View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11419_low_20 (Length: 207)
Name: NF11419_low_20
Description: NF11419
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11419_low_20 |
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Alignment Details
Target: chr5 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 19 - 192
Target Start/End: Original strand, 34562602 - 34562775
Alignment:
| Q |
19 |
ccttacacaattcaaatctcttcactttcaatttcacttcatcatttgaattatccttaacatcactttgtgcttcatccacaaaatccggatcaaattc |
118 |
Q |
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| T |
34562602 |
ccttacacaattcaaatttcttcactttcaatttcacttcatcatttgaattatccttaacatcactttgtgcttcatccacaaaatccggatcaaattc |
34562701 |
T |
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| Q |
119 |
accaacctcaaactcatcagacattgtgccatcctcattcagaacccctaatttcttaattttcacggtctctg |
192 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| |
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| T |
34562702 |
accaacctcaaactcatcagacattgttccatcctcattcagaacccctgatttcttaattttcacggtttctg |
34562775 |
T |
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