View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11410_high_3 (Length: 280)
Name: NF11410_high_3
Description: NF11410
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11410_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 11 - 262
Target Start/End: Complemental strand, 46893410 - 46893153
Alignment:
| Q |
11 |
cagagagggatatagagtgtatgcttaattattaagtataagcatctactttgttgttgttttcatggttaataaaagcactagtaaagaataaaatctt |
110 |
Q |
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| T |
46893410 |
cagagagggatatagagtatatgcttaattattaagtataagcatctactttgttgttgttttcatggttaataaaagcactagtaaagaataaaatctt |
46893311 |
T |
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| Q |
111 |
gaagtgatgaatgataaaagacacttcttgtgttgtttagacacaaatttgttgtttcagtagaccgtttttggtataagtgcttttttaat------ac |
204 |
Q |
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| T |
46893310 |
gaagtgatgaatgataaaagacacttcttgtgttgtttagacacaaatttgttgtttcagtagaccgtttttggtataagtgcttttttaataaaaaaaa |
46893211 |
T |
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| Q |
205 |
nnnnnnngaattttaaaatgtgtttaacaagacaaggcgacaaacaaccgctaagttt |
262 |
Q |
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| T |
46893210 |
aaaaaatgaattttaaaatgtgtttaataagacaaggcgacaaacaaccgctaagttt |
46893153 |
T |
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