View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11419_low_17 (Length: 226)
Name: NF11419_low_17
Description: NF11419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11419_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 19081645 - 19081820
Alignment:
| Q |
1 |
ccccaatccaatcaagaactaaattacacatttatactttaaaattagttgtgcaactatcatagtcttctagataatcaagttggtacatcattatttc |
100 |
Q |
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| T |
19081645 |
ccccaatccaatcaagaactaaattacacatttatactttaaaattagttgtgcaactatcataatcttctagataatcaagttggtacatcattatttc |
19081744 |
T |
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| Q |
101 |
caacatggcttctaatctaatctagtatcttatggtgctatgtacttccaaacattccagattgatgagtactatg |
176 |
Q |
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| T |
19081745 |
caacatggcttctaatctaatctagtatcttatggtgctatgtacttccaaacattccagattgatgagtactatg |
19081820 |
T |
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