View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11417_high_1_N (Length: 487)

Name: NF11417_high_1_N
Description: NF11417
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11417_high_1_N
NF11417_high_1_N
[»] chr4 (20 HSPs)
chr4 (20-458)||(1746981-1747419)
chr4 (246-331)||(35723373-35723457)
chr4 (252-296)||(40613443-40613487)
chr4 (257-296)||(8423740-8423779)
chr4 (238-296)||(20743300-20743358)
chr4 (246-296)||(36635311-36635361)
chr4 (277-337)||(44132627-44132685)
chr4 (252-296)||(7012059-7012103)
chr4 (252-330)||(22234880-22234957)
chr4 (252-296)||(23293008-23293052)
chr4 (258-329)||(38148716-38148785)
chr4 (246-296)||(903909-903959)
chr4 (258-296)||(22440622-22440660)
chr4 (257-294)||(23861455-23861492)
chr4 (260-301)||(30522932-30522973)
chr4 (260-296)||(16189710-16189746)
chr4 (246-282)||(17345451-17345487)
chr4 (246-294)||(20521873-20521921)
chr4 (252-296)||(24343500-24343544)
chr4 (262-294)||(34200295-34200327)
[»] chr7 (30 HSPs)
chr7 (246-329)||(32308107-32308188)
chr7 (252-330)||(19206043-19206119)
chr7 (246-337)||(6630895-6630984)
chr7 (252-296)||(29787391-29787435)
chr7 (253-330)||(30731031-30731104)
chr7 (246-295)||(11722121-11722170)
chr7 (256-323)||(5548673-5548738)
chr7 (246-320)||(20549778-20549850)
chr7 (246-316)||(22868029-22868097)
chr7 (254-296)||(23191891-23191933)
chr7 (246-296)||(26733291-26733341)
chr7 (246-296)||(27945028-27945078)
chr7 (247-323)||(22602707-22602781)
chr7 (252-336)||(24339635-24339717)
chr7 (252-293)||(28155563-28155604)
chr7 (252-296)||(24289813-24289857)
chr7 (252-296)||(25481895-25481939)
chr7 (246-292)||(10042924-10042970)
chr7 (246-323)||(21828402-21828477)
chr7 (246-296)||(22484012-22484062)
chr7 (258-296)||(32287485-32287523)
chr7 (246-291)||(25791640-25791685)
chr7 (246-330)||(26329372-26329454)
chr7 (267-335)||(35297657-35297723)
chr7 (245-294)||(35861950-35861999)
chr7 (252-288)||(1433447-1433483)
chr7 (264-296)||(2424619-2424651)
chr7 (252-292)||(2425759-2425799)
chr7 (252-292)||(5307253-5307293)
chr7 (252-335)||(23128646-23128727)
[»] chr6 (35 HSPs)
chr6 (244-336)||(10339109-10339200)
chr6 (243-320)||(19040336-19040411)
chr6 (243-336)||(26562673-26562764)
chr6 (246-320)||(7265593-7265665)
chr6 (246-323)||(9027165-9027240)
chr6 (246-296)||(9658866-9658916)
chr6 (246-337)||(16766684-16766773)
chr6 (252-330)||(5000616-5000692)
chr6 (241-295)||(7801179-7801233)
chr6 (252-294)||(9629376-9629418)
chr6 (252-290)||(20371138-20371176)
chr6 (259-323)||(9025491-9025553)
chr6 (247-296)||(17341686-17341735)
chr6 (246-337)||(9107353-9107442)
chr6 (252-292)||(10842525-10842565)
chr6 (246-289)||(5732539-5732582)
chr6 (252-330)||(8931592-8931668)
chr6 (252-294)||(7377972-7378014)
chr6 (246-296)||(7996400-7996450)
chr6 (246-296)||(8022351-8022401)
chr6 (246-296)||(12696311-12696361)
chr6 (246-296)||(13851723-13851773)
chr6 (246-292)||(17841615-17841661)
chr6 (246-296)||(19044451-19044501)
chr6 (260-294)||(30866168-30866202)
chr6 (254-295)||(6665208-6665249)
chr6 (256-336)||(10294104-10294182)
chr6 (243-296)||(13360394-13360447)
chr6 (243-296)||(31959143-31959196)
chr6 (259-296)||(32511688-32511725)
chr6 (246-330)||(34073337-34073419)
chr6 (252-296)||(7977852-7977896)
chr6 (260-296)||(31579247-31579283)
chr6 (252-292)||(33001315-33001355)
chr6 (252-296)||(34595127-34595171)
[»] chr8 (22 HSPs)
chr8 (252-330)||(24362192-24362268)
chr8 (254-330)||(11927076-11927150)
chr8 (252-296)||(34897078-34897122)
chr8 (252-292)||(39954305-39954345)
chr8 (246-336)||(15816113-15816201)
chr8 (246-320)||(31109518-31109590)
chr8 (252-294)||(31236601-31236643)
chr8 (252-320)||(13844596-13844662)
chr8 (259-296)||(18067956-18067993)
chr8 (246-294)||(13436988-13437036)
chr8 (246-294)||(22651963-22652011)
chr8 (252-292)||(27101508-27101548)
chr8 (228-296)||(30271313-30271381)
chr8 (257-296)||(4611532-4611571)
chr8 (246-320)||(4786338-4786410)
chr8 (252-330)||(11944658-11944734)
chr8 (254-296)||(7658458-7658500)
chr8 (252-294)||(27213540-27213582)
chr8 (246-296)||(29510326-29510376)
chr8 (265-320)||(3025557-3025610)
chr8 (259-330)||(25566841-25566910)
chr8 (246-294)||(36934657-36934705)
[»] chr1 (45 HSPs)
chr1 (254-336)||(25361881-25361961)
chr1 (246-296)||(2896143-2896193)
chr1 (246-296)||(36878448-36878498)
chr1 (259-331)||(34371714-34371783)
chr1 (252-323)||(9828037-9828106)
chr1 (252-296)||(10474999-10475043)
chr1 (244-330)||(10572579-10572663)
chr1 (246-296)||(398787-398837)
chr1 (246-296)||(17831553-17831603)
chr1 (246-294)||(6427337-6427385)
chr1 (252-323)||(7918208-7918277)
chr1 (252-296)||(12443482-12443526)
chr1 (243-294)||(1262868-1262919)
chr1 (246-296)||(5376522-5376572)
chr1 (246-300)||(6415019-6415073)
chr1 (252-329)||(17754304-17754379)
chr1 (263-336)||(44482234-44482305)
chr1 (245-294)||(609482-609531)
chr1 (243-296)||(19562643-19562696)
chr1 (252-296)||(113292-113336)
chr1 (260-296)||(10233254-10233290)
chr1 (256-296)||(25098577-25098617)
chr1 (252-296)||(34298429-34298473)
chr1 (246-293)||(9709807-9709854)
chr1 (257-296)||(26238134-26238173)
chr1 (245-296)||(27471588-27471639)
chr1 (243-294)||(38078685-38078736)
chr1 (254-320)||(39953146-39953210)
chr1 (254-296)||(5898288-5898330)
chr1 (246-300)||(9103627-9103681)
chr1 (258-296)||(20157372-20157410)
chr1 (246-296)||(38503307-38503357)
chr1 (246-296)||(40285676-40285726)
chr1 (254-292)||(41877496-41877534)
chr1 (246-287)||(9690303-9690344)
chr1 (252-320)||(29163381-29163447)
chr1 (255-296)||(31015039-31015080)
chr1 (246-295)||(36905984-36906033)
chr1 (259-296)||(40181871-40181908)
chr1 (252-296)||(1486731-1486775)
chr1 (252-296)||(13436451-13436495)
chr1 (260-296)||(19909298-19909334)
chr1 (252-296)||(21378571-21378615)
chr1 (252-292)||(21530682-21530722)
chr1 (252-323)||(34712380-34712449)
[»] chr5 (30 HSPs)
chr5 (237-337)||(3966481-3966579)
chr5 (228-294)||(30098295-30098361)
chr5 (218-294)||(19737506-19737582)
chr5 (252-296)||(28588696-28588740)
chr5 (253-296)||(27932229-27932272)
chr5 (246-336)||(39698528-39698616)
chr5 (246-292)||(27144450-27144496)
chr5 (246-291)||(17123035-17123080)
chr5 (246-294)||(31084310-31084358)
chr5 (246-293)||(2436909-2436956)
chr5 (246-364)||(6035470-6035585)
chr5 (246-296)||(6247609-6247659)
chr5 (246-296)||(6326319-6326369)
chr5 (246-292)||(14674256-14674302)
chr5 (254-292)||(19579696-19579734)
chr5 (246-296)||(21191078-21191128)
chr5 (259-296)||(6471911-6471948)
chr5 (253-294)||(9449463-9449504)
chr5 (243-296)||(21576767-21576820)
chr5 (256-293)||(26716141-26716178)
chr5 (256-293)||(26985881-26985918)
chr5 (260-320)||(30502388-30502446)
chr5 (260-320)||(30542731-30542789)
chr5 (257-333)||(32766930-32767004)
chr5 (260-324)||(36838544-36838606)
chr5 (244-296)||(4344727-4344779)
chr5 (246-321)||(11685926-11685999)
chr5 (252-296)||(34879343-34879387)
chr5 (252-292)||(35017030-35017070)
chr5 (252-284)||(38816729-38816761)
[»] chr2 (23 HSPs)
chr2 (252-296)||(21616755-21616799)
chr2 (245-296)||(21782840-21782891)
chr2 (259-329)||(44860320-44860388)
chr2 (246-291)||(31284035-31284080)
chr2 (256-296)||(37411266-37411306)
chr2 (258-336)||(18889575-18889651)
chr2 (246-296)||(23718013-23718063)
chr2 (246-296)||(24105685-24105735)
chr2 (254-296)||(28677904-28677946)
chr2 (228-296)||(24894357-24894426)
chr2 (246-318)||(31808064-31808134)
chr2 (256-296)||(18276518-18276558)
chr2 (254-296)||(10535781-10535823)
chr2 (252-294)||(18420458-18420500)
chr2 (246-296)||(21374721-21374771)
chr2 (246-296)||(30404872-30404922)
chr2 (256-330)||(36409619-36409689)
chr2 (246-294)||(896198-896246)
chr2 (252-296)||(19573971-19574015)
chr2 (245-301)||(35447904-35447960)
chr2 (246-337)||(36756327-36756416)
chr2 (246-294)||(37558964-37559012)
chr2 (252-296)||(42832298-42832342)
[»] scaffold0004 (1 HSPs)
scaffold0004 (246-296)||(92794-92844)
[»] chr3 (38 HSPs)
chr3 (244-296)||(4987313-4987365)
chr3 (252-331)||(8039824-8039901)
chr3 (252-296)||(8383250-8383294)
chr3 (246-321)||(26290358-26290431)
chr3 (225-300)||(8412963-8413038)
chr3 (252-294)||(5407271-5407313)
chr3 (247-296)||(10690284-10690333)
chr3 (243-296)||(10954936-10954989)
chr3 (252-320)||(49505154-49505220)
chr3 (246-294)||(5441055-5441103)
chr3 (257-320)||(7928448-7928509)
chr3 (252-296)||(12704000-12704044)
chr3 (252-296)||(34307802-34307846)
chr3 (246-294)||(40052319-40052367)
chr3 (246-301)||(2620070-2620125)
chr3 (246-293)||(9800027-9800074)
chr3 (257-323)||(11313797-11313861)
chr3 (253-296)||(14979175-14979218)
chr3 (252-336)||(25064902-25064982)
chr3 (246-296)||(1438791-1438841)
chr3 (246-296)||(21479105-21479155)
chr3 (246-296)||(21720751-21720801)
chr3 (252-336)||(14209106-14209188)
chr3 (256-293)||(24633763-24633800)
chr3 (246-330)||(28678290-28678372)
chr3 (243-296)||(32429402-32429455)
chr3 (252-296)||(4990989-4991033)
chr3 (252-296)||(11493383-11493427)
chr3 (252-296)||(11610514-11610558)
chr3 (246-325)||(11665931-11666008)
chr3 (246-294)||(14829677-14829724)
chr3 (252-296)||(16192772-16192816)
chr3 (252-296)||(23870581-23870625)
chr3 (252-292)||(25074782-25074822)
chr3 (252-296)||(26508103-26508147)
chr3 (252-296)||(28917994-28918038)
chr3 (256-292)||(32804566-32804602)
chr3 (252-296)||(34910310-34910354)
[»] scaffold0036 (1 HSPs)
scaffold0036 (256-330)||(9737-9809)
[»] scaffold1528 (1 HSPs)
scaffold1528 (252-329)||(1028-1103)
[»] scaffold0306 (1 HSPs)
scaffold0306 (246-296)||(13387-13437)
[»] scaffold0152 (1 HSPs)
scaffold0152 (246-296)||(21890-21940)
[»] scaffold0103 (1 HSPs)
scaffold0103 (246-296)||(51798-51848)
[»] scaffold0223 (1 HSPs)
scaffold0223 (252-328)||(20165-20239)
[»] scaffold0044 (1 HSPs)
scaffold0044 (252-296)||(53173-53217)
[»] scaffold0020 (1 HSPs)
scaffold0020 (252-323)||(135309-135378)
[»] scaffold0123 (1 HSPs)
scaffold0123 (259-329)||(44516-44584)
[»] scaffold0110 (1 HSPs)
scaffold0110 (243-294)||(28834-28885)
[»] scaffold0018 (1 HSPs)
scaffold0018 (246-293)||(192274-192321)
[»] scaffold0008 (1 HSPs)
scaffold0008 (260-330)||(263362-263430)
[»] scaffold0003 (1 HSPs)
scaffold0003 (246-336)||(241581-241669)
[»] scaffold0085 (1 HSPs)
scaffold0085 (252-294)||(26386-26428)
[»] scaffold0136 (1 HSPs)
scaffold0136 (256-336)||(3833-3911)
[»] scaffold0024 (1 HSPs)
scaffold0024 (261-337)||(68225-68299)
[»] scaffold0697 (1 HSPs)
scaffold0697 (252-292)||(1637-1677)
[»] scaffold0361 (1 HSPs)
scaffold0361 (252-296)||(14523-14567)
[»] scaffold0066 (1 HSPs)
scaffold0066 (252-296)||(33385-33429)
[»] scaffold0049 (1 HSPs)
scaffold0049 (260-296)||(63774-63810)
[»] scaffold0027 (1 HSPs)
scaffold0027 (252-296)||(46675-46719)


Alignment Details
Target: chr4 (Bit Score: 324; Significance: 0; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 20 - 458
Target Start/End: Original strand, 1746981 - 1747419
Alignment:
Q  20 atcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgtaatttataactttgtataacacatgactaattgcattatattgcacattata 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  1746981 atcaaatccagatgatacaattcaagggaaagcaaagaaaaacaatgtaatttataactttgtataacacataactaattgcattatattgcaccttata 1747080  T
Q  120 taaaaatcttaacatacaagattactaggaaattatggtgcatagagtaataatcaaatacagaaaatctaagttggcattttcaaagnnnnnnnctagt 219  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||       |||||    
T  1747081 taaaaatcttaccatacaagattactaggaaattatggtgcatagagtaataatcaaata--------ctaagttggcattttcaaagaaaaaaactagt 1747172  T
Q  220 ttcaatcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa--------cattttatgtg 311  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||| ||||||    
T  1747173 ttcaatcaatgaagcaaggacaccgagcacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaattatacgttattatatgtg 1747272  T
Q  312 tcagtgtcgtgttggtgtcgaacacatggggacacgcttaatctaaggagtgttgcaggtcaacctcttcaaggaagggaagtcatcgtagtcgtagcta 411  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| ||||    
T  1747273 tcagtgtcgtgttggtgtcgaacacatggggacacgcctaatctaaggagtgttgtaggtcaacctcttcaagggagggaagtcattgtagtcgtggcta 1747372  T
Q  412 acaactaggtcgtttttatggagagagtggtcaaagttggaacaagt 458  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  1747373 acaactaggtcgtttttatggagagagtggtcaaagttggaacaagt 1747419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 331
Target Start/End: Complemental strand, 35723457 - 35723373
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaat-cacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 331  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||| | ||  ||| |||||||||||||||| | |||||||    
T  35723457 acactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgta--attatatgtgtcagtgtcgtatcggtgtcg 35723373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 40613443 - 40613487
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  40613443 acacgccgacaccgctaatattttgagaaaatcacataattcagt 40613487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 8423779 - 8423740
Alignment:
Q  257 ccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  8423779 ccgacaccgctaataatttgagaaaatcacataattcagt 8423740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 20743358 - 20743300
Alignment:
Q  238 gacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||| |||||||| |||||||||||| | |||||| |||||||||| ||||||||||||    
T  20743358 gacatcgaacactgacacgccgacacggataataatttgagaaaatgacataattcagt 20743300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 36635311 - 36635361
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||| ||||| ||||||| |||||||||||||||||||||||    
T  36635311 acactgacacgccaacaccactaataatttgagaaaatcacataattcagt 36635361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 44132685 - 44132627
Alignment:
Q  277 agaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 337  Q
    |||||||||| ||||||||| |||  || |||||||| |||||||||||||||||||||||    
T  44132685 agaaaatcacgtaattcagtataa--ttatatgtgtcggtgtcgtgttggtgtcgaacaca 44132627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 7012059 - 7012103
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||    
T  7012059 acacgccgacaccgataataatttgagaaaatgacataattcagt 7012103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 22234957 - 22234880
Alignment:
Q  252 acacgccgacaccgctaataaattg-agaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    |||||||||||||||||| || ||| | |||||||||||||||||| ||  ||| |||||||| ||||||||| ||||||    
T  22234957 acacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgta--attctatgtgtcggtgtcgtgtcggtgtc 22234880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 23293052 - 23293008
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  23293052 acacgccgacacagctaataatttgaaaaaatcacataattcagt 23293008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 38148785 - 38148716
Alignment:
Q  258 cgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 329  Q
    ||||||||||||||  ||||||||||||||||||||||| ||  ||||||  ||||  ||||||||||||||    
T  38148785 cgacaccgctaatagtttgagaaaatcacataattcagtgta--attttaaatgtcgatgtcgtgttggtgt 38148716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 903909 - 903959
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||| ||| ||||| |||||| |||||||||||||||||||||||    
T  903909 acactgacacaccggcaccgttaataatttgagaaaatcacataattcagt 903959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 22440660 - 22440622
Alignment:
Q  258 cgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||| |||||| |||||||||||||||||||||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagt 22440622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 294
Target Start/End: Complemental strand, 23861492 - 23861455
Alignment:
Q  257 ccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  23861492 ccgacaccgctaataaattgataaaatcacatgattca 23861455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 30522973 - 30522932
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagtttaac 301  Q
    ||||||||||| | ||||||||||||||||||||||| ||||    
T  30522973 acaccgctaattatttgagaaaatcacataattcagtgtaac 30522932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 16189710 - 16189746
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||| || |||||||||||||||||||||||    
T  16189710 acaccgctaaaaatttgagaaaatcacataattcagt 16189746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 282
Target Start/End: Complemental strand, 17345487 - 17345451
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaa 282  Q
    ||||| ||||||||||||||||||||| |||||||||    
T  17345487 acactgacacgccgacaccgctaataatttgagaaaa 17345451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 20521921 - 20521873
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| ||||||||| |||| |||||| |||| ||||||||||||||||    
T  20521921 acactgacacgccgataccgataataatttgataaaatcacataattca 20521873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 24343500 - 24343544
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||    
T  24343500 acacgccgacacggataataatttgagaaaattacataattcagt 24343544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 294
Target Start/End: Complemental strand, 34200327 - 34200295
Alignment:
Q  262 accgctaataaattgagaaaatcacataattca 294  Q
    ||||||||||| |||||||||||||||||||||    
T  34200327 accgctaataatttgagaaaatcacataattca 34200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 329
Target Start/End: Original strand, 32308107 - 32308188
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 329  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||| |||||    
T  32308107 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta--attgtatgtgtcagtgtcgtgtcggtgt 32308188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 19206043 - 19206119
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||  ||| |||||||| ||||| ||||||||||    
T  19206043 acacgccgacaccgctaataatttgagaaaatcacataattca--ttataattatatgtgtcggtgtcttgttggtgtc 19206119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 6630984 - 6630895
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 337  Q
    ||||| ||||||||||||| ||||||| |||||||| |||| ||||||||| ||  ||| ||||||||  |||||||||||||||| |||||    
T  6630984 acactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgta--attatatgtgtcgatgtcgtgttggtgtcggacaca 6630895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 29787435 - 29787391
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  29787435 acacgccgacaccgctaataatttgagaaaatcacataattcagt 29787391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 30731031 - 30731104
Alignment:
Q  253 cacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||    || |||||| ||||||||||||||||    
T  30731031 cacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaa----ttgtgtgtcggtgtcgtgttggtgtc 30731104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 295
Target Start/End: Complemental strand, 11722170 - 11722121
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcag 295  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||    
T  11722170 acactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 323
Target Start/End: Original strand, 5548673 - 5548738
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    |||||||||||| |||| |||||||||||| |||||||||| ||  ||| ||||||||||||||||||    
T  5548673 gccgacaccgctgataatttgagaaaatcaaataattcagtgta--attatatgtgtcagtgtcgtgt 5548738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 20549778 - 20549850
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    ||||| |||| |||||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgta--attatatgtgtcggtgtcg 20549850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 316
Target Start/End: Original strand, 22868029 - 22868097
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagt 316  Q
    ||||| ||||||||||||| |||||||  |||||||||||||||||||||| ||  ||| |||||||||||    
T  22868029 acactgacacgccgacaccactaataatatgagaaaatcacataattcagtgta--attatatgtgtcagt 22868097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 23191891 - 23191933
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  23191891 acgccgacaccgctaataatttgagaaaatcacatatttcagt 23191933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 26733291 - 26733341
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||| ||||||||||||||| |||| ||||||||||||||||||    
T  26733291 acactgacacgtcgacaccgctaataatttgacaaaatcacataattcagt 26733341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 27945028 - 27945078
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||| ||||||| |||||||||| ||||||||||||    
T  27945028 acactgacacgccgacaccactaataatttgagaaaattacataattcagt 27945078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 22602781 - 22602707
Alignment:
Q  247 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    |||| ||||||||||||||  ||| | ||||||||||||||||||||||| ||  ||| |||||||| |||||||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgt 22602707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 24339635 - 24339717
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||| ||||||| ||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgtcggtgtcggacac 24339717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 293
Target Start/End: Original strand, 28155563 - 28155604
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattc 293  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  28155563 acacgccgacaccgctaataatttgagaaaattacataattc 28155604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 24289813 - 24289857
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||    
T  24289813 acacgccgacaccgccaataatttgagaaaattacataattcagt 24289857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 25481895 - 25481939
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  25481895 acacgccgacacagctaataatttgaaaaaatcacataattcagt 25481939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 10042924 - 10042970
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||||||||||||||||| ||||||| |||| ||| ||||||||||    
T  10042924 acacttacacgccgacaccactaataatttgataaattcacataatt 10042970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 323
Target Start/End: Complemental strand, 21828477 - 21828402
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    ||||| |||||||||||||| || ||| |||||||||||||||||| || | ||  ||| ||||||||||||| ||||    
T  21828477 acactgacacgccgacaccgttagtaatttgagaaaatcacataatccattgta--attgtatgtgtcagtgttgtgt 21828402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 22484012 - 22484062
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||||||||| || |||||||  |||||||||||    
T  22484012 acactgacacgccgacaccgctaataattttagaaaattgcataattcagt 22484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 32287523 - 32287485
Alignment:
Q  258 cgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  32287523 cgacaccgctaataatctgagaaaatcacataattcagt 32287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 25791640 - 25791685
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataat 291  Q
    ||||| ||||||||||||||||||| | |||||||| |||||||||    
T  25791640 acactgacacgccgacaccgctaattatttgagaaattcacataat 25791685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 26329454 - 26329372
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    ||||| ||||||||||| || |||||| ||||||||| |||| |||||||| ||  ||| |||||||| | ||||||| ||||||    
T  26329454 acactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgta--attatatgtgtcggcgtcgtgtcggtgtc 26329372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 335
Target Start/End: Complemental strand, 35297723 - 35297657
Alignment:
Q  267 taataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaaca 335  Q
    |||||| |||||||||||||||||||||  |||  ||| |||||||  ||||||||||| |||||||||    
T  35297723 taataatttgagaaaatcacataattca--ttataattatatgtgttggtgtcgtgttgatgtcgaaca 35297657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 35861950 - 35861999
Alignment:
Q  245 aacacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||| ||||||||||||  ||||||| |||| ||||||||||||||||    
T  35861950 aacactaacacgccgacacaactaataatttgaaaaaatcacataattca 35861999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 288
Target Start/End: Original strand, 1433447 - 1433483
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacat 288  Q
    |||||||||||||| |||||| |||||||||||||||    
T  1433447 acacgccgacaccgttaataatttgagaaaatcacat 1433483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 2424619 - 2424651
Alignment:
Q  264 cgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||| |||||||||||||||||||||||    
T  2424619 cgctaataatttgagaaaatcacataattcagt 2424651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 2425799 - 2425759
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    |||||||| ||||| |||||| |||||||||||||||||||    
T  2425799 acacgccggcaccgttaataatttgagaaaatcacataatt 2425759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 5307253 - 5307293
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||||||||||| || |||| |||||||||||||||||||    
T  5307253 acacgccgacaccacttataatttgagaaaatcacataatt 5307293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 335
Target Start/End: Complemental strand, 23128727 - 23128646
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaaca 335  Q
    |||||| ||||||  |||||| ||||||||| || |||||||||| |||  |  |||||||| |||| ||||||||||||||||    
T  23128727 acacgctgacaccaataataatttgagaaaaccatataattcagtgtaa--tcatatgtgtcggtgttgtgttggtgtcgaaca 23128646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 244 - 336
Target Start/End: Complemental strand, 10339200 - 10339109
Alignment:
Q  244 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    ||||||| ||||||||||||||| | ||| ||||||||||||||||||||||| | | ||| |||||||||||| ||||| ||||||| ||||    
T  10339200 gaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgtta-attatatgtgtcagtgccgtgtcggtgtcggacac 10339109  T

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Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 19040336 - 19040411
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||    
T  19040336 cgaatactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta--attatatgtgtctgtgtcg 19040411  T

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Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 243 - 336
Target Start/End: Original strand, 26562673 - 26562764
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    |||||||  |||||||||||| ||||| || ||||||||||||||||||||||| ||  ||| ||||||||  |||||||| ||||||||||||    
T  26562673 cgaacacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgta--attatatgtgtcgatgtcgtgtcggtgtcgaacac 26562764  T

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Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 7265665 - 7265593
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||    
T  7265665 acactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcg 7265593  T

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Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 323
Target Start/End: Original strand, 9027165 - 9027240
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||| || ||  ||| |||||||| |||||||||    
T  9027165 acactgacacgccgacaccgctaataatttgagataatcacataattccgtgta--attatatgtgtcggtgtcgtgt 9027240  T

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Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 9658866 - 9658916
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  9658866 acactgacacgccgacaccgctaataatttaagaaaatcacataattcagt 9658916  T

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Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 16766684 - 16766773
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 337  Q
    ||||| |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||| ||||||| |||||    
T  16766684 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgtcggtgtcggacaca 16766773  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 5000692 - 5000616
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    ||||| ||||||||||||||| | ||||||||||||| ||||||| ||  ||||||| |||||||||| ||| ||||||    
T  5000692 acacgtcgacaccgctaataattcgagaaaatcacatgattcagtata--attttatatgtcagtgtcatgtcggtgtc 5000616  T

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Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 7801233 - 7801179
Alignment:
Q  241 accgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcag 295  Q
    |||||||||| ||||||||||||  ||||||| |||| |||||||||||||||||    
T  7801233 accgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcag 7801179  T

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Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 9629376 - 9629418
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||||||||||||| ||||| |||||||||||||||||||||    
T  9629376 acacgccgacaccgccaataatttgagaaaatcacataattca 9629418  T

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Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 20371176 - 20371138
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataa 290  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  20371176 acacgccgacaccgctaataatttgagaaaatcacataa 20371138  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 323
Target Start/End: Complemental strand, 9025553 - 9025491
Alignment:
Q  259 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    ||||| |||||||| ||||||||||||||||||||||| ||  ||| |||||||| |||||||||    
T  9025553 gacactgctaataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgt 9025491  T

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Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 17341735 - 17341686
Alignment:
Q  247 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||| |||||||||||||| |||||| |||| ||||||||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagt 17341686  T

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Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 9107442 - 9107353
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 337  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| |||||||| ||  |||  | ||||| ||||||||| ||||||| |||||    
T  9107442 acactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgta--attacaagtgtcggtgtcgtgtcggtgtcggacaca 9107353  T

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Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 10842525 - 10842565
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  10842525 acacgccgacaccgctaataatttgaaaaaatcacataatt 10842565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 289
Target Start/End: Complemental strand, 5732582 - 5732539
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacata 289  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||    
T  5732582 acactgacacgccgacaccgttaataatttgagaaaatcacata 5732539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 8931668 - 8931592
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    |||||||||||| ||||| || |||||||||| |||||||||||| ||  ||| ||||||||  |||||||| ||||||    
T  8931668 acacgccgacacagctaaaaatttgagaaaataacataattcagtata--attatatgtgtcgatgtcgtgtcggtgtc 8931592  T

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Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 7377972 - 7378014
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||| ||||||||||||| || |||||||||||||||||||||    
T  7377972 acaccccgacaccgctaaaaatttgagaaaatcacataattca 7378014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 7996450 - 7996400
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||| |||||||| |||||||| |||||||||||| ||||||||||    
T  7996450 acactgacatgccgacactgctaataatttgagaaaatcatataattcagt 7996400  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 8022351 - 8022401
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||| |||||||| |||||||| |||||||||||| ||||||||||    
T  8022351 acactgacatgccgacactgctaataatttgagaaaatcatataattcagt 8022401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 12696311 - 12696361
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  12696311 acactgacacgccgacacagctaataatttgaaaaaattacataattcagt 12696361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 13851723 - 13851773
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||| ||||||||||||||| |||||||||| || |||||||||    
T  13851723 acactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagt 13851773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Complemental strand, 17841661 - 17841615
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  17841661 acactgacacgccgacacagctaataatttgaaaaaatcacataatt 17841615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 19044451 - 19044501
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||  ||||||| ||||||| |||||||||||||||    
T  19044451 acactgacacgccgacacgactaataatttgagaatatcacataattcagt 19044501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 260 - 294
Target Start/End: Complemental strand, 30866202 - 30866168
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattca 294  Q
    ||||||||||||| |||||||||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattca 30866168  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 6665208 - 6665249
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataattcag 295  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||    
T  6665208 acgccgaaaccgctaataatttgagtaaatcacataattcag 6665249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Original strand, 10294104 - 10294182
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    ||||| ||||||||||| |||||| |||| |||| |||| | |||  || |||||||| ||||||||||||||||| ||||    
T  10294104 gccgataccgctaataatttgagataatcgcatatttcaatgtaa--ttatatgtgtcggtgtcgtgttggtgtcggacac 10294182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 13360447 - 13360394
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||  ||||| ||||||| ||| ||| |||||||||||||||||||||||    
T  13360447 cgaacacagacacgtcgacaccactagtaatttgagaaaatcacataattcagt 13360394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 31959143 - 31959196
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||| |||||||| ||| |||||||| |||| ||||||||||||| ||||    
T  31959143 cgaacactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagt 31959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 32511725 - 32511688
Alignment:
Q  259 gacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||| || ||||||||||||||||||||    
T  32511725 gacaccgctaataatttaagaaaatcacataattcagt 32511688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 34073419 - 34073337
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    ||||| ||| ||| ||| ||||||||| ||||||||||| ||||||||||| ||  ||| |||| ||| ||||||||| ||||||    
T  34073419 acactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgta--attatatgggtcggtgtcgtgtcggtgtc 34073337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 7977896 - 7977852
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagt 7977852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 296
Target Start/End: Complemental strand, 31579283 - 31579247
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||| |||||| |||||||||||||||||||||||    
T  31579283 acaccgttaataatttgagaaaatcacataattcagt 31579247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 33001355 - 33001315
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    |||||||||||| |||||||| |||| ||||||||||||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataatt 33001315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 34595127 - 34595171
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  34595127 acacgccgacacaactaataatttgaaaaaatcacataattcagt 34595171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 8e-16; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 252 - 330
Target Start/End: Complemental strand, 24362268 - 24362192
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    ||||||||||||||||||||| |||||| |||||||||||||||| ||  ||| ||||||||| |||||||| ||||||    
T  24362268 acacgccgacaccgctaataatttgagagaatcacataattcagtgta--attatatgtgtcaatgtcgtgtcggtgtc 24362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 330
Target Start/End: Complemental strand, 11927150 - 11927076
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    |||||||||| | |||||| |||| |||||||||||||||||| ||  ||| |||||||| ||||||||||||||||    
T  11927150 acgccgacactgttaataatttgataaaatcacataattcagtgta--attatatgtgtcggtgtcgtgttggtgtc 11927076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 34897078 - 34897122
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||    
T  34897078 acacgtcgacaccgctaataatttgagaaaatcacataattcagt 34897122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 292
Target Start/End: Complemental strand, 39954345 - 39954305
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  39954345 acacgccgacaccgctaataatttgagaaaatcacataatt 39954305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 336
Target Start/End: Complemental strand, 15816201 - 15816113
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    ||||| ||||||||||||  ||||||| |||| |||||||||||||| ||| ||  ||| || ||||| ||||||||||||||||| ||||    
T  15816201 acactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgta--attataagtgtcggtgtcgtgttggtgtcggacac 15816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 31109590 - 31109518
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    ||||| |||||||||||||| |||||| |||||||||||| | |||||||| ||||  | |||||||||||||||    
T  31109590 acactgacacgccgacaccgttaataatttgagaaaatcaaacaattcagtctaac--tatatgtgtcagtgtcg 31109518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 31236643 - 31236601
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattca 31236601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 13844662 - 13844596
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||| ||  ||| |||||||| ||||||    
T  13844662 acacgccgacactgctaataatttgagaaaatcacataattgagtgta--attatatgtgtcggtgtcg 13844596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 18067993 - 18067956
Alignment:
Q  259 gacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||| |||||||||||||||||||||||    
T  18067993 gacaccgctaataatttgagaaaatcacataattcagt 18067956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 13437036 - 13436988
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  13437036 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 22651963 - 22652011
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  22651963 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 22652011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 27101508 - 27101548
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||||||||||||||||||| |||| ||||||||||||||    
T  27101508 acacgccgacaccgctaataatttgaaaaaatcacataatt 27101548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 296
Target Start/End: Complemental strand, 30271381 - 30271313
Alignment:
Q  228 atgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||  ||||||| ||||| |||||||||||| |||||| | |||| ||||||||||||| ||||    
T  30271381 atgaagcacagacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagt 30271313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Original strand, 4611532 - 4611571
Alignment:
Q  257 ccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagt 4611571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 4786410 - 4786338
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    ||||| |||||||||||||  |||||| || |||||||||||||||||||| ||  ||| |||||||| ||||||    
T  4786410 acactgacacgccgacaccattaataatttaagaaaatcacataattcagtgta--attatatgtgtcggtgtcg 4786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 11944658 - 11944734
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    |||||||||||| | |||||| |||| |||||||||||| ||||| ||  ||| |||||||| ||||||||||| ||||    
T  11944658 acacgccgacactgttaataatttgataaaatcacataactcagtgta--attatatgtgtcggtgtcgtgttgatgtc 11944734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 7658458 - 7658500
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||    
T  7658458 acgccgacaccactaataatttgagaaaattacataattcagt 7658500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 27213540 - 27213582
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||||||||| |||||||| || ||||||||||||||||||    
T  27213540 acacgccgacactgctaataatttcagaaaatcacataattca 27213582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 29510376 - 29510326
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| ||||||||    
T  29510376 acactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagt 29510326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 3025557 - 3025610
Alignment:
Q  265 gctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    |||||||| ||||||||||||||||||||||| ||  ||| || ||||||||||||    
T  3025557 gctaataatttgagaaaatcacataattcagtgta--attataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 330
Target Start/End: Original strand, 25566841 - 25566910
Alignment:
Q  259 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    ||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||| ||||||||||||||||    
T  25566841 gacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcggtgtcgtgttggtgtc 25566910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 36934657 - 36934705
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| ||||| ||||||||||||||| | || ||||||||||||||||    
T  36934657 acactaacacgtcgacaccgctaataattcgaaaaaatcacataattca 36934705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 254 - 336
Target Start/End: Original strand, 25361881 - 25361961
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    ||||||||||| || |||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||| ||||||| ||||    
T  25361881 acgccgacaccactgataatttgagaaaatcacataattcagtgta--attatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 2896193 - 2896143
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  2896193 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagt 2896143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 36878448 - 36878498
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  36878448 acactgacacgccgacaccgctaataatttgagaaaatcacataattcagt 36878498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 331
Target Start/End: Original strand, 34371714 - 34371783
Alignment:
Q  259 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 331  Q
    |||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||| |||||||||||||||||    
T  34371714 gacaccgctaataa-ttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgttggtgtcg 34371783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 323
Target Start/End: Original strand, 9828037 - 9828106
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||| ||  |||||||||||| |||||||||    
T  9828037 acacgccgacaccactaataatttgataaaatcacataattcagtgta--attttatgtgtcggtgtcgtgt 9828106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 10475043 - 10474999
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  10475043 acacgccgacaccgctaataacttgagaaaatcacataattcagt 10474999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 10572663 - 10572579
Alignment:
Q  244 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||||||| || ||  |||  ||||||| |||| |||||||||||    
T  10572663 gaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgta--attaaatgtgtcggtgttgtgttggtgtc 10572579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 398837 - 398787
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||||||||    
T  398837 acactgacacgccgacaccgctaataatttgaaaaaatcacataattcagt 398787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 17831603 - 17831553
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||||||||| ||||||||||||||| |||||||    
T  17831603 acactgacacgccgacaccgctaataatttgagaaaatcacattattcagt 17831553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 6427337 - 6427385
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| ||||||| ||||||||||||| |||||||||||||||||||||    
T  6427337 acactgacacgccaacaccgctaataatttgagaaaatcacataattca 6427385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 7918277 - 7918208
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    |||||| |||| | ||||||| ||||||||||||||||||||||| ||  ||| ||||||||||||||||||    
T  7918277 acacgctgacatcactaataatttgagaaaatcacataattcagtgta--attatatgtgtcagtgtcgtgt 7918208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 12443526 - 12443482
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| |||||||| |||||||||||||||||||||||    
T  12443526 acacgccgacacagctaataatttgagaaaatcacataattcagt 12443482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 1262868 - 1262919
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||||  |||||||||||| |||||||| |||||||||||||||||||||    
T  1262868 cgaacacggacacgccgacacagctaataatttgagaaaatcacataattca 1262919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 5376572 - 5376522
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||||||||| || ||||||| ||||||||||||    
T  5376572 acactaacacgccgacaccgctaataatttaagaaaataacataattcagt 5376522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 6415073 - 6415019
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 300  Q
    ||||| ||||||||||| ||||||| | |||||||||||||||||| ||||||||    
T  6415073 acactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaa 6415019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 17754304 - 17754379
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 329  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| ||||  | ||||||||||||| |||| |||||    
T  17754304 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaac--tatatgtgtcagtgtggtgtcggtgt 17754379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 336
Target Start/End: Original strand, 44482234 - 44482305
Alignment:
Q  263 ccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    ||||| |||| ||||||||||||||||||||||| ||  ||| |||||||| ||||||||| ||||||| ||||    
T  44482234 ccgcttataatttgagaaaatcacataattcagtgta--attatatgtgtcggtgtcgtgtcggtgtcggacac 44482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 609531 - 609482
Alignment:
Q  245 aacacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||| ||||||||||||| ||||||| |||||||||| ||||||||||    
T  609531 aacactgacacgccgacaccactaataatttgagaaaattacataattca 609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 19562696 - 19562643
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||| |||||||||||| |||||||| ||||||||||| |||| ||||||    
T  19562696 cgaacactgacacgccgacactgctaataatttgagaaaatctcatagttcagt 19562643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 113292 - 113336
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| |||||||| |||| ||||||||||||||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagt 113336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 10233254 - 10233290
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||||||||||||||||||||||||||    
T  10233254 acaccactaataaattgagaaaatcacataattcagt 10233290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 25098617 - 25098577
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  25098617 gccgacaccgctgataatttgagaaaatcacataattcagt 25098577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 34298429 - 34298473
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||| |||||||| ||||||| |||||||||||||||||||||||    
T  34298429 acacaccgacaccactaataatttgagaaaatcacataattcagt 34298473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 9709807 - 9709854
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 293  Q
    ||||| ||| ||| ||||||||||||| ||||||||||||||||||||    
T  9709807 acactgacatgcctacaccgctaataatttgagaaaatcacataattc 9709854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 26238173 - 26238134
Alignment:
Q  257 ccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||||| |||||||||| ||||||||||||    
T  26238173 ccgacaccgctaataatttgagaaaataacataattcagt 26238134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 296
Target Start/End: Complemental strand, 27471639 - 27471588
Alignment:
Q  245 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||| |||| |||| ||||||||||| ||||||||| |||||||||||||    
T  27471639 aacactgacacaccgataccgctaataatttgagaaaagcacataattcagt 27471588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 38078736 - 38078685
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||||| ||||| |||||| |||||||| |||| ||||||||||||||||    
T  38078736 cgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattca 38078685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 320
Target Start/End: Complemental strand, 39953210 - 39953146
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    ||||||||||||||||||| || |||||||||||||||| ||| ||  ||| |||||||| ||||||    
T  39953210 acgccgacaccgctaataattttagaaaatcacataatttagtgta--attgtatgtgtcggtgtcg 39953146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 5898330 - 5898288
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||||||||  ||| ||||||||||||||||||    
T  5898330 acgccgacaccgctaataatctgaaaaaatcacataattcagt 5898288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 9103627 - 9103681
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 300  Q
    ||||| |||||||||||| | |||||| |||| |||||||||||||| |||||||    
T  9103627 acactgacacgccgacacagttaataatttgaaaaaatcacataatttagtttaa 9103681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 296
Target Start/End: Complemental strand, 20157410 - 20157372
Alignment:
Q  258 cgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagt 20157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 38503307 - 38503357
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||| |||||||||||||||| |||||||||||| ||| ||||||    
T  38503307 acactaacacaccgacaccgctaataatttgagaaaatcatatatttcagt 38503357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 40285726 - 40285676
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||| || ||||||||||||| ||||||||||| |||||||||||    
T  40285726 acactgacacaccaacaccgctaataatttgagaaaatcgcataattcagt 40285676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Complemental strand, 41877534 - 41877496
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  41877534 acgccgacaccgctaataatttgagaaaattacataatt 41877496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 287
Target Start/End: Complemental strand, 9690344 - 9690303
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcaca 287  Q
    ||||| |||||| ||||||||||||||| |||||||||||||    
T  9690344 acactgacacgctgacaccgctaataaactgagaaaatcaca 9690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 29163447 - 29163381
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    |||||||||||||||||| || ||  ||||||||||||||||| ||||  ||| |||||||| ||||||    
T  29163447 acacgccgacaccgctaaaaatttaggaaaatcacataattcaattta--attatatgtgtcggtgtcg 29163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 296
Target Start/End: Original strand, 31015039 - 31015080
Alignment:
Q  255 cgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||| |||| |||||||| |||||||||||||||||||||||    
T  31015039 cgcctacacagctaataatttgagaaaatcacataattcagt 31015080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 36905984 - 36906033
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcag 295  Q
    ||||| |||| || |||||||||||||  |||||||||||||||||||||    
T  36905984 acactgacacaccaacaccgctaataatctgagaaaatcacataattcag 36906033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Original strand, 40181871 - 40181908
Alignment:
Q  259 gacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  40181871 gacactgctaataatttgagaaaatcacataattcagt 40181908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 1486775 - 1486731
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||    
T  1486775 acacgctgacacagctaataatttgaaaaaatcacataattcagt 1486731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 13436451 - 13436495
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| |||||||| || || |||||||||||||||||    
T  13436451 acacgccgacactgctaataatttaaggaaatcacataattcagt 13436495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 19909298 - 19909334
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  19909298 acaccgctaataatttgagaaaatcacataactcagt 19909334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 21378571 - 21378615
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||| ||||||| ||||||||||||| ||||| ||||||||||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagt 21378615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 21530682 - 21530722
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    |||||||||||||| |||||| |||||||||||| ||||||    
T  21530682 acacgccgacaccgttaataatttgagaaaatcatataatt 21530722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 34712449 - 34712380
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    |||| ||| ||| |||||||| |||||||||| |||||||| ||| |||  || ||||||||||||||||||    
T  34712449 acacaccgtcactgctaataatttgagaaaataacataatttagtgtaa--ttatatgtgtcagtgtcgtgt 34712380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 237 - 337
Target Start/End: Original strand, 3966481 - 3966579
Alignment:
Q  237 ggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    |||||| | ||||| ||| ||||||||||||||||| |||||||||||||| |||||||| ||  ||| |||||||| |||||||||  |||||| ||||    
T  3966481 ggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgta--attatatgtgtcggtgtcgtgtcagtgtcggacac 3966578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 228 - 294
Target Start/End: Original strand, 30098295 - 30098361
Alignment:
Q  228 atgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||||| |||||||| ||||| ||||| ||| |||| |||||| |||||||||||||||||||||    
T  30098295 atgaagcacggacaccggacactgacacgacgaaaccgttaataatttgagaaaatcacataattca 30098361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 19737582 - 19737506
Alignment:
Q  218 gtttcaatcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||||||  ||||||||||||| || ||||| |||||| || |||| |||||| |||||||||| ||||||||||    
T  19737582 gtttcaatctctgaagcaaggacaacggacactgacacgctgaaaccgataataatttgagaaaattacataattca 19737506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 28588740 - 28588696
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  28588740 acacgccgacaccggtaataatttgagaaaatcacataattcagt 28588696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 27932229 - 27932272
Alignment:
Q  253 cacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  27932229 cacgccgacaccgctaataatttgagaaaattacataattcagt 27932272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 39698528 - 39698616
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    ||||| |||||| ||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||||||||||||| ||||||| ||||    
T  39698528 acactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtgtcggacac 39698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 27144450 - 27144496
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||| ||||||||||||||||||||| ||||| |||||||||||||    
T  27144450 acactgacacgccgacaccgctaataatttgaggaaatcacataatt 27144496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 17123035 - 17123080
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataat 291  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||||    
T  17123035 acactgacacgccaacaccgctaataatttgagaaaatcacataat 17123080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 31084310 - 31084358
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  31084310 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 31084358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 2436909 - 2436956
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 293  Q
    ||||| ||||||||||||||||||||| |||  |||||||||||||||    
T  2436909 acactgacacgccgacaccgctaataatttgcaaaaatcacataattc 2436956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 364
Target Start/End: Original strand, 6035470 - 6035585
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacacatggggaca 345  Q
    ||||| ||||||||||||||||||||| ||||| |||| | |||||||||| ||  ||| ||| |||| ||||||||| |||| |  ||||   ||||||    
T  6035470 acactgacacgccgacaccgctaataatttgag-aaataatataattcagtgta--attatatttgtcggtgtcgtgtcggtgacagacacgccgggaca 6035566  T
Q  346 cgcttaatctaaggagtgt 364  Q
    ||| |||||| ||||||||    
T  6035567 cgcctaatctgaggagtgt 6035585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 6247609 - 6247659
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagt 6247659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 6326369 - 6326319
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||| ||||| ||| |||||||||| ||||||||||||    
T  6326369 acactgacacgccgacatcgctagtaatttgagaaaattacataattcagt 6326319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 292
Target Start/End: Original strand, 14674256 - 14674302
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||    
T  14674256 acactgacacgccgacacagctaataatttgaaaaaatcacataatt 14674302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 292
Target Start/End: Original strand, 19579696 - 19579734
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  19579696 acgccgacacagctaataatttgagaaaatcacataatt 19579734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 21191128 - 21191078
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||| |||||||| |||||||| |||| ||||||||||||||||||    
T  21191128 acactgacatgccgacacagctaataatttgaaaaaatcacataattcagt 21191078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 6471948 - 6471911
Alignment:
Q  259 gacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  6471948 gacacggctaataatttgagaaaatcacataattcagt 6471911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 9449463 - 9449504
Alignment:
Q  253 cacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||||||||||  |||||| |||||||||||||||||||||    
T  9449463 cacgccgacaccaataataatttgagaaaatcacataattca 9449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 21576820 - 21576767
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||| | ||||| |||| |||||||| |||| ||||||||||||||||||    
T  21576820 cgaacactgatacgccaacacagctaataatttgaaaaaatcacataattcagt 21576767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 26716141 - 26716178
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattc 293  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26716141 gccgacactgctaataatttgagaaaatcacataattc 26716178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 26985881 - 26985918
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattc 293  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  26985881 gccgacactgctaataatttgagaaaatcacataattc 26985918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 30502446 - 30502388
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    ||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcg 30502388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 30542789 - 30542731
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    ||||||||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcg 30542731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 333
Target Start/End: Complemental strand, 32767004 - 32766930
Alignment:
Q  257 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaa 333  Q
    |||||||||||||||| ||||||||||| || |||||| | ||  ||| |||||||  ||||||||| |||||||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgcacaattcaatgta--attatatgtgtttgtgtcgtgtcggtgtcgaa 32766930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 36838544 - 36838606
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgtt 324  Q
    ||||||||||||| |||||||||| |||||||| ||| ||  ||| |||||||| ||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgta--attatatgtgtcggtgtcgtgtt 36838606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 296
Target Start/End: Original strand, 4344727 - 4344779
Alignment:
Q  244 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||| |||||| ||||||| |||||| |||| ||||| ||||||||||||    
T  4344727 gaacactaacacgctgacaccgataataatttgaaaaaatgacataattcagt 4344779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 11685926 - 11685999
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgt 321  Q
    ||||| ||| ||||||||||||||||| |||||||| || ||||||| ||| ||  ||| |||||||| |||||||    
T  11685926 acactgacatgccgacaccgctaataatttgagaaagtcgcataatttagtgta--attatatgtgtcggtgtcgt 11685999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 34879343 - 34879387
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||| ||||||||| || |||||||||||| ||||||||||    
T  34879343 acacgccggcaccgctaaaaatttgagaaaatcatataattcagt 34879387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 35017030 - 35017070
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  35017030 acacgccgaaaccactaataatttgagaaaatcacataatt 35017070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 284
Target Start/End: Complemental strand, 38816761 - 38816729
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatc 284  Q
    ||||||||||||||||||||| |||||||||||    
T  38816761 acacgccgacaccgctaataatttgagaaaatc 38816729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 21616755 - 21616799
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  21616755 acacgccgacaccgctaataatttgagaaaatcacataattcagt 21616799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 245 - 296
Target Start/End: Complemental strand, 21782891 - 21782840
Alignment:
Q  245 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  21782891 aacactgacacgccgacactgctaataatttgagaaaatcacataattcagt 21782840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 44860320 - 44860388
Alignment:
Q  259 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 329  Q
    |||||||||||||| ||||||||||| ||||||||||| ||  ||| |||||||| |||||||||||||||    
T  44860320 gacaccgctaataatttgagaaaatcgcataattcagtgta--attatatgtgtcggtgtcgtgttggtgt 44860388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 291
Target Start/End: Original strand, 31284035 - 31284080
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataat 291  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  31284035 acacttacacgccgacactgctaataatttgagaaaatcacataat 31284080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 256 - 296
Target Start/End: Complemental strand, 37411306 - 37411266
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  37411306 gccgacaccgctaataatttgagaaaatcacataattcagt 37411266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 258 - 336
Target Start/End: Complemental strand, 18889651 - 18889575
Alignment:
Q  258 cgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    |||| |||||||||||||||||||||||||||||||||| ||  ||  |||||||| ||||| |||| |||||| ||||    
T  18889651 cgacgccgctaataaattgagaaaatcacataattcagtgta--atcatatgtgtcggtgtcttgtttgtgtcggacac 18889575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 23718013 - 23718063
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  23718013 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagt 23718063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 24105685 - 24105735
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||||    
T  24105685 acactgacacaccgacaccgctaataatttgagaaagtcacataattcagt 24105735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 254 - 296
Target Start/End: Original strand, 28677904 - 28677946
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  28677904 acgccgacaccgctaataatttgaaaaaatcacataattcagt 28677946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 296
Target Start/End: Original strand, 24894357 - 24894426
Alignment:
Q  228 atgaagcaaggacac-cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||| |||||| || ||||| |||||||||||| |||||||| || | ||||||||||||||||||    
T  24894357 atgaagcacggacacacggacactgacacgccgacacagctaataatttaaaaaaatcacataattcagt 24894426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 31808064 - 31808134
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgt 318  Q
    ||||| |||| |||||||||||||||| || | |||||||||||||||||| ||  ||| |||||||||||||    
T  31808064 acactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgta--attatatgtgtcagtgt 31808134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 18276518 - 18276558
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  18276518 gccgacaccgctaataatttgagaaaatcacttaattcagt 18276558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 254 - 296
Target Start/End: Complemental strand, 10535823 - 10535781
Alignment:
Q  254 acgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| |||||| |||||||||| ||||||||||||    
T  10535823 acgccgacaccgataataatttgagaaaatgacataattcagt 10535781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 18420500 - 18420458
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||||| |||| |||||||| |||||||||||||||||||||    
T  18420500 acacgccaacactgctaataatttgagaaaatcacataattca 18420458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 21374771 - 21374721
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  21374771 acactaacacgccgacacagctaataatttgaaaaaattacataattcagt 21374721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 30404922 - 30404872
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||||||| | |||||| |||| ||||||||||||||||||    
T  30404922 acactgacacgccgacacggttaataatttgaaaaaatcacataattcagt 30404872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 36409689 - 36409619
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    |||||||||||| |||| |||| |||||||||||||| ||| |||    ||||||||| ||||| ||||||||||    
T  36409689 gccgacaccgctgataatttgaaaaaatcacataatttagtgtaa----ttatgtgtcggtgtcatgttggtgtc 36409619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 896198 - 896246
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| |||||||||||| |||||||  |||||||||||||||| ||||    
T  896198 acactgacacgccgacactgctaatagtttgagaaaatcacatatttca 896246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 19573971 - 19574015
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||    
T  19573971 acacgccgacaccgataataatttaagaaaataacataattcagt 19574015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 35447960 - 35447904
Alignment:
Q  245 aacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaac 301  Q
    ||||||||||||| |||| ||||||||| |  ||||||| |||||||||||| ||||    
T  35447960 aacacttacacgctgacatcgctaataattaaagaaaattacataattcagtataac 35447904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 337
Target Start/End: Complemental strand, 36756416 - 36756327
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 337  Q
    ||||| ||||| ||||||  ||||||| ||||  |||| |||||||||||| |||  || || ||||| |||||||||| ||||||||||||    
T  36756416 acactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaa--ttataagtgtcggtgtcgtgttagtgtcgaacaca 36756327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 37558964 - 37559012
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| |||||||||||| |||||||| |||  ||||||||||||||||    
T  37558964 acactgacacgccgacacagctaataatttgtaaaaatcacataattca 37559012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 42832342 - 42832298
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||| |||||||||||||||| |||||||||| ||||| ||||||    
T  42832342 acacaccgacaccgctaataatttgagaaaattacatatttcagt 42832298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 92794 - 92844
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  92794 acactgacacgccgacaccgctaataatttgagaaaattacataattcagt 92844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 4987365 - 4987313
Alignment:
Q  244 gaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||| |||||||||||| |||||||| |||| ||||||||||||||||||    
T  4987365 gaacactgacacgccgacacagctaataatttgaaaaaatcacataattcagt 4987313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 331
Target Start/End: Complemental strand, 8039901 - 8039824
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcg 331  Q
    ||||||| ||||||||||||| |||||||||| | |||||||||| ||  ||| |||||||| ||||||||| |||||||    
T  8039901 acacgccaacaccgctaataatttgagaaaattatataattcagtgta--attatatgtgtcggtgtcgtgtcggtgtcg 8039824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 8383250 - 8383294
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||    
T  8383250 acacgccgacaccgctaataatttgagaaaatcatataattcagt 8383294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 26290358 - 26290431
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgt 321  Q
    ||||| |||||||||||||  |||||| |||||||||||||||| ||| |||||  ||| ||||||||||||||||    
T  26290358 acactgacacgccgacaccattaataatttgagaaaatcacatagttcggttta--attatatgtgtcagtgtcgt 26290431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 225 - 300
Target Start/End: Complemental strand, 8413038 - 8412963
Alignment:
Q  225 tcaatgaagcaaggacaccgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaa 300  Q
    ||||||||||| |||||||| ||| | |||  |||||||  ||||||| ||||||||| |||||||||||||||||    
T  8413038 tcaatgaagcacggacaccggacattgacagaccgacacaactaataatttgagaaaaacacataattcagtttaa 8412963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 294
Target Start/End: Complemental strand, 5407313 - 5407271
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||||||||||||||| || |||||||||||||||||||||    
T  5407313 acacgccgacaccgctaaaaatttgagaaaatcacataattca 5407271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 10690333 - 10690284
Alignment:
Q  247 cacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||| | ||||||||||||||  ||||||||||||||||||||||    
T  10690333 cacttacactcggacaccgctaataatctgagaaaatcacataattcagt 10690284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 243 - 296
Target Start/End: Original strand, 10954936 - 10954989
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||| ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  10954936 cgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagt 10954989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 320
Target Start/End: Complemental strand, 49505220 - 49505154
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    |||||| || ||||||||||| ||||||||||||||||||| ||| ||  ||| |||||||||||||||    
T  49505220 acacgcagagaccgctaataatttgagaaaatcacataatttagtgta--attatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 294
Target Start/End: Complemental strand, 5441103 - 5441055
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| |||||||| ||||||||| || |||||||||||||||||||||    
T  5441103 acactgacacgccgtcaccgctaaaaatttgagaaaatcacataattca 5441055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 7928448 - 7928509
Alignment:
Q  257 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcg 320  Q
    |||||||||||||||| |||| |||||||||||||||||| ||  ||| |||||||| ||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgta--attatatgtgtcggtgtcg 7928509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 12704000 - 12704044
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||||    
T  12704000 acacgccgacaccactaataatttgagaaaagcacataattcagt 12704044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 34307846 - 34307802
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||| |||||||||||||| |||||||||||||||| ||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcacatatttcagt 34307802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 40052319 - 40052367
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  40052319 acactgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 301
Target Start/End: Complemental strand, 2620125 - 2620070
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaac 301  Q
    ||||| ||||||||||||| ||||| | ||||||||||||||||||| ||| ||||    
T  2620125 acactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaac 2620070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Original strand, 9800027 - 9800074
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 293  Q
    ||||| ||||||||||||| ||||||| |||||||||| |||||||||    
T  9800027 acactgacacgccgacacctctaataatttgagaaaattacataattc 9800074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 323
Target Start/End: Complemental strand, 11313861 - 11313797
Alignment:
Q  257 ccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    ||||||| |||||||| ||||||||||||||||||| ||| ||  ||| ||||||| ||||||||||    
T  11313861 ccgacactgctaataatttgagaaaatcacataatttagtgta--attatatgtgttagtgtcgtgt 11313797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 296
Target Start/End: Original strand, 14979175 - 14979218
Alignment:
Q  253 cacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||| |||||||| |||| ||||||||||||||||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagt 14979218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 25064902 - 25064982
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    ||||||||||||||||||| | |||| |||||||||||||| ||| |||    ||||||||  || |||||||||||||| ||||    
T  25064902 acacgccgacaccgctaatgatttgaaaaaatcacataatttagtgtaa----ttatgtgttggtatcgtgttggtgtcggacac 25064982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 1438791 - 1438841
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||| |||||| |||||| || |||||||||||||||||||||||    
T  1438791 acactgacacaccgacatcgctaacaatttgagaaaatcacataattcagt 1438841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 21479105 - 21479155
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||||||| |||||||| |||| ||||||||| ||||||||    
T  21479105 acactgacacgccgacacagctaataatttgaaaaaatcacacaattcagt 21479155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 21720751 - 21720801
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||||||||| |||||| ||||||| ||| |||||||||||    
T  21720751 acactgacacgccgacaccgataataatttgagaatatctcataattcagt 21720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 252 - 336
Target Start/End: Original strand, 14209106 - 14209188
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    ||||||||||||  ||||||| || | |||||||||||||||||| ||  |||  | ||||||||||||||| ||||||| ||||    
T  14209106 acacgccgacacaactaataattttaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtgtcggacac 14209188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 24633763 - 24633800
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattc 293  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  24633763 gccgacaccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 28678290 - 28678372
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    ||||| ||| |||||| | |||||||| || | |||||||||||||| ||| |||  || |||||||| ||||||||||||||||    
T  28678290 acactgacatgccgacgctgctaataatttaataaaatcacataatttagtataa--ttgtatgtgtcggtgtcgtgttggtgtc 28678372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 296
Target Start/End: Complemental strand, 32429455 - 32429402
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||| | |||| |||||| ||||||||| || ||||||||||||||||||||    
T  32429455 cgaacattgacactccgacaacgctaataatttaagaaaatcacataattcagt 32429402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 4991033 - 4990989
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||| |||||||||||||||  |||||||||| ||||||||||||    
T  4991033 acactccgacaccgctaatagtttgagaaaattacataattcagt 4990989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 11493427 - 11493383
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||| |||||||  ||||||||||||||||||||||    
T  11493427 acacgtcgacaccactaataatgtgagaaaatcacataattcagt 11493383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 11610514 - 11610558
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||| ||||||||||||| || | ||||||||||||||||||    
T  11610514 acacgccaacaccgctaataatttaaaaaaatcacataattcagt 11610558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 11665931 - 11666008
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttg 325  Q
    ||||| |||| |||||| ||||||||| |||| ||||||||| |||| ||| |||  || |||||||| |||||||||||    
T  11665931 acactaacacaccgacaacgctaataatttgataaaatcacacaatttagtgtaa--ttatatgtgtcggtgtcgtgttg 11666008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 14829677 - 14829724
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||    
T  14829677 acactgacacgccgacacagctaataatttga-aaaatcacataattca 14829724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 16192816 - 16192772
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||| ||||||||| |||||| |||||||||| ||||||||||||    
T  16192816 acacaccgacaccgttaataatttgagaaaataacataattcagt 16192772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 23870625 - 23870581
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||||| |||| ||||||| ||||||||||    
T  23870625 acacgtcgacaccgctaataatttgaaaaaatcatataattcagt 23870581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 25074782 - 25074822
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  25074782 acacgccgacaccgataataatttgagaaaatgacataatt 25074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 26508103 - 26508147
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||| ||||| |||||||| |||| ||||||||||||||||||    
T  26508103 acacgctgacacagctaataatttgaaaaaatcacataattcagt 26508147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 28917994 - 28918038
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||  |||||||| |||| ||||||||||||||||||    
T  28917994 acacgccgacatagctaataatttgaaaaaatcacataattcagt 28918038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 292
Target Start/End: Complemental strand, 32804602 - 32804566
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataatt 292  Q
    |||||||||| |||||| |||||||||||||||||||    
T  32804602 gccgacaccgttaataatttgagaaaatcacataatt 32804566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 34910310 - 34910354
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  34910310 acacgccgacacaactaataatttgaaaaaatcacataattcagt 34910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 9809 - 9737
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    |||||| || ||||||| ||||||||||||| ||||||||| ||  ||| |||||||| ||||||||||||||||    
T  9809 gccgacgccactaataatttgagaaaatcacttaattcagtgta--attatatgtgtcggtgtcgtgttggtgtc 9737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 1028 - 1103
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 329  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| ||||  | ||||||||||||| |||| |||||    
T  1028 acacaccgacaccgctaataatttgaaaaaattacataattcagtgtaac--tatatgtgtcagtgtggtgtcggtgt 1103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 13387 - 13437
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||||    
T  13387 acactgacacgccgacacaactaataatttgagaaaatcacataattcagt 13437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 21940 - 21890
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||||||    
T  21940 acactgacacgccgacacaactaataatttgagaaaatcacataattcagt 21890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 246 - 296
Target Start/End: Original strand, 51798 - 51848
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||| |||||||||||| |||||||| |||| ||||||||||||||||||    
T  51798 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagt 51848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 252 - 328
Target Start/End: Original strand, 20165 - 20239
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtg 328  Q
    |||||||||||| |||||||| |||| |||||||||||||||||| ||  |||  | ||||||||||||||| ||||    
T  20165 acacgccgacacagctaataatttgaaaaaatcacataattcagtgta--attacaagtgtcagtgtcgtgtcggtg 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 53173 - 53217
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||    
T  53173 acacgccgataccgccaataatttgagaaaatcacataattcagt 53217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 252 - 323
Target Start/End: Complemental strand, 135378 - 135309
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgt 323  Q
    |||| ||||||| |||||||| |||||||||||||||||||| || ||  ||| |||||||| |||||||||    
T  135378 acacaccgacactgctaataatttgagaaaatcacataattctgtgta--attatatgtgtcggtgtcgtgt 135309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 44584 - 44516
Alignment:
Q  259 gacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgt 329  Q
    ||||||||||| || ||||||||||||||||||||||| ||  ||| |||||||| || |||||| |||||    
T  44584 gacaccgctaaaaatttgagaaaatcacataattcagtgta--attatatgtgtcggtatcgtgtcggtgt 44516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 28834 - 28885
Alignment:
Q  243 cgaacacttacacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    |||||||| |||||||||||||| |||||| || |||||||| |||||||||    
T  28834 cgaacactaacacgccgacaccgttaataatttaagaaaatcgcataattca 28885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 293
Target Start/End: Complemental strand, 192321 - 192274
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattc 293  Q
    ||||| |||||||||||||| |||||| |||||||||| |||||||||    
T  192321 acactgacacgccgacaccgttaataatttgagaaaattacataattc 192274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 330
Target Start/End: Complemental strand, 263430 - 263362
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtc 330  Q
    |||| |||||||| ||||||||| ||||||||||||| ||  ||| || ||||||||||||||| ||||||    
T  263430 acactgctaataatttgagaaaaccacataattcagtgta--attataagtgtcagtgtcgtgtcggtgtc 263362  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 241581 - 241669
Alignment:
Q  246 acacttacacgccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    ||||| |||||||||||| |||||||| |||  |||||||||||||| ||| ||  ||| |  ||||| ||||||||||||||||| ||||    
T  241581 acactgacacgccgacacagctaataatttggaaaaatcacataatttagtgta--attatgagtgtcggtgtcgtgttggtgtcggacac 241669  T

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Target: scaffold0085 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 252 - 294
Target Start/End: Original strand, 26386 - 26428
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattca 294  Q
    ||||| ||||||| ||||||| |||||||||||||||||||||    
T  26386 acacgtcgacaccactaataatttgagaaaatcacataattca 26428  T

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Target: scaffold0136 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 256 - 336
Target Start/End: Complemental strand, 3911 - 3833
Alignment:
Q  256 gccgacaccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacac 336  Q
    |||||||| | |||||| || | |||||||||||||||||| |||  ||  | ||||||||||||||||||||||| ||||    
T  3911 gccgacacggttaataatttaaaaaaatcacataattcagtgtaa--ttacaagtgtcagtgtcgtgttggtgtcggacac 3833  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 337
Target Start/End: Complemental strand, 68299 - 68225
Alignment:
Q  261 caccgctaataaattgagaaaatcacataattcagtttaacattttatgtgtcagtgtcgtgttggtgtcgaacaca 337  Q
    ||||| |||||| |||||||||||| |||||| ||| |||  || || ||||||||||||| | |||||||||||||    
T  68299 caccgttaataatttgagaaaatcatataatttagtataa--ttataggtgtcagtgtcgtatcggtgtcgaacaca 68225  T

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Target: scaffold0697 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 292
Target Start/End: Original strand, 1637 - 1677
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataatt 292  Q
    |||||||||||||| |||||| |||||||||||| ||||||    
T  1637 acacgccgacaccgttaataatttgagaaaatcatataatt 1677  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 14523 - 14567
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||  ||||||| |||| ||||||||||||||||||    
T  14523 acacgccgacacaactaataatttgaaaaaatcacataattcagt 14567  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Complemental strand, 33429 - 33385
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| |||||||| |||| ||||| ||||||||||||    
T  33429 acacgccgacacagctaataatttgaaaaaataacataattcagt 33385  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 63774 - 63810
Alignment:
Q  260 acaccgctaataaattgagaaaatcacataattcagt 296  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  63774 acaccgctaataatttgagaaaattacataattcagt 63810  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 252 - 296
Target Start/End: Original strand, 46675 - 46719
Alignment:
Q  252 acacgccgacaccgctaataaattgagaaaatcacataattcagt 296  Q
    |||||||||||| | |||||| |||| ||||||||||||||||||    
T  46675 acacgccgacacagttaataatttgaaaaaatcacataattcagt 46719  T

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