View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11412_high_23 (Length: 238)
Name: NF11412_high_23
Description: NF11412
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11412_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 36127748 - 36127526
Alignment:
| Q |
1 |
aactcttcaaccaatacctgaaaaccctagctcaacccttccttcttcttctgctactttggtggctcaacctcgcaacaacaatcctatttcttcatat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36127748 |
aactcttcaaccaatacctgaaaaccctagctcaacccttccttcttcttctactactttggtggctcaacctcgcaacaacaatcctatttcttcatat |
36127649 |
T |
|
| Q |
101 |
agccttatatcgagcggcgagagagacgatattggtagaagatggccaaaagatgaagtgttggcattgataaacttgaggtgcaacaacaacaatgaag |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36127648 |
agccttatatcgagcggcgagagagacgatattggtagaagatggccaaaagatgaagtgttggcattgataaacttgaggtgcaacaacaacaatgaag |
36127549 |
T |
|
| Q |
201 |
aaaaggaaggaaacagcaataac |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
36127548 |
aaaaggaaggaaacagcaataac |
36127526 |
T |
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