View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11419_low_19 (Length: 208)
Name: NF11419_low_19
Description: NF11419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11419_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 14 - 190
Target Start/End: Original strand, 47518143 - 47518320
Alignment:
| Q |
14 |
agaccattatttgggtatgttaacataagactttgacaagcacatcatgcgggtgaacctggacttgagagtttcacataatgcagaaacattatacaac |
113 |
Q |
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| T |
47518143 |
agaccattatttgggtatgttaacataagactttgacaagcacatcatgcgggtgaacctggacttgagagtttcacataatgcagaaacattatacaac |
47518242 |
T |
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| Q |
114 |
ctttacgcataatgttttacaaaacaatatacatagagggaatcaagtacaaatgtatttctta-tatttaagcttaa |
190 |
Q |
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| T |
47518243 |
ctttccgcataatgttttacaaaacaatatacatagagagaatcaagtacaaatgtatttcttagtatttaagcttaa |
47518320 |
T |
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