View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11418_high_8 (Length: 250)
Name: NF11418_high_8
Description: NF11418
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11418_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 6368089 - 6367850
Alignment:
| Q |
1 |
cttcttctaagagttacaacataaattgaaatctttaggggaatttatatatcattatcagttttaattccttatgagtgaagatatgaaatgataagac |
100 |
Q |
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| T |
6368089 |
cttcttctaagagttacaacataaattgaaatctttaggggaatttatatatcatgatcagttttaattccttatgagggaagatatgaaatgataagac |
6367990 |
T |
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| Q |
101 |
acattattaaagttcaagattggataacgtttcaattattaattagaagatatatatttttcatataccaatgtattaaaatannnnnnnaaagtagcag |
200 |
Q |
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| T |
6367989 |
acattattaaagttcaagattggataacgtttcaattattaattagaagatatatatttttcatataccaatgtattaaaatatttttttaaagtagcag |
6367890 |
T |
|
| Q |
201 |
cattaagggaatagaaaaattatggcacattatacctatg |
240 |
Q |
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|||||||||||||||||||||||||||||||| ||||||| |
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| T |
6367889 |
cattaagggaatagaaaaattatggcacattagacctatg |
6367850 |
T |
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