acttattttcataa 156  Q
    ||| ||||||||||    
T  31365333 actcattttcataa 31365346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 157
Target Start/End: Complemental strand, 30444029 - 30443925
Alignment:
Q  53 atttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttc 152  Q
    ||||| |||||||||||||||||| ||| |||||||||||||| | | |||||||||| || ||||||||||||||| |||||||||||| |||||||||    
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttc 30443930  T
Q  153 ataag 157  Q
    |||||    
T  30443929 ataag 30443925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 20880627 - 20880508
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| ||||||||||||||| ||||||||||| |||||| |||  | ||||| ||||||| ||| |||||||| || |||||||||||||||||||||||    
T  20880627 tgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttt 20880528  T
Q  138 tttcaacttattttcataag 157  Q
    ||| | ||||||||||||||    
T  20880527 tttgagcttattttcataag 20880508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 13715488 - 13715610
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    ||||||| |||| ||||||||||  |||||||||| |||||  |||||||||||||||||| | |||||   |||| || ||||||||| ||||||||||    
T  13715488 gcctgttcggatcggcttatttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttatgacaactttcataagc 13715587  T
Q  135 ttttttcaacttattttcataag 157  Q
     ||||||||||||||||||||||    
T  13715588 atttttcaacttattttcataag 13715610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 21367813 - 21367699
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||||||||||| | ||||||||  |||||| ||||||| |||||||||||| |||||||||||| || |||||||| | |||| ||||| ||||||    
T  21367813 ggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttca 21367714  T
Q  143 acttattttcataag 157  Q
     ||||||||||||||    
T  21367713 gcttattttcataag 21367699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 161
Target Start/End: Complemental strand, 20257690 - 20257563
Alignment:
Q  36 cctgttaggattggcttatttgggctt-atctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    |||||| ||||||||||||||| | || |||||| | ||||| |||||||||||||||||||| |||||||||||  || | |||||||||||||||||     
T  20257690 cctgtttggattggcttatttgagttttatctacagccataaattttgtgagactgtttgggagaacttatgaaagcagctaatgacaattttcataagt 20257591  T
Q  135 ttttttcaactta-ttttcataagctct 161  Q
    |||||  |||||| ||||||||||||||    
T  20257590 tttttaaaacttatttttcataagctct 20257563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 18405755 - 18405869
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||| ||||||| |||||||||||| ||||| |||||||||||||||||  | |||||||||||| |||| | |||| ||||||||| ||||||  |    
T  18405755 ggattggtttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacagttcacgacacttttcataatctttttcaa 18405854  T
Q  143 acttattttcataag 157  Q
     |||| |||||||||    
T  18405855 gcttaatttcataag 18405869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 153
Target Start/End: Original strand, 24085262 - 24085372
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||||| || ||| |||||||||||| || |||||  | | |||||| ||| ||||||    
T  24085262 ggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatggtactgttcatacgctgttttca 24085361  T
Q  143 acttattttca 153  Q
     ||||||||||    
T  24085362 gcttattttca 24085372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 37689375 - 37689262
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||| ||||||||| |||||| |||||  |||  || ||||| ||||| ||||| |||||| ||||| || ||||||||||||||| ||||||||||||    
T  37689375 ggattagcttatttgagcttatttactgaaataggttctgtgatactgtatgggagaacttaagaaaacagcttatgacaattttca-aagcttttttca 37689277  T
Q  143 acttattttcataag 157  Q
    |||||||||||||||    
T  37689276 acttattttcataag 37689262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 86 - 155
Target Start/End: Complemental strand, 944665 - 944596
Alignment:
Q  86 gactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcata 155  Q
    |||||||||||| ||||||||||||||| |||||||||||| ||||| |||||||||||||| |||||||    
T  944665 gactgtttgggaaaacttatgaaaatagcttatgacaatttccataatcttttttcaacttactttcata 944596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 155
Target Start/End: Complemental strand, 26911696 - 26911619
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcata 155  Q
    ||||||||||| |||||||||||  |||||||| || ||||||||||||||||||| |||||||||||||||| ||||    
T  26911696 ttttgtgagaccgtttgggataatatatgaaaacagcttatgacaattttcataagtttttttcaacttatttccata 26911619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 466351 - 466225
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| ||||||||| ||  | ||||| | |||| ||||  |||||||||||||||||||||||||||  |||| || || | ||| ||||| |    
T  466351 tagggcctgtttggattggctcatcagagcttaaccactgacatagattttgtgagactgtttgggataacttacaaaaacagcttttaacatttttctt 466252  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    |||||||||| | ||||||||||||||    
T  466251 aagctttttttagcttattttcataag 466225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 902081 - 901956
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||| ||||| ||||||  ||||||| ||||||||| || || || ||||| | | |||||||||| |||||||||||| || | || ||| ||| |||    
T  902081 tagggtctgtttggattgctttatttgagcttatctagtg-cagaagttttgcgtggctgtttgggaaaacttatgaaaacagctaataacattttccat 901983  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    |||||||||||||||||||||||||||    
T  901982 aagcttttttcaacttattttcataag 901956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 46778120 - 46778222
Alignment:
Q  48 ggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaactta 147  Q
    |||||||||| |||||| || |||||||| |||||||| || |||||||| |||||||||||| |  |||||||| |||||||||| ||| |||| ||||    
T  46778120 ggcttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacatttttcataagttttgttcagctta 46778219  T
Q  148 ttt 150  Q
    |||    
T  46778220 ttt 46778222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 49557022 - 49556897
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgg------gataacttatgaaaatagtttatgacaat 124  Q
    |||||||| || |||||||||||| || ||||||| | |||||||| |||||||||||| || |       || || ||||||||| || ||||||||||    
T  49557022 tagggcctatttggattggcttatctgagcttatcaagtggcataagttttgtgagactcttagtctttcagagaatttatgaaaacagcttatgacaat 49556923  T
Q  125 tttcataagcttttttcaacttattt 150  Q
    ||||||||||||||||||||||||||    
T  49556922 tttcataagcttttttcaacttattt 49556897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 26878344 - 26878235
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    ||||||||||| | |||||||||||| ||||| ||  |||| |||||||| || ||||| ||||||||| |||||||| | ||||||| || |||||| |    
T  26878344 attggcttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaacttgtgaaaatagcttatgacattgttcataaactgttttcagc 26878245  T
Q  145 ttattttcat 154  Q
    ||||||||||    
T  26878244 ttattttcat 26878235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 9832680 - 9832800
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaa 143  Q
    ||||| |||||||| |||||| || || ||||| |||||| | ||||||||||| ||||| |||||| || ||||| |  ||||||||| ||||||||||    
T  9832680 gattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatgccttttttcataaacttttttcaa 9832779  T
Q  144 cttattttcataagctcttca 164  Q
    ||||| || ||||| ||||||    
T  9832780 cttatatttataagttcttca 9832800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 47132470 - 47132397
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    ||||||| ||||||||||||||| ||||||||||||||  || |||||||||||||||| ||| ||||||||||||    
T  47132470 gcctgtttggattggcttatttgagcttatctactggc--aagttttgtgagactgttttggagaacttatgaaaa 47132397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 157
Target Start/End: Original strand, 3845498 - 3845600
Alignment:
Q  54 tttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    |||| |||||||||||||||||| |||||||||||||||||  | ||| | |||| | || ||||||| ||||| |||| ||||||||| ||||||||||    
T  3845498 tttgagcttatctactggcataagttttgtgagactgtttgatagaacatctgaagacagattatgac-atttttataatcttttttcagcttattttca 3845596  T
Q  154 taag 157  Q
    ||||    
T  3845597 taag 3845600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 43 - 142
Target Start/End: Original strand, 51929281 - 51929380
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||| ||||||||  ||||| ||||||||||| |||||||| ||| |||| || || || |||||| || ||||||||||||||||| ||||||||||    
T  51929281 ggattgacttatttgaccttatttactggcataagttttgtgatactatttgagagaatttctgaaaacagattatgacaattttcataggcttttttca 51929380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 204
Target Start/End: Original strand, 402457 - 402627
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| || ||| | |||||| | ||||| |||  ||||| |||||  ||||||||||||| ||| |||||||| || |||||||| | ||||||||    
T  402457 ggcctgtttgggttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacattgttcataag 402556  T
Q  134 cttttttcaacttattttcataagctcttcataatacggtatagaaataccttataacttatatgaaaaca 204  Q
    || |||||| |||| ||||| ||| ||||||  |||   |||| ||| | ||||||||||||| |||||||    
T  402557 ctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaaca 402627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 138
Target Start/End: Original strand, 42799880 - 42799986
Alignment:
Q  33 gggcctgttaggattggcttatttgggctt-atctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    ||||||||| ||||||||||||||| |||| |||||||| ||||  |||||||| ||| ||||||| |||||||||||| |  | |||||| |||||| |    
T  42799880 gggcctgtttggattggcttatttgagctttatctactgacatatgttttgtgaaactctttgggagaacttatgaaaacatgtcatgacagttttcaaa 42799979  T
Q  132 agctttt 138  Q
    |||||||    
T  42799980 agctttt 42799986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 140
Target Start/End: Original strand, 22882 - 22987
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    |||||||  ||||||||||||||  ||| ||||||||||||| |||||||||| ||||| ||| || ||||||||| || ||| || |||||||| |||     
T  22882 gcctgttgagattggcttatttgaacttgtctactggcataagttttgtgagattgtttaggagaagttatgaaaacagcttacgataattttcacaagg 22981  T
Q  135 tttttt 140  Q
    ||||||    
T  22982 tttttt 22987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 584192 - 584071
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||| |||||||| ||||||||||| |||||| || ||||||||||||| ||| || ||||||||| || ||| | || |||||||| | || ||| |    
T  584192 ggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagcttacggcagttttcataggtttctttaa 584093  T
Q  143 acttattttcataagctcttca 164  Q
     |||| ||||||||| ||||||    
T  584092 gcttaatttcataagttcttca 584071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 39602132 - 39602248
Alignment:
Q  40 ttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttt 139  Q
    |||| ||||||||||||| ||||| |||||||||| | ||||||||| || ||||| | | |||||||| | || ||||||| || |||||||  | |||    
T  39602132 ttagaattggcttatttgagcttagctactggcatcagttttgtgaggctatttggaagagcttatgaagacagcttatgac-atgttcataaattgttt 39602230  T
Q  140 tcaacttattttcataag 157  Q
    ||||||||||||||||||    
T  39602231 tcaacttattttcataag 39602248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 157
Target Start/End: Original strand, 53789406 - 53789499
Alignment:
Q  62 tatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||| ||||| ||||||||||||  ||| || ||||| || ||| || |||||||| ||||||||||||||||||| |||| |||||||||    
T  53789406 tatctactgacataagttttgtgagact--ttgagagaacttttggaaacagcttatgacacttttcataagcttttttcagcttaatttcataag 53789499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 46478763 - 46478721
Alignment:
Q  115 ttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  46478763 ttatgacagttttcataagcttttttcaacttattttcataag 46478721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 121
Target Start/End: Original strand, 44014712 - 44014801
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatgac 121  Q
    ||||||||| ||||||||||||||| | ||||||||| ||||||    ||||||||||||||| || |||||||||||| || |||||||    
T  44014712 gggcctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgac 44014801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 151
Target Start/End: Original strand, 53762306 - 53762426
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcat-aatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    ||||||||| | ||||||| ||||||| ||||||||||| |||| |||   ||| |||||||| |||| || || |||||| || ||||||| || ||||    
T  53762306 tagggcctgcttggattggtttatttgagcttatctactagcataaatgcctgtaagactgttagggagaaattttgaaaacagcttatgac-atgttca 53762404  T
Q  130 taagcttttttcaacttatttt 151  Q
    |||||| |||||||||||||||    
T  53762405 taagctgttttcaacttatttt 53762426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 97 - 157
Target Start/End: Complemental strand, 5391970 - 5391911
Alignment:
Q  97 ataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||||| || |||||||| | |||||||||| |||||||||||||||||||||    
T  5391970 ataacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttattttcataag 5391911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 26878228 - 26878152
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcat 154  Q
    |||||||||||||||||||| || || ||||||||||| |||||| | ||||||| || |||||| | |||||||||    
T  26878228 ttttgtgagactgtttgggagaatttgtgaaaatagttaatgacattgttcataaactgttttcagcatattttcat 26878152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 35394487 - 35394535
Alignment:
Q  108 aaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    ||||||||||||||| | |||||||||| ||||||||||||||||||||    
T  35394487 aaatagtttatgacattgttcataagctgttttcaacttattttcataa 35394535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 164
Target Start/End: Complemental strand, 38902218 - 38902091
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    |||||| | |||| || ||||| |||||||||||||||||| |||||  | ||||||||| | || ||||||||| ||  ||||||| | |||||| | |    
T  38902218 cctgtttgaattgcctcatttgagcttatctactggcataagttttgcaa-actgtttggaagaatttatgaaaacagcatatgacattgttcatacgtt 38902120  T
Q  136 tttttcaacttattttcataagctcttca 164  Q
     |||||||||||||||||| || ||||||    
T  38902119 gttttcaacttattttcatgagttcttca 38902091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 46031134 - 46031022
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    ||||||||||||| | ||||||| ||  |||| |||| |||||||||||  || |||||| ||||| ||  ||||||| | |||||||||| |||||| |    
T  46031134 attggcttatttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatgacattattcataagctgttttcagc 46031035  T
Q  145 ttattttcataag 157  Q
    ||||||| |||||    
T  46031034 ttattttaataag 46031022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 154
Target Start/End: Complemental strand, 20170625 - 20170558
Alignment:
Q  87 actgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcat 154  Q
    ||||||||||| |||||| ||||| || | |||  | |||||||||||||||||||||||||||||||    
T  20170625 actgtttgggagaacttaagaaaacagctaatgggatttttcataagcttttttcaacttattttcat 20170558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 20170630 - 20170689
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttg 94  Q
    ||||||| ||||||||||||||| ||||||||| || ||||| ||| |||||||||||||    
T  20170630 gcctgtttggattggcttatttgagcttatctagtgacataagtttagtgagactgtttg 20170689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 157
Target Start/End: Original strand, 34610737 - 34610844
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttatt 149  Q
    |||||||| |||||||||||| ||||| ||||||   ||| ||||||| ||||||||||||  | |||||||| | ||||||||   |||||| || |||    
T  34610737 cttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatgacattgttcataagtggttttcagctgatt 34610836  T
Q  150 ttcataag 157  Q
    ||||||||    
T  34610837 ttcataag 34610844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 36630963 - 36631089
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgg-gataacttatgaaaatagtttatgacaattttca 129  Q
    |||| |||||| | ||||||||||||| ||||||  |||||||| | ||| ||||||| |||| | |  |||||||||||  || ||||||| |||||||    
T  36630963 taggacctgtttgaattggcttatttgagcttata-actggcattagtttcgtgagacagtttagagggaacttatgaaaccagcttatgacgattttca 36631061  T
Q  130 taagcttttttcaacttattttcataag 157  Q
     |||||||||||  ||||||||||||||    
T  36631062 aaagcttttttctgcttattttcataag 36631089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 46886606 - 46886669
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttggg 96  Q
    ||||||| | ||||||| ||||||| |||||||| ||||||||| ||||| |||||||||||||    
T  46886606 gggcctgcttggattggtttatttgagcttatctgctggcataaattttgagagactgtttggg 46886669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 24684753 - 24684843
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttttt 140  Q
    |||||||| |||||||||||||||||| |||| ||||||  |||||   |||||||||||| |  |||||||||||| || ||| ||||||    
T  24684753 cttatttgagcttatctactggcataagttttttgagacattttggttgaacttatgaaaacaacttatgacaatttgcacaagatttttt 24684843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 25447163 - 25447220
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttg 94  Q
    ||||| |||||| |||||||| | |||||||||| ||||| |||||||||||||||||    
T  25447163 ctgtttggattgacttatttgagtttatctactgacataagttttgtgagactgtttg 25447220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 1820045 - 1820093
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttt 80  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||||||||    
T  1820045 agggcctgtttggattggcttatttgagcttatcttatggcataatttt 1820093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 20194995 - 20195077
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttca 164  Q
    ||||||||||||||| || | |||||||||| |||||||||| || |||| ||| | |||||| ||| |||||||||||||||||    
T  20194995 ttgtgagactgtttgtgagagcttatgaaaacagtttatgac-atattcaaaagttgttttcagctt-ttttcataagctcttca 20195077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 23807995 - 23808106
Alignment:
Q  49 gcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttat 148  Q
    ||||||||||||||||| ||| ||||||    |||||||| |||||||| |||||||||||  || ||||||| || |||| ||  | |||||| |||||    
T  23807995 gcttatttgggcttatccacttgcataaccactgtgagacggtttgggaaaacttatgaaagcagcttatgac-atgttcacaaattgttttcatcttat 23808093  T
Q  149 tttcataagctct 161  Q
    |||||||| ||||    
T  23808094 tttcataaactct 23808106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 33880481 - 33880549
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataat-ttttgtgagactgtttgggataacttatgaaaa 110  Q
    ||||||||||||||| ||||||||| || ||||||  |||| || ||||||||||| ||||||||||||    
T  33880481 ggattggcttatttgagcttatctattgacataatcatttgagaaactgtttgggagaacttatgaaaa 33880549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 43015586 - 43015662
Alignment:
Q  81 tgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||| |||| || |||| ||||| | | ||||| ||||| ||||||| ||||||||||||| ||||||||||    
T  43015586 tgtgagactatttgagaaaactaatgaatacaatttattacaatgttcataaacttttttcaacttgttttcataag 43015662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 43062779 - 43062723
Alignment:
Q  101 cttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||| ||| |||| ||||||||| |||||||||||| ||| ||||||||||    
T  43062779 cttatgaaaacagtatatggcaattttcacaagcttttttcagcttcttttcataag 43062723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 161
Target Start/End: Original strand, 3044266 - 3044301
Alignment:
Q  126 ttcataagcttttttcaacttattttcataagctct 161  Q
    |||||||||| |||||||||||||||||||||||||    
T  3044266 ttcataagctgttttcaacttattttcataagctct 3044301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 4401127 - 4401076
Alignment:
Q  106 gaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||| || |||||||||||| |||||||| |||| ||||||||||||||||    
T  4401127 gaaaacagcttatgacaatttccataagctgtttttaacttattttcataag 4401076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 161
Target Start/End: Complemental strand, 25925805 - 25925770
Alignment:
Q  126 ttcataagcttttttcaacttattttcataagctct 161  Q
    |||||||||| |||||||||||||||||||||||||    
T  25925805 ttcataagctgttttcaacttattttcataagctct 25925770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 42545323 - 42545418
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttt 139  Q
    ||||||||||||||  || ||||| || ||| | |||||| ||||| ||||||| |||| ||||||| || |||||| |||||||| || ||||||    
T  42545323 gattggcttatttgaactcatctagtgacattagttttgttagactatttgggagaactcatgaaaacagcttatgataattttcacaaacttttt 42545418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 42747698 - 42747817
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa-tagtttatgacaattttcataag 133  Q
    ||||||| || ||| |||||||| | |||||||||  ||||| | ||||||||||||||  || ||||||||||||  | ||||||||| | || |||||    
T  42747698 gcctgtttggtttgacttatttgagtttatctacttccataagtattgtgagactgtttttgagaacttatgaaaacaactttatgacattgtttataag 42747797  T
Q  134 cttttttcaacttattttca 153  Q
    || |||||  ||||||||||    
T  42747798 ctgttttctccttattttca 42747817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 154
Target Start/End: Original strand, 16072953 - 16073078
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgttt--gggataacttatgaaaatagtttatgacaattttc 128  Q
    |||| |||||| |||||| |||||||| ||||||||| || ||||| |||||||| ||| |||  | || ||||| | |||| ||||||||||| |||||    
T  16072953 taggacctgtttggattgacttatttgagcttatctaatgacataagttttgtgatactttttttgagagaacttgtaaaaacagtttatgacatttttc 16073052  T
Q  129 ataagcttttttcaacttattttcat 154  Q
    || || ||| |  | |||||||||||    
T  16073053 atgagttttatatagcttattttcat 16073078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 19983860 - 19983807
Alignment:
Q  103 tatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||||  |||||| | |||||||||||||||| |||||||||||||||||    
T  19983860 tatgaaaataacttatgagatttttcataagcttttt-caacttattttcataag 19983807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 21574649 - 21574518
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataat---ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttc 128  Q
    |||| ||||| ||| || ||||||||  |||||||||||||| |||   || | ||||||||||||||| | |||||||||| |  ||||||| || |||    
T  21574649 agggtctgtttggaatgacttatttgaacttatctactggcaaaatcaattgtttgagactgtttgggagagcttatgaaaacaacttatgac-atgttc 21574551  T
Q  129 ataagcttttttcaacttattttcataagctct 161  Q
    |||||||  ||| | ||||||| ||||||||||    
T  21574550 ataagctgcttttagcttatttccataagctct 21574518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 22203559 - 22203462
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||| | ||| | |||||||||||||||| ||| |||||||||||| || |||||||| ||| | |||||||  | ||  |||||||||||||    
T  22203559 gcttatctaccgacattaattttgtgagactgttt-ggagaacttatgaaaacagcttatgacattttacttaagcttaatgcagtttattttcataag 22203462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 134
Target Start/End: Complemental strand, 5436216 - 5436127
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    ||||||||||||| | ||||| |||| ||||| |||||||| ||||||| | | ||||| |||||| |  |||||||| | |||||||||    
T  5436216 attggcttatttgagtttatcaactgtcataagttttgtgacactgttttgaagaacttctgaaaacaacttatgacattgttcataagc 5436127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 159
Target Start/End: Original strand, 25453842 - 25453899
Alignment:
Q  102 ttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagct 159  Q
    ||||||||| || |||||| ||| |||| ||||| |||||| ||||||||||||||||    
T  25453842 ttatgaaaacagcttatgaaaatgttcacaagctcttttcagcttattttcataagct 25453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 28240434 - 28240350
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||| ||||||||||| ||||  || |||||| ||||| || |||||||| | |||| ||||| |||||||||||||||| ||||    
T  28240434 cataagttttgtgagacagtttaagagaacttaggaaaacagcttatgacattgttca-aagctattttcaacttattttcctaag 28240350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 28306159 - 28306118
Alignment:
Q  188 taacttatatgaaaacagtttcagtttattttactatttgtt 229  Q
    ||||||||||||||||||||| | ||||||||||| ||||||    
T  28306159 taacttatatgaaaacagtttgactttattttactttttgtt 28306118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 40122696 - 40122757
Alignment:
Q  62 tatctactggcataatt-tttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    |||||||| |||||| | |||||| |||| ||||| ||| ||||||||||||||||||||||    
T  40122696 tatctactcgcataagtatttgtgcgactatttggaatagcttatgaaaatagtttatgaca 40122757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 161
Target Start/End: Complemental strand, 47513761 - 47513681
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||||||| ||||  ||||||||||| |  ||||||||  || |||||| | ||||||| |||||||||||||||||    
T  47513761 ttgtgagactgttcgggaggacttatgaaaacaagttatgacacgtt-cataagttgttttcaatttattttcataagctct 47513681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 5448586 - 5448542
Alignment:
Q  47 tggcttatttgggcttatctactggcataatttttgtgagactgt 91  Q
    ||||||||||| |||||||||||| ||||| |||||| |||||||    
T  5448586 tggcttatttgagcttatctactgacataagttttgtaagactgt 5448542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 22343669 - 22343589
Alignment:
Q  128 cataagcttttttcaacttattttcataagctcttcataatacggtatagaaataccttataacttatatgaaaacagttt 208  Q
    ||||| ||||||||| || |||| ||||| |||||||  |||   ||| |||| | |||||||||||||||||||||||||    
T  22343669 cataaacttttttcagctcatttgcataatctcttcagtatagcttatggaaacagcttataacttatatgaaaacagttt 22343589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 157
Target Start/End: Original strand, 28795847 - 28795891
Alignment:
Q  113 gtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||| ||||||||||| |||||| |||||| ||||||||||||||    
T  28795847 gtttttgacaattttcttaagctcttttcagcttattttcataag 28795891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 32582888 - 32582776
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| |||||||| | |||||||||  ||||| ||||   ||||||||||||| |||| ||||||| |||    |||| | |||| ||| |||    
T  32582888 tgtttggattgacttatttgagtttatctactaccataagtttt---agactgtttgggagaactcatgaaaacagt----gacattgttcaaaagattt 32582796  T
Q  138 tttcaacttattttcataag 157  Q
    ||||||||||||| ||||||    
T  32582795 tttcaacttatttccataag 32582776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 35959454 - 35959490
Alignment:
Q  117 atgacaattttcataagcttttttcaacttattttca 153  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  35959454 atgacaattttcaaaagcttttttcagcttattttca 35959490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 43046776 - 43046744
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||||||||||||||| ||||||||||||    
T  43046776 ttttgtgagactgtttgggagaacttatgaaaa 43046744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 45264292 - 45264400
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    ||||||||||||| | | |  ||||| ||||| ||| ||||||||| ||| || |||||||||||| |  ||| | || | |||||||||| |||||| |    
T  45264292 attggcttatttgagataacttactgacataagtttagtgagactggttgagagaacttatgaaaacaacttacggcattgttcataagctgttttcacc 45264391  T
Q  145 ttattttca 153  Q
    |||||||||    
T  45264392 ttattttca 45264400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 16937800 - 16937921
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    |||||| ||||||||||||||| ||||||||||| |||||| |||||||||| ||||||| | |||||||||||| || ||||||||| |||||||||||    
T  16937800 cctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagct 16937899  T
Q  136 tttttcaacttattttcataag 157  Q
    ||||||| ||||||||| ||||    
T  16937900 tttttcagcttattttcctaag 16937921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 10640109 - 10639985
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    ||||||||| ||||| ||||||||| | |||||||||| ||||| |||||||| | ||||||||| |||||||||||| || |||||||| |||||||||    
T  10640109 gggcctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataa 10640010  T
Q  133 gcttttttcaacttattttcataag 157  Q
    |||||||  | ||||||||||||||    
T  10640009 gctttttctagcttattttcataag 10639985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 15015986 - 15015887
Alignment:
Q  46 ttggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaact 145  Q
    |||||||||||| |||||||||||| |||||  ||||||||||||||||||| |||||||||||||| || | ||||||||||||||| |||||||||||    
T  15015986 ttggcttatttgagcttatctactgacataagctttgtgagactgtttgggagaacttatgaaaata-ttgaagacaattttcataagattttttcaact 15015888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 29925978 - 29925873
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattt 150  Q
    ||||||||||||||||||| ||| || ||||||||||| |||||||| |||||||||||| || |||||||||| |||||  | ||||||||||||||||    
T  29925978 ttatttgggcttatctactagca-aagttttgtgagaccgtttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattt 29925880  T
Q  151 tcataag 157  Q
    |||||||    
T  29925879 tcataag 29925873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 42500157 - 42500279
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    ||||||||| ||||||| |||||||| |||| |||||| ||||| |||||||||||| ||| ||| |||||||| ||| |  ||| ||||||||||||||    
T  42500157 gggcctgtttggattggtttatttggacttacctactgacataagttttgtgagactcttt-ggagaacttatggaaacaacttacgacaattttcataa 42500255  T
Q  133 gcttttttcaacttattttcataag 157  Q
    || ||||||||||||||||||||||    
T  42500256 gc-tttttcaacttattttcataag 42500279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 42100466 - 42100343
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| |||| |||||||||| ||||||||| |||||||| ||||||| |||||| || || ||||| ||||||||| ||||||||   |||| |||    
T  42100466 ggcctgtttggatgggcttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaacttgtgaaaatagcttatgacatagttcaaaag 42100367  T
Q  134 cttttttcaacttattttcataag 157  Q
     | |||||| ||||||||||||||    
T  42100366 gtgttttcatcttattttcataag 42100343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 153
Target Start/End: Original strand, 7705911 - 7706032
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||| |||||| |||||||| || |||||||| |||||| ||||||||  || ||||||| |||||||||||| || |||||||| ||||||      
T  7705911 agggcctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacc 7706010  T
Q  132 agcttttttcaacttattttca 153  Q
     |||||||||  ||||||||||    
T  7706011 tgcttttttcggcttattttca 7706032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 9202672 - 9202793
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||| |||||||| |||||||| ||||||||| |||||| ||||| ||| ||| |||| ||| ||| || |||||||| | |||||||||| ||| ||    
T  9202672 ggattgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctgtttcca 9202771  T
Q  143 acttattttcataagctcttca 164  Q
     |||||||||||||| ||||||    
T  9202772 gcttattttcataagttcttca 9202793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 12857618 - 12857743
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    ||||| |||| ||||||| ||||||| ||| ||||| || | ||| |||||||| ||||||  ||| |||||||||||| |  ||||||||||||||| |    
T  12857618 agggcttgtttggattggtttatttgagctcatctattgacgtaagttttgtgaaactgttccggagaacttatgaaaacaacttatgacaattttcaca 12857717  T
Q  132 agcttttttcaacttattttcataag 157  Q
    | ||||||||| ||||||||||||||    
T  12857718 accttttttcagcttattttcataag 12857743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 31038414 - 31038333
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttttt 140  Q
    |||||||||| ||||||| |||||||| ||||||| ||| ||||||| ||||||| |||||||| |||||||||||||||||    
T  31038414 gcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 31038333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 140
Target Start/End: Complemental strand, 31047638 - 31047557
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttttt 140  Q
    |||||||||| ||||||| |||||||| ||||||| ||| ||||||| ||||||| |||||||| |||||||||||||||||    
T  31047638 gcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 31047557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 40426921 - 40426797
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    |||||||||  | ||| |||||||| ||||||||| || ||||| |||||||||||||||||||    |||||||||| || ||||| || |||||||||    
T  40426921 gggcctgttttggttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataa 40426822  T
Q  133 gcttttttcaacttattttcataag 157  Q
    |||||||| | ||||||||| ||||    
T  40426821 gcttttttaagcttattttcgtaag 40426797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 142
Target Start/End: Complemental strand, 41419470 - 41419366
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| |||||||| ||| |||||||| ||||| |||||||||| ||||||||||||||| |||||| || |||||||| | ||||| |||| |    
T  41419470 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacattgttcatgagctat 41419371  T
Q  138 tttca 142  Q
    |||||    
T  41419370 tttca 41419366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 151
Target Start/End: Original strand, 12857251 - 12857370
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    ||||| |||| ||||||| ||||||| ||||||||| || | ||| |||||||| ||| ||  ||| |||||||||||| |  ||||||||||||||| |    
T  12857251 agggcttgtttggattggtttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcaca 12857350  T
Q  132 agcttttttcaacttatttt 151  Q
    ||||||||||| ||||||||    
T  12857351 agcttttttcagcttatttt 12857370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 16457938 - 16458013
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    |||||||||||||||||||| |||||||||||| || |||||||| |||||||||||| ||||||  |||||||||    
T  16457938 ttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttca 16458013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 9107236 - 9107122
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||| |||||||| | ||||||| || ||||| |||||||||| ||||||||| |||| ||||||| || ||| ||||||||||| || ||||||||     
T  9107236 ggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaacttttttct 9107137  T
Q  143 acttattttcataag 157  Q
     || |||||||||||    
T  9107136 gctaattttcataag 9107122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 122
Target Start/End: Original strand, 12433086 - 12433176
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    |||||||||| |||||||||||||||  ||||| ||||||||||  |||||||||| ||||||||| || |||||||||||| ||| ||||    
T  12433086 agggcctgtttggattggcttatttgaacttatttactggcataggttttgtgagattgtttgggagaagttatgaaaatagcttacgaca 12433176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 132
Target Start/End: Original strand, 34102225 - 34102326
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| ||| |  |||||||| ||||| ||| |||||||| |||||||| ||||||||||  || |||||||||||| ||| ||||||||||||    
T  34102225 tagggcctgtttggaatcacttatttgagcttaactattggcataagttttgtgacactgtttgggggaatttatgaaaatagcttaagacaattttcat 34102324  T
Q  131 aa 132  Q
    ||    
T  34102325 aa 34102326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 37954833 - 37954720
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgt-gagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttc 141  Q
    ||||||||||||||| |||||||||| |||||||    | | ||||||||| |||| |  ||||||||| || |||||| ||||||||| ||||||||||    
T  37954833 ggattggcttatttgagcttatctacaggcataaaaaatttagagactgttcgggagagtttatgaaaacagcttatgaaaattttcattagcttttttc 37954734  T
Q  142 aacttattttcata 155  Q
    ||||||||||||||    
T  37954733 aacttattttcata 37954720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 43301035 - 43300910
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    ||||| |||| ||||||||||||||| |||||| || |||||||| |||| |||||||||| |||| || |||| |||| ||  ||||||| |||  |||    
T  43301035 agggcatgtttggattggcttatttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagcctatgacattttatata 43300936  T
Q  132 agcttttttcaacttattttcataag 157  Q
    ||| | ||||| ||||||||||||||    
T  43300935 agcatgtttcagcttattttcataag 43300910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 7985114 - 7985002
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaa 143  Q
    |||||||| ||||| | ||||||||||||||||  ||||||||||| ||||||| | |||| ||||| || || ||||  | |||||||||| ||||||     
T  7985114 gattggctaatttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtgacgttgttcataagctgttttcag 7985015  T
Q  144 cttattttcataa 156  Q
    |||||||||||||    
T  7985014 cttattttcataa 7985002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 155
Target Start/End: Original strand, 40438867 - 40438989
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgt-gagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||| || ||||||||||||||||||| |||||||||||||| ||||||  |||| |||||||| ||| | |||||| |  || ||||| |||||||    
T  40438867 agggcctctttggattggcttatttgggctcatctactggcataagttttgtaaagac-gtttgggagaacatttgaaaacaacttgtgacatttttcat 40438965  T
Q  131 aagcttttttcaacttattttcata 155  Q
    |||| |||||||| |||||||||||    
T  40438966 aagc-tttttcaatttattttcata 40438989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 136
Target Start/End: Complemental strand, 3520721 - 3520630
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||||||||||| ||| ||||||| | |||| || ||||||||||||||||| |||||||||||| |  |||||||  |||||||||||||    
T  3520721 attggcttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatgacttttttcataagctt 3520630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 41534589 - 41534506
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgac 121  Q
    |||| |||||| |||||||| ||| |||||||| ||||| |||||||||| ||||||||||||||| |||||| || |||||||    
T  41534589 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgac 41534506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 3735118 - 3735196
Alignment:
Q  79 tttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||| ||||||||| | |||| ||||||| || ||||||||||||||| |||||||||||| ||||| ||||||||    
T  3735118 tttgtgatactgtttggtagaactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataag 3735196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 25461560 - 25461685
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||| ||| ||||||||||||||| |||||||||   |||||| ||| |||| ||||||||| | || |  || |||||| ||||| ||||||||||    
T  25461560 tagggcccgtttggattggcttatttgagcttatctatcagcataagttt-gtgatactgtttggtagaattcttggaaatagcttatggcaattttcat 25461658  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    |||||||  |||||||||||| |||||    
T  25461659 aagctttgatcaacttattttaataag 25461685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 45 - 95
Target Start/End: Complemental strand, 32372756 - 32372706
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgg 95  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  32372756 attggcttatttggccttatctactggcataagttttgtgagactgtttgg 32372706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 141
Target Start/End: Complemental strand, 6521234 - 6521125
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatag-tttatgacaattttcata 131  Q
    ||||||||| |||||| |||||| | ||| | |||||| ||||  |||||||||| ||||||||| ||||||||||||  |  ||||||||||||||| |    
T  6521234 gggcctgtttggattgacttattagagctgaactactgacatatgttttgtgagattgtttgggagaacttatgaaaacggacttatgacaattttcaca 6521135  T
Q  132 agcttttttc 141  Q
    ||||||||||    
T  6521134 agcttttttc 6521125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 15246988 - 15246871
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| ||||| | ||||||| |||||||||||| ||||| |||| | ||| ||||||||| |||||||||||  |  ||||||||   ||||||||    
T  15246988 ggcctgtttggatttgtttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttatgacatcattcataag 15246889  T
Q  134 cttttttcaacttatttt 151  Q
     ||||| |||||||||||    
T  15246888 ttttttgcaacttatttt 15246871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 17258856 - 17258928
Alignment:
Q  91 tttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctcttca 164  Q
    ||||||| ||| ||||||||||| |||||||| | |||||||||| |||||| |||||||||||||||||||||    
T  17258856 tttgggagaacctatgaaaatagcttatgaca-tgttcataagctgttttcagcttattttcataagctcttca 17258928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 39594964 - 39594839
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    ||||| |||| |||||| |||||||| |||||||||| | ||||| |||||| ||| ||||||||| |||||||||||| || | | || ||| ||  ||    
T  39594964 agggcttgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagctgaagataatgttatta 39594865  T
Q  132 agcttttttcaacttattttcataag 157  Q
    || | |||||| ||||||||||||||    
T  39594864 agttgttttcagcttattttcataag 39594839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 7808644 - 7808540
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttatt 149  Q
    ||||||||  ||| |||||| |||||  || | ||||||||||||||| | ||||||||||||| |||| ||| | |||||||||| |||||| ||||||    
T  7808644 cttatttgaacttttctactagcatatgttatttgagactgtttgggagagcttatgaaaatagcttataacattgttcataagctgttttcagcttatt 7808545  T
Q  150 ttcat 154  Q
    |||||    
T  7808544 ttcat 7808540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 32009804 - 32009724
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat-aagcttttttcaacttattttcataag 157  Q
    |||||||||||| ||||| | |||||||||||| || || ||||||||||||| |||||||||| ||||| ||||||||||    
T  32009804 ttttgtgagactatttggaaaaacttatgaaaacagcttgtgacaattttcataaagcttttttgaacttgttttcataag 32009724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 11700313 - 11700195
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| ||||| ||||||||| ||||||| |||||||||| ||||||||||||||||   | |||||||| ||| |  |||||||| | |||||||  ||     
T  11700313 tgtttggatttgcttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacattgttcataa-attg 11700215  T
Q  138 tttcaacttattttcataag 157  Q
    ||||| ||||||||||||||    
T  11700214 tttcatcttattttcataag 11700195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 12425712 - 12425657
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttat 105  Q
    |||||||| |||||||||||| ||||| |||||||||||||||||||| |||||||    
T  12425712 cttatttgagcttatctactgtcataagttttgtgagactgtttgggagaacttat 12425657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 2973467 - 2973557
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataa-tttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    ||||||||||||||  ||||||||| || ||||| |||||||||  ||| || ||| |||||||||||| || ||||||||||||||||||    
T  2973467 ggattggcttatttaagcttatctagtgacataagtttttgtgaacctgcttaggagaacttatgaaaacagcttatgacaattttcataa 2973557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 3932588 - 3932714
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||| ||||| |||||| || ||||| |||||||||    |||||  |||||||||||||||| || |||||   |||| || |||||| |||||||||    
T  3932588 tagggactgtttggattgactaatttgagcttatctaacaacataagctttgtgagactgtttgagaaaacttgcaaaaacagcttatgataattttcat 3932687  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    ||||||||| || ||||||||| ||||    
T  3932688 aagctttttacagcttattttcgtaag 3932714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 157
Target Start/End: Complemental strand, 35446167 - 35446087
Alignment:
Q  76 atttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||||| |||  || |||||  ||||| ||||||||||| ||||| ||||||||||||| ||||||||||||||    
T  35446167 atttttgtgagact-tttaagagaactttcgaaaacagtttatgacatttttcgtaagcttttttcagcttattttcataag 35446087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 36797011 - 36797128
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatag-tttatgacaattttcataag 133  Q
    ||||||| |||||| ||||| || |||| |||||||| || | |||| ||||| ||||| ||| ||||||| |||| |  ||| ||||||||||||||||    
T  36797011 gcctgtttggattgacttatctgagcttctctactggtattagttttatgagaatgttttggagaacttataaaaacaactttctgacaattttcataag 36797110  T
Q  134 cttttttcaacttatttt 151  Q
    ||||||||  ||||||||    
T  36797111 cttttttcggcttatttt 36797128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 706553 - 706501
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaacttatttt 151  Q
    |||||||||||||||||||||||| | |||||||||| |||||| ||||||||    
T  706553 aacttatgaaaatagtttatgacattgttcataagctattttcagcttatttt 706501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 19460330 - 19460429
Alignment:
Q  62 tatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||||||||| ||| |||||||||||| ||| ||||| || ||| |  |||||| | ||||||||||| | ||||| |||||||||||||| |||    
T  19460330 tatctactggcataagtttagtgagactgtttaggagaacttttggaaacaacttatgatatttttcataagc-tgtttcagcttattttcataagttct 19460428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 34736437 - 34736516
Alignment:
Q  29 aatagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaa 108  Q
    |||||||| |||| |||||| |||||||| ||||||||  || ||||| ||||||||||| |||||||| ||||| ||||    
T  34736437 aatagggcatgtttggattgacttatttgagcttatctggtgacataagttttgtgagacagtttgggagaacttttgaa 34736516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 39105611 - 39105496
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgttt-gggataacttatgaaaatagtttatgacaattttcataagcttttttc 141  Q
    |||||| |||||||| | |||||||  || |||| |||| ||||||| ||| |||| || ||||||||| || |||||||| | |||||||||| ||||     
T  39105611 ggattgacttatttgagtttatctaggggtataagttttatgagacttttttgggagaatttatgaaaacagcttatgacattgttcataagctattttt 39105512  T
Q  142 aacttattttcataag 157  Q
    | ||||||||||||||    
T  39105511 agcttattttcataag 39105496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 145
Target Start/End: Complemental strand, 39248250 - 39248143
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    ||||||||| |||| | |||||||| ||||||    | |||||| |||||||||||||||||||| ||||||| |||| || |||||||  | |||||||    
T  39248250 gggcctgtttggatcgacttatttgagcttat----tagcataagttttgtgagactgtttgggagaacttataaaaacagcttatgac-ttgttcataa 39248156  T
Q  133 gcttttttcaact 145  Q
    ||| |||||||||    
T  39248155 gctgttttcaact 39248143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 42582607 - 42582726
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| |||||||| |  |||||| ||  |||| ||||||||| |||||| ||| |||||| ||||||||||||||||| | ||  |||||| |    
T  42582607 tgtttggattgacttatttgagggtatctaatgatataagttttgtgaggctgttttggagaacttaagaaaatagtttatgacattgttagtaagctgt 42582706  T
Q  138 tttcaacttattttcataag 157  Q
     |||| ||||||||| ||||    
T  42582707 attcagcttattttcgtaag 42582726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 1773024 - 1773095
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    ||||| ||||||||||||||  |||||||||||  ||||| |||||||||||||  ||||| ||||||||||||    
T  1773024 ctgtttggattggcttattttagcttatctacttccataagttttgtgagactg--tgggagaacttatgaaaa 1773095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 32942748 - 32942650
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    ||||||| |||||| |||||  | |||| ||||||| ||||| ||||||  |||||||||||| || ||||||| | || |||||||| ||||||||||    
T  32942748 gcctgtttggattgacttatacgagcttttctactgacataagttttgtttgactgtttgggagaatttatgaatacagcttatgacatttttcataag 32942650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 41981644 - 41981694
Alignment:
Q  60 cttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||||| |||| | |||||||||||||||||||| ||||||||||||    
T  41981644 cttatctactagcattagttttgtgagactgtttgggagaacttatgaaaa 41981694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 156
Target Start/End: Complemental strand, 6096693 - 6096580
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||| | ||||||  ||||||||||||||||| |||||||||||| || || | |||||| | ||| || || ||||| | |||||||||| || |||    
T  6096693 ggattgacgtatttgaacttatctactggcataagttttgtgagacttttaggaagaacttacgtaaacagcttgtgacattgttcataagctgttctca 6096594  T
Q  143 acttattttcataa 156  Q
     || ||||||||||    
T  6096593 gctcattttcataa 6096580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 37 - 157
Target Start/End: Complemental strand, 32941622 - 32941503
Alignment:
Q  37 ctgttaggattggcttatttgggctt-atctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    ||||| |||||| |||||| | |||| |||||||| ||||| || |||||||| |||||||| |||||||||||| ||  |||| ||||||| |||| |     
T  32941622 ctgtttggattgacttattagagctttatctactgacataagttctgtgagaccgtttgggagaacttatgaaaacagaatatgccaatttt-ataatc- 32941525  T
Q  136 tttttcaacttattttcataag 157  Q
    |||||||||||| ||| |||||    
T  32941524 tttttcaacttactttaataag 32941503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 41535536 - 41535411
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| ||||||||||||||  |||||||||||   || | |||||||| || |||||||| |||||||||||| |  |||||||| | ||| || |    
T  41535536 ggcctgttcggattggcttatttaagcttatctacttatatcagttttgtgaaacagtttgggagaacttatgaaaacaacttatgacattgttcgtacg 41535437  T
Q  134 cttttttcaacttattttcataagct 159  Q
     | |||||  ||||| ||||||||||    
T  41535436 atgttttccgcttatattcataagct 41535411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 153
Target Start/End: Original strand, 1464946 - 1465054
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    |||| |||||||| ||||| || || |||||| || || ||||||||| |||| |||||||||||| || ||||| || |  ||||||| | |||||| |    
T  1464946 attgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaacagcttatggcattgctcataagttgttttcagc 1465045  T
Q  145 ttattttca 153  Q
    |||||||||    
T  1465046 ttattttca 1465054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 32859673 - 32859756
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    ||||| |||||||| ||||||||| | || ||||||||| |  ||| |||| ||||||||||| ||||||| |||||||||||||    
T  32859673 cataaattttgtgacactgtttggaagaatttatgaaaacaacttacgacatttttcataagc-tttttcagcttattttcataa 32859756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 32861845 - 32861928
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    ||||| |||||||| ||||||||| | || ||||||||| |  ||| |||| ||||||||||| ||||||| |||||||||||||    
T  32861845 cataaattttgtgacactgtttggaagaatttatgaaaacaacttacgacatttttcataagc-tttttcagcttattttcataa 32861928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 11064804 - 11064733
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    ||||||| | ||||||||   ||||| |||||||||| |||||| || ||||||||||||||| ||||||||    
T  11064804 ttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatgaaaatagcttatgaca 11064733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 19460240 - 19460315
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaa 108  Q
    |||||||||  | |||||| ||||| | |||||||||||||||| ||| |||||| ||||||||| ||||| ||||    
T  19460240 gggcctgtttaggttggctcatttgagtttatctactggcataagtttagtgagattgtttgggagaacttttgaa 19460315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 128 - 163
Target Start/End: Complemental strand, 35531200 - 35531165
Alignment:
Q  128 cataagcttttttcaacttattttcataagctcttc 163  Q
    |||||||| |||||||||||||||||||||||||||    
T  35531200 cataagctgttttcaacttattttcataagctcttc 35531165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 7674793 - 7674684
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||||||||||| ||||||||||   | ||| ||||||||||||| |||| | |||||||| ||| |  ||||||| || || ||||| | ||||||    
T  7674793 ggattggcttatttgagcttatctacctacttaagttttgtgagactgcttggaagaacttatggaaacaacttatgac-atgtttataaggtgttttca 7674695  T
Q  143 acttattttca 153  Q
     ||||||||||    
T  7674694 gcttattttca 7674684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 8334661 - 8334603
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||||||||| ||||||||  ||||||||  | |||||| ||||||||||||||    
T  8334661 aacttatgaaaatagcttatgacatatttcataaattgttttcagcttattttcataag 8334603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 22209748 - 22209794
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagact 89  Q
    |||||| |||||||| |||||||||||||||||| |||| |||||||    
T  22209748 ggattgacttatttgagcttatctactggcataagttttctgagact 22209794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 27298244 - 27298138
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    ||||||||||||| ||||||||| |   |||| |||||||||| |||||| || ||||||  |||| |  ||| | ||| ||||||||| ||||||||||    
T  27298244 attggcttatttgagcttatctatttctataagttttgtgagattgtttgagagaacttagaaaaacaacttacgtcaagtttcataagtttttttcaac 27298145  T
Q  145 ttatttt 151  Q
    || ||||    
T  27298144 ttttttt 27298138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 120
Target Start/End: Complemental strand, 41060062 - 41060000
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttg-ggataacttatgaaaatagtttatga 120  Q
    |||||| | ||||||||| |||||||||||||||||   ||||||||||||||||| ||||||    
T  41060062 gcttatatgctggcataagttttgtgagactgtttgacaataacttatgaaaatagcttatga 41060000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 42646757 - 42646699
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||| |||||| |||| ||||||||||||||||| |  |||||| ||||||    
T  42646757 aacttatgaaaaaagtttaggacatttttcataagctttttttagtttatttccataag 42646699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 165
Target Start/End: Original strand, 5284457 - 5284494
Alignment:
Q  128 cataagcttttttcaacttattttcataagctcttcat 165  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  5284457 cataagcttttttcagcttattttcattagctcttcat 5284494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 10771812 - 10771845
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataa 76  Q
    ||||||||||||||| ||||||||||||||||||    
T  10771812 ggattggcttatttgagcttatctactggcataa 10771845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 95
Target Start/End: Original strand, 4014362 - 4014398
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgg 95  Q
    |||||||||||||||||| |||||||| |||||||||    
T  4014362 gcttatctactggcataaattttgtgacactgtttgg 4014398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 11714724 - 11714756
Alignment:
Q  44 gattggcttatttgggcttatctactggcataa 76  Q
    ||||||||||||||||||||||||| |||||||    
T  11714724 gattggcttatttgggcttatctacgggcataa 11714756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 13697764 - 13697796
Alignment:
Q  124 ttttcataagcttttttcaacttattttcataa 156  Q
    |||||||||| ||||||||||||||||||||||    
T  13697764 ttttcataagtttttttcaacttattttcataa 13697796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 138
Target Start/End: Original strand, 29815026 - 29815114
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttt 138  Q
    |||||||  ||||||||||| | |||| |||||||||||| ||| | | |||||| ||||| |  |||| |||||||||| ||||||||    
T  29815026 cttattttagcttatctacttgtataagttttgtgagactatttagaagaacttacgaaaacaacttataacaattttcaaaagctttt 29815114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 161
Target Start/End: Complemental strand, 31688099 - 31688067
Alignment:
Q  129 ataagcttttttcaacttattttcataagctct 161  Q
    ||||||| |||||||||||||||||||||||||    
T  31688099 ataagctattttcaacttattttcataagctct 31688067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 32862629 - 32862712
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    ||||| |||||||| ||||||||| | || ||||||||| |  ||| |||| ||||||||||| |||| || |||||||||||||    
T  32862629 cataaattttgtgacactgtttggaagaatttatgaaaacaacttacgacatttttcataagc-ttttccagcttattttcataa 32862712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 36638850 - 36638775
Alignment:
Q  85 agactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    |||||||| |||| |  |||||||||  || ||||||| | ||||||||||||||||| ||||||| ||||||||||    
T  36638850 agactgttggggaaagtttatgaaaactgtgtatgaca-tgttcataagcttttttcagcttatttccataagctct 36638775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 162
Target Start/End: Original strand, 19302480 - 19302606
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    |||||| | |||| |||||||| |||||||||||| ||||| |||||||||| | ||||||| || ||||||||| || |||||||||||||||||| ||    
T  19302480 cctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaact 19302579  T
Q  136 tttttcaacttattttcataagctctt 162  Q
    |||||||||||||||||||||| ||||    
T  19302580 tttttcaacttattttcataagttctt 19302606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 48470201 - 48470076
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||||||||||||||||||| |||||||||  | ||||| |||| ||||| ||||||||| |||||||||||| || ||||| || ||||||||    
T  48470201 agggcctgttaggattggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcata 48470102  T
Q  132 agcttttttcaacttattttcataag 157  Q
    ||||||||| | ||||| ||||||||    
T  48470101 agcttttttgagcttatgttcataag 48470076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 3927920 - 3928048
Alignment:
Q  29 aatagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttc 128  Q
    |||||||||| || |||| |||||||||| |  |||||||| |||||| |||||||||||| |||| || || || | |||| | |||||||||||||||    
T  3927920 aatagggcctatttggatcggcttatttgaggctatctactagcataagttttgtgagactatttgagagaattttttaaaacaatttatgacaattttc 3928019  T
Q  129 ataagcttttttcaacttattttcataag 157  Q
    |||||||||||||||||||||||||||||    
T  3928020 ataagcttttttcaacttattttcataag 3928048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 420506 - 420392
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||||||| |||| |||| ||||||||| |||  ||||||||||||||||||| |||||||||||| | ||||||||| |||||  |||| |||||||    
T  420506 ggattggcttctttgagcttgtctactggcttaagctttgtgagactgtttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttca 420407  T
Q  143 acttattttcataag 157  Q
    |||||||||||||||    
T  420406 acttattttcataag 420392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 11619077 - 11619196
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| ||||||||||||||| |||||||||||| |||||  ||  ||| || | |||||| || ||||||||| |  |||||||||||||||||||||||    
T  11619077 tgtttggattggcttatttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgacaattttcataagcttt 11619176  T
Q  138 tttcaacttattttcataag 157  Q
    |||||||||| |||||||||    
T  11619177 tttcaacttaatttcataag 11619196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 156
Target Start/End: Original strand, 17944257 - 17944380
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    ||||||||| ||| || |||||||  ||||||||||||||||||  |||||||||||||||  || ||||||| |||| || |||||||| ||||||||     
T  17944257 gggcctgtttggagtgacttatttaagcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttatgacacttttcatat 17944356  T
Q  133 gcttttttcaacttattttcataa 156  Q
    |||||||||| |||| ||||||||    
T  17944357 gcttttttcagcttaatttcataa 17944380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 157
Target Start/End: Original strand, 33601342 - 33601448
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattt 150  Q
    ||||||| ||||||||| |||||||| |||||||||||| |||  || |||||||||||| || |||||||| ||||||||||||||||||| ||||  |    
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaat 33601441  T
Q  151 tcataag 157  Q
    |||||||    
T  33601442 tcataag 33601448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 60 - 157
Target Start/End: Original strand, 19214347 - 19214444
Alignment:
Q  60 cttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||  |||||| |||||||||| ||||||||| |||||||||||| ||   |||||||||||||||| ||| ||||||||||||||||||||    
T  19214347 cttatctacatgcataagttttgtgagattgtttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataag 19214444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 5947396 - 5947280
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| ||||||||||||||| ||||||||| ||| |||| |||| ||||||||||||| | ||||| |||||  || |||||||| |||||||| |    
T  5947396 ggcctgtttggattggcttatttgagcttatctattggtataagttttatgagactgtttggaagaacttttgaaaccagcttatgacatttttcatatg 5947297  T
Q  134 cttttttcaacttattt 150  Q
    |||||| || |||||||    
T  5947296 ctttttacagcttattt 5947280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 21568454 - 21568533
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||||||||||| |||||||||||| || |||| |||||||||||||||| ||||||||||| || ||||||    
T  21568454 ttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataag 21568533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 19022525 - 19022623
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||| ||| | |||||||||| ||||||||| || ||||||||| |  ||||||||||||||||||| | | |||||||||||||||||||    
T  19022525 gcttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataag 19022623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 157
Target Start/End: Original strand, 27863654 - 27863763
Alignment:
Q  48 ggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaactta 147  Q
    |||||||||| ||||||| |||||||||| |||||||||||| |||| || |||||||||||| || ||  || |||||||| || ||||||||| ||||    
T  27863654 ggcttatttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagcttgagaaaattttcaaaaacttttttcagctta 27863753  T
Q  148 ttttcataag 157  Q
    | ||||||||    
T  27863754 tgttcataag 27863763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 154
Target Start/End: Complemental strand, 20526597 - 20526481
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| |||||||| | ||||||| ||| | || ||||||||||||||||| || |||||||||||| ||||||| ||| ||||| |||||| |    
T  20526597 tgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgt 20526498  T
Q  138 tttcaacttattttcat 154  Q
    ||| | |||||||||||    
T  20526497 ttttagcttattttcat 20526481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 59 - 157
Target Start/End: Original strand, 33601967 - 33602065
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||||||||| |||| ||||||| |||  || |||||||||||| || |||||||| ||||||||||| ||||||| ||||  ||||||||    
T  33601967 gcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgacacttttcataagcctttttcagcttaaattcataag 33602065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 3836607 - 3836724
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttc 141  Q
    |||||| |||||||| |||||||||||||| |||    |||||| ||||||||||| ||||||||||||||| ||||||||  || |||||||  | |||    
T  3836607 ggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgaca--ttacataagccgtcttc 3836704  T
Q  142 aacttattttcataagctct 161  Q
    ||||||||||||| ||||||    
T  3836705 aacttattttcattagctct 3836724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 27566676 - 27566732
Alignment:
Q  101 cttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  27566676 cttatgaaaatagcttatgacaactttcacaagcttttttcaacttattttcataag 27566732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 157
Target Start/End: Complemental strand, 34744164 - 34744060
Alignment:
Q  53 atttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttc 152  Q
    ||||| |||||||||||  |||||  ||||||||||||||||| | |||| ||||||| |  ||||||||||||||| |||||||||||  ||||||||     
T  34744164 atttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgacaattttcacaagcttttttcgccttattttt 34744065  T
Q  153 ataag 157  Q
    |||||    
T  34744064 ataag 34744060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 141
Target Start/End: Complemental strand, 45593684 - 45593576
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatct-actggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    |||||||| ||||||||||||||| | |||| | |||| |||||  ||||||||||||||||||| ||||||| |||| |  | |||||| |||||||||    
T  45593684 ggcctgtttggattggcttatttgagtttatattactgacataagctttgtgagactgtttgggagaacttataaaaacatctgatgacatttttcataa 45593585  T
Q  133 gcttttttc 141  Q
    |||||||||    
T  45593584 gcttttttc 45593576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 4970707 - 4970802
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    |||||||| |||||| |||||||| ||||||||  || ||||| | |||||||||||||||||| |||||||||||| |  ||||| |||||||||    
T  4970707 ggcctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatggcaattttca 4970802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 45 - 152
Target Start/End: Complemental strand, 34036061 - 34035954
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    |||| |||||||| |||||||||||| ||||  | ||||||||||  |||| | ||||||||||||||  |||||||| | |||||||| | ||||||||    
T  34036061 attgacttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacattgttcataagttgttttcaac 34035962  T
Q  145 ttattttc 152  Q
    ||||||||    
T  34035961 ttattttc 34035954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 38138474 - 38138517
Alignment:
Q  114 tttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  38138474 tttatgacaattttcataagcttttttcaacttattttcataag 38138517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 39629898 - 39630002
Alignment:
Q  58 ggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||| ||||  ||||| ||||||| | |||||| ||| |||||  ||||| || ||||||||||||||||||||||||||||||||||  |||||||    
T  39629898 ggcttatttactcacataagttttgtgtgtctgtttaggagaactt--gaaaacagcttatgacaattttcataagcttttttcaacttatagtcataag 39629995  T
Q  158 ctcttca 164  Q
     ||||||    
T  39629996 ttcttca 39630002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 21196406 - 21196301
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattt 150  Q
    ||||||| |||||| |||| |||||| |||||||||||||||| | | || ||||| ||| || | ||||||||||||||| |||||||| |||||||||    
T  21196406 ttatttgagcttatatactagcataagttttgtgagactgtttagaagaatttatgcaaacagct-atgacaattttcatatgctttttttaacttattt 21196308  T
Q  151 tcataag 157  Q
    || ||||    
T  21196307 tcttaag 21196301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 153
Target Start/End: Complemental strand, 33678926 - 33678816
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||||||||||   |||||||||| |||||| |||||||||||  ||||||| |||||||||||| |  |||| ||| | ||||| || | ||||||    
T  33678926 ggattggcttatttaaacttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacattgttcatgagatgttttca 33678827  T
Q  143 acttattttca 153  Q
    |||||||||||    
T  33678826 acttattttca 33678816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 36517735 - 36517612
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| |||||   ||||||| ||||| |||||||||||| |||| | ||||||||||||| ||||||| |||| || |  ||||| | |||||    
T  36517735 tagggcctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagct--tgacattgttcat 36517638  T
Q  131 aagcttttttcaacttattttcataa 156  Q
    ||||| ||||||  ||||||||||||    
T  36517637 aagctattttcagtttattttcataa 36517612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 25596189 - 25596061
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||| ||| || |||||||| ||||||||||  ||||||   |||||||| |||| |||| ||| ||| |||| || ||||||||| || | ||    
T  25596189 agggcctgtttggactgacttatttgagcttatctaccagcataagcattgtgagattgttagggaaaacctataaaaacagcttatgacaagttac-ta 25596091  T
Q  132 agcttttttcaacttattttcataagctct 161  Q
    || | |||||||||||||||||||||||||    
T  25596090 agttgttttcaacttattttcataagctct 25596061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 40687463 - 40687538
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||  |||||||||||||  |||||| |||| ||||||| |||||||||||||||| || ||||||||||||    
T  40687463 gcctgttttgattggcttattttagcttatatactagcataatgtttgtgagactgtttgagagaacttatgaaaa 40687538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 48140360 - 48140250
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| ||||||||||||  | | ||||||| |||||||| || ||||||||||||||||| ||  |||||||| || || | |||||||| ||    
T  48140360 tagggcctgtttggattggcttata-gagtttatctattggcataagttatgtgagactgtttgggagaatgtatgaaaacagcttgtaacaatttttat 48140262  T
Q  131 aagcttttttca 142  Q
    ||| ||||||||    
T  48140261 aagattttttca 48140250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 3308205 - 3308290
Alignment:
Q  73 ataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattt-tcataagcttttttcaacttattttcataag 157  Q
    |||| |||| || |||||||||||| ||||| ||||||||| ||||| || ||| |||||||||||||||| |||||||| |||||    
T  3308205 ataagttttatgtgactgtttgggagaacttttgaaaatagcttatgccattttctcataagcttttttcagcttattttaataag 3308290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 38499878 - 38499951
Alignment:
Q  84 gagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||| ||||||| ||||| | |||| || |||||||| |||||||||||||||| || ||||||||||||||    
T  38499878 gagactctttgggagaacttttcaaaacagcttatgacatttttcataagctttttccagcttattttcataag 38499951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 110
Target Start/End: Complemental strand, 46407385 - 46407312
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    ||||||||||||||||| ||| |||||||||||| ||||| ||||| || |||  |||||| ||||||||||||    
T  46407385 ctgttaggattggcttaattgagcttatctactgccataagttttgggaaactacttgggagaacttatgaaaa 46407312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 18765422 - 18765366
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatga 107  Q
    ||||||| ||||||||| || ||||| |||||||||||||||||||| |||||||||    
T  18765422 ttatttgagcttatctattgacataagttttgtgagactgtttgggagaacttatga 18765366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 35056805 - 35056714
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattt 150  Q
    |||||||||||  ||||  ||| || | ||||||||||| ||||||| |||| || |||||||| |||  ||||||||||||||||||||||    
T  35056805 gcttatctactaacatacgtttagtaaaactgtttgggagaacttataaaaacagattatgacactttcaataagcttttttcaacttattt 35056714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 157
Target Start/End: Complemental strand, 49019999 - 49019900
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttat-gaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||| ||| ||||  |||||||||||||||||||| ||||| | ||||| || |||||| |||||||| || ||||||||   |||||||||||||    
T  49019999 gcttatctgctgacatatgttttgtgagactgtttgggagaacttgtggaaaaaagcttatgaaaattttcacaatcttttttcggtttattttcataag 49019900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 109
Target Start/End: Original strand, 18962495 - 18962573
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaa 109  Q
    ||||||||||| ||||||  ||||| |  ||||||||||| ||||| |||||| ||||||||| ||| |||||||||||    
T  18962495 tagggcctgtttggattgagttattcgatcttatctactgacataagttttgttagactgttttggagaacttatgaaa 18962573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 20234604 - 20234546
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataactt 103  Q
    ||||||||||||| |||||| |||| |||||| |||||||||||| ||||||| |||||    
T  20234604 attggcttatttgagcttatatacttgcataagttttgtgagactttttgggagaactt 20234546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 30570911 - 30570969
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||| |||||| || ||||||||||||||||||||||||||||  ||| |||||||||    
T  30570911 aacttgtgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataag 30570969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 44989629 - 44989715
Alignment:
Q  71 gcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct-tttttcaacttattttcataa 156  Q
    |||||| |||||||||||||||||||| |||||||||||| |  || ||||| | |||| ||||| |||| || |||||||||||||    
T  44989629 gcataagttttgtgagactgtttgggaaaacttatgaaaacaacttctgacattgttcacaagctgttttgcagcttattttcataa 44989715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 45338599 - 45338537
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttat 105  Q
    ||||||||||||||| | ||||| ||| |||||| |||| ||||||||||||||| |||||||    
T  45338599 ggattggcttatttgagtttatccactagcataagttttttgagactgtttgggagaacttat 45338537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 122
Target Start/End: Complemental strand, 946843 - 946794
Alignment:
Q  73 ataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    ||||| ||||||||||||||| | | ||||||||||||||||||||||||    
T  946843 ataatatttgtgagactgtttagaagaacttatgaaaatagtttatgaca 946794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 20526882 - 20526967
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||| ||||||||||||||||| || |||| ||||||| || |||||| | | || ||||| | |||||| ||||||||||||||    
T  20526882 cataaattttgtgagactgtttgagagaactgatgaaaacagcttatgagattgtttataagatcttttcagcttattttcataag 20526967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 22283565 - 22283630
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataactt 103  Q
    |||| |||||| ||||||||  ||||||||||| ||||| |||||||||||||||| ||| |||||    
T  22283565 tgtttggattgacttatttgaacttatctactgtcataaattttgtgagactgtttaggagaactt 22283630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 140
Target Start/End: Original strand, 34464153 - 34464242
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttttt 140  Q
    ||||||| | ||||||| || ||||| ||||   ||||| |||||||  ||||||||||| || ||||||||||||||| ||||||||||    
T  34464153 ttatttgagtttatctattgacataaattttacaagactttttgggaggacttatgaaaacagcttatgacaattttcacaagctttttt 34464242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 32410686 - 32410618
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataa-tttttgtgagactgtttgggataacttatgaaaa 110  Q
    ||||||||||||||| ||||||||| ||||||||   ||||||| ||||||| | ||||||||||||||    
T  32410686 ggattggcttatttgagcttatctattggcataagcatttgtgaaactgttttgaataacttatgaaaa 32410618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 153
Target Start/End: Complemental strand, 33128911 - 33128789
Alignment:
Q  29 aatagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttc 128  Q
    |||| |||||||| |||||| |||||||| |||||| | ||  | ||| |||||| ||| ||||||||| || |||||||||  | | |||||||||||     
T  33128911 aatatggcctgtttggattgacttatttgagcttatatgctaacttaagttttgtaagattgtttggga-aagttatgaaaactgctgatgacaatttt- 33128814  T
Q  129 ataagcttttttcaacttattttca 153  Q
    |||||||||||| | ||||||||||    
T  33128813 ataagctttttttagcttattttca 33128789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 39968031 - 39967955
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcat 154  Q
    ||||||||  ||| ||| || |||||||||||| || ||||| || | |||||||||| ||||||||||||||||||    
T  39968031 ttttgtgattctggttgcgagaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcat 39967955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 78 - 133
Target Start/End: Complemental strand, 27288058 - 27288003
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||||||| ||||| | |||||||||||| || |||| ||||||||||||||    
T  27288058 ttttgtgagactatttggaagaacttatgaaaacagcttataacaattttcataag 27288003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 39907958 - 39907887
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataactt 103  Q
    |||||||||| ||||||| | ||||| |||||| ||| || |||| ||||||||||||||||| || |||||    
T  39907958 agggcctgtttggattggttcatttgagcttatatacagggataagttttgtgagactgtttgagagaactt 39907887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 45790397 - 45790463
Alignment:
Q  90 gtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||| ||| ||||||||||||||  ||||||||||||| | |||| ||||||| ||||||||||||||    
T  45790397 gtttcggagaacttatgaaaataacttatgacaatttttaaaagc-tttttcagcttattttcataag 45790463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 105
Target Start/End: Complemental strand, 48507848 - 48507813
Alignment:
Q  70 ggcataatttttgtgagactgtttgggataacttat 105  Q
    ||||||| ||||||||||||||||||||||||||||    
T  48507848 ggcataagttttgtgagactgtttgggataacttat 48507813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 9210967 - 9210913
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttggga 97  Q
    |||||| |||||||| ||||||||||||  |||| |||| |||||||||||||||    
T  9210967 ggattgacttatttgagcttatctactgatataagttttctgagactgtttggga 9210913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Original strand, 40252034 - 40252080
Alignment:
Q  30 atagggcctgttaggattggcttatttgggcttatctactggcataa 76  Q
    |||||||||||| | ||||||||||||| ||||||||||| ||||||    
T  40252034 atagggcctgtttgaattggcttatttgagcttatctactagcataa 40252080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 43694500 - 43694578
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    ||||||| | |||||||||   |||| ||||  |||||||||||||| ||| | |||||||||||||||||||| ||||    
T  43694500 ttatttgagtttatctactaatataagttttacgagactgtttgggagaacctgtgaaaatagtttatgacaatattca 43694578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 161
Target Start/End: Complemental strand, 48131658 - 48131581
Alignment:
Q  83 tgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||||||| | |||||| |||||||  ||||||| |||||||||| || |||||| |||||  |||||||||||    
T  48131658 tgagactgtttggaagaacttacgaaaataagttatgac-attttcataaactattttcagcttatactcataagctct 48131581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 159
Target Start/End: Original strand, 27708804 - 27708837
Alignment:
Q  126 ttcataagcttttttcaacttattttcataagct 159  Q
    |||||||||| |||||||||||||||||||||||    
T  27708804 ttcataagctattttcaacttattttcataagct 27708837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 1422976 - 1422917
Alignment:
Q  101 cttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||||||||||||||||| | | ||||  | ||||||| |||||||||||||||||    
T  1422976 cttatgaaaatagtttatgacaagtct-ataaattgttttcaatttattttcataagctct 1422917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 18865050 - 18865090
Alignment:
Q  117 atgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||| |||| ||||| |||||||||||||||||||||||    
T  18865050 atgacattttttataagtttttttcaacttattttcataag 18865090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 105
Target Start/End: Original strand, 46280210 - 46280266
Alignment:
Q  49 gcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttat 105  Q
    ||||||||| | |||||| ||| ||||  |||||||||||||||||||| |||||||    
T  46280210 gcttatttgagtttatctgctgacatatgttttgtgagactgtttgggagaacttat 46280266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 70)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 15305832 - 15305706
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| ||||||||||||||| ||||||||| || ||||| |||||||| ||||||||| | ||||| ||| || |  ||||| ||||||||||    
T  15305832 tagggcctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcat 15305733  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    ||| |||||||||||||||||||||||    
T  15305732 aagtttttttcaacttattttcataag 15305706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 33 - 157
Target Start/End: Complemental strand, 32592744 - 32592618
Alignment:
Q  33 gggcctgttaggattggcttat--ttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||| ||||||||||||  ||  ||||||||  |||||||| ||||| ||| || ||||||| ||||||||||||||| ||| ||||||||||||    
T  32592744 gggcctgtttggattggcttatatttaagcttatctgatggcataagttttgggagtctatttgggagaacttatgaaaatagcttacgacaattttcat 32592645  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    |||||||| ||||||||||||||||||    
T  32592644 aagcttttctcaacttattttcataag 32592618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 38 - 155
Target Start/End: Original strand, 15757577 - 15757694
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| ||| ||| ||||||| |||||| ||||||||||| ||||||||||||| |||||| || |||||||||  | ||||||||||||||| |||||||    
T  15757577 tgtttggaatggtttatttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttt 15757676  T
Q  138 tttcaacttattttcata 155  Q
    ||||| ||||||||||||    
T  15757677 tttcagcttattttcata 15757694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 59 - 153
Target Start/End: Original strand, 43279467 - 43279563
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggata--acttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    ||||||||||| |||||| |||||||||||||||||||| |  | ||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  43279467 gcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgacaattttcataagcttttttcaacttattttca 43279563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 20952506 - 20952387
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| |||||||| |||||| |||||||| || |||||| ||||| |||  || |||||||||||| |||||||| |||||||||| | ||||    
T  20952506 tgtttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttt 20952407  T
Q  138 tttcaacttattttcataag 157  Q
    ||||||||||||||||||||    
T  20952406 tttcaacttattttcataag 20952387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 137
Target Start/End: Complemental strand, 30331909 - 30331803
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    |||||| |||| |||||| |||||||  |||||||||||| ||||| |||||||||||||||||||| |||||||||||| |  |||||||||||||||     
T  30331909 tagggcttgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttcac 30331810  T
Q  131 aagcttt 137  Q
    |||||||    
T  30331809 aagcttt 30331803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 32 - 150
Target Start/End: Original strand, 41812005 - 41812123
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    ||||| |||| ||||||||||||||| |||||||| | | || || ||| ||||| |||||||||| ||||| |||||| || |||||||| ||||||||    
T  41812005 agggcttgtttggattggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacatttttcata 41812104  T
Q  132 agcttttttcaacttattt 150  Q
    |||||||||||||||||||    
T  41812105 agcttttttcaacttattt 41812123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 11864058 - 11863926
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| |||||||||||||||| ||||| ||||||| |||  | ||||||||||||||||| ||| | |||||| |  |||||||| |||||||    
T  11864058 tagggcctgtttggattggcttatttggtcttatttactggc-taaggtctgtgagactgtttgggagaacatttgaaaacaacttatgacatttttcat 11863960  T
Q  131 aagcttttttcaacttattttcataagctcttca 164  Q
    || ||||||| |||||||||| ||||| ||||||    
T  11863959 aaactttttttaacttattttaataagttcttca 11863926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 26202186 - 26202060
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| |||||  ||||||||  ||||||| ||| ||||| |||||||||| | ||||  | || |||||| || |  ||||||||||||||||    
T  26202186 tagggcctgtttggattaacttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgacaattttcat 26202087  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    |||||||||||||||||||||||||||    
T  26202086 aagcttttttcaacttattttcataag 26202060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 45229665 - 45229543
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagc 134  Q
    ||||||| ||||||| | ||||| |||||||||||||||||| || ||  | || |||||||| |||||||||||| |  |||||||| ||||||| |||    
T  45229665 gcctgtttggattggttgatttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacatttttcattagc 45229566  T
Q  135 ttttttcaacttattttcataag 157  Q
    |||||||| ||||||||||||||    
T  45229565 ttttttcagcttattttcataag 45229543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 33319740 - 33319850
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    ||||||||||||||| |||| |||||||||||||   |||||||||||||||||| ||||| |  |||||| ||||||||  ||| ||||||||||||||    
T  33319740 ggattggcttatttgagcttgtctactggcataa--gttgtgagactgtttgggagaacttttataaatagcttatgaca--tttaataagcttttttca 33319835  T
Q  143 acttattttcataag 157  Q
     ||||||||||||||    
T  33319836 gcttattttcataag 33319850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 44 - 154
Target Start/End: Complemental strand, 36534913 - 36534803
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaa 143  Q
    |||||||||||||| |||||| | ||  ||||| ||||||||||||||||||||||||||||||||| || |||| | | | ||||||| || ||||||     
T  36534913 gattggcttatttgagcttatatgctttcataagttttgtgagactgtttgggataacttatgaaaacagcttataaaattgttcataatctattttcag 36534814  T
Q  144 cttattttcat 154  Q
    |||||||||||    
T  36534813 cttattttcat 36534803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 40682341 - 40682433
Alignment:
Q  65 ctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||| ||||| |||||||||| ||||||||| ||||| | ||||||| |||||||| | |||||||| | |||||||||||||||||||||    
T  40682341 ctactgacataagttttgtgagattgtttgggagaacttgttaaaatagcttatgacattgttcataagttgttttcaacttattttcataag 40682433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 157
Target Start/End: Complemental strand, 449986 - 449879
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttatt 149  Q
    |||||||| ||||||||||| |||||| |||| ||||| |||||||||  |||| |||||| || |||||||| |||||||||||| |||| |||||| |    
T  449986 cttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacatttttcataagctatttttaacttaat 449887  T
Q  150 ttcataag 157  Q
    || |||||    
T  449886 ttgataag 449879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 20926613 - 20926535
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||| ||||| |||  || ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  20926613 ttttgttagactatttaagagaacttatgaaa-tagtttatgacaattttcattagcttttttcaacttattttcataag 20926535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 122
Target Start/End: Original strand, 42659123 - 42659214
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 122  Q
    |||| |||||| || |||||||||||| |||||| ||||||||||| |||||||||||||||||||| || || |||||| || ||||||||    
T  42659123 taggacctgtttgggttggcttatttgagcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttatgaca 42659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 157
Target Start/End: Original strand, 7928211 - 7928337
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttat-gacaattttcat 130  Q
    |||||||||| ||||||||||||||| ||||||||| || ||||| || |||||||||||| |  | ||||| |||||| || |||| |||| | |||||    
T  7928211 agggcctgtttggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatggacattgttcat 7928310  T
Q  131 aagcttttttcaacttattttcataag 157  Q
    ||| | |||||| ||||||||||||||    
T  7928311 aagttgttttcagcttattttcataag 7928337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 12289899 - 12289829
Alignment:
Q  87 actgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||||| ||||  | |||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  12289899 actgtttgggagaactattaaaaacagtttatgacaatattcataagcttttttcaacttattttcataag 12289829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 157
Target Start/End: Complemental strand, 4607082 - 4606957
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||| ||||||||||||||| ||||||||||    |||| |||||||||||| ||||||| ||||| |||||| |  |||||||| | |||||     
T  4607082 agggcctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatg 4606983  T
Q  132 agcttttttcaacttattttcataag 157  Q
    ||||  ||| | ||||||||||||||    
T  4606982 agctgcttttagcttattttcataag 4606957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 110
Target Start/End: Complemental strand, 31744453 - 31744377
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||| |||||||||||||||||||||||||| | ||||| |||| |||||||||||| || ||||| ||||||    
T  31744453 ggcctgtttggattggcttatttgggcttatctaccgacataagttttctgagactgtttgagagaacttttgaaaa 31744377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 156
Target Start/End: Complemental strand, 2142806 - 2142687
Alignment:
Q  37 ctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt 136  Q
    ||||| || ||| |||||||| | ||||||||  |||||| |||| ||||||||||||||| |||||||||||| |  || ||||||| ||||| ||||     
T  2142806 ctgtttggtttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaacaagttgtgacaatgttcattagctg 2142707  T
Q  137 ttttcaacttattttcataa 156  Q
    |||| | |||||||||||||    
T  2142706 tttttagcttattttcataa 2142687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 59 - 218
Target Start/End: Complemental strand, 18066258 - 18066099
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagc 158  Q
    |||||||||||| ||||| |||||||| ||||||| | | |||||||||||| || |||||||| |  ||||||||| |||||| ||||||||| ||||     
T  18066258 gcttatctactgacataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaagt 18066159  T
Q  159 tcttcataatacggtatagaaataccttataacttatatgaaaacagtttcagtttattt 218  Q
    ||| ||  |||   |||  ||| | |||||| |||||||||||||| ||| | |||||||    
T  18066158 tctccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 39659420 - 39659547
Alignment:
Q  30 atagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    |||| ||||||| ||||||||||  ||| |||||||||||| ||||| ||| ||||| |||| || || |||||| ||||| || ||||||||| |||      
T  39659420 atagagcctgtttggattggcttgcttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttatgacaaattttc 39659519  T
Q  130 taagcttttttcaacttattttcataag 157  Q
    ||||||||| ||| ||||| ||||||||    
T  39659520 taagcttttgtcaccttatcttcataag 39659547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 10619132 - 10619258
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| |||||| || ||||| | |||||||||| || || |||||||||||   |||||| |||| ||||||| || ||||| ||||||||      
T  10619132 tagggcctgtttggattgactcatttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatgtcaattttctc 10619231  T
Q  131 aagcttttttcaacttattttcataag 157  Q
     ||| ||||||| ||||||||||||||    
T  10619232 gagcatttttcagcttattttcataag 10619258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 151
Target Start/End: Original strand, 11201363 - 11201413
Alignment:
Q  101 cttatgaaaatagtttatgacaattttcataagcttttttcaacttatttt 151  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  11201363 cttatgaaaatagtttatgacaactttcataagcttttttcaactcatttt 11201413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 38 - 140
Target Start/End: Original strand, 23974412 - 23974514
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| |||||||||| |||||||||| ||| |  || |||||| ||||| ||| |||||||||||| || ||||||||||||||| ||| |||    
T  23974412 tgtttggattgacttatttgggtttatctactgacatgagattagtgagattgttttggagaacttatgaaaacagcttatgacaattttcacaagtttt 23974511  T
Q  138 ttt 140  Q
    |||    
T  23974512 ttt 23974514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 164
Target Start/End: Complemental strand, 24101045 - 24100952
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctt-ttttcaacttattttcataagctcttca 164  Q
    ||||| |||||||||||||||||||| |||||||| ||| |  |||||||||| ||||||||||| ||||| |||| |||| ||||| ||||||    
T  24101045 cataagttttgtgagactgtttgggagaacttatggaaacaccttatgacaatattcataagctttttttctacttgtttttataagttcttca 24100952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 38916224 - 38916349
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||  |||| |||||||||| ||||||||||  |||||  |||||||||  ||||| ||| |||||||||||| || ||| | || ||||||||||    
T  38916224 ggcctgtgtggatcggcttatttgagcttatctaccagcataggttttgtgaggttgtttaggagaacttatgaaaaaagcttacgccacttttcataag 38916323  T
Q  134 cttttttcaacttattttcataagct 159  Q
    ||||||| |  |||||| ||||||||    
T  38916324 cttttttaactttatttccataagct 38916349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 30 - 107
Target Start/End: Original strand, 42868392 - 42868469
Alignment:
Q  30 atagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatga 107  Q
    |||||||||||| |||||| |||||||| ||||||||| |||||||  ||| |||| ||||||||||| |||||||||    
T  42868392 atagggcctgtttggattgccttatttgagcttatctattggcatacgtttcgtgacactgtttgggagaacttatga 42868469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 9174975 - 9174843
Alignment:
Q  29 aatagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttc 128  Q
    |||| ||||| || |||||  |||||||| ||||||||| |||||||| || |||||||||||||| |    ||| | |||| |  |||||||| | |||    
T  9174975 aatatggcctatttggatttacttatttgagcttatctattggcataagttatgtgagactgtttgagggggcttgttaaaacaacttatgacattgttc 9174876  T
Q  129 ataagcttttttcaacttattttcataagctct 161  Q
    ||||||| |||||| ||||||||||||||||||    
T  9174875 ataagctattttcagcttattttcataagctct 9174843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 12195104 - 12194988
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatag-tttatgacaattttcataagctt 136  Q
    |||| ||||||| |||||  ||| || ||| || ||||| ||| || | ||||||||||| ||||  | |||| || |||||||||||||||||||||||    
T  12195104 tgtttggattggtttattcaggcgtaactattgacataagtttcgtcatactgtttgggagaactattaaaaacagctttatgacaattttcataagctt 12195005  T
Q  137 ttttcaacttattttca 153  Q
    |||||||||||||||||    
T  12195004 ttttcaacttattttca 12194988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 1626038 - 1625871
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattt 150  Q
    ||||||| |||||||  ||| ||||| |||||| ||||| |||| || ||||||||||| ||| |||||||||| |||||||| | |||||| || ||||    
T  1626038 ttatttgagcttatcccctgacataagttttgtaagactatttgagagaacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattt 1625939  T
Q  151 tcataagctcttcataatacggtatagaaataccttataacttatatgaaaacagtttcagtttattt 218  Q
    || |||| ||| ||  |||   |||  ||| | ||||||||||||| ||||||| ||| | |||||||    
T  1625938 tcgtaagttctccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaactttattt 1625871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 5745744 - 5745823
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||| |||||||||| | | || ||||||||| || ||||||||||||||||||||||||| ||||| |||||| ||||    
T  5745744 ttttgagagactgtttagaagaatttatgaaaacagcttatgacaattttcataagctttttccaactaattttcctaag 5745823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 13325729 - 13325602
Alignment:
Q  30 atagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    ||||||| |||| ||||  ||||||||| ||||||| | ||  |||| |||| ||||| |||| |||| ||||| |||||| || |||||||| ||  ||    
T  13325729 atagggcttgtttggatcagcttatttgagcttatcaattgatataagttttatgagattgttcgggagaacttttgaaaacagcttatgacatttcaca 13325630  T
Q  130 taagcttttttcaacttattttcataag 157  Q
    ||||||||||||| || |||||||||||    
T  13325629 taagcttttttcagctcattttcataag 13325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 27317533 - 27317458
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    ||||||| |||||| |||||||| |||||||||| | ||||| |||| |||||||||||| || ||||||||||||    
T  27317533 gcctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaa 27317458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 42419948 - 42419853
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    ||||| || |||||| |||||||| | |||||| ||| ||||| |||| ||||||||||||||| |||||| ||||| || |||||||| ||||||    
T  42419948 ggcctttttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatttttca 42419853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 157
Target Start/End: Original strand, 26143559 - 26143678
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    |||||| |||||||||| |||| |||||||||||| ||||| |||  ||||||||||||||| |||||| ||||| |  ||||| || | |||| | | |    
T  26143559 cctgtttggattggcttgtttgagcttatctactgacataaattt--tgagactgtttgggagaacttacgaaaacaacttatgtcattgttcacaggtt 26143656  T
Q  136 tttttcaacttattttcataag 157  Q
     |||||| ||||||||||||||    
T  26143657 attttcagcttattttcataag 26143678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 156
Target Start/End: Complemental strand, 41851670 - 41851568
Alignment:
Q  54 tttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    |||| ||||||||| || || || ||||||||||||| |||||| || ||||| ||| |  |||||||| ||||||||||||||| ||| |||| |||||    
T  41851670 tttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaatttca 41851571  T
Q  154 taa 156  Q
    |||    
T  41851570 taa 41851568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 157
Target Start/End: Complemental strand, 750811 - 750702
Alignment:
Q  48 ggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaactta 147  Q
    |||||||||| | |||||| ||||||||  |||||||||| ||||||  | |||||||||||| || | |||||| | |||||||||| |||| | ||||    
T  750811 ggcttatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacattgttcataagctgttttgagctta 750712  T
Q  148 ttttcataag 157  Q
    ||| ||||||    
T  750711 tttgcataag 750702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 97
Target Start/End: Complemental strand, 3312234 - 3312169
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttggga 97  Q
    ||||| |||| ||||||||||||||| |||||||||||| | ||| ||||||||||||||| ||||    
T  3312234 agggcttgtttggattggcttatttgagcttatctactgacgtaagttttgtgagactgttgggga 3312169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 23955997 - 23956069
Alignment:
Q  83 tgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    ||||||||||||||| ||| || ||||  || ||| |||||||| |||||||||||||||||||||||||||||    
T  23955997 tgagactgtttgggagaacatacgaaataagcttacgacaattt-cataagcttttttcaacttattttcataa 23956069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 36125519 - 36125393
Alignment:
Q  29 aatagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttc 128  Q
    |||||||  |||| ||||| | ||||||| | |||||||||||||||| || ||||||| |||| | ||  |  |||||||| || ||||  ||||||||    
T  36125519 aatagggtatgtttggattcgtttatttgagtttatctactggcataagttctgtgagagtgttagagaata--tatgaaaacagcttattgcaattttc 36125422  T
Q  129 ataagcttttttcaacttattttcataag 157  Q
     ||||||||||| ||||||||||||||||    
T  36125421 gtaagctttttttaacttattttcataag 36125393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 41170763 - 41170678
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataattt-ttgtgagactgtttgggataacttatgaaaatagtttatga 120  Q
    |||||| ||||||||||||||| | |||||||||  |||||    |||||||||| ||||| ||||||||||||||||||||||||    
T  41170763 cctgtttggattggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaaatagtttatga 41170678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 15370238 - 15370302
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataa-tttttgtgagactgtttggga 97  Q
    |||||||| |||||| |||||||| ||||||||||||||||||   |||||||||||||||||||    
T  15370238 ggcctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttggga 15370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 161
Target Start/End: Original strand, 28677626 - 28677701
Alignment:
Q  85 agactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||||||| |||||||||||| || ||||||| ||||||||||| | |||||  ||||||| ||||||||||    
T  28677626 agactgtttgggagaacttatgaaaacagcttatgac-attttcataagttgttttcggcttatttccataagctct 28677701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 33981231 - 33981155
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||||||||| ||  | ||||||||||||  | ||||||||  ||||||||||||||||||||||| ||||||||    
T  33981231 ttgtgagactgtctgaaaaaacttatgaaaacggcttatgacacatttcataagcttttttcaacttaatttcataa 33981155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 153
Target Start/End: Original strand, 12464400 - 12464507
Alignment:
Q  46 ttggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaact 145  Q
    |||||||||||| |  ||||||||  ||||| |||||||||| ||||||||| | ||||  |||| || ||| ||||  ||||| |||||||||||| ||    
T  12464400 ttggcttatttgagtgtatctactaacataagttttgtgagaatgtttgggacatcttacaaaaaaagcttacgacatatttcacaagcttttttcagct 12464499  T
Q  146 tattttca 153  Q
    ||||||||    
T  12464500 tattttca 12464507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 20933885 - 20933787
Alignment:
Q  30 atagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    ||||||| |||| |||||  |||||||| ||||||||| | ||| || |||||| |     ||||||| |||||||||||| ||||||||||||||||||    
T  20933885 atagggcatgtttggattttcttatttgagcttatctattagcagaagttttgtta-----tttgggagaacttatgaaaacagtttatgacaattttca 20933791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 157
Target Start/End: Original strand, 41293122 - 41293201
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||| ||||||| ||||||| |||| || |||||||| ||  |||||||| |||||| ||||| ||||||||    
T  41293122 ttttgtgagactatttgggagaacttataaaaacagcttatgacatttcgcataagctgttttcagcttatattcataag 41293201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 31561666 - 31561780
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttca 142  Q
    |||||| |||||||| | |||||||||  ||||| |||||| | ||||||||||| ||||| |||||| ||  ||||||  |||||||||| || ||| |    
T  31561666 ggattgacttatttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaacagcatatgacgtttttcataagattgtttaa 31561765  T
Q  143 acttattttcataag 157  Q
     |||| |||||||||    
T  31561766 gcttactttcataag 31561780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 21828102 - 21828041
Alignment:
Q  49 gcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||||  ||||||||||||||||| |||||||||||||||| | | ||||| ||||||    
T  21828102 gcttatttgaccttatctactggcataagttttgtgagactgtttagaagaacttttgaaaa 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 16451226 - 16451154
Alignment:
Q  81 tgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    |||||||| |||||||| |||||||||||| |  |||||||| | ||||| |||| |||||| ||||||||||    
T  16451226 tgtgagaccgtttgggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttca 16451154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 19608575 - 19608667
Alignment:
Q  61 ttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    |||||||||| ||||  |||| |||||||||||| || ||||||| || | || |||||||| | |||||||||| |||| | ||||||||||    
T  19608575 ttatctactgacataggttttatgagactgtttgcgagaacttataaacacagcttatgacattcttcataagctattttgagcttattttca 19608667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 43570503 - 43570444
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagct 159  Q
    |||||||||||| || |||||||| | ||||||||||||||| | ||||||||||||||||    
T  43570503 aacttatgaaaacagcttatgacattgttcataagctttttt-agcttattttcataagct 43570444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 42420219 - 42420262
Alignment:
Q  115 ttatgacaattttcataagcttttttcaac-ttattttcataag 157  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  42420219 ttatgacaattttcattagcttttttcaactttattttcataag 42420262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 43530073 - 43530147
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcata 155  Q
    |||||||| || |||||| |||||||||||| || ||||||| || |||| ||||| |||||||||||||| ||||    
T  43530073 ttgtgagagtgcttgggagaacttatgaaaacagattatgac-atgttcacaagctattttcaacttatttccata 43530147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 25800938 - 25800869
Alignment:
Q  86 gactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||||||||| ||||||| |||| | ||  ||||| | |||||||||| ||||||||||||||||||||    
T  25800938 gactgtttgggagaacttattaaaacaattc-tgacattgttcataagctattttcaacttattttcataa 25800869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 157
Target Start/End: Complemental strand, 26626975 - 26626905
Alignment:
Q  87 actgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||| ||||| |||||| |||||||| |||||||| | ||||||| || ||||||  |||||||||||||    
T  26626975 actgtatgggagaacttacgaaaatagcttatgacattgttcataatctgttttcaggttattttcataag 26626905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 41170601 - 41170544
Alignment:
Q  101 cttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagct 159  Q
    ||||||||||||||||||||| || || ||||||| |||| | ||||||||||||||||    
T  41170601 cttatgaaaatagtttatgac-atgtttataagctattttaagcttattttcataagct 41170544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 43529827 - 43529900
Alignment:
Q  87 actgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||||| || ||||||||| || ||||| || | |||||||||| ||||||  |||||||||||||||||    
T  43529827 actgtttgggagaatttatgaaaacagcttatgcca-tgttcataagctattttcagtttattttcataagctct 43529900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 72 - 157
Target Start/End: Original strand, 7035520 - 7035605
Alignment:
Q  72 cataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||| |||||||||||||||| | | |||||||| ||| || ||||||||   |||||||| | |||||  ||||||||||||||    
T  7035520 cataagttttgtgagactgttttgaagaacttatggaaacagcttatgacacagttcataaggtgttttccgcttattttcataag 7035605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 161
Target Start/End: Original strand, 12313135 - 12313215
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    |||||||| ||||||||| || ||||||||| || ||||| || | |||||||| |  ||||| ||||||||||||||||||    
T  12313135 ttgtgagattgtttgggagaatttatgaaaacagcttatgcca-tgttcataagttgatttcaccttattttcataagctct 12313215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 29936186 - 29936141
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataa 76  Q
    ||||||||||| ||||||||||||||| ||| |||| |||||||||    
T  29936186 tagggcctgtttggattggcttatttgagctcatcttctggcataa 29936141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 1633431 - 1633491
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||| | ||||||||| |||||| |||||| | |||||| |||| ||||||||||||    
T  1633431 cttatttgagtttatctactagcataagttttgttatactgttagggagaacttatgaaaa 1633491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 10258807 - 10258715
Alignment:
Q  61 ttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttca 153  Q
    ||||||||| |||||| |||| |  || ||||||||  ||||| |  ||| || |||||||| || ||||||||||||||||| |||||||||    
T  10258807 ttatctacttgcataagttttatatgaatgtttgggtaaacttttttaaacagcttatgacagttctcataagcttttttcaatttattttca 10258715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Original strand, 27237782 - 27237822
Alignment:
Q  35 gcctgttaggattggcttatttgggcttatctactggcata 75  Q
    ||||||| ||||||||||||||| |||||||||||| ||||    
T  27237782 gcctgttcggattggcttatttgtgcttatctactgacata 27237822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 29628673 - 29628733
Alignment:
Q  50 cttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||||||| |||||||||||| ||||| ||||||||||| || ||| | ||||||| ||||    
T  29628673 cttatttgagcttatctactgtcataagttttgtgagacagtctggaagaacttataaaaa 29628733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 37053599 - 37053563
Alignment:
Q  184 cttataacttatatgaaaacagtttcagtttatttta 220  Q
    ||||||||||||||||||||||||| | |||||||||    
T  37053599 cttataacttatatgaaaacagtttgactttatttta 37053563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 39073646 - 39073690
Alignment:
Q  63 atctactggcataatttttgtgagactgtttgggataacttatga 107  Q
    |||||| | |||||||||||||||||||||||| | |||||||||    
T  39073646 atctaccgacataatttttgtgagactgtttggaagaacttatga 39073690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 43985270 - 43985234
Alignment:
Q  128 cataagcttttttcaacttattttcataagctcttca 164  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  43985270 cataagcttttttcaacttgtttccataagctcttca 43985234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 22386 - 22263
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||||||||| ||||||||  ||||||||| |||||||| ||||||||| |||||  ||| |||||||  ||| || |||||||||||||| ||||    
T  22386 ggcctgttaggatttgcttattttagcttatctaatggcataagttttgtgagcctgttccggaaaacttatagaaacagcttatgacaattttcgtaag 22287  T
Q  134 cttttttcaacttattttcataag 157  Q
    ||||||||| ||||||||||||||    
T  22286 cttttttcagcttattttcataag 22263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 848146 - 848022
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||||||||| |||||| |||||||| ||||||||| | |||||| |||||||||||||||||| | ||||||| ||||  | |||||||| ||||| |    
T  848146 tagggcctgtttggattgccttatttgagcttatcta-tagcataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttctt 848048  T
Q  131 aagcttttttcaacttattttcataa 156  Q
    |||||||||||| |||||||||||||    
T  848047 aagcttttttcagcttattttcataa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 36 - 163
Target Start/End: Complemental strand, 34430867 - 34430741
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    |||||| ||||||||||||||| ||||||| ||||  |||| |||||| ||| |||||||||||| ||||||||| |  ||||||||||||||||| |||    
T  34430867 cctgtttggattggcttatttgagcttatcaactga-ataagttttgtaagattgtttgggataatttatgaaaacaacttatgacaattttcatatgct 34430769  T
Q  136 tttttcaacttattttcataagctcttc 163  Q
    ||||  |||||||||||||||| |||||    
T  34430768 ttttcaaacttattttcataagttcttc 34430741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 153
Target Start/End: Complemental strand, 30926674 - 30926556
Alignment:
Q  34 ggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataag 133  Q
    |||||||| || |||||||||||| |||||| | ||||||||| |||  ||||||||||||| | |||||||||||| || ||||||||||||||||  |    
T  30926674 ggcctgtttggtttggcttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatgacaattttcat-gg 30926576  T
Q  134 cttttttcaacttattttca 153  Q
     |||||||||||| ||||||    
T  30926575 gttttttcaactttttttca 30926556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 21405066 - 21405179
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    ||||| ||||| |||||| |||||||| |||||| ||||| ||||| |||||||||| | ||||||  |||| |||||||||| |||||| | ||||||     
T  21405066 tagggtctgtttggattgacttatttgagcttatatactgacataagttttgtgagaatatttgggggaactaatgaaaataggttatgatagttttcaa 21405165  T
Q  131 aagcttttttcaac 144  Q
    ||||||||||||||    
T  21405166 aagcttttttcaac 21405179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 155
Target Start/End: Complemental strand, 31813292 - 31813195
Alignment:
Q  58 ggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcata 155  Q
    ||||||| ||||||||||| |||||||||||| ||||||| ||||||||||||| | |||||| | | |||||||||  |||||| ||||||||||||    
T  31813292 ggcttatttactggcataagttttgtgagactatttgggagaacttatgaaaattgcttatgagattgttcataagccgttttcagcttattttcata 31813195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 30536633 - 30536543
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||||||||||| ||| ||||||||||||||||||||  |||||||||||||| ||||||       || ||||||||||||||||||||||||||    
T  30536633 gcttatctactggcgtaagttttgtgagactgtttgggaggacttatgaaaatagcttatga-------cagaagcttttttcaacttattttcataa 30536543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 157
Target Start/End: Complemental strand, 2735177 - 2735101
Alignment:
Q  81 tgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||||| |||||||||||||||  | |||||||| |||||||||||| |||||  ||||||||||||||    
T  2735177 tgtgagactgtttgagataacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataag 2735101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 164
Target Start/End: Original strand, 34882338 - 34882466
Alignment:
Q  36 cctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    |||||| |||||| |||||||   |||||||||| | |||| ||||||  |||||||| ||| || |||||||||||  |||||||| | |||||||| |    
T  34882338 cctgtttggattgacttatttcatcttatctactagtataagttttgttggactgtttaggagaatttatgaaaataagttatgacattgttcataagtt 34882437  T
Q  136 tttttcaacttattttcataagctcttca 164  Q
     ||||| ||||||||||||||| ||||||    
T  34882438 gttttccacttattttcataagttcttca 34882466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 4163304 - 4163205
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||  ||||||||| | || ||| |||||||| |  ||||||||||||| || ||||||    
T  4163304 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttttatgagcttt 4163205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 4224925 - 4224826
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||  ||||||||| | || ||| |||||||| |  ||||||||||||| || ||||||    
T  4224925 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgacaatttttatgagcttt 4224826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 35070568 - 35070688
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataa 132  Q
    ||||||||| ||||||||||||||| ||||| ||||||||| || | |||||||||||     || |||||| ||||| || ||||||||||||||| ||    
T  35070568 gggcctgtttggattggcttatttgagcttacctactggcacaagtcttgtgagactga----gagaacttacgaaaacagcttatgacaattttcacaa 35070663  T
Q  133 gcttttttcaacttattttcataag 157  Q
    ||||||||   ||| ||||||||||    
T  35070664 gcttttttgggcttgttttcataag 35070688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 31623709 - 31623599
Alignment:
Q  30 atagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttca 129  Q
    |||||| ||||| | |||| ||||||||   |||||||||||| ||| |||| ||||   |||||||| ||||| ||||||||| |||||||||||||||    
T  31623709 atagggtctgtttgaattgacttatttgaatttatctactggcctaagttttttgaggtggtttgggagaacttctgaaaatagcttatgacaattttca 31623610  T
Q  130 taagctttttt 140  Q
     ||||||||||    
T  31623609 caagctttttt 31623599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 9559460 - 9559580
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaatttt---cataagc 134  Q
    |||| ||||||||||| ||| ||||||||| |||||||| |||  ||||||| ||||||| |||||||||||| |  |||||||| | ||   | |||||    
T  9559460 tgtttggattggcttagttgcgcttatctattggcataaattt--tgagactatttgggagaacttatgaaaacaacttatgacattgttctgcgtaagc 9559557  T
Q  135 ttttttcaacttattttcataag 157  Q
    | |||||||||||||||||||||    
T  9559558 tgttttcaacttattttcataag 9559580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 157
Target Start/End: Original strand, 20368127 - 20368218
Alignment:
Q  65 ctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||| ||||| |||||| ||||| ||||||| |||||||||||| |  ||||||| || ||||||||||  ||||||||||||||||||||    
T  20368127 ctactgacataagttttgtaagactatttgggagaacttatgaaaacaacttatgac-atgttcataagctagtttcaacttattttcataag 20368218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 45 - 154
Target Start/End: Complemental strand, 2455132 - 2455026
Alignment:
Q  45 attggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaac 144  Q
    ||||| |||||||  ||||||||||  ||||| |||||||||||||||||||| ||||| ||||||    |||||||| | ||||||| || |||||| |    
T  2455132 attggtttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaa---cttatgacattgttcataacctgttttcagc 2455036  T
Q  145 ttattttcat 154  Q
    ||||||||||    
T  2455035 ttattttcat 2455026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 58 - 157
Target Start/End: Original strand, 9912130 - 9912229
Alignment:
Q  58 ggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||||||||||  |||| ||||| | |||||||| ||| |||||||||||  || |||||||| | |||||||||| |||| | ||||||||||||||    
T  9912130 ggcttatctactgatataagttttgggcgactgtttcggagaacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataag 9912229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 34404636 - 34404762
Alignment:
Q  29 aatagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttc 128  Q
    ||||||| ||||| |||||  |||||||| | ||||| |||| ||||| ||||||| || | ||||||| ||||||||||||||  ||||||| || | |    
T  34404636 aataggggctgtttggatttacttatttgagtttatcaactgacataagttttgtgtgagtctttgggagaacttatgaaaatatcttatgac-atgtac 34404734  T
Q  129 ataagcttttttcaacttattttcataa 156  Q
    ||||||| |||||| | |||||||||||    
T  34404735 ataagctgttttcagcatattttcataa 34404762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 161
Target Start/End: Complemental strand, 30641902 - 30641773
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcata 131  Q
    |||||||||| | ||||||||||||| | |||||||   ||||   |||||||||| ||| || || |||||||||||| ||||||  ||| ||||||||    
T  30641902 agggcctgtttgaattggcttatttgagtttatctatatgcatgcattttgtgagattgtgtgagagaacttatgaaaacagtttacaacatttttcata 30641803  T
Q  132 agcttttttcaacttattttcataagctct 161  Q
    |||| ||| | | |||| ||||||||||||    
T  30641802 agctgtttcctaattatattcataagctct 30641773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 10645304 - 10645376
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaa 110  Q
    |||| ||||||||| ||||| | ||||||| || ||||| |||||| ||||||||||||| ||||||||||||    
T  10645304 tgtttggattggctaatttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaa 10645376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 19376703 - 19376663
Alignment:
Q  79 tttgtgagactgtttgggataacttatgaaaatagtttatg 119  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  19376703 tttgtaagactgtttgggataacttatgaaaatagtttatg 19376663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 35069525 - 35069585
Alignment:
Q  32 agggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtt 92  Q
    |||||||||| | ||||||||||||| |||||||||||| ||||| |||||| ||||||||    
T  35069525 agggcctgtttgtattggcttatttgagcttatctactgacataagttttgtaagactgtt 35069585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 156
Target Start/End: Complemental strand, 6536683 - 6536648
Alignment:
Q  121 caattttcataagcttttttcaacttattttcataa 156  Q
    ||||||||||||||||||||||||||||||||||||    
T  6536683 caattttcataagcttttttcaacttattttcataa 6536648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 132
Target Start/End: Complemental strand, 6538674 - 6538571
Alignment:
Q  29 aatagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttc 128  Q
    ||||||||||||| |||||| |||||||| | |||| || |||||||| ||| ||||||||||| |||| || | ||||||| || |||||   ||||||    
T  6538674 aatagggcctgtttggattgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagcttatggtgattttc 6538575  T
Q  129 ataa 132  Q
    ||||    
T  6538574 ataa 6538571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 24476692 - 24476641
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaacttattt 150  Q
    |||||||||||||||||||| ||| | |||||||||| ||||||||||||||    
T  24476692 aacttatgaaaatagtttattacattgttcataagctattttcaacttattt 24476641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 14929785 - 14929739
Alignment:
Q  114 tttatgacaattttcataagcttttttcaacttattttcataagctc 160  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||||    
T  14929785 tttatgacaattttcataagcttttttaaagttattttcacaagctc 14929739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 154
Target Start/End: Original strand, 9559364 - 9559457
Alignment:
Q  61 ttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcat 154  Q
    ||||||| |||||||| |||||||||||||||| ||| || ||||||||| || |||  ||| | |||||||||| ||||| | ||||| ||||    
T  9559364 ttatctattggcataagttttgtgagactgtttaggagaagttatgaaaacagcttacaacattgttcataagctgttttcgatttattctcat 9559457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 31624179 - 31624123
Alignment:
Q  99 aacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||||||||| || |||||||| | |||||||||| ||||||||||||||||||||    
T  31624179 aacttatgaaaacagcttatgaca-tgttcataagctgttttcaacttattttcataa 31624123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 9763644 - 9763592
Alignment:
Q  105 tgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    |||||| || |||||||| |||| ||||||||||||||||||| |||||||||    
T  9763644 tgaaaacagcttatgacacttttgataagcttttttcaacttaatttcataag 9763592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 18076290 - 18076230
Alignment:
Q  102 ttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataagctctt 162  Q
    ||||||||  || |||||||||||||||| |||| |||||||||||| |||||||| ||||    
T  18076290 ttatgaaaccagcttatgacaattttcatgagctgttttcaacttatattcataagttctt 18076230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 157
Target Start/End: Complemental strand, 18611184 - 18611104
Alignment:
Q  78 ttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttt-tcaacttattttcataag 157  Q
    |||||||| |||||||| ||||||||||||||| |  |||| ||| ||||| | |||||||| |||||||| |||||||||    
T  18611184 ttttgtgacactgtttgagataacttatgaaaacaacttataacacttttcctcagctttttctcaacttaatttcataag 18611104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 19411491 - 19411587
Alignment:
Q  61 ttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||| |||||| |||| |  || ||||||||| ||||| || ||| || |||||||| || |||||||||||||||  ||||||||| ||||    
T  19411491 ttatctacttgcataagttttatatgaatgtttgggagaacttttgtaaacagcttatgacagttctcataagcttttttcggcttattttcgtaag 19411587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 163
Target Start/End: Original strand, 23063475 - 23063579
Alignment:
Q  60 cttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttc-ataagcttttttcaacttattttcataagc 158  Q
    ||||||||||||||||| |||||  | ||||||| | | ||||||||||||||| ||||| || | ||| |||||||  | |||||||| |||||||||     
T  23063475 cttatctactggcataagttttgatacactgtttagaagaacttatgaaaatagcttatgccattgttcaataagctactctcaacttaatttcataagt 23063574  T
Q  159 tcttc 163  Q
    |||||    
T  23063575 tcttc 23063579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 29659996 - 29660092
Alignment:
Q  43 ggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttt 139  Q
    |||||| |||||| | ||||||||| ||| |||  |||||||| ||| ||||||| | ||||| |||| || |||||||| ||| ||||||||||||    
T  29659996 ggattgacttattcgagcttatctattggaatacattttgtgatactatttgggacagcttataaaaacagcttatgacattttccataagcttttt 29660092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 156
Target Start/End: Original strand, 34430447 - 34430498
Alignment:
Q  105 tgaaaatagtttatgacaattttcataagcttttttcaacttattttcataa 156  Q
    |||||| || |||||||| || |||||||||||||||| |||||||||||||    
T  34430447 tgaaaacagcttatgacatttatcataagcttttttcagcttattttcataa 34430498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 35099187 - 35099073
Alignment:
Q  38 tgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttt 137  Q
    |||| |||||| |||||||| || |||| |  || |||| |||| |||| |||||||||| || ||| ||||| || | |||||| ||||| |||| |||    
T  35099187 tgtttggattgacttatttgagcctatccatcggtataagttttctgaggctgtttgggagaatttaggaaaacagctaatgacatttttcgtaag-ttt 35099089  T
Q  138 tttcaacttattttca 153  Q
    ||||||||||||||||    
T  35099088 tttcaacttattttca 35099073  T

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Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 161
Target Start/End: Original strand, 35070475 - 35070509
Alignment:
Q  127 tcataagcttttttcaacttattttcataagctct 161  Q
    ||||||||| |||||||||||||||||||||||||    
T  35070475 tcataagctgttttcaacttattttcataagctct 35070509  T

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Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 157
Target Start/End: Complemental strand, 769246 - 769170
Alignment:
Q  80 ttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagcttttttcaacttattttcataag 157  Q
    ||||||||||||||||   |||||||||||| |  |||||||| | |||||||||| ||||||||||| |||| ||||    
T  769246 ttgtgagactgtttggatgaacttatgaaaacatcttatgaca-tgttcataagctgttttcaacttactttcttaag 769170  T

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Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 6647467 - 6647415
Alignment:
Q  108 aaatagtttatgacaattttcataagcttttttcaacttattttcataagctct 161  Q
    |||||| |||||||| | |||||||| | |||||||||||||||||||||||||    
T  6647467 aaatagcttatgaca-tgttcataagatgttttcaacttattttcataagctct 6647415  T

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Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 7148727 - 7148694
Alignment:
Q  128 cataagcttttttcaacttattttcataagctct 161  Q
    |||||||| |||||||||||||||||||||||||    
T  7148727 cataagctattttcaacttattttcataagctct 7148694  T

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Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 220
Target Start/End: Complemental strand, 10154226 - 10154190
Alignment:
Q  184 cttataacttatatgaaaacagtttcagtttatttta 220  Q
    ||||||||||||||||||||||||| | |||||||||    
T  10154226 cttataacttatatgaaaacagtttgactttatttta 10154190  T

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Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 140
Target Start/End: Complemental strand, 24982834 - 24982754
Alignment:
Q  60 cttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttttt 140  Q
    ||||||||||  ||||| |||||||||||||||| ||| ||| | ||| || || |||||||| |||| || |||||||||    
T  24982834 cttatctactaacataagttttgtgagactgttttggagaacatttgagaacagcttatgacatttttaatgagctttttt 24982754  T

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Target: scaffold0050 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 164
Target Start/End: Complemental strand, 58900 - 58767
Alignment:
Q  31 tagggcctgttaggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 130  Q
    |||||||| || ||||| ||||||||| ||||||||  |||   || ||||||| ||||||||  || || ||||||||  |||||||||||||||||||    
T  58900 tagggcctatttggattagcttatttgagcttatcttatggtggaagttttgtgtgactgtttttgaaaatttatgaaagcagtttatgacaattttcat 58801  T
Q  131 aagcttttttcaacttattttcataagctcttca 164  Q
    ||||||||||||||||| ||||||||| ||||||    
T  58800 aagcttttttcaacttaatttcataagttcttca 58767  T

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Target: scaffold0528 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 140
Target Start/End: Original strand, 922 - 1003
Alignment:
Q  59 gcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagctttttt 140  Q
    |||||||||| ||||||| |||||||| ||||||| ||| ||||||| ||||||| |||||||| |||||||||||||||||    
T  922 gcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacatttttcataagctttttt 1003  T

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Target: scaffold0057 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 107
Target Start/End: Complemental strand, 44178 - 44115
Alignment:
Q  44 gattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatga 107  Q
    |||||||||||||| || || |||||||||||  |||||||||||||||||||| |||||||||    
T  44178 gattggcttatttgagcgtacctactggcatatgttttgtgagactgtttgggagaacttatga 44115  T

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Target: scaffold0057; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 24759 - 24675
Alignment:
Q  51 ttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcataagct 135  Q
    ||||||| || |||||| |||||||  |||||||||||||||||||| ||||||| |||| || |||||||| | |||| |||||    
T  24759 ttatttgagcgtatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagcttatgacattcttcaaaagct 24675  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 52051 - 52004
Alignment:
Q  115 ttatgacaattttcataagcttttttcaacttattttcataagctctt 162  Q
    |||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  52051 ttatgataattttcaaaagcttttttcaacttattttcataagttctt 52004  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 159887 - 159923
Alignment:
Q  33 gggcctgttaggattggcttatttgggcttatctact 69  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  159887 gggcctgtttggattggcttatttgagcttatctact 159923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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