View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11419_low_14 (Length: 296)

Name: NF11419_low_14
Description: NF11419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11419_low_14
NF11419_low_14
[»] chr1 (21 HSPs)
chr1 (9-279)||(9515121-9515394)
chr1 (136-189)||(18556386-18556439)
chr1 (140-189)||(2218297-2218346)
chr1 (136-189)||(6427540-6427593)
chr1 (136-189)||(9828120-9828173)
chr1 (136-189)||(32461394-32461447)
chr1 (136-189)||(37598896-37598949)
chr1 (136-189)||(12919010-12919063)
chr1 (136-189)||(40917825-40917878)
chr1 (136-188)||(1486646-1486698)
chr1 (136-188)||(17778618-17778670)
chr1 (137-189)||(18337395-18337447)
chr1 (136-188)||(29163323-29163375)
chr1 (141-188)||(42359391-42359438)
chr1 (140-190)||(3490347-3490397)
chr1 (140-186)||(48040418-48040464)
chr1 (136-185)||(5898211-5898260)
chr1 (144-189)||(16812629-16812674)
chr1 (136-189)||(34712324-34712377)
chr1 (162-194)||(5927276-5927308)
chr1 (141-189)||(15765828-15765876)
[»] chr3 (21 HSPs)
chr3 (136-189)||(41961580-41961633)
chr3 (136-189)||(14216968-14217021)
chr3 (136-189)||(14223097-14223150)
chr3 (136-189)||(8101893-8101946)
chr3 (140-189)||(11610578-11610627)
chr3 (136-189)||(27505316-27505369)
chr3 (136-189)||(34185053-34185106)
chr3 (136-189)||(55401140-55401193)
chr3 (141-189)||(4466541-4466589)
chr3 (136-188)||(4987222-4987274)
chr3 (136-188)||(28918068-28918120)
chr3 (136-189)||(10955017-10955073)
chr3 (135-189)||(17276791-17276845)
chr3 (139-189)||(40052380-40052430)
chr3 (136-189)||(15999951-16000004)
chr3 (136-189)||(18427014-18427067)
chr3 (136-189)||(20503530-20503583)
chr3 (140-189)||(25074864-25074913)
chr3 (143-188)||(29508522-29508567)
chr3 (144-189)||(49651717-49651762)
chr3 (162-190)||(28779656-28779684)
[»] scaffold0003 (1 HSPs)
scaffold0003 (136-189)||(241670-241723)
[»] chr7 (17 HSPs)
chr7 (136-189)||(598273-598326)
chr7 (136-189)||(5409772-5409825)
chr7 (140-189)||(7133213-7133262)
chr7 (136-189)||(21880217-21880270)
chr7 (140-189)||(41229238-41229287)
chr7 (136-189)||(43027405-43027458)
chr7 (137-189)||(9778571-9778623)
chr7 (140-183)||(18215144-18215187)
chr7 (135-189)||(32287404-32287458)
chr7 (136-189)||(1433524-1433577)
chr7 (136-189)||(15680874-15680927)
chr7 (136-189)||(21864873-21864926)
chr7 (136-189)||(24339718-24339771)
chr7 (136-189)||(29763130-29763183)
chr7 (140-189)||(40131940-40131989)
chr7 (141-189)||(6490786-6490834)
chr7 (153-189)||(29812599-29812635)
[»] chr6 (21 HSPs)
chr6 (144-189)||(7378052-7378097)
chr6 (136-189)||(8365449-8365502)
chr6 (136-189)||(10339055-10339108)
chr6 (136-189)||(17435275-17435328)
chr6 (140-187)||(9025448-9025495)
chr6 (141-179)||(33340895-33340933)
chr6 (136-189)||(17327591-17327644)
chr6 (136-189)||(17841530-17841583)
chr6 (156-189)||(21424745-21424778)
chr6 (136-190)||(31384995-31385049)
chr6 (136-190)||(31959215-31959269)
chr6 (141-179)||(35125165-35125203)
chr6 (136-189)||(8776909-8776962)
chr6 (136-189)||(10294183-10294236)
chr6 (136-189)||(28152163-28152216)
chr6 (136-189)||(28715360-28715413)
chr6 (136-189)||(34595199-34595252)
chr6 (141-189)||(7248439-7248487)
chr6 (141-189)||(9629464-9629512)
chr6 (137-189)||(10770608-10770660)
chr6 (137-189)||(16766774-16766826)
[»] chr4 (25 HSPs)
chr4 (136-189)||(14465006-14465059)
chr4 (135-187)||(28084588-28084640)
chr4 (139-185)||(3712458-3712504)
chr4 (136-189)||(23292927-23292980)
chr4 (136-188)||(19312411-19312463)
chr4 (143-189)||(37203324-37203370)
chr4 (136-189)||(715546-715599)
chr4 (136-189)||(752872-752925)
chr4 (136-189)||(19482744-19482797)
chr4 (136-189)||(22234820-22234873)
chr4 (139-188)||(22440559-22440608)
chr4 (140-189)||(24343582-24343631)
chr4 (136-189)||(29205533-29205586)
chr4 (141-185)||(16886677-16886721)
chr4 (141-189)||(18513176-18513224)
chr4 (142-189)||(5922532-5922579)
chr4 (142-189)||(8423659-8423706)
chr4 (142-189)||(11596298-11596345)
chr4 (136-190)||(3947701-3947755)
chr4 (136-189)||(3064869-3064922)
chr4 (144-189)||(28964189-28964234)
chr4 (136-189)||(30982808-30982861)
chr4 (136-189)||(34306745-34306798)
chr4 (136-189)||(35161101-35161154)
chr4 (137-189)||(18966575-18966627)
[»] chr2 (18 HSPs)
chr2 (136-189)||(26769587-26769640)
chr2 (137-189)||(42511323-42511375)
chr2 (136-189)||(21782745-21782798)
chr2 (136-189)||(28412422-28412475)
chr2 (136-189)||(28596534-28596587)
chr2 (136-189)||(35056944-35056997)
chr2 (140-189)||(37419823-37419872)
chr2 (136-188)||(2438661-2438713)
chr2 (141-189)||(24975256-24975304)
chr2 (137-189)||(38117100-38117152)
chr2 (142-189)||(11223794-11223841)
chr2 (142-185)||(23058389-23058432)
chr2 (134-189)||(37559040-37559095)
chr2 (135-189)||(32749755-32749809)
chr2 (136-189)||(18840954-18841007)
chr2 (141-190)||(23718089-23718138)
chr2 (141-190)||(24105761-24105810)
chr2 (136-189)||(30717460-30717513)
[»] scaffold0123 (1 HSPs)
scaffold0123 (137-189)||(44455-44507)
[»] chr5 (11 HSPs)
chr5 (136-189)||(21576686-21576739)
chr5 (136-187)||(39268541-39268592)
chr5 (136-186)||(30183625-30183675)
chr5 (136-189)||(31084393-31084446)
chr5 (136-189)||(32766873-32766926)
chr5 (136-189)||(43564946-43564999)
chr5 (137-189)||(14873588-14873640)
chr5 (142-189)||(19820329-19820376)
chr5 (137-188)||(21190998-21191049)
chr5 (138-182)||(17088358-17088402)
chr5 (137-189)||(42893426-42893478)
[»] chr8 (16 HSPs)
chr8 (136-188)||(3025616-3025668)
chr8 (141-189)||(27213595-27213643)
chr8 (144-189)||(15816059-15816104)
chr8 (136-189)||(22652052-22652105)
chr8 (140-189)||(39820498-39820546)
chr8 (136-186)||(5813657-5813707)
chr8 (135-185)||(22197676-22197726)
chr8 (136-189)||(8343392-8343445)
chr8 (136-189)||(11803335-11803388)
chr8 (136-189)||(18407784-18407837)
chr8 (136-189)||(21465488-21465541)
chr8 (140-189)||(24413500-24413549)
chr8 (136-189)||(26902105-26902158)
chr8 (136-189)||(29447520-29447573)
chr8 (140-189)||(29510234-29510283)
chr8 (141-189)||(30067969-30068017)
[»] scaffold0793 (1 HSPs)
scaffold0793 (136-189)||(4822-4875)
[»] scaffold0380 (1 HSPs)
scaffold0380 (136-189)||(8666-8719)
[»] scaffold0053 (1 HSPs)
scaffold0053 (136-189)||(8863-8916)
[»] scaffold0019 (1 HSPs)
scaffold0019 (137-189)||(71802-71854)
[»] scaffold0450 (1 HSPs)
scaffold0450 (139-194)||(8560-8615)
[»] scaffold0652 (1 HSPs)
scaffold0652 (140-190)||(402-452)
[»] scaffold0475 (1 HSPs)
scaffold0475 (147-189)||(3384-3426)
[»] scaffold0361 (1 HSPs)
scaffold0361 (136-203)||(14592-14660)
[»] scaffold0044 (1 HSPs)
scaffold0044 (135-183)||(53255-53303)


Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 9 - 279
Target Start/End: Original strand, 9515121 - 9515394
Alignment:
Q  9 agcatagggagattcaaccaatttcctgaaatcaaaacatacaaaaattgacaaagctttgctcatattacatactagaaataaataaataattaaggta 108  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9515121 agcatagggagattcaaccaatttcctgaaatgaaaacatacaaaaattgacaaagctttgctcatattacatactagaaataaataaataattaaggta 9515220  T
Q  109 ccattgacagctcatattacaaaaattgacacgtgtccgacactgggacacggctaat---ctgagaagtgtccgtgcttcataaattttaacattgtta 205  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   |  |||||||| |||| |||||| |||||||||||||||    
T  9515221 ccattgacagctcatattacaaaaattgacacgtgtctgacactgggacacggctaattaacccagaagtgttcgtgattcatagattttaacattgtta 9515320  T
Q  206 agatcaataatggcacgatattacataccttaggtacttgatcaatgatccaccagacaaagcaacagtgaaat 279  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9515321 aggtcaataatggcacgatattacataccttaggtacttgatcaatgatccaccagacaaagcaacagtgaaat 9515394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 18556439 - 18556386
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||| ||||||||||||||||| |||||| |||||||||||||||||||||    
T  18556439 gacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcata 18556386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 2218297 - 2218346
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||||||||    
T  2218297 cgtgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcata 2218346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 6427540 - 6427593
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||||||  |||||||||||||||||    
T  6427540 gacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcata 6427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 9828120 - 9828173
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  9828120 gacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 32461447 - 32461394
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| |||||||||||||| ||||||  ||||||||||||||||||||    
T  32461447 gacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcata 32461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 37598896 - 37598949
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||    
T  37598896 gacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcata 37598949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 12919010 - 12919063
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| ||||| ||||||||||| ||| ||||||||| |||||||||||    
T  12919010 gacacgtgtctgacacggggacacggcttatccgagaagtgttcgtgcttcata 12919063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 40917825 - 40917878
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||| ||| | |||||||||||||||    
T  40917825 gacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 1486698 - 1486646
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    |||||||||||||||| |||||||| |||||| ||| |||||| |||||||||    
T  1486698 gacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 17778618 - 17778670
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    |||||||||||||||| |||||| | |||||| ||||||||| ||||||||||    
T  17778618 gacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 18337395 - 18337447
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||||||||| | || ||| ||| |||||||||||||||||    
T  18337395 acacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcata 18337447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 29163375 - 29163323
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    |||||||| | ||||| ||||||||||||||| ||||||||| ||||||||||    
T  29163375 gacacgtgcctgacaccgggacacggctaatcagagaagtgttcgtgcttcat 29163323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 42359438 - 42359391
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    ||||||||||| |||||||| |||||| ||| ||||||||||||||||    
T  42359438 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 3490397 - 3490347
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcataa 190  Q
    ||||||||||| ||||||||  |||||| ||||||||||||||||| ||||    
T  3490397 cgtgtccgacattgggacacatctaatccgagaagtgtccgtgctttataa 3490347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 186
Target Start/End: Complemental strand, 48040464 - 48040418
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttc 186  Q
    ||||||||||||||||||||| |||||  ||| ||||||||||||||    
T  48040464 cgtgtccgacactgggacacgcctaattggaggagtgtccgtgcttc 48040418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 5898260 - 5898211
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgctt 185  Q
    ||||||||||| |||| |||||||| |||||| ||| |||||||||||||    
T  5898260 gacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 16812629 - 16812674
Alignment:
Q  144 tccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| || |||||||| |||||||||| |||||||||||||||||    
T  16812629 tccgaaaccgggacacgcctaatctgaggagtgtccgtgcttcata 16812674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 34712377 - 34712324
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||| ||||||||||||| |||||   || |||||||||||||||||    
T  34712377 gacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcata 34712324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 5927308 - 5927276
Alignment:
Q  162 ctaatctgagaagtgtccgtgcttcataaattt 194  Q
    |||||||||| ||||||||||||||||||||||    
T  5927308 ctaatctgaggagtgtccgtgcttcataaattt 5927276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 15765828 - 15765876
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| |||||||||||||| |||||| ||  |||||||||||||||||    
T  15765828 gtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcata 15765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 3e-17; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 41961633 - 41961580
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  41961633 gacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcata 41961580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 14216968 - 14217021
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||| ||||||||||||||  |||||| |||||||||||||||||||||    
T  14216968 gacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 14223097 - 14223150
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||| ||||||||||||||  |||||| |||||||||||||||||||||    
T  14223097 gacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 8101946 - 8101893
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| |||||||| ||||| |||||||||| ||||| |||||||||||    
T  8101946 gacacgtgtcggacactggtacacgtctaatctgaggagtgttcgtgcttcata 8101893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 11610578 - 11610627
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||  |||||||| |||||||||| |||||||||||||||||    
T  11610578 cgtgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcata 11610627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 27505316 - 27505369
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||| | |||||| ||| |||||||||||||||||    
T  27505316 gacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcata 27505369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 34185106 - 34185053
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||| ||||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  34185106 gacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 55401140 - 55401193
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| | |||||| |||||| ||| |||||||||||||||||    
T  55401140 gacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 4466589 - 4466541
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||||| ||  ||| |||||||||||||||||    
T  4466589 gtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcata 4466541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 4987274 - 4987222
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    |||||||||||||||| |||||||| |||||| ||| ||||||||| ||||||    
T  4987274 gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 28918068 - 28918120
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    ||||||||||||||||||||||||| ||||||  || ||||||| ||||||||    
T  28918068 gacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 10955017 - 10955073
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatc---tgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||||||| ||||||    ||| |||||||||||||||||    
T  10955017 gacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcata 10955073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Original strand, 17276791 - 17276845
Alignment:
Q  135 tgacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||| | ||| |  |||||| |||||||||||||||||||||    
T  17276791 tgacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcata 17276845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 40052380 - 40052430
Alignment:
Q  139 acgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||| |||||||| |||||| ||| ||||| |||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcata 40052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 16000004 - 15999951
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| ||||||  || ||||||||||| |||||    
T  16000004 gacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 18427014 - 18427067
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||| ||| |||||||  |||||||||| |||||||||| ||||||    
T  18427014 gacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcata 18427067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 20503530 - 20503583
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| |||| ||||| |||||||| |||||| ||| |||||||||||||||||    
T  20503530 gacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 20503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 25074864 - 25074913
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||  |||||| ||| ||||| |||||||||||    
T  25074864 cgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 25074913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 188
Target Start/End: Original strand, 29508522 - 29508567
Alignment:
Q  143 gtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    ||||||||| |||||||| ||||||  |||||||||||||||||||    
T  29508522 gtccgacaccgggacacgtctaatccaagaagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 49651762 - 49651717
Alignment:
Q  144 tccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||| |||||||  |||||| |||||||||||||||||||||    
T  49651762 tccgacaccgggacacacctaatccgagaagtgtccgtgcttcata 49651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 28779656 - 28779684
Alignment:
Q  162 ctaatctgagaagtgtccgtgcttcataa 190  Q
    |||||||||||||||||||||||||||||    
T  28779656 ctaatctgagaagtgtccgtgcttcataa 28779684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 241670 - 241723
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  241670 gacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 241723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 598273 - 598326
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  598273 gacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 5409825 - 5409772
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  5409825 gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 5409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 7133262 - 7133213
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||  |||||||||| || ||||||||||||||    
T  7133262 cgtgtccgacactgggacacacctaatctgaggagcgtccgtgcttcata 7133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 21880217 - 21880270
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| ||||||||||  ||||||| |||||| |||||||||||||||||||||    
T  21880217 gacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcata 21880270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 41229287 - 41229238
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||| ||||| |||||| ||||| ||||||||||||||||||||||    
T  41229287 cgtgtccgtcactgcgacacgcctaatatgagaagtgtccgtgcttcata 41229238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 43027458 - 43027405
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||| ||  |||||||||||||||||    
T  43027458 gacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcata 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 9778571 - 9778623
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||| |||||||| ||||||  || |||||||||||||||||    
T  9778571 acacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 18215187 - 18215144
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgc 183  Q
    |||||||||||| |||||||| |||||||||| |||||||||||    
T  18215187 cgtgtccgacaccgggacacgcctaatctgaggagtgtccgtgc 18215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 32287458 - 32287404
Alignment:
Q  135 tgacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| ||||||||||| |||||||  |||||| ||| |||||||||||||||||    
T  32287458 tgacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 1433524 - 1433577
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||| |||||||||||  ||||||| |||||| ||| |||||||||||||||||    
T  1433524 gacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcata 1433577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 15680874 - 15680927
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| | |||||| |||||  ||| |||||||||||||||||    
T  15680874 gacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcata 15680927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 21864873 - 21864926
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||  ||| |||||| ||||||||||    
T  21864873 gacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcata 21864926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 24339718 - 24339771
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||| |||||||| |||||||| |||||| ||| |||| ||||||||||||    
T  24339718 gacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcata 24339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 29763183 - 29763130
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||   ||||||| |||||| ||| |||||||||||||||||    
T  29763183 gacacgtgtccgacatcaggacacgcctaatccgaggagtgtccgtgcttcata 29763130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 40131989 - 40131940
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||| |||||||| |||||| ||| |||||| ||||||||||    
T  40131989 cgtgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcata 40131940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 6490786 - 6490834
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||| ||||||||  ||||| ||| |||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcata 6490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 29812635 - 29812599
Alignment:
Q  153 gggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||| |||||| |||||||||||||||||||||    
T  29812635 gggacacgcctaatccgagaagtgtccgtgcttcata 29812599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 144 - 189
Target Start/End: Original strand, 7378052 - 7378097
Alignment:
Q  144 tccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  7378052 tccgacaccgggacacggctaatctgagaagtgtccgtgcttcata 7378097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 8365502 - 8365449
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||||||| |||||| ||| ||| |||||||||||||    
T  8365502 gacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcata 8365449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 10339108 - 10339055
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| ||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  10339108 gacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 10339055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 17435275 - 17435328
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||    
T  17435275 gacacgtgttcgacactgggacacgtctaatctgaaaagtgtccgtacttcata 17435328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 9025495 - 9025448
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttca 187  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||    
T  9025495 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 179
Target Start/End: Complemental strand, 33340933 - 33340895
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtcc 179  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  33340933 gtgtccgacactgggacacgtctaatctgagaagtgtcc 33340895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 17327644 - 17327591
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| ||||| |||||||| |||||| ||| |||||||||||||||||    
T  17327644 gacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcata 17327591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 17841583 - 17841530
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||| ||||||||||||| |||||| |||||| ||| |||||||||||||||||    
T  17841583 gacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 189
Target Start/End: Complemental strand, 21424778 - 21424745
Alignment:
Q  156 acacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||||||||||||||||    
T  21424778 acacggctaatctgagaagtgtccgtgcttcata 21424745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 31384995 - 31385049
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcataa 190  Q
    ||||||||||| |||| |||||||| ||||||  || ||||||||||||||||||    
T  31384995 gacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcataa 31385049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 31959215 - 31959269
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcataa 190  Q
    |||| ||||||||||| |||||||  |||||| ||| ||||||||||||||||||    
T  31959215 gacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataa 31959269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 141 - 179
Target Start/End: Original strand, 35125165 - 35125203
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtcc 179  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  35125165 gtgtccgacactgggacacgtctattctgagaagtgtcc 35125203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 8776962 - 8776909
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| | |||||  |||||| ||| |||||||||||||||||    
T  8776962 gacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcata 8776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 10294183 - 10294236
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||| |||||||| ||| |||||| ||||||||||| |||||| ||||||||||    
T  10294183 gacatgtgtccgaaactaggacacagctaatctgaggagtgtctgtgcttcata 10294236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 28152163 - 28152216
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||| | |||||| ||| ||||| |||||||||||    
T  28152163 gacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcata 28152216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 28715360 - 28715413
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||| |||||| |||||||| |||||  ||||||||| |||||||||||    
T  28715360 gacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcata 28715413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 34595199 - 34595252
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| ||||| |||||||  |||||| ||| |||||||||||||||||    
T  34595199 gacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcata 34595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 7248439 - 7248487
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||| |||||||| | |||| ||| |||||||||||||||||    
T  7248439 gtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcata 7248487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 9629464 - 9629512
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||| |||||| |||||| ||| ||||||| |||||||||    
T  9629464 gtgtccgacactgagacacgtctaatccgaggagtgtccatgcttcata 9629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 10770660 - 10770608
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||  | |||||| | |||||||||| |||||||||||||||||    
T  10770660 acacgtgtccgatgccgggacatgcctaatctgaggagtgtccgtgcttcata 10770608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 16766774 - 16766826
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||| |||||||| |||||| ||  | |||||||||||||||    
T  16766774 acacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcata 16766826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 14465059 - 14465006
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  14465059 gacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 28084588 - 28084640
Alignment:
Q  135 tgacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttca 187  Q
    |||||||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  28084588 tgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 3712504 - 3712458
Alignment:
Q  139 acgtgtccgacactgggacacggctaatctgagaagtgtccgtgctt 185  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  3712504 acgtgtccgacaccgggacacggctaatctgaggagtgtccgtgctt 3712458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 23292980 - 23292927
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  23292980 gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 19312411 - 19312463
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    |||||||||||||||| | |||||| ||||||||||||||||||||| |||||    
T  19312411 gacacgtgtccgacaccgagacacgtctaatctgagaagtgtccgtgtttcat 19312463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 189
Target Start/End: Original strand, 37203324 - 37203370
Alignment:
Q  143 gtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||| |||||||| |||||| |||||||||||||||||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcata 37203370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 715599 - 715546
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| |||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  715599 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 752925 - 752872
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| |||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  752925 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 752872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 19482744 - 19482797
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||||||  |||||| ||| ||||| |||||||||||    
T  19482744 gacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 19482797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 22234873 - 22234820
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||  |||||| ||||||| ||||||||| |||||||||||    
T  22234873 gacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcata 22234820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 22440608 - 22440559
Alignment:
Q  139 acgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    |||||||||||||| ||||||| |||||| ||| ||||||||||||||||    
T  22440608 acgtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 24343582 - 24343631
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||| |||||||| ||| |||||| |||||||||||||||||    
T  24343582 cgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcata 24343631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 29205533 - 29205586
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| ||||||||||||||||||| |||||| ||| ||||| |||||||||||    
T  29205533 gacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcata 29205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 16886677 - 16886721
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgctt 185  Q
    ||||||||||| || ||||||||||||| ||||||||||||||||    
T  16886677 gtgtccgacaccggaacacggctaatctcagaagtgtccgtgctt 16886721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 18513224 - 18513176
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||  ||||||| |||||||||| |||||||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcata 18513176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 5922579 - 5922532
Alignment:
Q  142 tgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||| |||||||||| ||||||  |||||||||    
T  5922579 tgtccgacactgggacacgcctaatctgaggagtgtctctgcttcata 5922532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 8423706 - 8423659
Alignment:
Q  142 tgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| |||||||| |||||| ||||||||||||||| |||||    
T  8423706 tgtccgacaccgggacacgcctaatcggagaagtgtccgtgcgtcata 8423659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 11596345 - 11596298
Alignment:
Q  142 tgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||  |||||||| |||||||||| |||||||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcata 11596298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 3947755 - 3947701
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcataa 190  Q
    ||||||||||||||||  ||||||  |||||| ||| ||||||||||||||||||    
T  3947755 gacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcataa 3947701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 3064922 - 3064869
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| |||||||| ||| |||||| |||||| ||| |||||||||||||||||    
T  3064922 gacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcata 3064869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 28964234 - 28964189
Alignment:
Q  144 tccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||| |||||| ||| ||||||| |||||||||    
T  28964234 tccgacactgggacacgcctaatccgaggagtgtccatgcttcata 28964189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 30982861 - 30982808
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| ||||||  |  |||||||||||||||||    
T  30982861 gacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 34306798 - 34306745
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| | |||||| |||||||||| | ||| |||||||||||    
T  34306798 gacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcata 34306745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 35161101 - 35161154
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| || ||||  |||||| || ||||||||||||||||||    
T  35161101 gacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcata 35161154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 18966575 - 18966627
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||  |||| ||| ||||||| || |||||||||||||||||    
T  18966575 acacgtgtccgacaacgggatacgcctaatctaaggagtgtccgtgcttcata 18966627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 26769587 - 26769640
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||    
T  26769587 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcata 26769640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 42511375 - 42511323
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  42511375 acacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcata 42511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 21782798 - 21782745
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||| |||| |||||||| |||||||| | |||||||||||||||||    
T  21782798 gacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcata 21782745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 28412422 - 28412475
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||||||||||||||||||  ||| || ||| ||||||||||    
T  28412422 gacacgtgtccgacactgggacacggctaattcgaggagcgtcagtgcttcata 28412475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 28596534 - 28596587
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||| ||||||  |||||| ||| |||||||||||||||||    
T  28596534 gacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 35056944 - 35056997
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |  ||||| |||||||||| |||||||||||||||||    
T  35056944 gacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcata 35056997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 37419823 - 37419872
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  37419823 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 188
Target Start/End: Complemental strand, 2438713 - 2438661
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    ||||| |||||||||| |||||||| |||||| ||| ||||||||||||||||    
T  2438713 gacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 24975304 - 24975256
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||   |||||||||| |||||||||||||||||    
T  24975304 gtgtccgacactgggacaaatctaatctgaggagtgtccgtgcttcata 24975256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 38117152 - 38117100
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||| |||||||| |||||| |||  ||||||||||||||||    
T  38117152 acacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcata 38117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 11223841 - 11223794
Alignment:
Q  142 tgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||| ||||| |||||||| |||||||||| |||||||||||||||||    
T  11223841 tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcata 11223794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 23058432 - 23058389
Alignment:
Q  142 tgtccgacactgggacacggctaatctgagaagtgtccgtgctt 185  Q
    |||||||||| |||||||| |||||| |||||||||||||||||    
T  23058432 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgctt 23058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 189
Target Start/End: Original strand, 37559040 - 37559095
Alignment:
Q  134 ttgacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||||| || |||||  ||||| ||| |||||||||||||||||    
T  37559040 ttgacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcata 37559095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 32749809 - 32749755
Alignment:
Q  135 tgacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| |||||||||||||||||||| || |||| || |||||||| ||||||||    
T  32749809 tgacatgtgtccgacactgggacacgccttatctaaggagtgtccgcgcttcata 32749755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 18841007 - 18840954
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| |||||||||| |||||||  |||||| ||| |||||||||||||||||    
T  18841007 gacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 18840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 23718089 - 23718138
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcataa 190  Q
    ||||| |||||||||| ||  ||||||||||||||||||||| |||||||    
T  23718089 gtgtctgacactgggaaacacctaatctgagaagtgtccgtgtttcataa 23718138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 24105761 - 24105810
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcataa 190  Q
    ||||| |||||||||| ||  ||||||||||||||||||||| |||||||    
T  24105761 gtgtctgacactgggaaacacctaatctgagaagtgtccgtgtttcataa 24105810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 30717513 - 30717460
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||| ||||||||||| ||| ||||||  || |||||||||||||||||    
T  30717513 gacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcata 30717460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 189
Target Start/End: Complemental strand, 44507 - 44455
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||||||||| || |||||||||||||||| ||||||||||    
T  44507 acacgtgtccgacactgggacatggttaatctgagaagtgtctgtgcttcata 44455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 21576739 - 21576686
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| |||||||||||||| |||||| ||| |||||||||||||||||    
T  21576739 gacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcata 21576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 187
Target Start/End: Complemental strand, 39268592 - 39268541
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttca 187  Q
    |||| |||||||||||||||||||| |||||| ||| |||||||||||||||    
T  39268592 gacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 30183625 - 30183675
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttc 186  Q
    ||||||||||||||||||||||||| |||||  |||||||||| |||||||    
T  30183625 gacacgtgtccgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 31084393 - 31084446
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||||| | |||||| ||| |||||||||| ||||||    
T  31084393 gacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcata 31084446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 32766926 - 32766873
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||  ||| ||| |||||||||| |||||||||||||||||    
T  32766926 gacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcata 32766873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 43564946 - 43564999
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||| ||||||||| | |||||||| |||||| |||||||||||||||||||||    
T  43564946 gacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcata 43564999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 14873588 - 14873640
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| |||| |||||||| |||||| ||| |||||||||||||||||    
T  14873588 acacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 19820376 - 19820329
Alignment:
Q  142 tgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcata 19820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 188
Target Start/End: Complemental strand, 21191049 - 21190998
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    ||||||||||||| | |||||||| |||||| ||| ||||||||||||||||    
T  21191049 acacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 182
Target Start/End: Original strand, 17088358 - 17088402
Alignment:
Q  138 cacgtgtccgacactgggacacggctaatctgagaagtgtccgtg 182  Q
    |||||||||||||| |||||||| |||||| ||| ||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 42893426 - 42893478
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||  ||||||| ||||| |||| ||||||| |||||||||    
T  42893426 acacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcata 42893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000007; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 3025616 - 3025668
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcat 188  Q
    |||||||||| ||||||| ||||||||||||| ||| ||||||||||||||||    
T  3025616 gacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 27213595 - 27213643
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| ||||| ||||||||||||||| |||||||||||||||||||||    
T  27213595 gtgtcggacaccgggacacggctaatccgagaagtgtccgtgcttcata 27213643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 15816104 - 15816059
Alignment:
Q  144 tccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||    
T  15816104 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 22652052 - 22652105
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||| ||||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  22652052 gacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 189
Target Start/End: Original strand, 39820498 - 39820546
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||| |||||||| |||||| |||||||||||||||||||||    
T  39820498 cgtgtccgacac-gggacacgcctaatccgagaagtgtccgtgcttcata 39820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 186
Target Start/End: Original strand, 5813657 - 5813707
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttc 186  Q
    |||||||||||||||| |||||||| |||||  ||| ||||||||||||||    
T  5813657 gacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 22197726 - 22197676
Alignment:
Q  135 tgacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgctt 185  Q
    ||||||||||||||||| ||  |||| |||||||||| |||||||||||||    
T  22197726 tgacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctt 22197676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 8343392 - 8343445
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| |||||||| |||||| ||  |||||| ||||||||||    
T  8343392 gacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcata 8343445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 11803335 - 11803388
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| |||||||||| || ||||| |||||| ||| |||||||||||||||||    
T  11803335 gacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcata 11803388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 18407784 - 18407837
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| ||||||||||| ||||||| |||||  ||| |||||||||||||||||    
T  18407784 gacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcata 18407837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 21465488 - 21465541
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||| |||| |||| ||| ||||| |||| |||||||||||||||||    
T  21465488 gacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcata 21465541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 24413549 - 24413500
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||| |||  |||||||| |||||| |||||||||||||||||||||    
T  24413549 cgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcata 24413500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 26902158 - 26902105
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||| | ||| |||||||| || ||||||| |||||||||||||||||    
T  26902158 gacacgtgtctggcacggggacacgccttatctgaggagtgtccgtgcttcata 26902105  T

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Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 29447520 - 29447573
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||| ||||||||||| |||||| | |||||| ||| |||||||||||||||||    
T  29447520 gacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcata 29447573  T

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Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 29510283 - 29510234
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||| |||||||  |||||| ||| |||||||||||||||||    
T  29510283 cgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 29510234  T

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Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 30068017 - 30067969
Alignment:
Q  141 gtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||||||  |||||| ||  |||||||||||||||||    
T  30068017 gtgtccgacactgggacacacctaatccgatgagtgtccgtgcttcata 30067969  T

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Target: scaffold0793 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 4875 - 4822
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||| |||||||||| |||||||| |||||| ||| |||||||||||||||||    
T  4875 gacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 4822  T

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Target: scaffold0380 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 8666 - 8719
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||||||||| ||| ||||||  || |||||||||||||||||    
T  8666 gacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcata 8719  T

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Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 8863 - 8916
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||||| | |||||| |||||||||| ||| |||||||||||||    
T  8863 gacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcata 8916  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 189
Target Start/End: Original strand, 71802 - 71854
Alignment:
Q  137 acacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    ||||||||||||||| |||||||| |||||| ||| |||||| ||||||||||    
T  71802 acacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcata 71854  T

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Target: scaffold0450 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 8615 - 8560
Alignment:
Q  139 acgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcataaattt 194  Q
    |||||||||||||||| ||||| |||||  ||| ||||||||||||||||| ||||    
T  8615 acgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatagattt 8560  T

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Target: scaffold0652 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 452 - 402
Alignment:
Q  140 cgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcataa 190  Q
    |||||||||||| |||||||  |||||| ||| ||||||||||||||||||    
T  452 cgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataa 402  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 3384 - 3426
Alignment:
Q  147 gacactgggacacggctaatctgagaagtgtccgtgcttcata 189  Q
    |||||||||||||| |||||| ||| |||||||||||||||||    
T  3384 gacactgggacacgcctaatccgaggagtgtccgtgcttcata 3426  T

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Target: scaffold0361 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 203
Target Start/End: Original strand, 14592 - 14660
Alignment:
Q  136 gacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgcttcata-aattttaacattgt 203  Q
    |||||||||||||||| | |||||| ||||||  || ||||| ||||||||||| ||||| ||||||||    
T  14592 gacacgtgtccgacaccgagacacgcctaatcgaaggagtgtacgtgcttcatagaatttaaacattgt 14660  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 53255 - 53303
Alignment:
Q  135 tgacacgtgtccgacactgggacacggctaatctgagaagtgtccgtgc 183  Q
    ||||||||||||||||| ||||||||  |||||  ||||||||||||||    
T  53255 tgacacgtgtccgacaccgggacacgtttaatccaagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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