View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1141_low_3 (Length: 808)

Name: NF1141_low_3
Description: NF1141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1141_low_3
NF1141_low_3
[»] chr3 (9 HSPs)
chr3 (131-730)||(16345391-16345991)
chr3 (30-168)||(5553462-5553600)
chr3 (30-199)||(17236867-17237030)
chr3 (30-133)||(22271157-22271262)
chr3 (52-112)||(16347198-16347259)
chr3 (52-112)||(47418036-47418097)
chr3 (34-111)||(13956996-13957070)
chr3 (34-111)||(15381933-15382007)
chr3 (34-111)||(15387669-15387743)
[»] chr1 (8 HSPs)
chr1 (30-730)||(22062168-22062869)
chr1 (30-241)||(20126987-20127199)
chr1 (30-169)||(6473763-6473902)
chr1 (166-388)||(6473155-6473377)
chr1 (30-161)||(24157080-24157210)
chr1 (34-164)||(20190459-20190588)
chr1 (52-115)||(40554445-40554509)
chr1 (52-110)||(48463137-48463195)
[»] chr6 (10 HSPs)
chr6 (30-605)||(18781305-18781881)
chr6 (73-388)||(20417683-20417998)
chr6 (30-201)||(30518308-30518480)
chr6 (30-201)||(20414929-20415100)
chr6 (30-201)||(20419662-20419833)
chr6 (30-201)||(18553296-18553465)
chr6 (30-136)||(20417576-20417682)
chr6 (171-388)||(2147982-2148199)
chr6 (55-180)||(6230684-6230808)
chr6 (52-112)||(2147847-2147908)
[»] chr2 (10 HSPs)
chr2 (484-730)||(23736003-23736249)
chr2 (30-201)||(6050246-6050419)
chr2 (30-166)||(15409791-15409927)
chr2 (34-201)||(33809331-33809492)
chr2 (316-468)||(15408956-15409106)
chr2 (52-115)||(44792884-44792948)
chr2 (52-112)||(24808197-24808258)
chr2 (270-306)||(15725140-15725176)
chr2 (52-91)||(31939075-31939114)
chr2 (171-276)||(1003138-1003243)
[»] scaffold0083 (1 HSPs)
scaffold0083 (34-337)||(33036-33341)
[»] chr4 (11 HSPs)
chr4 (30-337)||(34098541-34098847)
chr4 (30-388)||(17266721-17267083)
chr4 (30-164)||(9167179-9167313)
chr4 (30-166)||(15019306-15019442)
chr4 (30-166)||(15017666-15017802)
chr4 (30-161)||(39488173-39488304)
chr4 (48-207)||(17780664-17780826)
chr4 (55-185)||(23090869-23090998)
chr4 (68-134)||(19460135-19460201)
chr4 (52-118)||(19180483-19180550)
chr4 (52-112)||(19459912-19459973)
[»] scaffold0010 (2 HSPs)
scaffold0010 (30-241)||(136673-136885)
scaffold0010 (286-469)||(136383-136565)
[»] scaffold0075 (2 HSPs)
scaffold0075 (30-244)||(25784-25999)
scaffold0075 (304-469)||(26123-26286)
[»] scaffold0076 (1 HSPs)
scaffold0076 (30-253)||(54676-54899)
[»] chr8 (2 HSPs)
chr8 (30-201)||(20730831-20731002)
chr8 (52-112)||(23015809-23015870)
[»] chr5 (6 HSPs)
chr5 (29-201)||(4568208-4568380)
chr5 (30-165)||(244464-244599)
chr5 (30-164)||(29950111-29950245)
chr5 (30-164)||(29951749-29951883)
chr5 (229-278)||(34596705-34596754)
chr5 (73-118)||(34597760-34597804)
[»] chr7 (6 HSPs)
chr7 (30-201)||(32706295-32706467)
chr7 (30-164)||(9595460-9595594)
chr7 (30-164)||(9646423-9646557)
chr7 (52-203)||(5247437-5247589)
chr7 (34-111)||(14575589-14575663)
chr7 (34-111)||(14578865-14578939)
[»] scaffold0017 (3 HSPs)
scaffold0017 (30-201)||(4617-4788)
scaffold0017 (316-469)||(93-247)
scaffold0017 (316-417)||(4893-4995)
[»] scaffold0585 (1 HSPs)
scaffold0585 (30-200)||(896-1065)
[»] scaffold0146 (3 HSPs)
scaffold0146 (30-199)||(6576-6743)
scaffold0146 (30-199)||(9471-9638)
scaffold0146 (30-199)||(17138-17305)
[»] scaffold0254 (2 HSPs)
scaffold0254 (171-388)||(24445-24662)
scaffold0254 (52-112)||(24311-24372)
[»] scaffold0096 (1 HSPs)
scaffold0096 (30-122)||(22638-22730)
[»] scaffold0269 (1 HSPs)
scaffold0269 (94-164)||(1490-1560)
[»] scaffold0180 (1 HSPs)
scaffold0180 (52-112)||(10850-10911)
[»] scaffold0139 (1 HSPs)
scaffold0139 (52-112)||(6465-6526)
[»] scaffold0018 (1 HSPs)
scaffold0018 (52-112)||(141-202)
[»] scaffold0002 (1 HSPs)
scaffold0002 (52-112)||(374790-374851)
[»] scaffold0062 (1 HSPs)
scaffold0062 (270-306)||(73693-73729)
[»] scaffold0025 (1 HSPs)
scaffold0025 (52-112)||(55425-55486)
[»] scaffold0013 (1 HSPs)
scaffold0013 (52-112)||(241614-241675)


Alignment Details
Target: chr3 (Bit Score: 539; Significance: 0; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 539; E-Value: 0
Query Start/End: Original strand, 131 - 730
Target Start/End: Original strand, 16345391 - 16345991
Alignment:
Q  131 atacacatatgtgtaaaattctataaaattcaaccttttct--atttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtca 228  Q
    |||||||||||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  16345391 atacacatatgtgtaaaattctataaaattcaactttttttttatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggacc 16345490  T
Q  229 ctaataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagccttacaattattctaaaaataaatcactaaaactattctt 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||    
T  16345491 ctaataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactaaccttacaattattctaaaaataaaacactaaaattattctt 16345590  T
Q  329 tgagaattaacatgacttatttgttatgttcattttcaattgataaaaactgctccaaataaattccaaaaccgttgcaagctgccacctttaagtgtag 428  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16345591 tgagaattaacgtgacttatttgttatcttcattttcaattgataaaaactgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtag 16345690  T
Q  429 taattactatcaagctgccacatttaattctaaaaccgttatgaaccagcctcatttatcttcattggaattgacctgaatggttgtgacatttaaaaat 528  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16345691 taattactatcaagctgccacatttaattctaaaaccgttatgaaccagcctcatttatcttcattggaattgacctgaatggttgtgacatttaaaaat 16345790  T
Q  529 cacgttttgtttggtctttggtgagctagtaccaggaatcaaaataattctctactttggaaacaataaaaaccaacgaaattgtcccttgagcagcttg 628  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16345791 cacgttttgtttggtctttggtgagctagtaccaggaatcaaaataattctctactttggaaacaataaaaaccaac-aaattgtcccttgagcagcttg 16345889  T
Q  629 tgacttagtactccacttcatgtatcaaattatgcaatgatgaatcatagagatttaagccatgaatcttcaattagttaataccaaagcagtgagaata 728  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16345890 tgacttagtactccacttgatgtatcaaattatgcaatgatgaatcatagagatttaagccatgaatcttcaattagttaataccaaagcagtgagaata 16345989  T
Q  729 at 730  Q
    ||    
T  16345990 at 16345991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 5553600 - 5553462
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  5553600 aaagtgataagtctatgtatgcgaggatcgccacaagaaatatgatttcttgataagatcaatgatggttcaatccagaaccacaagagataaagctctc 5553501  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttt 168  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5553500 aatacacatatgtgtaaaattctataaaattcaaccttt 5553462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 30 - 199
Target Start/End: Original strand, 17236867 - 17237030
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||| ||| |||||||||||||||||||||||| |||||| |||||||||       |||||||| |||||||||||||||||||| |||||    
T  17236867 aaagtgataagtttatcgatgcgaggatcgccacaagaaatgtgattttttgataagaa------tggttcaaaccagaaccacaagagacaaaactctc 17236960  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatag 199  Q
     ||||||||| ||||||||||||| |||||||||| | || ||||||||| ||||||||||||| |||||    
T  17236961 gatacacataagtgtaaaattctacaaaattcaacttgttttatttcataaagaaacttacaatatatag 17237030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 30 - 133
Target Start/End: Complemental strand, 22271262 - 22271157
Alignment:
Q  30 aaagtgataagtctatggatgcgag--gatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctc 127  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||| |||    
T  22271262 aaagtgataagtctatggatgcgagatgatcgccacaagaaatgtgatttcttgataagatcaatgatggttcaatccagaaccacaagagacaaaactc 22271163  T
Q  128 tcaata 133  Q
    ||||||    
T  22271162 tcaata 22271157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 16347259 - 16347198
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  16347259 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 16347198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 47418036 - 47418097
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  47418036 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 47418097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 13956996 - 13957070
Alignment:
Q  34 tgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaacc 111  Q
    ||||||| |||||||||  |||||| |||||||||| | ||||||||||||||||||   ||||| ||||||||||||    
T  13956996 tgataagcctatggatg--aggatcaccacaagaaa-aggatttcttgataagatcagttttggtccaatccagaacc 13957070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 15382007 - 15381933
Alignment:
Q  34 tgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaacc 111  Q
    ||||||| |||||||||  |||||| |||||||||| | ||||||||||||||||||   ||||| ||||||||||||    
T  15382007 tgataagcctatggatg--aggatcaccacaagaaa-aggatttcttgataagatcagttttggtccaatccagaacc 15381933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 15387743 - 15387669
Alignment:
Q  34 tgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaacc 111  Q
    ||||||| |||||||||  |||||| |||||||||| | ||||||||||||||||||   ||||| ||||||||||||    
T  15387743 tgataagcctatggatg--aggatcaccacaagaaa-aggatttcttgataagatcagttttggtccaatccagaacc 15387669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 538; Significance: 0; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 538; E-Value: 0
Query Start/End: Original strand, 30 - 730
Target Start/End: Original strand, 22062168 - 22062869
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062168 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 22062267  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtcac 229  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||  ||||||||||||||||||||| |||| |  ||  | ||||| || |||    
T  22062268 aatacacatatgtgtaaaattctataaaattcaacttcctttatttcataatgaaacttacaatttatagagctcttgctctaatgaactcaaaggacac 22062367  T
Q  230 taataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagccttacaattattctaaaaataaatcactaaaactattcttt 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||||||||    
T  22062368 taataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagcctttaaattattctaaaaataaaacactaaaattattcttt 22062467  T
Q  330 gagaattaacatgacttatttgttatgttcattttcaattgataaaaactgctccaaataaattccaaaaccgttgcaagctgccacctttaagtgtagt 429  Q
    |  ||||| | ||| ||   | |||| ||||||| |||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22062468 ggaaattagcgtgagttgcatattatcttcatttccaattgatgaaagctgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtagt 22062567  T
Q  430 aattactatcaagctgccacattt-aattctaaaaccgttatgaaccagcctcatttatcttcattggaattgacctgaatggttgtgacatttaaaaat 528  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  22062568 aattactatcaagctgccacattttaattctaaaaccgttatgaaccagccccatttatcttcattgaaattgacctgaatgattgtgacatttaaaaat 22062667  T
Q  529 cacgttttgtttggtctttggtgagctagtaccaggaatcaaaataattctctactttggaaacaataaaaaccaacgaaattgtcccttgagcagcttg 628  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062668 cacgttttatttggtctttggtgagctagtaccaggaatcaaaataattctctactttggaaacaataaaaaccaacgaaattgtcccttgagcagcttg 22062767  T
Q  629 tgacttagtactccacttcatgtatcaaattatgcaatgatgaatcatagagatttaagccatgaatcttcaattagttaataccaaagcagtgagaata 728  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22062768 tgacttaatactccacttcatgtatcaaattatgcaatgatgaatcatagagatttaagccatgaatcttcaattagttaatatcaaagcagtgagaata 22062867  T
Q  729 at 730  Q
    ||    
T  22062868 at 22062869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 30 - 241
Target Start/End: Complemental strand, 20127199 - 20126987
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20127199 aaagcgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctc 20127100  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttct-atttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtca 228  Q
    ||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  20127099 aatacacatatgtgtaaaattctataatattcaactttttttcatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggacc 20127000  T
Q  229 ctaataaattaaa 241  Q
    |||||||||||||    
T  20126999 ctaataaattaaa 20126987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 30 - 169
Target Start/End: Complemental strand, 6473902 - 6473763
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||    
T  6473902 aaagtgataagtctatggatgcgaggatcgtcacaagaaatgtgatttcttgataagatcaaggatgattcaatccagaaccacaagagacaaggctctc 6473803  T
Q  130 aatacacatatgtgtaaaattctataaaattcaacctttt 169  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  6473802 aatacacatatgtgtaaaattctataaaattcaacttttt 6473763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 166 - 388
Target Start/End: Complemental strand, 6473377 - 6473155
Alignment:
Q  166 ttttctatttcatagagaaacttacaatttatagagcacttgttgcaa-gtatctcaatggtcactaataaattaaaatacacctaatattattctaaag 264  Q
    |||| |||||||||  ||||||||||||||||||||| |||| |  || ||| ||||| || |||||||||||||||||||||||||||||| |||||||    
T  6473377 ttttttatttcataatgaaacttacaatttatagagctcttgctctaatgta-ctcaaaggacactaataaattaaaatacacctaatattagtctaaag 6473279  T
Q  265 aaaagaaataaatgacatactagccttacaattattctaaaaataaatcactaaaactattctttgagaattaacatgacttatttgttatgttcatttt 364  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| | ||| ||   | |||| ||||||||    
T  6473278 aaaagaaataaatgacatactagccttacaattattctaaaaataaaacactaaaattattctttgaaaattagcgtgagttgcatattatcttcatttt 6473179  T
Q  365 caattgataaaaactgctccaaat 388  Q
    |||||||| ||| |||||| ||||    
T  6473178 caattgatgaaagctgctcaaaat 6473155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 24157080 - 24157210
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  24157080 aaagtgataagtcaatggatgcgaggatcaccacaagaaa-atgatttcttgataagatcaaggatggttcgatccataaccacaagagacaaagctctc 24157178  T
Q  130 aatacacatatgtgtaaaattctataaaattc 161  Q
    ||||||||||||||||||||||||||||||||    
T  24157179 aatacacatatgtgtaaaattctataaaattc 24157210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 20190459 - 20190588
Alignment:
Q  34 tgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctcaata 133  Q
    ||||||||||||||| |||||||| ||||||||||  || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  20190459 tgataagtctatggaagcgaggattgccacaagaac-ataatgtcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctcaata 20190557  T
Q  134 cacatatgtgtaaaattctataaaattcaac 164  Q
    |||||| ||||||||||||| ||| ||||||    
T  20190558 cacataagtgtaaaattctacaaagttcaac 20190588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 40554509 - 40554445
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaaccacaa 115  Q
    ||||||||||||||||||  || ||||||||||||||||| |  |||||||||||||||||||||    
T  40554509 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaaccacaa 40554445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 48463195 - 48463137
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaac 110  Q
    |||||||| |||||||||  || |||||||||||||||||   ||||||||||||||||    
T  48463195 gaggatcgtcacaagaaacgtggtttcttgataagatcaataatggttcaatccagaac 48463137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 537; Significance: 0; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 537; E-Value: 0
Query Start/End: Original strand, 30 - 605
Target Start/End: Complemental strand, 18781881 - 18781305
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18781881 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 18781782  T
Q  130 aatacacatatgtgtaaaattctataaaattcaacctttt-ctatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtca 228  Q
    ||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18781781 aatacacatatgtgtaaaattctataatattcaacttttttctatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggaca 18781682  T
Q  229 ctaataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagccttacaattattctaaaaataaatcactaaaactattctt 328  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18781681 ctaataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagccttacaattattctaaaaataaatcactaaaattattctt 18781582  T
Q  329 tgagaattaacatgacttatttgttatgttcattttcaattgataaaaactgctccaaataaattccaaaaccgttgcaagctgccacctttaagtgtag 428  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18781581 tgagaattaacgtgacttatttgttatcttcattttcaattgataaaaactgctccaaacaaattccaaaaccgttgcaagctgccacctttaagtgtag 18781482  T
Q  429 taattactatcaagctgccacatttaattctaaaaccgttatgaaccagcctcatttatcttcattggaattgacctgaatggttgtgacatttaaaaat 528  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18781481 taattactatcaaactgccacatttaattctaaaaccgttatgaaccagcctcatttatcttcattggaattgacctgaatggttgtgacatttaaaaat 18781382  T
Q  529 cacgttttgtttggtctttggtgagctagtaccaggaatcaaaataattctctactttggaaacaataaaaaccaac 605  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18781381 cacgttttgtttggtctttggtgagctagtaccaggaatcaaaataattctctactttggaaacaataaaaaccaac 18781305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 73 - 388
Target Start/End: Original strand, 20417683 - 20417998
Alignment:
Q  73 gatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctcaatacacatatgtgtaaaattctataaaattcaaccttttcta 172  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  20417683 gatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaggctctcaatacacatatgtgtaaaattctataaaattcaactttttcta 20417782  T
Q  173 tttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtcactaataaattaaaatacacctaatattattctaaagaaaagaaa 272  Q
    |||||||  ||||||||||||||||||||| |||| |  ||  | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||    
T  20417783 tttcataatgaaacttacaatttatagagctcttgctctaatgaactcaaaggacactaataaattaaaatacacctaatattattctaaagaaaagaaa 20417882  T
Q  273 taaatgacatactagccttacaattattctaaaaataaatcactaaaactattctttgagaattaacatgacttatttgttatgttcattttcaattgat 372  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| | ||| ||   | |||| ||||||| ||||||||    
T  20417883 taaatgacatactagccttacaattattctaaaaataaaacactaaaattattctttgaaaattagcgtgagttgcatattattttcatttccaattgat 20417982  T
Q  373 aaaaactgctccaaat 388  Q
     ||| |||||| ||||    
T  20417983 gaaagctgctcaaaat 20417998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 30518308 - 30518480
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  30518308 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctc 30518407  T
Q  130 aatacacatatgtgtaaaattctataaaattcaacc-ttttctatttcatagagaaacttacaatttatagag 201  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||| |||||||||||||||    
T  30518408 aatacacatatgtgtaaaattctataatattcaacctttttttatttcatagagaaagttacaatttatagag 30518480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 20414929 - 20415100
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20414929 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaggctctc 20415028  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagag 201  Q
    |||||||||||||||||||||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  20415029 aatacacatatgtgtaaaattctataaaattcaactccctttatttcatagagaaacttacaatttatagag 20415100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 20419662 - 20419833
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  20419662 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaagactctc 20419761  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagag 201  Q
    |||||||||||||||||||||||||||||||||||    | |||||||||||||||||||||||||||||||    
T  20419762 aatacacatatgtgtaaaattctataaaattcaactccctttatttcatagagaaacttacaatttatagag 20419833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 18553465 - 18553296
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18553465 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaggctctc 18553366  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagag 201  Q
    |||||||  |||||||||||||||||||||||||| | |  ||||||||||||||| |||||||||||||||    
T  18553365 aatacac--atgtgtaaaattctataaaattcaacttatcttatttcatagagaaagttacaatttatagag 18553296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 20417576 - 20417682
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20417576 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaggctctc 20417675  T
Q  130 aatacac 136  Q
    |||||||    
T  20417676 aatacac 20417682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 171 - 388
Target Start/End: Original strand, 2147982 - 2148199
Alignment:
Q  171 tatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtcactaataaattaaaatacacctaatattattctaaagaaaaga 270  Q
    |||||||||  ||||||||||||| ||||||| |||| |  ||  | ||||| || |||||||||||||||||||||||| |||||||||||||||||||    
T  2147982 tatttcataatgaaacttacaattcatagagctcttgctctaatgaactcaaaggacactaataaattaaaatacacctagtattattctaaagaaaaga 2148081  T
Q  271 aataaatgacatactagccttacaattattctaaaaataaatcactaaaactattctttgagaattaacatgacttatttgttatgttcattttcaattg 370  Q
    |||||||||||||||| ||||||||||||||||||| |||| || ||||| |||||||||| ||||| | ||| ||   | |||| ||||||| ||||||    
T  2148082 aataaatgacatactaaccttacaattattctaaaattaaaacattaaaattattctttgaaaattagcgtgaattgcatattattttcatttccaattg 2148181  T
Q  371 ataaaaactgctccaaat 388  Q
    || ||| |||||| ||||    
T  2148182 atgaaagctgctcaaaat 2148199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 6230684 - 6230808
Alignment:
Q  55 gatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctcaatacacatatgtgtaaaattctat 154  Q
    |||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||     
T  6230684 gatcgccataagaaatgtgatttcttgataagatcaaggatggttcaatccagaaccacaagagtcaaaactctcaatacacatatgtgtaaaattctac 6230783  T
Q  155 aaaattcaaccttttctatttcatag 180  Q
    ||||||||| ||||| ||||||||||    
T  6230784 aaaattcaa-cttttttatttcatag 6230808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 2147847 - 2147908
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  2147847 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 2147908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 484 - 730
Target Start/End: Original strand, 23736003 - 23736249
Alignment:
Q  484 ttatcttcattggaattgacctgaatggttgtgacatttaaaaatcacgttttgtttggtctttggtgagctagtaccaggaatcaaaataattctctac 583  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  23736003 ttatcttcattggaattgacctgattgattgtgacatttaaaaatcacgttttatttggtctttggtgagctagtaccaggaatcaaaataattctttac 23736102  T
Q  584 tttggaaacaataaaaaccaacgaaattgtcccttgagcagcttgtgacttagtactccacttcatgtatcaaattatgcaatgatgaatcatagagatt 683  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  23736103 tttggaaacaataaaaaccaacgaaattgtcccttgaccagcttgtgacttaatactccacttcatgtatcaaattatgaaatgatgaatcatagagatt 23736202  T
Q  684 taagccatgaatcttcaattagttaataccaaagcagtgagaataat 730  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  23736203 taagccatgaatcttcaattagttaataccaaagcagtgagaataat 23736249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 6050246 - 6050419
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  6050246 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctt 6050345  T
Q  130 aatacacatatgtgtaaaattctataaaattcaac--cttttctatttcatagagaaacttacaatttatagag 201  Q
    ||||||||||||||||||||||||||| |||||||   |||| ||||||||||| ||| |||||||||||||||    
T  6050346 aatacacatatgtgtaaaattctataatattcaactttttttttatttcatagaaaaagttacaatttatagag 6050419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 30 - 166
Target Start/End: Complemental strand, 15409927 - 15409791
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15409927 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctc 15409828  T
Q  130 aatacacatatgtgtaaaattctataaaattcaacct 166  Q
    ||||||||||||||||||||||||||| |||||||||    
T  15409827 aatacacatatgtgtaaaattctataatattcaacct 15409791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 34 - 201
Target Start/End: Complemental strand, 33809492 - 33809331
Alignment:
Q  34 tgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctcaata 133  Q
    ||||||| | ||||||||||||||||||||||||||    ||||      ||||| |||| |||||  ||||| |||||||||||||||  ||||||| |    
T  33809492 tgataagccgatggatgcgaggatcgccacaagaaaagaaattt------aagattaaggatggtttgatccaaaaccacaagagacaagactctcaaca 33809399  T
Q  134 cacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagag 201  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||| |||||||| ||||||||||    
T  33809398 cacatatgtgtaaaattctataaaattcaacttattttatttcatagaaaaacttacgatttatagag 33809331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 316 - 468
Target Start/End: Complemental strand, 15409106 - 15408956
Alignment:
Q  316 taaaactattctttgagaattaacatgacttatttgttatgttcattttcaattgataaaaactgctccaaataaattccaaaaccgttgcaagctgcca 415  Q
    ||||| |||||||||| |||| || ||||||  ||||||| ||| ||| ||||||||| || |||||||| | |||||||||||| | ||||||||||||    
T  15409106 taaaattattctttgataattcacgtgacttgcttgttatcttcttttccaattgatagaatctgctccatacaaattccaaaactgctgcaagctgcca 15409007  T
Q  416 cctttaagtgtagtaattactatcaagctgcca-catttaattctaaaaccgtt 468  Q
    || |||| |   | |||||||||||| |||||| | ||||||||||||||||||    
T  15409006 ccattaaat---gcaattactatcaaactgccatcttttaattctaaaaccgtt 15408956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 44792884 - 44792948
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaaccacaa 115  Q
    ||||||||||||||||||  || ||||||||||||||||| |  |||||||||||||||||||||    
T  44792884 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaaccacaa 44792948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 24808197 - 24808258
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  24808197 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 24808258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 15725140 - 15725176
Alignment:
Q  270 aaataaatgacatactagccttacaattattctaaaa 306  Q
    |||||||||||||| ||||||||||||||||||||||    
T  15725140 aaataaatgacatattagccttacaattattctaaaa 15725176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 31939114 - 31939075
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa 91  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  31939114 gaggatcgccacaagaaacatggtttcttgataagatcaa 31939075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 276
Target Start/End: Complemental strand, 1003243 - 1003138
Alignment:
Q  171 tatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtcactaataaattaaaatacacctaatattattctaaagaaaaga 270  Q
    ||||||| | ||||| ||| |||||||||||| |||| |  ||  | ||||| || | ||||||||| |||| |||| |||||||| ||||||||||| |    
T  1003243 tatttcacaaagaaatttataatttatagagctcttgctctaatgaactcaaaggaccctaataaataaaaacacacttaatattaatctaaagaaaaca 1003144  T
Q  271 aataaa 276  Q
    ||||||    
T  1003143 aataaa 1003138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 34 - 337
Target Start/End: Complemental strand, 33341 - 33036
Alignment:
Q  34 tgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctcaata 133  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33341 tgataagtctatggatgcgaggatcgccacaagaaa-ataatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctcaata 33243  T
Q  134 cacatatgtgtaaaattctataaaattcaacct---tttctatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtcact 230  Q
    |||||||||||||||||||| |||||||||| |   ||| |||||||||  ||||||||||||||||||||| |||| |  ||  | ||||| || ||||    
T  33242 cacatatgtgtaaaattctacaaaattcaacttctctttttatttcataatgaaacttacaatttatagagctcttgctctaatgaactcaaaggacact 33143  T
Q  231 aataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagccttacaattattctaaaaataaatcactaaaactattctttg 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  33142 aataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagccttacaattattctaaaaataaaacactaaaattattctttg 33043  T
Q  331 agaatta 337  Q
    | |||||    
T  33042 aaaatta 33036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 208; Significance: 1e-113; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 30 - 337
Target Start/End: Complemental strand, 34098847 - 34098541
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  34098847 aaagtgataagtctatagatgcgaggatcgccacaagaaa-ataatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagttctc 34098749  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtcac 229  Q
    |||||||||| |||||||||||||||||||||||| || | |||||||||  ||||||||||||||||||||| |||| |  ||  | ||||| || |||    
T  34098748 aatacacataagtgtaaaattctataaaattcaactttctttatttcataatgaaacttacaatttatagagctcttgctctaatgaactcaaaggacac 34098649  T
Q  230 taataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagccttacaattattctaaaaataaatcactaaaactattcttt 329  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  34098648 taataaattaaaatacacctaatattgttctaaagaaaagaaataaatgacatactagccttacaattattctaaaaataaaacactaaaattattcttt 34098549  T
Q  330 gagaatta 337  Q
    || |||||    
T  34098548 gaaaatta 34098541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 30 - 388
Target Start/End: Original strand, 17266721 - 17267083
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaa-tatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctct 128  Q
    ||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17266721 aaagtgataagtctatggatgcgaggatcaccacaagaaaatctgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctct 17266820  T
Q  129 caatacacatatgtgtaaaattctataaaattcaacct---tttctatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatgg 225  Q
    ||||||||||||||||||||||||| |||||||||| |   ||| |||||||||  ||||||||||||||||||||| |||| |  ||  | ||||| ||    
T  17266821 caatacacatatgtgtaaaattctacaaaattcaacttctctttttatttcataatgaaacttacaatttatagagctcttgctctaatgaactcaaagg 17266920  T
Q  226 tcactaataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagccttacaattattctaaaaataaatcactaaaactatt 325  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||||    
T  17266921 acactaataaattaaaatacacctaatattattctaaagaaaagaaataaatgacatactagcctttaaattattctaaaaataaaacactaaaattatt 17267020  T
Q  326 ctttgagaattaacatgacttatttgttatgttcattttcaattgataaaaactgctccaaat 388  Q
    |||||| ||||| | ||| ||   | |||| ||||||| |||||||| ||| |||||| ||||    
T  17267021 ctttgaaaattagcgtgaattgcatattatcttcatttccaattgatgaaagctgctcaaaat 17267083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 9167313 - 9167179
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9167313 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 9167214  T
Q  130 aatacacatatgtgtaaaattctataaaattcaac 164  Q
    |||||||||||||||||||||||||||||||||||    
T  9167213 aatacacatatgtgtaaaattctataaaattcaac 9167179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 15019306 - 15019442
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15019306 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctc 15019405  T
Q  130 aatacacatatgtgtaaaattctataaaattcaacct 166  Q
    ||||||||||||||||||||||||||| |||||||||    
T  15019406 aatacacatatgtgtaaaattctataatattcaacct 15019442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 30 - 166
Target Start/End: Original strand, 15017666 - 15017802
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15017666 aaagtgataagtctatggatgcgaggatcgccataagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctc 15017765  T
Q  130 aatacacatatgtgtaaaattctataaaattcaacct 166  Q
    ||||||||||||||||||||||||||| |||||||||    
T  15017766 aatacacatatgtgtaaaattctataatattcaacct 15017802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 39488173 - 39488304
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  39488173 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatgattcaatccagaaccacaagagacaaagctctc 39488272  T
Q  130 aatacacatatgtgtaaaattctataaaattc 161  Q
    ||||||||||||||||||||||||||||||||    
T  39488273 aatacacatatgtgtaaaattctataaaattc 39488304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 17780826 - 17780664
Alignment:
Q  48 atgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttc----aatccagaaccacaagagacaaagctctcaatacacatatgtg 143  Q
    |||| |||||||||||||||||| |||||||||||||| ||||| | | ||||    |||||| |||||||||||| | |||||||||||||||||||||    
T  17780826 atgcaaggatcgccacaagaaatgtgatttcttgataaaatcaaagatagttcgatcaatccataaccacaagaga-agagctctcaatacacatatgtg 17780728  T
Q  144 taaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagagcacttg 207  Q
    ||||||| ||||||||||||| |  |  ||||||| |||||||||||||| |||||||| ||||    
T  17780727 taaaattgtataaaattcaacttccttcatttcattgagaaacttacaatatatagagctcttg 17780664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 55 - 185
Target Start/End: Original strand, 23090869 - 23090998
Alignment:
Q  55 gatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctcaatacacatatgtgtaaaattctat 154  Q
    ||||||||||||||| |  |||| ||||||||||||||| || ||||||| | |||| |||||||||||||| ||||||||||||||| |||||||||||    
T  23090869 gatcgccacaagaaa-agaatttattgataagatcaaggatgattcaatctaaaaccgcaagagacaaagctatcaatacacatatgtataaaattctat 23090967  T
Q  155 aaaattcaaccttttctatttcatagagaaa 185  Q
    |||||| ||| | || |||||||||||||||    
T  23090968 aaaatttaacttattttatttcatagagaaa 23090998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 134
Target Start/End: Complemental strand, 19460201 - 19460135
Alignment:
Q  68 aatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctcaatac 134  Q
    |||||||||||||||||||||||||  | ||||||| || ||||||||| |||||| |||| |||||    
T  19460201 aatatgatttcttgataagatcaagaatagttcaattcataaccacaagggacaaaactcttaatac 19460135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 118
Target Start/End: Original strand, 19180483 - 19180550
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatc-aaggttggttcaatccagaaccacaagag 118  Q
    ||||||||||||||||||  || ||||||||||||||| ||  ||||| ||||||||||||| |||||    
T  19180483 gaggatcgccacaagaaacgtggtttcttgataagatcaaaatttggtccaatccagaaccaaaagag 19180550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 19459973 - 19459912
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatc-aaggttggttcaatccagaacca 112  Q
    |||||||||||||||||| ||| |||||| |||||||| ||| ||||||||||  |||||||    
T  19459973 gaggatcgccacaagaaacatgctttctttataagatcaaagtttggttcaatttagaacca 19459912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 177; Significance: 5e-95; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 30 - 241
Target Start/End: Complemental strand, 136885 - 136673
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  136885 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggtttaatccagaaccacaagagacaaagctctc 136786  T
Q  130 aatacacatatgtgtaaaattctataaaattcaac-cttttctatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtca 228  Q
    ||||||||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     
T  136785 aatacacatatgtgtaaaattctataatattcaacttttttttatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggacc 136686  T
Q  229 ctaataaattaaa 241  Q
    |||||||||||||    
T  136685 ctaataaattaaa 136673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 286 - 469
Target Start/End: Complemental strand, 136565 - 136383
Alignment:
Q  286 agccttacaattattc-taaaaataaatcactaaaactattctttgagaattaacatgacttatttgttatgttcattttcaattgataaaaactgctcc 384  Q
    |||||||||||||||  | |||||||| || ||||| | ||||||| || ||||| |||||   ||||||| |||||||||||||||||||| |||  ||    
T  136565 agccttacaattattaattaaaataaagcaataaaattgttctttgggatttaacgtgactagcttgttatcttcattttcaattgataaaagctggccc 136466  T
Q  385 aaataaattccaaaaccgttgcaagctgccacctttaagtgtagtaattactatcaagctgccacattt-aattctaaaaccgtta 469  Q
    ||| || |||   ||| | ||||||||||| ||||||| |   |||||||||||||||||||| | ||| ||||||||||||||||    
T  136465 aaacaacttctgtaactgctgcaagctgcctcctttaaat---gtaattactatcaagctgcctcctttcaattctaaaaccgtta 136383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 164; Significance: 3e-87; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 30 - 244
Target Start/End: Original strand, 25784 - 25999
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25784 aaagtgataagtatatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaactacaagagacaaagctctc 25883  T
Q  130 aatacacatatgtgtaaaattctataaaattcaacct-tttctatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtca 228  Q
    | ||||||||||||||||||||||||||||||||| | ||| |||||||||   ||||||||||||||||||| ||||||||||||||||||||||| |     
T  25884 actacacatatgtgtaaaattctataaaattcaacttctttttatttcataataaaacttacaatttatagagtacttgttgcaagtatctcaatggacc 25983  T
Q  229 ctaataaattaaaata 244  Q
    ||||||||||||||||    
T  25984 ctaataaattaaaata 25999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 304 - 469
Target Start/End: Original strand, 26123 - 26286
Alignment:
Q  304 aaaataaatcactaaaactattctttgagaattaacatgacttatttgttatgttcattttcaattgataaaaactgctccaaataaattccaaaaccgt 403  Q
    |||||||| || ||||| | ||||||| || ||||| |||||   ||||||| ||||||| |||||||||||| |||  ||||| ||||||  |||| |     
T  26123 aaaataaagcaataaaattgttctttgggatttaacgtgactagcttgttatcttcatttccaattgataaaagctggcccaaaaaaattctgaaactgc 26222  T
Q  404 tgcaagctgccacctttaagtgtagtaattactatcaagctgccacattt-aattctaaaaccgtta 469  Q
    ||||||||| | |||| || |   |||||||||||||||||||| | ||| ||||||||||||||||    
T  26223 tgcaagctgactccttaaaat---gtaattactatcaagctgcctcctttcaattctaaaaccgtta 26286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 156; Significance: 2e-82; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 30 - 253
Target Start/End: Complemental strand, 54899 - 54676
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  54899 aaagtgataagtctatggatgcgagtatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaggctctc 54800  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtcac 229  Q
    ||||||||||||||||||||||||||||||||||| |  | |||||||||  ||||||||||||||||||||| |||| |  ||  | ||||| || |||    
T  54799 aatacacatatgtgtaaaattctataaaattcaacttcctttatttcataatgaaacttacaatttatagagctcttgctctaatgaactcaaaggacac 54700  T
Q  230 taataaattaaaatacacctaata 253  Q
    ||||||||||||||||||||||||    
T  54699 taataaattaaaatacacctaata 54676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 156; Significance: 2e-82; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 20731002 - 20730831
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20731002 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 20730903  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagag 201  Q
    ||||||||||||||||||||||||||||||||||||| |  ||||||||||||||| |||||||||||||||    
T  20730902 aatacacatatgtgtaaaattctataaaattcaacctatcttatttcatagagaaagttacaatttatagag 20730831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 23015809 - 23015870
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  23015809 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 23015870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 141; Significance: 2e-73; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 29 - 201
Target Start/End: Complemental strand, 4568380 - 4568208
Alignment:
Q  29 aaaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctct 128  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4568380 aaaagtgataagtctatggatgcgaggatcgccacaagaaatatgattttttgataagatcaagaatggttcaatccagaaccacaagagacaaagctct 4568281  T
Q  129 caatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagag 201  Q
    ||||||||||| || ||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||    
T  4568280 caatacacataagtataaaattctataaaattcaactttttttatttcatagagaaagttacaatttatagag 4568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 30 - 165
Target Start/End: Original strand, 244464 - 244599
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  244464 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctc 244563  T
Q  130 aatacacatatgtgtaaaattctataaaattcaacc 165  Q
    ||||||||||||||||||||||||||||||||||||    
T  244564 aatacacatatgtgtaaaattctataaaattcaacc 244599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 29950245 - 29950111
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29950245 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 29950146  T
Q  130 aatacacatatgtgtaaaattctataaaattcaac 164  Q
    ||||||||||||||||||||||||||| |||||||    
T  29950145 aatacacatatgtgtaaaattctataatattcaac 29950111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 29951883 - 29951749
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29951883 aaagtgataagtctatggatgcgaggatcaccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 29951784  T
Q  130 aatacacatatgtgtaaaattctataaaattcaac 164  Q
    ||||||||||||||||||||||||||| |||||||    
T  29951783 aatacacatatgtgtaaaattctataatattcaac 29951749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 34596754 - 34596705
Alignment:
Q  229 ctaataaattaaaatacacctaatattattctaaagaaaagaaataaatg 278  Q
    |||||||||||||| ||||||||||||| ||||| ||||| |||||||||    
T  34596754 ctaataaattaaaagacacctaatattactctaaggaaaacaaataaatg 34596705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 34597804 - 34597760
Alignment:
Q  73 gatttcttgataagatcaaggttggttcaatccagaaccacaagag 118  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||    
T  34597804 gatttcttgataagat-aaggatggttcaatccagaaccacaagag 34597760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 1e-68; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 30 - 201
Target Start/End: Complemental strand, 32706467 - 32706295
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||     
T  32706467 aaagtgataagtctatagatgcgaggattgccacaagaaatgtgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctt 32706368  T
Q  130 aatacacatatgtgtaaaattctataaaattcaacct-tttctatttcatagagaaacttacaatttatagag 201  Q
    ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| |||||||||||||||    
T  32706367 aatacacatatgtgtaaaattctataaaattcaacttctttttatttcatagagaaagttacaatttatagag 32706295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 9595460 - 9595594
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9595460 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctc 9595559  T
Q  130 aatacacatatgtgtaaaattctataaaattcaac 164  Q
    |||||||||||||||||||||||||||||||||||    
T  9595560 aatacacatatgtgtaaaattctataaaattcaac 9595594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 9646423 - 9646557
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9646423 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagctctc 9646522  T
Q  130 aatacacatatgtgtaaaattctataaaattcaac 164  Q
    |||||||||||||||||||||||||||||||||||    
T  9646523 aatacacatatgtgtaaaattctataaaattcaac 9646557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 52 - 203
Target Start/End: Original strand, 5247437 - 5247589
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctcaatacacatatgtgtaaaattc 151  Q
    ||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| || |||| |||||||||||    
T  5247437 gaggatctccacaaaaaatatgatttcttgataagatcaaggatgattcaatccagaaccataagagacaaagctctcaacactcatacgtgtaaaattc 5247536  T
Q  152 tataaaattcaaccttttctatttc-atagagaaacttacaatttatagagca 203  Q
    || | |||||||| | || ||||||  |||  |||||||||||||||||||||    
T  5247537 tacacaattcaacttgttttatttctttaggaaaacttacaatttatagagca 5247589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 14575589 - 14575663
Alignment:
Q  34 tgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaacc 111  Q
    ||||||| |||||||||  |||||| |||||||||| | ||||||||||||||||||   ||||| ||||||||||||    
T  14575589 tgataagcctatggatg--aggatcaccacaagaaa-aggatttcttgataagatcagttttggtccaatccagaacc 14575663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 14578865 - 14578939
Alignment:
Q  34 tgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaacc 111  Q
    ||||||| |||||||||  |||||| |||||||||| | ||||||||||||||||||   ||||| ||||||||||||    
T  14578865 tgataagcctatggatg--aggatcaccacaagaaa-aggatttcttgataagatcagttttggtccaatccagaacc 14578939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 132; Significance: 4e-68; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 4617 - 4788
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4617 aaagtgataagtctatggatgcaaggatcgccgcaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaggctctc 4716  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatagag 201  Q
    ||||||||||||||||||||||||||| ||||||| | |  ||||||||||| ||| |||||||||||||||    
T  4717 aatacacatatgtgtaaaattctataatattcaacttatcttatttcatagaaaaagttacaatttatagag 4788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 316 - 469
Target Start/End: Original strand, 93 - 247
Alignment:
Q  316 taaaactattctttgagaattaacatgacttat-ttgttatgttcattttcaattgataaaaactgctccaaataaattccaaaaccgttgcaagctgcc 414  Q
    ||||| |||||||||| |||| || ||||||   ||||| | ||| ||| ||||||||| || |||||||| | |||||||||||| | |||||||||||    
T  93 taaaattattctttgataattcacgtgactttgcttgttttcttcttttccaattgatagaatctgctccatacaaattccaaaactgctgcaagctgcc 192  T
Q  415 acctttaagtgtagtaattactatcaagctgccaca---tttaattctaaaaccgtta 469  Q
    ||| |||| |   | |||||||||||||||||||||   |||||||||||||||||||    
T  193 accattaaat---gcaattactatcaagctgccacaccttttaattctaaaaccgtta 247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 316 - 417
Target Start/End: Original strand, 4893 - 4995
Alignment:
Q  316 taaaactattctttgagaattaacatgacttat-ttgttatgttcattttcaattgataaaaactgctccaaataaattccaaaaccgttgcaagctgcc 414  Q
    ||||| |||||||||| |||| || ||||||   ||||||| ||| ||| ||||||||| || |||||||| | |||||||||||||| |||||||||||    
T  4893 taaaattattctttgataattcacgtgactttgcttgttatcttcttttccaattgatagaatctgctccatacaaattccaaaaccgctgcaagctgcc 4992  T
Q  415 acc 417  Q
    |||    
T  4993 acc 4995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 123; Significance: 9e-63; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 30 - 200
Target Start/End: Original strand, 896 - 1065
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  896 aaagtgataagtctatggatgagaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaaagttctc 995  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttataga 200  Q
    ||||||||||||||||||||||||||| |||| || |||| || ||||| | |||||||||||| ||||||    
T  996 aatacacatatgtgtaaaattctataatattccacttttttta-ttcattgtgaaacttacaatatataga 1065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 110; Significance: 5e-55; HSPs: 3)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 6743 - 6576
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  6743 aaagtgataagtctatggatgcgaggatcgccacaagaaaaaaaatt-cttgataagatcaagaatggttcaatccaaaaccacaagagacaaagctctc 6645  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatag 199  Q
    |||||||||| ||||||||||||||||||||||| ||| | ||||||||| ||||||||||||| |||||    
T  6644 aatacacataagtgtaaaattctataaaattcaa-cttgtttatttcataaagaaacttacaatatatag 6576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 9638 - 9471
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||  |||||||||||||| |||||||||| |  | |||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  9638 aaagtgataagtcggtggatgcgaggatccccacaagaaa-agaaattcttgataagaacaagaatggttcaatccagaaccacaagagacaaagctctc 9540  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatag 199  Q
    |||||||||| |||||||||||||| |||||||| ||| | ||||||||| ||||||||| ||| |||||    
T  9539 aatacacataagtgtaaaattctatcaaattcaa-cttgtttatttcataaagaaacttaaaatatatag 9471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 30 - 199
Target Start/End: Complemental strand, 17305 - 17138
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaaagctctc 129  Q
    |||||||||||||  |||||||||||||| |||||||||| |  | |||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  17305 aaagtgataagtcggtggatgcgaggatccccacaagaaa-agaaattcttgataagaacaagaatggttcaatccagaaccacaagagacaaagctctc 17207  T
Q  130 aatacacatatgtgtaaaattctataaaattcaaccttttctatttcatagagaaacttacaatttatag 199  Q
    |||||||||| |||||||||||||| |||||||| ||| | ||||||||| ||||||||| ||| |||||    
T  17206 aatacacataagtgtaaaattctatcaaattcaa-cttgtttatttcataaagaaacttaaaatatatag 17138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 94; Significance: 2e-45; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 171 - 388
Target Start/End: Original strand, 24445 - 24662
Alignment:
Q  171 tatttcatagagaaacttacaatttatagagcacttgttgcaagtatctcaatggtcactaataaattaaaatacacctaatattattctaaagaaaaga 270  Q
    |||||||||  ||||||||||||| ||||||| |||| |  ||  | ||||| || |||||||||||||||||||||||| |||||||||||||||||||    
T  24445 tatttcataatgaaacttacaattcatagagctcttgctctaatgaactcaaaggacactaataaattaaaatacacctagtattattctaaagaaaaga 24544  T
Q  271 aataaatgacatactagccttacaattattctaaaaataaatcactaaaactattctttgagaattaacatgacttatttgttatgttcattttcaattg 370  Q
    |||||||||||||||| ||||||||||||||||||| |||| || ||||| |||||||||| ||||| | ||| ||   | |||| ||||||| ||||||    
T  24545 aataaatgacatactaaccttacaattattctaaaattaaaacattaaaattattctttgaaaattagcgtgaattgcatattattttcatttccaattg 24644  T
Q  371 ataaaaactgctccaaat 388  Q
    || ||| |||||| ||||    
T  24645 atgaaagctgctcaaaat 24662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 24311 - 24372
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  24311 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 24372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 30 - 122
Target Start/End: Original strand, 22638 - 22730
Alignment:
Q  30 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggttggttcaatccagaaccacaagagacaa 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22638 aaagtgataagtctatggatgcgaggatcgccacaagaaatatgatttcttgataagatcaaggatggttcaatccagaaccacaagagacaa 22730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 63; Significance: 6e-27; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 94 - 164
Target Start/End: Original strand, 1490 - 1560
Alignment:
Q  94 ttggttcaatccagaaccacaagagacaaagctctcaatacacatatgtgtaaaattctataaaattcaac 164  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  1490 ttggttcaatccagaaccataagagacaaagctctcaatacacataagtgtaaaattctataaaattcaac 1560  T

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Target: scaffold0180 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 10850 - 10911
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  10850 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 10911  T

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Target: scaffold0139 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 6526 - 6465
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  6526 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 6465  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 141 - 202
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  141 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 202  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 374790 - 374851
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  374790 gaggatcgccacaagaaacgtggtttcttgataagatcaatgcatggttcaatccagaacca 374851  T

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Target: scaffold0062 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 73693 - 73729
Alignment:
Q  270 aaataaatgacatactagccttacaattattctaaaa 306  Q
    |||||||||||||| ||||||||||||||||||||||    
T  73693 aaataaatgacatattagccttacaattattctaaaa 73729  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 55486 - 55425
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||||||||||||||  || ||||||||| ||||||| |  ||||||||||||||||||    
T  55486 gaggatcgccacaagaaacgtggtttcttgatgagatcaatgcatggttcaatccagaacca 55425  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 241675 - 241614
Alignment:
Q  52 gaggatcgccacaagaaatatgatttcttgataagatcaa-ggttggttcaatccagaacca 112  Q
    ||||||| ||||||||||  || ||||||||||||||||| |  ||||||||||||||||||    
T  241675 gaggatcaccacaagaaacgtggtttcttgataagatcaacgcatggttcaatccagaacca 241614  T

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