View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11411_high_9 (Length: 344)

Name: NF11411_high_9
Description: NF11411
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11411_high_9
NF11411_high_9
[»] chr7 (27 HSPs)
chr7 (49-336)||(18873133-18873420)
chr7 (54-336)||(15167948-15168230)
chr7 (58-336)||(10895795-10896073)
chr7 (50-336)||(14422758-14423043)
chr7 (43-332)||(13122904-13123193)
chr7 (43-327)||(12709833-12710117)
chr7 (54-336)||(16009351-16009631)
chr7 (43-332)||(13743487-13743774)
chr7 (43-336)||(12590633-12590924)
chr7 (43-336)||(13007207-13007497)
chr7 (56-222)||(16677180-16677348)
chr7 (56-222)||(17651416-17651584)
chr7 (17-109)||(21230923-21231015)
chr7 (54-109)||(11382871-11382926)
chr7 (54-109)||(11389348-11389403)
chr7 (30-109)||(20311026-20311107)
chr7 (54-173)||(13679428-13679548)
chr7 (25-109)||(148619-148703)
chr7 (53-108)||(2971254-2971309)
chr7 (17-68)||(14945072-14945123)
chr7 (17-68)||(15372665-15372716)
chr7 (53-108)||(20906461-20906516)
chr7 (54-108)||(11311059-11311113)
chr7 (48-89)||(831628-831669)
chr7 (48-89)||(1196808-1196849)
chr7 (48-89)||(34958578-34958619)
chr7 (54-110)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (49-336)||(22750914-22751201)
chr5 (17-336)||(38144500-38144817)
chr5 (54-336)||(28370055-28370335)
chr5 (54-336)||(19512160-19512441)
chr5 (49-336)||(23528405-23528690)
chr5 (54-118)||(18407944-18408008)
chr5 (30-109)||(22438723-22438803)
chr5 (54-118)||(23111200-23111264)
chr5 (17-109)||(42961566-42961658)
chr5 (17-69)||(1856445-1856497)
chr5 (17-69)||(21674415-21674467)
chr5 (53-108)||(19236900-19236955)
chr5 (43-168)||(34830024-34830149)
chr5 (53-106)||(22461158-22461211)
chr5 (53-106)||(22467782-22467835)
[»] chr3 (29 HSPs)
chr3 (54-336)||(14762758-14763040)
chr3 (56-336)||(38310802-38311082)
chr3 (56-336)||(20247791-20248063)
chr3 (56-336)||(24192728-24193009)
chr3 (54-336)||(9534102-9534382)
chr3 (53-336)||(23370505-23370787)
chr3 (56-338)||(55499104-55499385)
chr3 (53-336)||(24933828-24934109)
chr3 (30-222)||(16801444-16801635)
chr3 (43-231)||(41455087-41455272)
chr3 (54-115)||(18929239-18929300)
chr3 (54-118)||(17240513-17240577)
chr3 (17-69)||(24122221-24122273)
chr3 (53-108)||(13302240-13302295)
chr3 (53-108)||(13323787-13323842)
chr3 (53-167)||(10389443-10389557)
chr3 (53-167)||(10414532-10414646)
chr3 (53-167)||(10421202-10421316)
chr3 (17-69)||(13967762-13967814)
chr3 (17-69)||(13973237-13973289)
chr3 (53-108)||(12033444-12033499)
chr3 (53-108)||(13312896-13312951)
chr3 (53-108)||(17131732-17131787)
chr3 (53-108)||(51301589-51301644)
chr3 (30-68)||(18127695-18127733)
chr3 (30-68)||(18135465-18135503)
chr3 (40-68)||(14543478-14543506)
chr3 (40-68)||(16829104-16829132)
chr3 (40-68)||(16837626-16837654)
[»] scaffold0026 (2 HSPs)
scaffold0026 (43-336)||(11840-12133)
scaffold0026 (53-336)||(111460-111741)
[»] scaffold1773 (1 HSPs)
scaffold1773 (46-332)||(956-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (46-332)||(49957-50241)
[»] chr4 (13 HSPs)
chr4 (43-332)||(8045822-8046110)
chr4 (30-330)||(11847886-11848191)
chr4 (53-167)||(53483646-53483760)
chr4 (17-109)||(15408139-15408231)
chr4 (53-214)||(27906159-27906321)
chr4 (54-110)||(8834895-8834951)
chr4 (54-110)||(13888641-13888697)
chr4 (56-137)||(14486632-14486713)
chr4 (54-110)||(15245215-15245271)
chr4 (59-110)||(22724691-22724742)
chr4 (32-68)||(1650182-1650219)
chr4 (48-89)||(15747551-15747592)
chr4 (54-110)||(15308120-15308176)
[»] chr6 (23 HSPs)
chr6 (30-336)||(29614124-29614429)
chr6 (54-287)||(23057760-23057993)
chr6 (54-336)||(23838972-23839253)
chr6 (43-336)||(10986170-10986462)
chr6 (17-338)||(18800210-18800529)
chr6 (54-336)||(4477631-4477912)
chr6 (56-338)||(21565214-21565494)
chr6 (43-188)||(930085-930229)
chr6 (30-336)||(12168138-12168440)
chr6 (30-336)||(19785847-19786149)
chr6 (30-336)||(19878231-19878533)
chr6 (43-336)||(19287047-19287337)
chr6 (30-336)||(19884007-19884309)
chr6 (53-167)||(34639986-34640100)
chr6 (53-167)||(34646660-34646774)
chr6 (53-167)||(25469704-25469816)
chr6 (17-109)||(24512807-24512899)
chr6 (54-110)||(25397172-25397228)
chr6 (54-106)||(9187498-9187550)
chr6 (54-110)||(19471335-19471391)
chr6 (54-110)||(25348486-25348542)
chr6 (53-137)||(31252394-31252478)
chr6 (56-110)||(25598643-25598697)
[»] scaffold0029 (1 HSPs)
scaffold0029 (30-336)||(111674-111960)
[»] scaffold0924 (1 HSPs)
scaffold0924 (43-332)||(740-1029)
[»] chr2 (19 HSPs)
chr2 (54-336)||(19661454-19661734)
chr2 (54-336)||(6483492-6483772)
chr2 (54-336)||(6486959-6487239)
chr2 (30-338)||(26583600-26583904)
chr2 (56-338)||(23089057-23089337)
chr2 (56-338)||(23878781-23879060)
chr2 (54-338)||(23101463-23101745)
chr2 (53-167)||(5706023-5706137)
chr2 (54-118)||(23265133-23265197)
chr2 (54-118)||(23280201-23280265)
chr2 (54-115)||(21908353-21908414)
chr2 (54-110)||(24661576-24661632)
chr2 (17-68)||(6260135-6260186)
chr2 (17-61)||(19665037-19665081)
chr2 (53-108)||(10577-10632)
chr2 (53-108)||(25180929-25180984)
chr2 (43-221)||(23168288-23168470)
chr2 (43-221)||(23579545-23579727)
chr2 (44-125)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (56-336)||(14398-14678)
[»] chr8 (17 HSPs)
chr8 (56-336)||(8727735-8728015)
chr8 (53-336)||(44477397-44477678)
chr8 (53-336)||(44492555-44492836)
chr8 (43-332)||(23866391-23866680)
chr8 (17-328)||(27940815-27941127)
chr8 (43-336)||(17054366-17054656)
chr8 (54-163)||(18614217-18614327)
chr8 (54-118)||(23482053-23482117)
chr8 (17-109)||(14056527-14056619)
chr8 (54-110)||(39364919-39364975)
chr8 (43-109)||(25111976-25112042)
chr8 (54-108)||(29643386-29643440)
chr8 (17-69)||(30765873-30765925)
chr8 (53-108)||(24320670-24320725)
chr8 (18-78)||(21325730-21325791)
chr8 (18-77)||(21321132-21321192)
chr8 (54-110)||(21931696-21931752)
[»] chr1 (12 HSPs)
chr1 (54-336)||(20437024-20437305)
chr1 (30-167)||(41111977-41112112)
chr1 (54-118)||(32651563-32651627)
chr1 (54-109)||(19663517-19663572)
chr1 (54-118)||(18712790-18712854)
chr1 (54-110)||(20805320-20805376)
chr1 (54-109)||(11158093-11158148)
chr1 (56-110)||(10811785-10811839)
chr1 (53-108)||(20851132-20851187)
chr1 (53-108)||(20857759-20857814)
chr1 (53-108)||(21706276-21706331)
chr1 (53-108)||(21710818-21710873)
[»] scaffold0117 (2 HSPs)
scaffold0117 (43-336)||(1887-2179)
scaffold0117 (43-336)||(8564-8856)
[»] scaffold0247 (1 HSPs)
scaffold0247 (17-336)||(11116-11433)
[»] scaffold0553 (1 HSPs)
scaffold0553 (53-336)||(10195-10477)
[»] scaffold0544 (1 HSPs)
scaffold0544 (53-336)||(1525-1807)
[»] scaffold0090 (1 HSPs)
scaffold0090 (17-332)||(17946-18261)
[»] scaffold0058 (1 HSPs)
scaffold0058 (30-336)||(65-368)
[»] scaffold0154 (1 HSPs)
scaffold0154 (17-222)||(30743-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (56-338)||(3295-3576)
[»] scaffold0077 (1 HSPs)
scaffold0077 (56-338)||(3624-3904)
[»] scaffold0634 (1 HSPs)
scaffold0634 (213-336)||(3435-3558)
[»] scaffold0796 (2 HSPs)
scaffold0796 (48-231)||(1727-1907)
scaffold0796 (48-231)||(5750-5930)
[»] scaffold0456 (4 HSPs)
scaffold0456 (49-136)||(904-991)
scaffold0456 (49-136)||(8049-8136)
scaffold0456 (197-293)||(806-901)
scaffold0456 (197-293)||(7951-8046)
[»] scaffold0129 (1 HSPs)
scaffold0129 (47-165)||(45268-45386)
[»] scaffold0107 (1 HSPs)
scaffold0107 (17-109)||(40495-40587)
[»] scaffold0235 (1 HSPs)
scaffold0235 (17-107)||(22556-22646)
[»] scaffold0019 (1 HSPs)
scaffold0019 (24-109)||(135473-135558)
[»] scaffold0310 (1 HSPs)
scaffold0310 (30-109)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (54-118)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (54-118)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (54-109)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (54-118)||(8-72)
[»] scaffold0146 (1 HSPs)
scaffold0146 (54-118)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (54-118)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (43-105)||(1453-1515)
[»] scaffold2054 (1 HSPs)
scaffold2054 (43-142)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (53-137)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (54-173)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (54-110)||(12296-12352)
[»] scaffold0261 (1 HSPs)
scaffold0261 (43-221)||(23559-23738)
[»] scaffold0139 (2 HSPs)
scaffold0139 (54-109)||(14997-15052)
scaffold0139 (30-68)||(26892-26930)
[»] scaffold0001 (1 HSPs)
scaffold0001 (44-125)||(493019-493099)
[»] scaffold0790 (1 HSPs)
scaffold0790 (43-75)||(5487-5519)
[»] scaffold0249 (1 HSPs)
scaffold0249 (17-61)||(2212-2256)
[»] scaffold0096 (1 HSPs)
scaffold0096 (50-110)||(39503-39563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (53-108)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (53-108)||(10239-10294)
[»] scaffold0034 (1 HSPs)
scaffold0034 (56-214)||(73178-73337)
[»] scaffold0023 (1 HSPs)
scaffold0023 (53-108)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (54-108)||(1913-1967)
[»] scaffold0067 (3 HSPs)
scaffold0067 (30-68)||(46708-46746)
scaffold0067 (40-68)||(55733-55761)
scaffold0067 (40-68)||(62119-62147)
[»] scaffold0453 (1 HSPs)
scaffold0453 (53-137)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (54-110)||(2628-2684)
[»] scaffold0005 (1 HSPs)
scaffold0005 (40-68)||(266108-266136)


Alignment Details
Target: chr7 (Bit Score: 256; Significance: 1e-142; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 49 - 336
Target Start/End: Complemental strand, 18873420 - 18873133
Alignment:
Q  49 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 148  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  149 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 18873221  T
Q  249 cataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||||||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18873220 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 18873133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 54 - 336
Target Start/End: Complemental strand, 15168230 - 15167948
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 15168031  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15168030 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 15167948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 58 - 336
Target Start/End: Original strand, 10895795 - 10896073
Alignment:
Q  58 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 156  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  157 gatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 256  Q
    ||||||||||| ||||| |||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  257 aattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
     ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 10896073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 50 - 336
Target Start/End: Complemental strand, 14423043 - 14422758
Alignment:
Q  50 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 148  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  149 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||| | ||| || ||||||    
T  14422943 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  249 cataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||||||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||||||||||    
T  14422844 cataaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 14422758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 43 - 332
Target Start/End: Original strand, 13122904 - 13123193
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctttgttgctg 241  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  |||||||||| |||||| ||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttg 13123101  T
Q  242 ctgtgatcataaa-ttaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgtt 332  Q
    |||||||| |||| | | ||| |||||| || |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  13123102 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtgattgttgctgtt 13123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 43 - 327
Target Start/End: Original strand, 12709833 - 12710117
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctttgttgctg 241  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  |||||||||| |||||| ||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttg 12710030  T
Q  242 ctgtgatcataaa-ttaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg 327  Q
    |||||||| |||| | | ||| |||||| || |||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  12710031 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtgattgttg 12710117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 54 - 336
Target Start/End: Complemental strand, 16009631 - 16009351
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 153  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||| |  || || |||||||||||    
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    | | ||||||| ||| || ||||||||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  16009432 actgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 16009351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 43 - 332
Target Start/End: Complemental strand, 13743774 - 13743487
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 242  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||| | ||||| |||  |||||||| |||| ||||||||| ||||  |||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgc 13743576  T
Q  243 tgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgtt 332  Q
    ||||||||||||||  |||||| ||| |  || |||||| |||||||||||   ||||| |||||||| |||  ||| ||||||| ||||    
T  13743575 tgtgatcataaattggttgaaa-ttatgcttggttggataaattgatgaataattgtataatggtggagtgatatgtgattgttgctgtt 13743487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 43 - 336
Target Start/End: Original strand, 12590633 - 12590924
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 242  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| ||||||||| |||||||  ||||| |||    
T  12590732 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgc 12590829  T
Q  243 tgtgat-cataaattaattgaaatttacgaatg-attggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgttgatg 336  Q
    ||| || ||| |||| |||||| |||  | ||| |||| ||  |||||||||| | || |||||||| ||||||  |||||||||||||||||||||    
T  12590830 tgtaatccattaattgattgaatttt--ggatgaattgtatttattgatgaatatttggatgatggtagaatgattctgtaattgttgttgttgatg 12590924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 43 - 336
Target Start/End: Complemental strand, 13007497 - 13007207
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 242  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| |||||||  ||||| |||    
T  13007398 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 13007302  T
Q  243 tgtgat-cataaattaattgaaatttacgaatg-attggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgttgatg 336  Q
    ||| || ||| |||| |||||| |||  | ||| |||| ||||||||||||| |  ||| ||||||||||||||  || ||||||||||||||||||    
T  13007301 tgtaatccatgaattgattgaatttt--ggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgttgttgttgatg 13007207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 16677348 - 16677180
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 222  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 16677180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 56 - 222
Target Start/End: Complemental strand, 17651584 - 17651416
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 153  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 222  Q
    |||||||||| ||| | | |  | ||||| |||||||||| | ||||||||  | ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaa 17651416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 21230923 - 21231015
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||| ||||| ||||||| |||  ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230923 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 20311026 - 20311107
Alignment:
Q  30 tgctgtgtaattcttctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||| |||  ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311026 tgctgtgcaatctttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 13679548 - 13679428
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 152  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 13679449  T
Q  153 tgatgatgattctgaagggaa 173  Q
    ||||| ||||| |||| ||||    
T  13679448 tgatgctgattttgaaaggaa 13679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 148703 - 148619
Alignment:
Q  25 gattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||| ||||||||  |||||||||||||||||||||||||| ||| |  || || || ||||| |||  |||||||||||||    
T  148703 gattgtgttgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 148619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 14945072 - 14945123
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgag 68  Q
    |||||| ||||| ||||||| | |||||||||||| ||||||||||||||||    
T  14945072 taggaaccgattttgctgtgcatttcttctgcaaatctaaggtaagggtgag 14945123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 15372665 - 15372716
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgag 68  Q
    |||||| ||||| ||||||| | |||||||||||| ||||||||||||||||    
T  15372665 taggaaccgattttgctgtgcatttcttctgcaaatctaaggtaagggtgag 15372716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  48 caaaactaaggtaagggtgagactatctctcgataatcataa 89  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  48 caaaactaaggtaagggtgagactatctctcgataatcataa 89  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  48 caaaactaaggtaagggtgagactatctctcgataatcataa 89  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 256; Significance: 1e-142; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 49 - 336
Target Start/End: Complemental strand, 22751201 - 22750914
Alignment:
Q  49 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 148  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  149 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 22751002  T
Q  249 cataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||||||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22751001 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 22750914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 17 - 336
Target Start/End: Original strand, 38144500 - 38144817
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 116  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38144500 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 38144599  T
Q  117 tgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcag 216  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||||| ||||||| ||    
T  38144600 tgcataattttggaaaataaattgagggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttag 38144698  T
Q  217 aatgaaaacttaatctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagc 316  Q
    |||||||||||||||| |  || || |||||||||||||| ||||||| |||||| ||||||||||||||||||||  | |||||||||||||| ||| |    
T  38144699 aatgaaaacttaatctatactgttgttgtgatcataaattgattgaaa-ttacgattgattggatgaattgatgaagatttgtatgatggtggagtgatc 38144797  T
Q  317 tgtaattgttgttgttgatg 336  Q
    |||| |||||||| ||||||    
T  38144798 tgtatttgttgttcttgatg 38144817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 54 - 336
Target Start/End: Original strand, 28370055 - 28370335
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 153  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| |||||||||||||||||| |  || || |||||||||||    
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||| ||||||| ||| || |||| |||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  28370254 attgattgaaa-ttatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 28370335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 54 - 336
Target Start/End: Complemental strand, 19512441 - 19512160
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 152  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  153 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||| || |||| |||||||| | |||||||||||||| ||||||  ||||||| |||||||||||||||||| |  || || ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  253 aattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  19512242 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 19512160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 49 - 336
Target Start/End: Complemental strand, 23528690 - 23528405
Alignment:
Q  49 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 148  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  149 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 248  Q
    ||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| |||||||  ||||| |||||| ||    
T  23528591 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaat 23528494  T
Q  249 -cataaattaattgaaatttacgaatg-attggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgttgatg 336  Q
     ||| |||| |||||| |||  | ||| |||| ||||||||||||| |  ||| ||||||| ||||||  || ||||||||||||||||||    
T  23528493 ccatgaattgattgaatttt--ggatgaattgtatgaattgatgaaatattgtgtgatggtagaatgattctataattgttgttgttgatg 23528405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 109
Target Start/End: Original strand, 22438723 - 22438803
Alignment:
Q  30 tgctgtgtaattcttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||| |||  |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 42961658 - 42961566
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961658 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 1856445 - 1856497
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgaga 69  Q
    |||||| |||||||||||| ||||  |||||||||||||||||||||||||||    
T  1856445 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 1856497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 21674415 - 21674467
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgaga 69  Q
    |||||| |||||||||||| ||||  |||||||||||||||||||||||||||    
T  21674415 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 21674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 34830149 - 34830024
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattga 141  Q
    ||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| |||||||    
T  34830149 ttctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattga 34830051  T
Q  142 gggttagggtttgatgatgattctgaa 168  Q
    |  ||||||| ||||| ||||| ||||    
T  34830050 gaattagggtatgatgctgattttgaa 34830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 106  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 251; Significance: 1e-139; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 54 - 336
Target Start/End: Original strand, 14762758 - 14763040
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 14762957  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||| ||||||| ||| || |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  14762958 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggagtgatctgtaattgttgttgttgatg 14763040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 56 - 336
Target Start/End: Original strand, 38310802 - 38311082
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  156 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 255  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  256 taattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    | ||||||| ||| || ||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgtatgaaggtggaatgatctgtaattgttgttgttgatg 38311082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 56 - 336
Target Start/End: Original strand, 20247791 - 20248063
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 155  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  156 tgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 255  Q
    ||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  256 taattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    | ||||||| ||| || ||||||        |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20247991 tgattgaaaattatgagtgattg--------gatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 20248063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 183; E-Value: 6e-99
Query Start/End: Original strand, 56 - 336
Target Start/End: Complemental strand, 24193009 - 24192728
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 154  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  155 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtg-atcataa 253  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||| || || ||||||| |||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    | | |||||||  || || ||||||||| ||||||||||| |  ||||||||||||||||| ||||| || ||||||||||||    
T  24192809 actgattgaaa-atatgattgattggataaattgatgaatattggtatgatggtggaatgatctgtatttcttgttgttgatg 24192728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 54 - 336
Target Start/End: Complemental strand, 9534382 - 9534102
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 153  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    ||||||||||||| || | |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||| |  || ||  ||||||||||    
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  9534183 attgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 9534102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 53 - 336
Target Start/End: Original strand, 23370505 - 23370787
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 151  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  152 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 251  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||| |  || || |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  252 aaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||||||||||    
T  23370704 aaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 23370787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 56 - 338
Target Start/End: Original strand, 55499104 - 55499385
Alignment:
Q  56 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 152  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  153 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | |||||| |||||||| |||||||| |   | |||||||||||||    
T  55499203 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcata 55499301  T
Q  253 aattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatgtc 338  Q
    |||| ||||||| | |  | ||||||||||||||||| || || |||||||||||||||||| |||| ||||||||||||||||||    
T  55499302 aattgattgaaaat-ataattgattggatgaattgatcaagttttgtatgatggtggaatgatctgt-attgttgttgttgatgtc 55499385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 53 - 336
Target Start/End: Original strand, 24933828 - 24934109
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  153 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat-cat 251  Q
    ||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| |||||||  ||||| |||||  || |||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctgcaatccat 24934024  T
Q  252 aaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgttgatg 336  Q
     |||| |||| |||||  ||   |||| |||||||||||||| | ||||||||||| ||||||  |||||||||||| ||||||||    
T  24934025 taattgattg-aatttttgatgtattgtatgaattgatgaatatttgtatgatggtagaatgattctgtaattgttgctgttgatg 24934109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 30 - 222
Target Start/End: Original strand, 16801444 - 16801635
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |    
T  16801444 tgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttg 16801542  T
Q  130 aagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaa 222  Q
    ||||| ||||||| |||||||| |||||||||||| ||| | |||  | ||||| |||||||||| | || |||||| | ||||| ||||||||    
T  16801543 aagataaaattgaaggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaa 16801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 43 - 231
Target Start/End: Original strand, 41455087 - 41455272
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||   |||     
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaa 41455185  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatc 231  Q
      |||||| |||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||  ||||||||| |||||||    
T  41455186 aattagggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatc 41455272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 115  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 24122221 - 24122273
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgaga 69  Q
    |||||| |||||||||||| ||||  |||||||||||||||||||||||||||    
T  24122221 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 24122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 10389443 - 10389557
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  153 tgatgatgattctga 167  Q
    |||||||||||||||    
T  10389543 tgatgatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  153 tgatgatgattctga 167  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  153 tgatgatgattctga 167  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 13967762 - 13967814
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgaga 69  Q
    |||||| |||||||||||| | ||  |||||||||||||||||||||||||||    
T  13967762 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13967814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 13973237 - 13973289
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgaga 69  Q
    |||||| |||||||||||| | ||  |||||||||||||||||||||||||||    
T  13973237 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13973289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 18127695 - 18127733
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgag 68  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  18127695 tgctgtgtattttttctgcaaaactaaggtaagggtgag 18127733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 18135465 - 18135503
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgag 68  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  18135465 tgctgtgtattttttctgcaaaactaaggtaagggtgag 18135503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 14543478 - 14543506
Alignment:
Q  40 ttcttctgcaaaactaaggtaagggtgag 68  Q
    |||||||||||||||||||||||||||||    
T  14543478 ttcttctgcaaaactaaggtaagggtgag 14543506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 16829104 - 16829132
Alignment:
Q  40 ttcttctgcaaaactaaggtaagggtgag 68  Q
    |||||||||||||||||||||||||||||    
T  16829104 ttcttctgcaaaactaaggtaagggtgag 16829132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 16837626 - 16837654
Alignment:
Q  40 ttcttctgcaaaactaaggtaagggtgag 68  Q
    |||||||||||||||||||||||||||||    
T  16837626 ttcttctgcaaaactaaggtaagggtgag 16837654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 246; Significance: 1e-136; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 43 - 336
Target Start/End: Original strand, 11840 - 12133
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11840 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgag 11939  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 242  Q
     ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||    
T  11940 agttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgttgttgc 12039  T
Q  243 tgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||||||||||| || ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12040 tgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 12133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 53 - 336
Target Start/End: Complemental strand, 111741 - 111460
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  153 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    |||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||| |  || || ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  253 aattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  111542 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 111460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 46 - 332
Target Start/End: Complemental strand, 1240 - 956
Alignment:
Q  46 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 145  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  146 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgt 245  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgt 1043  T
Q  246 gatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgtt 332  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  1042 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgtt 956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 46 - 332
Target Start/End: Complemental strand, 50241 - 49957
Alignment:
Q  46 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 145  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  146 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgt 245  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgt 50044  T
Q  246 gatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgtt 332  Q
    ||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50043 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgtt 49957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 43 - 332
Target Start/End: Original strand, 8045822 - 8046110
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 242  Q
    ||||||||||||| ||  |||||||||||||||||||||  || ||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgc 8046020  T
Q  243 tgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgtt 332  Q
    |||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  8046021 tgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgctgtt 8046110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 30 - 330
Target Start/End: Complemental strand, 11848191 - 11847886
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | |||||||||||     
T  11848191 tgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttga 11848093  T
Q  130 aagataaa------ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaa 223  Q
    || || ||      ||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| || || ||||||||||||||||||||||    
T  11848092 aaaattaaaatcaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaa 11847993  T
Q  224 acttaatctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaatt 323  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  11847992 acttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatgatggaatgatctgtaatt 11847893  T
Q  324 gttgttg 330  Q
    |||||||    
T  11847892 gttgttg 11847886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 167
Target Start/End: Complemental strand, 53483760 - 53483646
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 151  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  152 ttgatgatgattctga 167  Q
    ||||||||||||||||    
T  53483661 ttgatgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 15408231 - 15408139
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||| ||||| | ||||| |||  ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408231 taggaaccgatttttctgtgcaatctttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 214
Target Start/End: Complemental strand, 27906321 - 27906159
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 151  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  152 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttc 214  Q
     ||||| ||||| |||| | ||| | |||| ||||||||| | | ||||||||| | ||||||    
T  27906221 gtgatgttgattttgaaagaaaaggtgtaagaatcatgtttaatgtgttgtaatttgatgttc 27906159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 137  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  59 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 1650182 - 1650219
Alignment:
Q  32 ctgtgtaattctt-ctgcaaaactaaggtaagggtgag 68  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  1650182 ctgtgtaattctttctgcaaaactaaggtaagggtgag 1650219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  48 caaaactaaggtaagggtgagactatctctcgataatcataa 89  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 212; Significance: 1e-116; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 30 - 336
Target Start/End: Original strand, 29614124 - 29614429
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  29614124 tgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttgg 29614222  T
Q  130 aaga-taaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaactta 228  Q
    || | |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||| |  |||||| ||||||||||||||    
T  29614223 aaaaataaattgagggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgtattg-aatgtttagaatgaaaactta 29614321  T
Q  229 atctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 328  Q
    |||||||||| |||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||    
T  29614322 atctttgttgttgctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgtatgatggtggaataatctgtaagtgttgt 29614421  T
Q  329 tgttgatg 336  Q
    ||||||||    
T  29614422 tgttgatg 29614429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 54 - 287
Target Start/End: Complemental strand, 23057993 - 23057760
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 23057794  T
Q  254 attaattgaaatttacgaatgattggatgaattg 287  Q
    ||| ||||||| ||| || |||||||||||||||    
T  23057793 attgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 54 - 336
Target Start/End: Complemental strand, 23839253 - 23838972
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 152  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  153 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||||| ||||| |||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||| |  || || ||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 23839055  T
Q  253 aattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||||||| ||||| ||||||| |||||||    
T  23839054 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgtcgttgatg 23838972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 43 - 336
Target Start/End: Original strand, 10986170 - 10986462
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 141  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  142 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctg 241  Q
    ||||||||||||||||||||||||| |||| |||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||| |  || ||    
T  10986270 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T
Q  242 ctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
     |||||||||||||| ||||||| |||||| ||||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||| ||||||    
T  10986369 ttgtgatcataaattgattgaaa-ttacgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttcttgatg 10986462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 171; E-Value: 9e-92
Query Start/End: Original strand, 17 - 338
Target Start/End: Complemental strand, 18800529 - 18800210
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 116  Q
    |||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18800529 taggaaccgattttgctgtgtaatccttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 18800430  T
Q  117 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 215  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||||||| | |||||||    
T  18800429 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttca 18800331  T
Q  216 gaatgaaaacttaatctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgag 315  Q
     ||||||| |||||||| | ||| || |||||||| ||||| ||||||| | |  | |||||||||||||||||||| ||  |||||||||||||||||     
T  18800330 aaatgaaatcttaatctatattgttgttgtgatcacaaattgattgaaaat-ataattgattggatgaattgatgaagtttggtatgatggtggaatgat 18800232  T
Q  316 ctgtaattgttgttgttgatgtc 338  Q
    |||  |||||||||||| |||||    
T  18800231 ctg-cattgttgttgttaatgtc 18800210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 54 - 336
Target Start/End: Complemental strand, 4477912 - 4477631
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 152  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  153 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    |||||||||||||| |||| |||||||| | |||||| ||||||||||||||| ||||||| |||||||||||||||||| | ||| || ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  253 aattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||| ||||||| ||| || ||||||||||| ||||| ||  | |||||||||||||| ||| ||||| |||||||||||||||    
T  4477713 aattgattgaaa-ttatgattgattggatgatttgataaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 4477631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 56 - 338
Target Start/End: Original strand, 21565214 - 21565494
Alignment:
Q  56 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 153  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| |||||||| |  || ||||||||||||||    
T  21565313 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 21565411  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatgtc 338  Q
    ||| ||||||| | |  | |||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||    
T  21565412 attgattgaaaat-ataattgattggatgaattgatgaagttctgtatgatggtggaatgatctgt-attgttgttgttgatgtc 21565494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 43 - 188
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcat 188  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  930185 ggttagggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 12168440 - 12168138
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  12168440 tgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgg 12168343  T
Q  130 aagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaa 229  Q
    || ||||  |||  |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| |||||    
T  12168342 aaaataagatgaaagttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaa 12168246  T
Q  230 tctttgttgctgctgtgat-cataaattaattgaaatttacgaatg-attggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgtt 326  Q
    ||  ||||| |||||| || ||| |||| |||||| |||  | ||| |||| ||||||||||||| |  ||| ||||||||||||||  || ||||||||    
T  12168245 tccatgttgttgctgtaatccatgaattgattgaatttt--ggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgtt 12168148  T
Q  327 gttgttgatg 336  Q
    ||||||||||    
T  12168147 gttgttgatg 12168138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 336
Target Start/End: Original strand, 19785847 - 19786149
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  19785847 tgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttgg 19785944  T
Q  130 aagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaa 229  Q
    || ||||| |||  |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| |||||    
T  19785945 aaaataaaatgaaagttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaa 19786041  T
Q  230 tctttgttgctgctgtgat-cataaattaattgaaatttacgaatg-attggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgtt 326  Q
    ||  ||||| |||||| || ||| |||| |||||| |||  | ||| |||| ||||||||||||| |  ||| ||||||||||||||  || ||||||||    
T  19786042 tccatgttgttgctgtaatccatgaattgattgaatttt--ggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgtt 19786139  T
Q  327 gttgttgatg 336  Q
    ||||||||||    
T  19786140 gttgttgatg 19786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 19878533 - 19878231
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  19878533 tgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgg 19878436  T
Q  130 aagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaa 229  Q
    || ||||  |||  |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| |||||    
T  19878435 aaaataagatgaaagttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaa 19878339  T
Q  230 tctttgttgctgctgtgat-cataaattaattgaaatttacgaatg-attggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgtt 326  Q
    ||  ||||| |||||| || ||| |||| |||||| |||  | ||| |||| ||||||||||||| |  ||| ||||||||||||||  || ||||||||    
T  19878338 tccatgttgttgctgtaatccatgaattgattgaatttt--ggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgtt 19878241  T
Q  327 gttgttgatg 336  Q
    ||||||||||    
T  19878240 gttgttgatg 19878231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 43 - 336
Target Start/End: Complemental strand, 19287337 - 19287047
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 242  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| |||||||  ||||| |||    
T  19287238 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19287142  T
Q  243 tgtgat-cataaattaattgaaatttacgaatg-attggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgttgatg 336  Q
    ||| || ||| |||| |||||| |||  | ||| |||| ||||||||||||| |  ||| ||||||||||||||  || ||||||||||||||||||    
T  19287141 tgtaatccatgaattgattgaatttt--ggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgttgttgttgatg 19287047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 19884309 - 19884007
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  19884309 tgctgtctaatt-ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgg 19884212  T
Q  130 aagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaa 229  Q
    || ||||  |||  |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| |||||    
T  19884211 aaaataagatgaaagttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaa 19884115  T
Q  230 tctttgttgctgctgtgat-cataaattaattgaaatttacgaatg-attggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgtt 326  Q
    ||  ||||| |||||| || ||| |||| |||||| |||  | ||| |||| ||||||||||||| |  ||| ||||||||||||||  || ||||||||    
T  19884114 tccatgttgttgctgtaatccatgaattgattgaatttt--ggatgaattgtatgaattgatgaaatattgtgtgatggtggaatgattctataattgtt 19884017  T
Q  327 gttgttgatg 336  Q
    ||||||||||    
T  19884016 gttgttgatg 19884007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 34639986 - 34640100
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   ||   ||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  153 tgatgatgattctga 167  Q
    |||||||| ||||||    
T  34640086 tgatgatggttctga 34640100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 34646660 - 34646774
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||   ||   ||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  153 tgatgatgattctga 167  Q
    |||||||| ||||||    
T  34646760 tgatgatggttctga 34646774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  153 tgatgatgattctga 167  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 24512807 - 24512899
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||| ||||| ||||||| |||  ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512807 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 106  Q
    ||||||||||||||||||||||||| |||||| ||||  ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 137  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 111960 - 111674
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttg 128  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  111960 tgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttg 111862  T
Q  129 gaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaactta 228  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  111861 gaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaactta 111762  T
Q  229 atctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 328  Q
    |||||||||||||||||||||||||||| |||||                    |||||||||||||||||||||||||||||||| |||||||||||||    
T  111761 atctttgttgctgctgtgatcataaattgattga--------------------aattgatgaatttgtgtatgatggtggaatgatctgtaattgttgt 111682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 43 - 332
Target Start/End: Original strand, 740 - 1029
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 141  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  142 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctg 241  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||| || |||||||||||||||||| || ||||||||||| |||||| ||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatc-ttgttgttg 938  T
Q  242 ctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgtt 332  Q
     |||||||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||  ||| ||||||||||||    
T  939 atgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaaagatttgtgattgttgttgtt 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 54 - 336
Target Start/End: Original strand, 19661454 - 19661734
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 153  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    ||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||| | ||| || |||||||||||    
T  19661554 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataa 19661652  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||||||||||    
T  19661653 attgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 19661734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 54 - 336
Target Start/End: Complemental strand, 6483772 - 6483492
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 153  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| |||||||||||||||||| |  || || |||||||||||    
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||| ||||||| ||| || |||| |||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  6483573 attgattgaaa-ttatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 6483492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 54 - 336
Target Start/End: Complemental strand, 6487239 - 6486959
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 153  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    |||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| |||||||||||||||||| |  || || |||||||||||    
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||| ||||||| ||| || |||| |||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  6487040 attgattgaaa-ttatgattgatgggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 6486959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 30 - 338
Target Start/End: Complemental strand, 26583904 - 26583600
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26583904 tgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttgg 26583807  T
Q  130 aagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaa 229  Q
    || |||||||||||||||||| |||||||||||||||| |||||| ||||||| |||||||||| | ||||||||  | ||||||||||||||  | |||    
T  26583806 aaaataaattgagggttagggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaa 26583708  T
Q  230 tctttgttgctgctgtgatcataaatt-aattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgt 328  Q
    ||| |  || ||||||||||| || || ||||| || |||  | || |||||||||||| |||| || |||||||||||||||||| |||| ||||||||    
T  26583707 tctataatgttgctgtgatcacaatttgaattgtaa-ttagaattggttggatgaattggtgaaattttgtatgatggtggaatgatctgt-attgttgt 26583610  T
Q  329 tgttgatgtc 338  Q
    ||||||||||    
T  26583609 tgttgatgtc 26583600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 56 - 338
Target Start/End: Original strand, 23089057 - 23089337
Alignment:
Q  56 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 153  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    |||||||||||| ||||| |||||||||| |||||||||||| ||||||||| | | |||| |||||||| |||||||| |  || ||||||||||||||    
T  23089156 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 23089254  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatgtc 338  Q
    ||| ||||||| | |  | |||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||    
T  23089255 attgattgaaaat-ataattgattggatgaattgatgaagttctgtatgatggtggaatgatctgt-attgttgttgttgatgtc 23089337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 56 - 338
Target Start/End: Complemental strand, 23879060 - 23878781
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 154  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  155 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaa 254  Q
     |||||||||||| |||||  ||||||| |||||||||||| ||||||||| | ||||||||||||||| |||||||| |  || || ||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaa 23878863  T
Q  255 ttaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatgtc 338  Q
    || |||||||  ||  | |||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||    
T  23878862 ttgattgaaa-atagaattgattggatgaattgatgaagttttgtatgatggtggaatgatctgt-attgttgttgttgatgtc 23878781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 54 - 338
Target Start/End: Original strand, 23101463 - 23101745
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 151  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  152 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 251  Q
    |||||||||||||||| ||||| |||||||| |||||||||||| ||||||||| | | |||| |||||||| |||||||| |  || || |||||||||    
T  23101562 ttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcat 23101660  T
Q  252 aaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatgtc 338  Q
    ||||| ||||||| | |  | |||||||||||||| ||||| || |||||||||||||||||| | || ||||||||||||||||||    
T  23101661 aaattgattgaaaat-ataattgattggatgaattcatgaagttctgtatgatggtggaatgatcagt-attgttgttgttgatgtc 23101745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 53 - 167
Target Start/End: Original strand, 5706023 - 5706137
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 151  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  152 ttgatgatgattctga 167  Q
    ||||||||||||||||    
T  5706122 ttgatgatgattctga 5706137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 115  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 6260135 - 6260186
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgag 68  Q
    |||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  6260135 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 6260186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 19665037 - 19665081
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaa 61  Q
    |||||| |||||||||||||||||  |||||||||||||||||||    
T  19665037 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 19665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 221
Target Start/End: Original strand, 23168288 - 23168470
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 137  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23168288 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23168386  T
Q  138 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatga 221  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||    
T  23168387 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatga 23168470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 221
Target Start/End: Original strand, 23579545 - 23579727
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagat----aaa 137  Q
    ||||||||  |||||||||||||| || ||||| ||  | |||||||| ||||||||||| |||||| | ||||| | |||||||| ||||||    |||    
T  23579545 ttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaaattaatctaatagaatagtttt-gaagataaaaaaa 23579643  T
Q  138 ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatga 221  Q
    |||||  ||||||| ||||| ||||| |||| | ||| | |||| | ||||||| | | ||||||||| | |||||||| ||||    
T  23579644 ttgagaattagggtatgatgctgattttgaaagaaaaggtgtaagagtcatgtttaatgtgttgtaatttgatgttcagtatga 23579727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  44 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 125  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 56 - 336
Target Start/End: Original strand, 14398 - 14678
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 154  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  155 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaa 254  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||| ||||||||||||||||| || || |||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  255 ttaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
     | |||||||  || || ||||||||| ||||||||||| |  ||||||||||||||||| ||||| |||||||||||||||    
T  14598 ctgattgaaa-atatgattgattggataaattgatgaatattggtatgatggtggaatgatctgtatttgttgttgttgatg 14678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 190; Significance: 1e-103; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 56 - 336
Target Start/End: Original strand, 8727735 - 8728015
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 154  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  155 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaa 254  Q
    | ||||||||||| ||| | |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||| |  || || ||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  255 ttaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    || ||||||| ||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatggtggaatgatctgtaattgttgttgttgatg 8728015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 53 - 336
Target Start/End: Complemental strand, 44477678 - 44477397
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  153 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| |||||||||||||||||| |  || || ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  253 aattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  44477479 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 44477397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 53 - 336
Target Start/End: Complemental strand, 44492836 - 44492555
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 152  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  153 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    ||||||||||| || |||| |||||||| | |||||||||||||||||||||  ||||||| |||||||||||||||||| |  || || ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  253 aattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  44492637 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 44492555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 43 - 332
Target Start/End: Complemental strand, 23866680 - 23866391
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattct-gttgtaatataatgttcagaatgaaaacttaatctttgttgctg 241  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||  |||||||||||||||||||||  |||||||||| |||||| ||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatc-ttgttgttg 23866483  T
Q  242 ctgtgatcataaa-ttaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgtt 332  Q
    || ||||| |||| | | ||| |||||| || |||||||||||||||||||||||||||||||||||||||| | |||| ||||||| ||||    
T  23866482 ctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatggtggaataatctgtgattgttgctgtt 23866391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 17 - 328
Target Start/End: Original strand, 27940815 - 27941127
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 116  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    | |    
T  27940815 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgtttgatt 27940914  T
Q  117 tgcatagtt-ttggaagataa--attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgtt 213  Q
     | || ||| ||| || ||||  |||| |  ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||| |||||||    
T  27940915 agaattgttcttgaaaaataagaattgggaattagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtt 27941013  T
Q  214 cagaatgaaaacttaatctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatg 313  Q
    ||||||||||| ||||||| |  || || | |||||||||||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||| ||    
T  27941014 cagaatgaaaatttaatctatactgttgttatgatcataaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggagtg 27941112  T
Q  314 agctgtaattgttgt 328  Q
    | || || |||||||    
T  27941113 atctatatttgttgt 27941127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 43 - 336
Target Start/End: Complemental strand, 17054656 - 17054366
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 142  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  143 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 242  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| |||||||  ||||| |||    
T  17054557 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtt-tcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 17054461  T
Q  243 tgtgat-cataaattaattgaaatttacgaatg-attggatgaattgatgaatttgtgtatgatggtggaatga-gctgtaattgttgttgttgatg 336  Q
    ||| || ||| |||| ||||||  ||  | ||| |||| ||||||||||||| |  |||  |||||||||||||  || ||||||||||||||||||    
T  17054460 tgtaatccatgaattgattgaa--ttgtggatgaattgtatgaattgatgaaatattgtgagatggtggaatgattctataattgttgttgttgatg 17054366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 163
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 152  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  153 tgatgatgatt 163  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 14056527 - 14056619
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||| ||||| || |||| |||  ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056527 taggaaccgattttgttgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 25112042 - 25111976
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112042 ttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 30765873 - 30765925
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgaga 69  Q
    |||||| |||||||||||| | ||  |||||||||||||||||||||||||||    
T  30765873 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 30765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 21325730 - 21325791
Alignment:
Q  18 aggaaacgattgtgctgtgtaattctt-ctgcaaaactaaggtaagggtgagactatctctc 78  Q
    ||||| ||||| ||||||| ||||||| ||||||| |||||||||||||||| ||| |||||    
T  21325730 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggtgaggctaactctc 21325791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 21321132 - 21321192
Alignment:
Q  18 aggaaacgattgtgctgtgtaattctt-ctgcaaaactaaggtaagggtgagactatctct 77  Q
    ||||| ||||| ||||||| ||||||| ||||||| |||||||||||| ||||||| ||||    
T  21321132 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggcgagactaactct 21321192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 184; Significance: 2e-99; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 54 - 336
Target Start/End: Original strand, 20437024 - 20437305
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 152  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  153 tgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    |||||||||||||| |||| |||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||| |  || || ||||||||||    
T  20437124 tgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 20437222  T
Q  253 aattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||||||| ||||| |||||||||||||||    
T  20437223 aattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggaatgatctgtatttgttgttgttgatg 20437305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 41112112 - 41111977
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||     
T  41112112 tgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttga 41112015  T
Q  130 aagataaattgagggttagggtttgatgatgattctga 167  Q
    || ||||  |||  ||||||||||||||||||||||||    
T  41112014 aaaataagatgaaagttagggtttgatgatgattctga 41111977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 180; Significance: 4e-97; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 43 - 336
Target Start/End: Original strand, 1887 - 2179
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 141  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  142 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctg 241  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| ||    
T  1987 gggttagggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttg 2084  T
Q  242 ctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||||||||||| || ||||||||| | || |||||| ||||||||||||||||||||| ||||||||||| | |||||| ||||||||||||||    
T  2085 ctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgtacgatggtggaataatctgtaaatgttgttgttgatg 2179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 43 - 336
Target Start/End: Original strand, 8564 - 8856
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 141  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  142 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctg 241  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| ||    
T  8664 gggttagggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttg 8761  T
Q  242 ctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    |||||||||||| || ||||||||| |  | |||||| ||||||||||||||||||||| ||||||||||| | |||||| ||||||||||||||    
T  8762 ctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgtacgatggtggaataatctgtaaatgttgttgttgatg 8856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 336
Target Start/End: Complemental strand, 11433 - 11116
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 116  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11433 taggaaccgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 11334  T
Q  117 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 215  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||||||| | |||||||    
T  11333 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggagggaa-tgagtaatgatcatgttaattctgttgtaatgtgatgttca 11235  T
Q  216 gaatgaaaacttaatctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgag 315  Q
     ||||||| |||||||  |  || ||||||||||| ||||| ||||||| | |  | |||||||||||||||||||| || |||||||||||||| |||     
T  11234 aaatgaaatcttaatccatactgttgctgtgatcacaaattgattgaaaat-ataattgattggatgaattgatgaagttttgtatgatggtggattgat 11136  T
Q  316 ctgtaattgttgttgttgatg 336  Q
    |||| ||||||||||||||||    
T  11135 ctgt-attgttgttgttgatg 11116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 53 - 336
Target Start/End: Original strand, 10195 - 10477
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 151  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  152 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 251  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||| |  || || |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  252 aaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||||||||||    
T  10394 aaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 10477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 173; Significance: 6e-93; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 53 - 336
Target Start/End: Original strand, 1525 - 1807
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 151  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  152 ttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 251  Q
    ||||||||||||||| |||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||| |  || || |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  252 aaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatg 336  Q
    ||||| ||||||| ||| || ||||||||||||||||||||  | |||||||||||||| ||| ||||| |||||||||||||||    
T  1724 aaattgattgaaa-ttatgattgattggatgaattgatgaagatttgtatgatggtggagtgatctgtatttgttgttgttgatg 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 17 - 332
Target Start/End: Complemental strand, 18261 - 17946
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 116  Q
    |||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  18261 taggaaccgattgtgttgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaat 18162  T
Q  117 tgcatag-ttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctg-ttgtaatataatgttc 214  Q
    ||| ||| ||| |||| ||||||||||||||| ||||| ||||||||||| | ||||||| ||||||  |||||||||||||| ||||||| | |||| |    
T  18161 tgcttagctttaggaaaataaattgagggttaaggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtcc 18063  T
Q  215 agaatgaaaacttaatctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatga 314  Q
    ||||||||||||||| || ||||| |||||||||||| |||| ||||||||||  || ||||||||| ||||||||||| | ||||||||||||  ||||    
T  18062 agaatgaaaacttaacctatgttgttgctgtgatcatgaattgattgaaattt-ggattgattggataaattgatgaatatttgtatgatggtgtgatga 17964  T
Q  315 gctgtaattgttgttgtt 332  Q
     |||||||||||||||||    
T  17963 tctgtaattgttgttgtt 17946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 30 - 336
Target Start/End: Complemental strand, 368 - 65
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 129  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  368 tgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttgg 271  T
Q  130 aagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaa 229  Q
    || |||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||| | ||||| |||  |||||||| |||| ||||||    
T  270 aaaataaattgagggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaa 172  T
Q  230 tctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttg-t 328  Q
    ||| ||||  || ||||||||||||||  |||||| ||| || || |||||| |||||||||||   ||||| |||||||| ||| ||||| |||||| |    
T  171 tctatgttattgatgtgatcataaattggttgaaa-ttatgattggttggataaattgatgaataattgtataatggtggagtgatctgtatttgttgat 73  T
Q  329 tgttgatg 336  Q
    ||||||||    
T  72 tgttgatg 65  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 222
Target Start/End: Complemental strand, 30949 - 30743
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 116  Q
    |||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30949 taggaatcgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 30850  T
Q  117 tgcatagttttggaagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttca 215  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||| ||| |||||  | ||||  |||||||||| | ||||||||  | |||| ||    
T  30849 tgcatagttttggaaggtaaaattgaggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgca 30750  T
Q  216 gaatgaa 222  Q
    |||||||    
T  30749 gaatgaa 30743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 114; Significance: 9e-58; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 56 - 338
Target Start/End: Original strand, 3295 - 3576
Alignment:
Q  56 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 153  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  154 gatgatgattctgaagggaaatgggtaat-aatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcata 252  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| | ||||||||||||||| |||||||| |  || ||||||||||| |    
T  3394 gatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcaca 3492  T
Q  253 aattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatgtc 338  Q
    |||| ||||||| | |  | |||||||||||||||||||| || |||||||||||||||||| |||| ||||||||||||||||||    
T  3493 aattgattgaaaat-ataattgattggatgaattgatgaagttttgtatgatggtggaatgatctgt-attgttgttgttgatgtc 3576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 56 - 338
Target Start/End: Original strand, 3624 - 3904
Alignment:
Q  56 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 153  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  154 gatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 253  Q
    |||||||||||||| ||| | |||||||| |||||||||||| ||||||||| | |||||| |||||||| |||||||| |  || || |||||||||||    
T  3723 gatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataa 3821  T
Q  254 attaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaatgagctgtaattgttgttgttgatgtc 338  Q
    ||| ||||||| | |  | |||||||||||||||||||| || ||||||||||||||||||  ||| ||||||||||||||||||    
T  3822 attgattgaaaat-ataattgattggatgaattgatgaagttttgtatgatggtggaatgatttgt-attgttgttgttgatgtc 3904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 213 - 336
Target Start/End: Complemental strand, 3558 - 3435
Alignment:
Q  213 tcagaatgaaaacttaatctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaatttgtgtatgatggtggaat 312  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatggtggaat 3459  T
Q  313 gagctgtaattgttgttgttgatg 336  Q
    || |||||||||||||||||||||    
T  3458 gatctgtaattgttgttgttgatg 3435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 231
Target Start/End: Original strand, 1727 - 1907
Alignment:
Q  48 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 147  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  148 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatc 231  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| |||||||    
T  1826 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatc 1907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 48 - 231
Target Start/End: Original strand, 5750 - 5930
Alignment:
Q  48 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 147  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  148 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatgaaaacttaatc 231  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| || | | | ||| ||||||| ||||||||| |||||||    
T  5849 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatc 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  49 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 136  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 49 - 136
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  49 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 136  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 293
Target Start/End: Complemental strand, 901 - 806
Alignment:
Q  197 tgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaat 293  Q
    ||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||| |||| || ||| ||  |||||||| |||||||||||    
T  901 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattggaa-ttatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 293
Target Start/End: Complemental strand, 8046 - 7951
Alignment:
Q  197 tgttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattaattgaaatttacgaatgattggatgaattgatgaat 293  Q
    ||||||||| | |||||||||||||||||||||||| ||||| ||||||||||||||||| |||| || ||| ||  |||||||| |||||||||||    
T  8046 tgttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattggaa-ttatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 45268 - 45386
Alignment:
Q  47 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 145  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  146 tagggtttgatgatgattct 165  Q
    ||||||||||||||||||||    
T  45367 tagggtttgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 40495 - 40587
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    |||||| ||||| ||||||| |||  ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40495 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 22556 - 22646
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 107  Q
    |||||| ||||| ||||||| |||  ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22556 taggaaccgattttgctgtgcaatatttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 135558 - 135473
Alignment:
Q  24 cgattgtgctgtgtaattcttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||| ||||||| |||  ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135558 cgattttgctgtgcaatctttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 109
Target Start/End: Complemental strand, 17723 - 17643
Alignment:
Q  30 tgctgtgtaattcttctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||| |||  |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 8 - 72
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 118  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 105  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 142
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 141  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  142 g 142  Q
    |    
T  680 g 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 137  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 173
Target Start/End: Complemental strand, 1441 - 1321
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 152  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 1342  T
Q  153 tgatgatgattctgaagggaa 173  Q
    ||||| ||||| |||| ||||    
T  1341 tgatgctgattttgaaaggaa 1321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 221
Target Start/End: Original strand, 23559 - 23738
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 141  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| ||||||||||||||||| | ||||  | |||||| | |||||  |||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaattga 23658  T
Q  142 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttcagaatga 221  Q
    |  ||||||| ||||| ||||| |||| | |||   |||| ||||||||| | | ||||||||| | |||||||| ||||    
T  23659 gaattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatga 23738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 109  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 26930 - 26892
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgag 68  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  26930 tgctgtgtattttttctgcaaaactaaggtaagggtgag 26892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  44 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 125  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0790 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 75
Target Start/End: Complemental strand, 5519 - 5487
Alignment:
Q  43 ttctgcaaaactaaggtaagggtgagactatct 75  Q
    |||||||||||||||||||||||||||||||||    
T  5519 ttctgcaaaactaaggtaagggtgagactatct 5487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Original strand, 2212 - 2256
Alignment:
Q  17 taggaaacgattgtgctgtgtaattcttctgcaaaactaaggtaa 61  Q
    |||||| |||||||||||||||||  |||||||||||||||||||    
T  2212 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 2256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  50 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 214
Target Start/End: Complemental strand, 73337 - 73178
Alignment:
Q  56 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 154  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  155 atgatgattctgaagggaaatgggtaataatcatgttaattctgttgtaatataatgttc 214  Q
    ||| ||||| |||| | ||  | |||| ||||||||| | | ||||||||| | ||||||    
T  73237 atgttgattttgaaagaaacggtgtaagaatcatgtttaatgtgttgtaatttgatgttc 73178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 108  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 46708 - 46746
Alignment:
Q  30 tgctgtgtaattcttctgcaaaactaaggtaagggtgag 68  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  46708 tgctgtgcatttcttctgcaaaactaaggtaagggtgag 46746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 55733 - 55761
Alignment:
Q  40 ttcttctgcaaaactaaggtaagggtgag 68  Q
    |||||||||||||||||||||||||||||    
T  55733 ttcttctgcaaaactaaggtaagggtgag 55761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Original strand, 62119 - 62147
Alignment:
Q  40 ttcttctgcaaaactaaggtaagggtgag 68  Q
    |||||||||||||||||||||||||||||    
T  62119 ttcttctgcaaaactaaggtaagggtgag 62147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 137
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  53 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 137  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  54 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 110  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 68
Target Start/End: Complemental strand, 266136 - 266108
Alignment:
Q  40 ttcttctgcaaaactaaggtaagggtgag 68  Q
    |||||||||||||||||||||||||||||    
T  266136 ttcttctgcaaaactaaggtaagggtgag 266108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University